Pregenerated sensors for WWOX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004637Ensembl transcript IDs: ENSMUST00000004756.14, ENSMUST00000109107.3, ENSMUST00000109108.9, ENSMUST00000160862.8
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACTTGGTCACACCAAGCAACCAGCTCAGAGACTCAGATGTCTTTaGCTCCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: GLGHTKQPAQRLRCL*LLWYLRDQAVWPGR Trigger: CCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGGAGGCAAAGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTGACCAAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR CCA 90 bp | CACACCAAGCAACCAGCTCAGAGACTCAGATGTCTTTGCCTCCTCTaGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: HTKQPAQRLRCLCLL*YLRDQAVWPGRYSC Trigger: GCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGGAGGCAAAGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR TCA 90 bp | AGCCATGCTGTGAGTCTGTGTGCGGCTCCCAAGGCGGAGCTCCTGTaGCTGGCTCTCTGCCAACAGGACAATGCTTTGATGAATGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SHAVSLCAAPKAELL*LALCQQDNALMNVH Trigger: ATGAACATTCATCAAAGCATTGTCCTGTTGGCAGAGAGCCAGTCACAGGAGCTCCGCCTTGGGAGCCGCACACAGACTCACAGCATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR GCA 90 bp | TGGAGTAGAAGGGGGTGGGAGCAGACGTGTACATTGAACTGTCAGTaGCGATTGCAAGCCCTGGAAAGCCTCGGGATCGTTTCATTCAGA | + |
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Preference number: 1 (lower is better) Translates to: WSRRGWEQTCTLNCQ*RLQALESLGIVSFR Trigger: TCTGAATGAAACGATCCCGAGGCTTTCCAGGGCTTGCAATCGGCACTGACAGTTCAATGTACACGTCTGCTCCCACCCCCTTCTACTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR TCA 90 bp | ATGACTTTTTATGGAGTAGAAGGGGGTGGGAGCAGACGTGTACATTaGACTGTCAGTGCCGATTGCAAGCCCTGGAAAGCCTCGGGATCG | + |
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Preference number: 1 (lower is better) Translates to: MTFYGVEGGGSRRVH*TVSADCKPWKASGS Trigger: CGATCCCGAGGCTTTCCAGGGCTTGCAATCGGCACTGACAGTTCAATGTACACGTCTGCTCCCACCCCCTTCTACTCCATAAAAAGTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR TCA 90 bp | GATCTCCAGCTTGCTCAAATGAGTGGAAACTGGAACAAGTGTTGGTaGGATCAGCCTACAGGAGAAATCGGGGTGGTGGGGCCTCTGACT | + |
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Preference number: 1 (lower is better) Translates to: DLQLAQMSGNWNKCW*DQPTGEIGVVGPLT Trigger: AGTCAGAGGCCCCACCACCCCGATTTCTCCTGTAGGCTGATCTCACCAACACTTGTTCCAGTTTCCACTCATTTGAGCAAGCTGGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR TCA 90 bp | AATGATACGGCCCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTaGTCACCACTCCTGCAGCCACTTCGGAAGCATGAAGTGAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: NDTAPLCFQNVFRTQ*SPLLQPLRKHEVKA Trigger: GGCTTTCACTTCATGCTTCCGAAGTGGCTGCAGGAGTGGTGATCACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGGGCCGTATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR GCA 90 bp | CTACTCGCATCAAAATCTTACTGTGCTGCCTCCCCTGACTCTTCCTaGACCTTGTCGCCAATCTTGAGTGTTAAACTACATCCTGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LLASKSYCAASPDSS*TLSPILSVKLHPAS Trigger: GGAGGCAGGATGTAGTTTAACACTCAAGATTGGCGACAAGGTGCAGGAAGAGTCAGGGGAGGCAGCACAGTAAGATTTTGATGCGAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR CCA 90 bp | GAAAGCCAACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTaGGTCGAGGGGATATCAGGTTATTCTAAGGTTGATAGAAAATCA | + |
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Preference number: 1 (lower is better) Translates to: ESQPWVAKLAVVAAG*VEGISGYSKVDRKS Trigger: TGATTTTCTATCAACCTTAGAATAACCTGATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTTGGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR CCA 90 bp | GGGACAGTCGCTAAAGAAGATGTTCTTGGAACTGTGAGTGAAGACTaGAGGGAACTACTTCCTTGCTTCCCACCTCCAGCATATCCCATG | + |
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Preference number: 1 (lower is better) Translates to: GTVAKEDVLGTVSED*RELLPCFPPPAYPM Trigger: CATGGGATATGCTGGAGGTGGGAAGCAAGGAAGTAGTTCCCTCCAGTCTTCACTCACAGTTCCAAGAACATCTTCTTTAGCGACTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR TCA 90 bp | ACAGGGACGATCGACTTAATTTCGGAGAGTGGGAGCAGGGAAAGATaGCTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: TGTIDLISESGSRER*LTEQLRVRILFLWR Trigger: TCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTCATCTTTCCCTGCTCCCACTCTCCGAAATTAAGTCGATCGTCCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR TCA 90 bp | AGTCAGAATCCTCTTCTTATGGAGAAAGAGCTAAGGGGTGGAGAATaGTACGGCCCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: SQNPLLMEKELRGGE*YGPTLLSECVQDAV Trigger: CACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGGGCCGTATCATTCTCCACCCCTTAGCTCTTTCTCCATAAGAAGAGGATTCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR TCA 90 bp | TATTCTAGAATGAAAAATTTATTAGGAAAGAACGCATGGCTGGGCTaGCTAGAGCTGGGGCTGGTCATGTGGAACCGAGAACCCAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: YSRMKNLLGKNAWLG*LELGLVMWNREPRY Trigger: GTACCTGGGTTCTCGGTTCCACATGACCAGCCCCAGCTCTAGTCAGCCCAGCCATGCGTTCTTTCCTAATAAATTTTTCATTCTAGAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR GCA 90 bp | CTCCAGCATATCCCATGTATCTTAAGGACACCGTGCCTCCTTCCTTaGCTGCCTAGGGAATGGTTTGCAAAATGTAAAATGCACTCGTTA | + |
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Preference number: 1 (lower is better) Translates to: LQHIPCILRTPCLLP*LPREWFAKCKMHSL Trigger: TAACGAGTGCATTTTACATTTTGCAAACCATTCCCTAGGCAGGCAAGGAAGGAGGCACGGTGTCCTTAAGATACATGGGATATGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR CCA 90 bp | CAGGACAATGCTTTGATGAATGTTCATGCTGAATTTCTTTTCCATTaGCTGAGGAGGTCCAGTGGTCCTAACACGCCCAGGCATGACTTT | + |
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Preference number: 1 (lower is better) Translates to: QDNALMNVHAEFLFH*LRRSSGPNTPRHDF Trigger: AAAGTCATGCCTGGGCGTGTTAGGACCACTGGACCTCCTCAGCCAATGGAAAAGAAATTCAGCATGAACATTCATCAAAGCATTGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR CCA 90 bp | AATAGTCCTTCCTCATGGCAGGGATCTCCAGCTTGCTCAAATGAGTaGAAACTGGAACAAGTGTTGGTGAGATCAGCCTACAGGAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: NSPSSWQGSPACSNE*KLEQVLVRSAYRRN Trigger: ATTTCTCCTGTAGGCTGATCTCACCAACACTTGTTCCAGTTTCCACTCATTTGAGCAAGCTGGAGATCCCTGCCATGAGGAAGGACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR CCA 90 bp | AGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGAGCTAAGGGGTaGAGAATGATACGGCCCCACTTTGCTTTCAGAATGTGTTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SSESESSSYGERAKG*RMIRPHFAFRMCSG Trigger: TCCTGAACACATTCTGAAAGCAAAGTGGGGCCGTATCATTCTCCACCCCTTAGCTCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR TCA 90 bp | TCTCTTGAAATTCCCTGCTTCCCACTAGTTATAACCTTCTCCCATTaGTTGTTCTTATCTACTCTCATTGCCCTGTACTGGAGTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SLEIPCFPLVITFSH*LFLSTLIALYWSSG Trigger: CCCTGAACTCCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGGGAGAAGGTTATAACTAGTGGGAAGCAGGGAATTTCAAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR CCA 90 bp | TCATATGTTCTCGTGGCCACACTGTGGGTAGACAGTCTAAGCCACTaGATGGCTGATTCTTCTATTTTACAAAAAGTCACTTCTGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: SYVLVATLWVDSLSH*MADSSILQKVTSVF Trigger: AAACACAGAAGTGACTTTTTGTAAAATAGAAGAATCAGCCATCCAGTGGCTTAGACTGTCTACCCACAGTGTGGCCACGAGAACATATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR CAA 90 bp | GGGACTTGGTCACACCAAGCAACCAGCTCAGAGACTCAGATGTCTTaGCCTCCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: GTWSHQATSSETQMS*PPLVPKRPGCVAWP Trigger: CGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGGAGGCAAAGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTGACCAAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR-3UTR CCA 90 bp | AACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATCTCATTGCCCTGTACTaGAGTTCAGGGCACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: NLGWQSWQWWQLGGSRGYLIALY*SSGHPG Trigger: TCCTGGGTGCCCTGAACTCCAGTACAGGGCAATGAG...ATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR TCA 90 bp | AAGCGACGTGGCAGGATCTGTTTCAAGTCACAGGAAGTCCGACACACCACAGCTGTGGAAGCCATGCTGTaGGTCTGTGTGCGGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KRRGRICFKSQEVRHTTAVEAML*VCVRLP Trigger: TGGGAGCCGCACACAGACTCACAGCATGGCTTCCAC...AGCTGTGGTGTGTCGGACTTCCTGTGACTTGAAACAGATCCTGCCACGTCGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCAGCATATCCCATGTATCTTAAGGACACCGTGCCTCCTTCCTTGCCTGGTGGTGGCAGCTGGGTaGGTCGAGGGGATATCAGGT | + |
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Preference number: 2 (lower is better) Translates to: HLQHIPCILRTPCLLPCLVVAAG*VEGISG Trigger: ACCTGATATCCCCTCGACCCACCCAGCTGCCACCAC...CAGGCAAGGAAGGAGGCACGGTGTCCTTAAGATACATGGGATATGCTGGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCAGCATATCCCATGTATCTTAAGGACACCGTGCCTCCTTCCTTGCCTGTGGCAAAGTTGGCAGTaGTGGCAGCTGGGTGGGTCG | + |
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Preference number: 2 (lower is better) Translates to: HLQHIPCILRTPCLLPCLWQSWQ*WQLGGS Trigger: CGACCCACCCAGCTGCCACCACTGCCAACTTTGCCA...CAGGCAAGGAAGGAGGCACGGTGTCCTTAAGATACATGGGATATGCTGGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATCAAGGGACATCATCTCTTaGAATTCCCTGCTTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: PWVAKLAVVAAGWVEGISRDIIS*NSLLPT Trigger: AGTGGGAAGCAGGGAATTTCAAGAGATGATGTCCCT...TGATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATCAGGGTCAGAGCATGGGTaGGGTTTTGCCCAATATTAT | + |
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Preference number: 2 (lower is better) Translates to: PWVAKLAVVAAGWVEGISGSEHG*GFAQYY Trigger: ATAATATTGGGCAAAACCCCACCCATGCTCTGACCC...TGATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR CCA 90 bp | AAGCGACGTGGCAGGATCTGTTTCAAGTCACAGGAAGTCCGACACACCACAGCTCGGAGCTCCTGTGACTaGCTCTCTGCCAACAGGACA | + |
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Preference number: 2 (lower is better) Translates to: KRRGRICFKSQEVRHTTARSSCD*LSANRT Trigger: TGTCCTGTTGGCAGAGAGCCAGTCACAGGAGCTCCG...AGCTGTGGTGTGTCGGACTTCCTGTGACTTGAAACAGATCCTGCCACGTCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR CAA 90 bp | GATGACTTTTTATGGAGTAGAAGGGGGTGGGAGCAGACGTGTACATaGAACTGTCAGTGCCGATTGCAAGCCCTGGAAAGCCTCGGGATC | + |
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Preference number: 2 (lower is better) Translates to: DDFLWSRRGWEQTCT*NCQCRLQALESLGI Trigger: GATCCCGAGGCTTTCCAGGGCTTGCAATCGGCACTGACAGTTCAATGTACACGTCTGCTCCCACCCCCTTCTACTCCATAAAAAGTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGTGAGATCAGCCTACAGGAGAAATCGGGGTGGTGGGGCCTCTGACTTCGAATTTCTTTTCCATTaGCTGAGGAGGTCCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: VLVRSAYRRNRGGGASDFEFLFH*LRRSSG Trigger: ACCACTGGACCTCCTCAGCCAATGGAAAAGAAATTC...GAAGTCAGAGGCCCCACCACCCCGATTTCTCCTGTAGGCTGATCTCACCAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTACAGGAGAAATCGGGGTGGTGGGGCCTCTGACTTCCTCAACAGTGTTGCAAAACATCACAGTGTaGAAGCCATGCTGTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: QPTGEIGVVGPLTSSTVLQNITV*KPCCES Trigger: AGACTCACAGCATGGCTTCCACACTGTGATGTTTTG...CAACACTGTTGAGGAAGTCAGAGGCCCCACCACCCCGATTTCTCCTGTAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCGTCACTGTAGACCTCTaGGTTGCAGCTGGGGCTACC | + |
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Preference number: 2 (lower is better) Translates to: LLPILRLSSGPSSHPVIIVTVDL*VAAGAT Trigger: GGTAGCCCCAGCTGCAACCCAGAGGTCTACAGTGAC...GATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR-3UTR CCA 90 bp | AACCCTTGTTCTAATCTGAGAGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGAGAAAGAGCTAAGGGGTaGAGAATGATACGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: NPCSNLRDLECFRGEQSGERAKG*RMIRPH Trigger: GTGGGGCCGTATCATTCTCCACCCCTTAGCTCTTTC...TCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCTCTCAGATTAGAACAAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGACTAGGTACTGAGTTTTTCTCTCAAGTTGCCACGCCTGCTCAGACTTGGCATGGCCTCCAGGATTaGACTCAGCCTGAAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LGLGTEFFSQVATPAQTWHGLQD*TQPEEV Trigger: CACTTCTTCAGGCTGAGTTCAATCCTGGAGGCCATG...CCAAGTCTGAGCAGGCGTGGCAACTTGAGAGAAAAACTCAGTACCTAGTCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR TCA 90 bp | GTGCAGTCAACAAACATGTTGACTTTGGGTCCTGGAATTCTGGAGAAAGCCAATGGGTGGTGGGGCCTCTaGCTTCCTCAACAGTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VQSTNMLTLGPGILEKANGWWGL*LPQQCW Trigger: CCAACACTGTTGAGGAAGTCAGAGGCCCCACCACCC...ATTGGCTTTCTCCAGAATTCCAGGACCCAAAGTCAACATGTTTGTTGACTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR TCA 90 bp | ACCGTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGAGCCCCAGCTGCTCATaGGTTCAGGAGCCTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: TVQKTAKETNPHYEEDCQSPSCS*VQEPSV Trigger: GACAGAAGGCTCCTGAACTCATGAGCAGCTGGGGCT...CTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAACGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGAGTAGAGACCAGGCTGTGTaGCCTGGCCGGTACTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: VQKTAKETNPHYEEDCQSRDQAV*PGRYSC Trigger: GCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCT...ACTCTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR CAA 90 bp | CCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTaGCAAATACACAAGAGAAGAAAACTGACCCAGAAAGTGAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: PLVPKRPGCVAWPVL*QIHKRRKLTQKVKY Trigger: GTACTTCACTTTCTGGGTCAGTTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGTGAGATCAGCCTACAGGAGAAATCGGGGTGGTGGGGCCTCTGACTTCGATGAATGTTCATGCTaGATTTCTTTTCCATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VLVRSAYRRNRGGGASDFDECSC*ISFPLA Trigger: AGCCAATGGAAAAGAAATTCAGCATGAACATTCATC...GAAGTCAGAGGCCCCACCACCCCGATTTCTCCTGTAGGCTGATCTCACCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAATCTTACTGTGCTGCCTCCCCTGACTCTTCCTGCACCTTGTCGCCAATCTAATAGAATGTTGACATaGGGACCCTTGTCACACACG | + |
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Preference number: 2 (lower is better) Translates to: QNLTVLPPLTLPAPCRQSNRMLT*GPLSHT Trigger: CGTGTGTGACAAGGGTCCTCATGTCAACATTCTATT...AGATTGGCGACAAGGTGCAGGAAGAGTCAGGGGAGGCAGCACAGTAAGATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCGACGTGGCAGGATCTGTTTCAAGTCACAGGAAGTCCGACACACCACAGCTATTAATTGCACATATTaGCTATCAGAGGGGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: KRRGRICFKSQEVRHTTAINCTY*LSEGLL Trigger: AAGTAGCCCCTCTGATAGTCAATATGTGCAATTAAT...AGCTGTGGTGTGTCGGACTTCCTGTGACTTGAAACAGATCCTGCCACGTCGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCAGACTCAGATGTCTTTaGCTCCTCTGGTACCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLPILRLSSGPSSHPVIIRLRCL*LLWYLR Trigger: TCTTAGGTACCAGAGGAGGCAAAGACATCTGAGTCT...GATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCTTGCCTGCCTAGGGAATGGTTTGCAAAATGTAAAATGCACTCGTTATAAAGCCAACCTTGGGTaGCAAAGTTGGCAGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SFLACLGNGLQNVKCTRYKANLG*QSWQWW Trigger: CCACCACTGCCAACTTTGCCACCCAAGGTTGGCTTT...ATAACGAGTGCATTTTACATTTTGCAAACCATTCCCTAGGCAGGCAAGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR GCA 90 bp | ACCGTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGCCTGGCCGGTACTCTTaGAAATACACAAGAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: TVQKTAKETNPHYEEDCQPGRYS*KYTREE Trigger: TTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGG...CTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAACGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTCTCTTGGGACTAGGTACTGAGTTTTTCTCTCAAGTTGCCACGCCTGCTTCTCTTGAAATTCCCTaGTTCCCACTAGTTATAACC | + |
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Preference number: 2 (lower is better) Translates to: LVLLGLGTEFFSQVATPASLEIP*FPLVIT Trigger: GGTTATAACTAGTGGGAAGCAGGGAATTTCAAGAGA...AGCAGGCGTGGCAACTTGAGAGAAAAACTCAGTACCTAGTCCCAAGAGAACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR CAA 90 bp | AGTCATTATCTCTTTTTCTCTGAGTCGGGCTCTCATCTTTTCTTCTaGTTCCTCCTCGGCGGTTCCAAGATTAGCAAGAGATTGTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: SHYLFFSESGSHLFF*FLLGGSKISKRLFH Trigger: ATGGAACAATCTCTTGCTAATCTTGGAACCGCCGAGGAGGAACAAGAAGAAAAGATGAGAGCCCGACTCAGAGAAAAAGAGATAATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTCTCTTGGGACTAGGTACTGAGTTTTTCTCTCAAGTTGCCACGCCTGCTATAACCTTCTCCCATTaGTTGTTCTTATCTACTCTC | + |
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Preference number: 2 (lower is better) Translates to: LVLLGLGTEFFSQVATPAITFSH*LFLSTL Trigger: GAGAGTAGATAAGAACAATCAATGGGAGAAGGTTAT...AGCAGGCGTGGCAACTTGAGAGAAAAACTCAGTACCTAGTCCCAAGAGAACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTGTGCAGTCAACAAACATGTTGACTTTGGGTCCTGGAATTCTGGAGAAATCACCATGTAATATGTaGGTTAATTACTGTGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: ISVQSTNMLTLGPGILEKSPCNM*VNYCVH Trigger: GTGGACACAGTAATTAACTCACATATTACATGGTGA...TTTCTCCAGAATTCCAGGACCCAAAGTCAACATGTTTGTTGACTGCACAGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR TCA 72 bp | GTGAGTCTGTGTGCGGCTCCCAAGGCGGAGCTCCTGTaGCTGGCTCTCTGCCAACAGGACAATGCTTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: VSLCAAPKAELL*LALCQQDNALM Trigger: CATCAAAGCATTGTCCTGTTGGCAGAGAGCCAGTCACAGGAGCTCCGCCTTGGGAGCCGCACACAGACTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR GCA 72 bp | TCTGGGAACCACCAGCTCTGCACACCACACCGACACTaGTCCTCTCTGATGGCACCGTCGCATTGGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGNHQLCTPHRH*SSLMAPSHWFS Trigger: AGAGAACCAATGCGACGGTGCCATCAGAGAGGAGCAGTGTCGGTGTGGTGTGCAGAGCTGGTGGTTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR GCA 72 bp | AACATCACAGTGTGGAAGCCATGCTGTGAGTCTGTGTaGGGCTCCCAAGGCGGAGCTCCTGTGACTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NITVWKPCCESV*GSQGGAPVTGS Trigger: AGAGCCAGTCACAGGAGCTCCGCCTTGGGAGCCGCACACAGACTCACAGCATGGCTTCCACACTGTGATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR-3UTR CAA 90 bp | CATAGGATGGGGGAGCCAGGGGAAGTGAACTCCAGAGGACTTAGAGGCTGGGACCACGCCTGCTCAGACTaGGTAGGGAAGTGTGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HRMGEPGEVNSRGLRGWDHACSD*VGKCET Trigger: TGTTTCACACTTCCCTACCAAGTCTGAGCAGGCGTG...GTCCCAGCCTCTAAGTCCTCTGGAGTTCACTTCCCCTGGCTCCCCCATCCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR GCA 72 bp | GCTTGTGTTAACTTTGGCAAGGAGGTCAGGGAATGGTaGTTCTGGGAACCACCAGCTCTGCACACCACACCG | + |
|
Preference number: 3 (lower is better) Translates to: ACVNFGKEVREW*FWEPPALHTTP Trigger: CGGTGTGGTGTGCAGAGCTGGTGGTTCCCAGAAGCACCATTCCCTGACCTCCTTGCCAAAGTTAACACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR CCA 72 bp | GTTAACTTTGGCAAGGAGGTCAGGGAATGGTGCTTCTaGGAACCACCAGCTCTGCACACCACACCGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: VNFGKEVREWCF*EPPALHTTPTL Trigger: CAGTGTCGGTGTGGTGTGCAGAGCTGGTGGTTCCCAGAAGCACCATTCCCTGACCTCCTTGCCAAAGTTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCAGGGAATGGTGCTTCTGGGAACCACCAGCTCTGCACACCACACCGACACAAGGGACATCATCTCTaGAAATTCCCTGCTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RSGNGASGNHQLCTPHRHKGHHL*KFPASH Trigger: GTGGGAAGCAGGGAATTTCAAGAGATGATGTCCCTT...GTGTCGGTGTGGTGTGCAGAGCTGGTGGTTCCCAGAAGCACCATTCCCTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR-3UTR CAA 90 bp | CGGCCCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTGATCACCACTCCTGCAAAGGCACTTCCCACTaGAGGGACCAAGCATACCTC | + |
|
Preference number: 3 (lower is better) Translates to: RPHFAFRMCSGRSDHHSCKGTSH*RDQAYL Trigger: GAGGTATGCTTGGTCCCTCAAGTGGGAAGTGCCTTT...GCAGGAGTGGTGATCACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| 3UTR TCA 72 bp | TATGGAGTAGAAGGGGGTGGGAGCAGACGTGTACATTaGACTGTCAGTGCCGATTGCAAGCCCTGGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YGVEGGGSRRVH*TVSADCKPWKA Trigger: GGCTTTCCAGGGCTTGCAATCGGCACTGACAGTTCAATGTACACGTCTGCTCCCACCCCCTTCTACTCCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR TCA 72 bp | GCAGTGATCACCACTCCTGCAGCCACTTCGGAAGCATaGAGTGAAAGCCGAGACAGCCTTGAAAGGCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: AVITTPAATSEA*SESRDSLERHF Trigger: GAAGTGCCTTTCAAGGCTGTCTCGGCTTTCACTTCATGCTTCCGAAGTGGCTGCAGGAGTGGTGATCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| 3UTR GCA 72 bp | CACACCAAGCAACCAGCTCAGAGACTCAGATGTCTTTaGCTCCTCTGGTACCTAAGAGACCAGGCTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HTKQPAQRLRCL*LLWYLRDQAVW Trigger: CCACACAGCCTGGTCTCTTAGGTACCAGAGGAGGCAAAGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR CCA 72 bp | CCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTaGGTCGAGGGGATATCAGGTTATTCTAAGGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PWVAKLAVVAAG*VEGISGYSKVD Trigger: ATCAACCTTAGAATAACCTGATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR CCA 72 bp | TTAGCACGGGGTCACTGTAGACCTCTGGGTTGCAGCTaGGGCTACCGTTCAGAAAACTGCCAAGGAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LARGHCRPLGCS*GYRSENCQGDK Trigger: TTTGTCTCCTTGGCAGTTTTCTGAACGGTAGCCCCAGCTGCAACCCAGAGGTCTACAGTGACCCCGTGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR TCA 72 bp | AAGTTGCCACGCCTGCTCAGACTTGGTAGGGAAGTGTaGAACATGGCCTCCAGGATTGAACTCAGCCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLPRLLRLGREV*NMASRIELSLK Trigger: CTTCAGGCTGAGTTCAATCCTGGAGGCCATGTTTCACACTTCCCTACCAAGTCTGAGCAGGCGTGGCAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR TCA 72 bp | TGGCACCGTCGCATTGGTTCTCTTGGGACTAGGTACTaGGTTTTTCTCTCAAGTTGCCACGCCTGCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: WHRRIGSLGTRY*VFLSSCHACSD Trigger: GTCTGAGCAGGCGTGGCAACTTGAGAGAAAAACTCAGTACCTAGTCCCAAGAGAACCAATGCGACGGTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR TCA 72 bp | CCTCCCCTGACTCTTCCTGCACCTTGTCGCCAATCTTaGGTGTTAAACTACATCCTGCCTCCCCATCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPLTLPAPCRQS*VLNYILPPHLC Trigger: ACAGAGATGGGGAGGCAGGATGTAGTTTAACACTCAAGATTGGCGACAAGGTGCAGGAAGAGTCAGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR CCA 72 bp | CTTTGCCTCCTCTGGTACCTAAGAGACCAGGCTGTGTaGCCTGGCCGGTACTCTTGCAAATACACAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCLLWYLRDQAV*PGRYSCKYTRE Trigger: TTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGGAGGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTGTCGCCAATCTTGAGTGTTAAACTACATCCTGCCTCCCCATCTCTGTGCACTTCCTCAACAGTGTaGGCTCCGGTGGAAAAACGG | + |
|
Preference number: 3 (lower is better) Translates to: TLSPILSVKLHPASPSLCTSSTV*APVEKR Trigger: CCGTTTTTCCACCGGAGCCAACACTGTTGAGGAAGT...GCACAGAGATGGGGAGGCAGGATGTAGTTTAACACTCAAGATTGGCGACAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR TCA 72 bp | CCTACTCGCATCAAAATCTTACTGTGCTGCCTCCCCTaGCTCTTCCTGCACCTTGTCGCCAATCTTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PTRIKILLCCLP*LFLHLVANLEC Trigger: ACACTCAAGATTGGCGACAAGGTGCAGGAAGAGTCAGGGGAGGCAGCACAGTAAGATTTTGATGCGAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR TCA 72 bp | GGCTGGTCATGTGGAACCGAGAACCCAGGTACCCTCTaGTTAATTCTCATATGTTCTCGTGGCCACACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GWSCGTENPGTL*LILICSRGHTV Trigger: CACAGTGTGGCCACGAGAACATATGAGAATTAATCAGAGGGTACCTGGGTTCTCGGTTCCACATGACCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| 3UTR CCA 72 bp | CCTCCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTaGCCGGTACTCTTGCAAATACACAAGAGAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPLVPKRPGCVA*PVLLQIHKRRK Trigger: TTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGACGTGGCAGGATCTGTTTCAAGTCACAGGAAGTCCGACACACCACAGCTCTATGGAGCCTGAACTaGATTCTGGAAGTGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KRRGRICFKSQEVRHTTALWSLN*ILEVFL Trigger: GAGAAACACTTCCAGAATCAAGTTCAGGCTCCATAG...AGCTGTGGTGTGTCGGACTTCCTGTGACTTGAAACAGATCCTGCCACGTCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR TCA 72 bp | TCCTTCCTCATGGCAGGGATCTCCAGCTTGCTCAAATaGGTGGAAACTGGAACAAGTGTTGGTGAGATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SFLMAGISSLLK*VETGTSVGEIS Trigger: GCTGATCTCACCAACACTTGTTCCAGTTTCCACTCATTTGAGCAAGCTGGAGATCCCTGCCATGAGGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR CCA 72 bp | TCCTCATGGCAGGGATCTCCAGCTTGCTCAAATGAGTaGAAACTGGAACAAGTGTTGGTGAGATCAGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SSWQGSPACSNE*KLEQVLVRSAY Trigger: GTAGGCTGATCTCACCAACACTTGTTCCAGTTTCCACTCATTTGAGCAAGCTGGAGATCCCTGCCATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR-3UTR CAA 90 bp | CCATTGATTGTTCTTATCTACTCTCATTGCCCTGTACTGGAGTTCAGGGCACCCAGCATGGGTGGGGTTTaGCCCAATATTATGGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLIVLIYSHCPVLEFRAPSMGGV*PNIMGF Trigger: GAACCCCATAATATTGGGCAAAACCCCACCCATGCT...GGGTGCCCTGAACTCCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR CCA 72 bp | GCTAAAGAAGATGTTCTTGGAACTGTGAGTGAAGACTaGAGGGAACTACTTCCTTGCTTCCCACCTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AKEDVLGTVSED*RELLPCFPPPA Trigger: TGCTGGAGGTGGGAAGCAAGGAAGTAGTTCCCTCCAGTCTTCACTCACAGTTCCAAGAACATCTTCTTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR CCA 72 bp | CTCCTCTTTGATGACTTTTTATGGAGTAGAAGGGGGTaGGAGCAGACGTGTACATTGAACTGTCAGTGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LLFDDFLWSRRG*EQTCTLNCQCR Trigger: TCGGCACTGACAGTTCAATGTACACGTCTGCTCCCACCCCCTTCTACTCCATAAAAAGTCATCAAAGAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR CCA 72 bp | GCTTTGATGAATGTTCATGCTGAATTTCTTTTCCATTaGCTGAGGAGGTCCAGTGGTCCTAACACGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALMNVHAEFLFH*LRRSSGPNTPR Trigger: CCTGGGCGTGTTAGGACCACTGGACCTCCTCAGCCAATGGAAAAGAAATTCAGCATGAACATTCATCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGAGTGCCTGGCCGGTACTCTaGCAAATACACAAGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VQKTAKETNPHYEEDCQSAWPVL*QIHKRR Trigger: TCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGC...ACTCTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR GCA 72 bp | AACCTTCTCCCATTGATTGTTCTTATCTACTCTCATTaGCCTGTACTGGAGTTCAGGGCACCCAGGATGATG | + |
|
Preference number: 3 (lower is better) Translates to: NLLPLIVLIYSH*PVLEFRAPRMM Trigger: CATCATCCTGGGTGCCCTGAACTCCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGGGAGAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR CCA 72 bp | TCTGAGAGACCTGGAATGCTTCCGGGGAGAGCAGAGTaGATAAGAGCGGAAAAGATGGAATATTCTAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: SERPGMLPGRAE*IRAEKMEYSRM Trigger: CATTCTAGAATATTCCATCTTTTCCGCTCTTATCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| 3UTR TCA 72 bp | CTGCCAACAGGACAATGCTTTGATGAATGTTCATGCTaGATTTCTTTTCCATTGGCTGAGGAGGTCCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPTGQCFDECSC*ISFPLAEEVQW Trigger: CCACTGGACCTCCTCAGCCAATGGAAAAGAAATTCAGCATGAACATTCATCAAAGCATTGTCCTGTTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR TCA 72 bp | TTATGTGTTGATTCTGCTTCCAGTCCAATAGAATGTTaGCATGAGGACCCTTGTCACACACGTGGCCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: LCVDSASSPIEC*HEDPCHTRGPM Trigger: CATAGGGCCACGTGTGTGACAAGGGTCCTCATGTCAACATTCTATTGGACTGGAAGCAGAATCAACACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR CCA 72 bp | TCAGAATCCTCTTCTTATGGAGAAAGAGCTAAGGGGTaGAGAATGATACGGCCCCACTTTGCTTTCAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: SESSSYGERAKG*RMIRPHFAFRM Trigger: CATTCTGAAAGCAAAGTGGGGCCGTATCATTCTCCACCCCTTAGCTCTTTCTCCATAAGAAGAGGATTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| 3UTR CCA 72 bp | CTCGTGGCCACACTGTGGGTAGACAGTCTAAGCCACTaGATGGCTGATTCTTCTATTTTACAAAAAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LVATLWVDSLSH*MADSSILQKVT Trigger: AGTGACTTTTTGTAAAATAGAAGAATCAGCCATCCAGTGGCTTAGACTGTCTACCCACAGTGTGGCCACGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| 3UTR TCA 72 bp | ATTCCCTGCTTCCCACTAGTTATAACCTTCTCCCATTaGTTGTTCTTATCTACTCTCATTGCCCTGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: IPCFPLVITFSH*LFLSTLIALYW Trigger: CCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGGGAGAAGGTTATAACTAGTGGGAAGCAGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR GCA 72 bp | TATCAGGTTATTCTAAGGTTGATAGAAAATCACGTGTaGTTTTACAATGAGCAAGGGAACCTACATGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: YQVILRLIENHV*FYNEQGNLHAN Trigger: GTTAGCATGTAGGTTCCCTTGCTCATTGTAAAAGCACACGTGATTTTCTATCAACCTTAGAATAACCTGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGGCTACTTTACGAATTACCTACAGTGTGAATATCAAATTTGTTAAGAGATCTTCCTTCTCCTCTTaGATGACTTTTTATGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RGATLRITYSVNIKFVKRSSFSS*MTFYGV Trigger: TACTCCATAAAAAGTCATCAAAGAGGAGAAGGAAGA...TCTCTTAACAAATTTGATATTCACACTGTAGGTAATTCGTAAAGTAGCCCCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR TCA 72 bp | CTATGTACTAACTTTAGTTTTTCACCATGTAATATGTaGGTTAATTACTGTGTCCACAAAGGCAGTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LCTNFSFSPCNM*VNYCVHKGSPN Trigger: ATTGGGACTGCCTTTGTGGACACAGTAATTAACTCACATATTACATGGTGAAAAACTAAAGTTAGTACATAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| CDS-3UTR TCA 90 bp | CATAGGATGGGGGAGCCAGGGGAAGTGAACTCCAGAGGACTTAGAGGCTGGGACGCACTGCGTTGGATGTaGCCCCGCGCGGGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRMGEPGEVNSRGLRGWDALRWM*PRAGRG Trigger: GCCTCTCCCCGCGCGGGGTCACATCCAACGCAGTGC...GTCCCAGCCTCTAAGTCCTCTGGAGTTCACTTCCCCTGGCTCCCCCATCCTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR TCA 90 bp | CGGCCCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTGATCACCACTCCTGCGCACTGCGTTGGATGTaGCCCCGCGCGGGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPHFAFRMCSGRSDHHSCALRWM*PRAGRG Trigger: GCCTCTCCCCGCGCGGGGTCACATCCAACGCAGTGC...GCAGGAGTGGTGATCACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATCGGCCTCGCTGGCTCTaGTCAGGTTCCTACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGWQSWQWWQLGGSRGYRPRWL*SGSYRP Trigger: TGGCCTGTAGGAACCTGAGCAGAGCCAGCGAGGCCG...ATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGTCAGGGAATGGTGCTTCTGGGAACCACCAGCTCTGCACACCACACCGTTCCCAGGGTGCACTaGGTTGGATGTGACCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QGGQGMVLLGTTSSAHHTVPRVH*VGCDPA Trigger: CGCGGGGTCACATCCAACGCAGTGCACCCTGGGAAC...GGTGTGGTGTGCAGAGCTGGTGGTTCCCAGAAGCACCATTCCCTGACCTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR TCA 90 bp | AACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATACGGCCTGGCCAAGGTaGACAGCAGCTTGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: NLGWQSWQWWQLGGSRGYTAWPR*TAACTP Trigger: GGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCCGT...ATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGTCAGGGAATGGTGCTTCTGGGAACCACCAGCTCTGCACACCACACCGCTTCGGCAAAATGCTaGACGCTACGGAGCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGGQGMVLLGTTSSAHHTASAKC*TLRSTA Trigger: GGCCGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGC...GGTGTGGTGTGCAGAGCTGGTGGTTCCCAGAAGCACCATTCCCTGACCTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATCAGGGGAGAGGCGACGGTaGAGTTCATTGGAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWVAKLAVVAAGWVEGISGERRR*SSLEKR Trigger: CCTCTTCTCCAATGAACTGCACCGTCGCCTCTCCCC...TGATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CCA 90 bp | AACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATACACCCAGCCGTCCTTaGTGGTTCTCTCCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLGWQSWQWWQLGGSRGYTPSRP*WFSPPS Trigger: GCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGT...ATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CCA 90 bp | AAGCGACGTGGCAGGATCTGTTTCAAGTCACAGGAAGTCCGACACACCACAGCTCCCAGCCGTCCTTGGTaGTTCTCTCCTCCCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KRRGRICFKSQEVRHTTAPSRPW*FSPPSP Trigger: CGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGG...AGCTGTGGTGTGTCGGACTTCCTGTGACTTGAAACAGATCCTGCCACGTCGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| CDS-3UTR TCA 90 bp | GAACGCATGGCTGGGCTGACTAGAGCTGGGGCTGGTCATGTGGAACCGAGAACCGTTGCGATGGATGGCTaGGTACATCATGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERMAGLTRAGAGHVEPRTVAMDG*VHHVPR Trigger: CCTGGGAACATGATGTACTCAGCCATCCATCGCAAC...GGTTCTCGGTTCCACATGACCAGCCCCAGCTCTAGTCAGCCCAGCCATGCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGACTAGAGCTGGGGCTGGTCATGTGGAACCGAGAACCCAGGTACCCTCTCAGGTCCAGGGTCATTaGTTCCACCTTGGCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTRAGAGHVEPRTQVPSQVQGH*FHLGFV Trigger: CACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTG...AGAGGGTACCTGGGTTCTCGGTTCCACATGACCAGCCCCAGCTCTAGTCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGATAAGAGCGGAAAAGATGGAACCCAGCCGTCCTTGGTaGTTCTCTCCTCCCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPGMLPGRAEWIRAEKMEPSRPW*FSPPSP Trigger: CGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGG...TTCCATCTTTTCCGCTCTTATCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | GAACGCATGGCTGGGCTGACTAGAGCTGGGGCTGGTCATGTGGAACCGAGAACCGGAGGGCAAAGGACTTaGCAGTCTCGAACCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: ERMAGLTRAGAGHVEPRTGGQRT*QSRTLF Trigger: GAATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCC...GGTTCTCGGTTCCACATGACCAGCCCCAGCTCTAGTCAGCCCAGCCATGCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | CATAGGATGGGGGAGCCAGGGGAAGTGAACTCCAGAGGACTTAGAGGCTGGGACCTACCCAGTCGGTCCTaGATGAGCCTCTCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRMGEPGEVNSRGLRGWDLPSRS*MSLSLS Trigger: ACTCAGTGAGAGGCTCATCCAGGACCGACTGGGTAG...GTCCCAGCCTCTAAGTCCTCTGGAGTTCACTTCCCCTGGCTCCCCCATCCTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCTGCACTGCGTTGGATGTaGCCCCGCGCGGGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFQFFVFLQAPVATQSLSALRWM*PRAGRG Trigger: GCCTCTCCCCGCGCGGGGTCACATCCAACGCAGTGC...AGATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTTGCAAATATCTCCATGGCGGTGGTaGTCCCGTCGTATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLVPKRPGCVAWPVLLQISPWRW*SRRISV Trigger: GACAGAGATACGACGGGAGCACCACCGCCATGGAGA...TATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGATAAGAGCGGAAAAGATGGAACGGCCTCGCTGGCTCTaGTCAGGTTCCTACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGMLPGRAEWIRAEKMERPRWL*SGSYRP Trigger: TGGCCTGTAGGAACCTGAGCAGAGCCAGCGAGGCCG...TTCCATCTTTTCCGCTCTTATCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR GCA 90 bp | CATAGGATGGGGGAGCCAGGGGAAGTGAACTCCAGAGGACTTAGAGGCTGGGACAATGCTTCGGCAAAATaGTGCACGCTACGGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: HRMGEPGEVNSRGLRGWDNASAK*CTLRST Trigger: CGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGCATT...GTCCCAGCCTCTAAGTCCTCTGGAGTTCACTTCCCCTGGCTCCCCCATCCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGGAGGGACTTGGTCACACCAAGCAACCAGCTCAGAGACTCAGATGTCTGGGGAGAGGCGACGGTaGAGTTCATTGGAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKGGTWSHQATSSETQMSGERRR*SSLEKR Trigger: CCTCTTCTCCAATGAACTGCACCGTCGCCTCTCCCC...AGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTGACCAAGTCCCTCCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CCA 90 bp | CATAGGATGGGGGAGCCAGGGGAAGTGAACTCCAGAGGACTTAGAGGCTGGGACGGAGGGCAAAGGACTTaGCAGTCTCGAACCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: HRMGEPGEVNSRGLRGWDGGQRT*QSRTLF Trigger: GAATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCC...GTCCCAGCCTCTAAGTCCTCTGGAGTTCACTTCCCCTGGCTCCCCCATCCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CCA 90 bp | CATAGGATGGGGGAGCCAGGGGAAGTGAACTCCAGAGGACTTAGAGGCTGGGACTGTTATAAGCCAGCATaGCCCAGTAGTCGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HRMGEPGEVNSRGLRGWDCYKPA*PSSRSS Trigger: CGAGGAGCGACTACTGGGCCATGCTGGCTTATAACA...GTCCCAGCCTCTAAGTCCTCTGGAGTTCACTTCCCCTGGCTCCCCCATCCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| 3UTR CAA 72 bp | CCATTAACAGGAGAAAGCCAACCTTGGGTGGCAAAGTaGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PLTGESQPWVAK*AVVAAGWVEGI Trigger: TATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTTGGCTTTCTCCTGTTAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR TCA 90 bp | TGCCTCCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTTGCTTACACACAAGCACGTaGAGAGACACATTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLLWYLRDQAVWPGRYSCLHTST*RDTFLA Trigger: GGCCAAGAATGTGTCTCTTCACGTGCTTGTGTGTAA...GCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGGAGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR TCA 90 bp | ATGATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTCCCACGACTAGACACGGGCGGGGGATaGGCGGCACAGAACATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MIPFSSGPTPEKQAVPRLDTGGG*AAQNIL Trigger: CAGGATGTTCTGTGCCGCTCATCCCCCGCCCGTGTC...TAGTCGTGGGACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR TCA 90 bp | ATTCTCATATGTTCTCGTGGCCACACTGTGGGTAGACAGTCTAAGCCACTGGATGACACGGGCGGGGGATaGGCGGCACAGAACATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILICSRGHTVGRQSKPLDDTGGG*AAQNIL Trigger: CAGGATGTTCTGTGCCGCTCATCCCCCGCCCGTGTC...ATCCAGTGGCTTAGACTGTCTACCCACAGTGTGGCCACGAGAACATATGAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| CDS-3UTR TCA 90 bp | AGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGATAAGAGCGGAAAAGATGGAAACGGCCTGGCCAAGGTaGACAGCAGCTTGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: RPGMLPGRAEWIRAEKMETAWPR*TAACTP Trigger: GGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCCGT...TTCCATCTTTTCCGCTCTTATCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR GCA 90 bp | AAGCGACGTGGCAGGATCTGTTTCAAGTCACAGGAAGTCCGACACACCACAGCTTCTCCATGGCGGTGGTaGTCCCGTCGTATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRRGRICFKSQEVRHTTASPWRW*SRRISV Trigger: GACAGAGATACGACGGGAGCACCACCGCCATGGAGA...AGCTGTGGTGTGTCGGACTTCCTGTGACTTGAAACAGATCCTGCCACGTCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| CDS-3UTR GCA 90 bp | CCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTGATCACCACTCCTGCAGCCTCTCCATGGCGGTGGTaGTCCCGTCGTATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLSECVQDAVITTPAASPWRW*SRRISV Trigger: GACAGAGATACGACGGGAGCACCACCGCCATGGAGA...GGCTGCAGGAGTGGTGATCACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATCAGGTTATTACACACAAGCACGTaGAGAGACACATTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGKVGSGGSWVGRGDIRLLHTST*RDTFLA Trigger: GGCCAAGAATGTGTCTCTTCACGTGCTTGTGTGTAA...TAACCTGATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR TCA 90 bp | ACCGTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGGACACGGGCGGGGGATaGGCGGCACAGAACATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVQKTAKETNPHYEEDCQDTGGG*AAQNIL Trigger: CAGGATGTTCTGTGCCGCTCATCCCCCGCCCGTGTC...CTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAACGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | AACCCTTGTTCTAATCTGAGAGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGATCCACCTTGGCTTTGTaGCACTCCTCCAGGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NPCSNLRDLECFRGEQSGSTLAL*HSSRMR Trigger: CCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGA...TCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCTCTCAGATTAGAACAAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| CDS-3UTR GCA 90 bp | CCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTTGCAAATAAATGCTTCGGCAAAATaGTGCACGCTACGGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PLVPKRPGCVAWPVLLQINASAK*CTLRST Trigger: CGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGCATT...TATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGATAAGAGCGGAAAAGATGGAAGGGGAGAGGCGACGGTaGAGTTCATTGGAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPGMLPGRAEWIRAEKMEGERRR*SSLEKR Trigger: CCTCTTCTCCAATGAACTGCACCGTCGCCTCTCCCC...TTCCATCTTTTCCGCTCTTATCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGCCCAGCCGTCCTTGGTaGTTCTCTCCTCCCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TVQKTAKETNPHYEEDCQPSRPW*FSPPSP Trigger: CGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGG...CTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAACGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR CAA 72 bp | GCCTCCCCTGACTCTTCCTGCACCTTGTCGCCAATCTaGAGTGTTAAACTACATCCTGCCTCCCCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASPDSSCTLSPI*SVKLHPASPSL Trigger: CAGAGATGGGGAGGCAGGATGTAGTTTAACACTCAAGATTGGCGACAAGGTGCAGGAAGAGTCAGGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCACGGCCTGGCCAAGGTaGACAGCAGCTTGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPILRLSSGPSSHPVIITAWPR*TAACTP Trigger: GGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCCGT...GATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS-3UTR GCA 90 bp | GATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTCCCACGACTAACTCCACCTTGGCTTTGTaGCACTCCTCCAGGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSIFKRANTRKASSPTTNSTLAL*HSSRMR Trigger: CCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGA...GTTAGTCGTGGGACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR GCA 90 bp | TTTCTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTGTTCCCAGGGTGCACTaGGTTGGATGTGACCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLLPILRLSSGPSSHPVIVPRVH*VGCDPA Trigger: CGCGGGGTCACATCCAACGCAGTGCACCCTGGGAAC...AATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGAGGGACTTGGTCACACCAAGCAACCAGCTCAGAGACTCAGATGTCTTCATTGCTTCCACCTTaGCTTTGTGCCACTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKGGTWSHQATSSETQMSSLLPP*LCATPP Trigger: TGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGA...AGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTGACCAAGTCCCTCCCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR CAA 72 bp | TTATGGAGTAGAAGGGGGTGGGAGCAGACGTGTACATaGAACTGTCAGTGCCGATTGCAAGCCCTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWSRRGWEQTCT*NCQCRLQALES Trigger: GCTTTCCAGGGCTTGCAATCGGCACTGACAGTTCAATGTACACGTCTGCTCCCACCCCCTTCTACTCCATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR CAA 72 bp | TCACACCAAGCAACCAGCTCAGAGACTCAGATGTCTTaGCCTCCTCTGGTACCTAAGAGACCAGGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHQATSSETQMS*PPLVPKRPGCV Trigger: CACACAGCCTGGTCTCTTAGGTACCAGAGGAGGCAAAGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCCCCAGGTGGTTCACCTaGAAGGTTGTCTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPILRLSSGPSSHPVIIPRWFT*KVVSRP Trigger: TGGCCTGGAGACAACCTTTCAGGTGAACCACCTGGG...GATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS-3UTR GCA 90 bp | CCATTGATTGTTCTTATCTACTCTCATTGCCCTGTACTGGAGTTCAGGGCACCCTCTCCATGGCGGTGGTaGTCCCGTCGTATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLIVLIYSHCPVLEFRAPSPWRW*SRRISV Trigger: GACAGAGATACGACGGGAGCACCACCGCCATGGAGA...GGGTGCCCTGAACTCCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | GGGACATCATCTCTTGAAATTCCCTGCTTCCCACTAGTTATAACCTTCTCCCATGTGAAGTCCCGGCCCTaGAGGATCTCCATGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSSLEIPCFPLVITFSHVKSRP*RISMAV Trigger: CACCGCCATGGAGATCCTGCAGGGCCGGGACTTCAC...ATGGGAGAAGGTTATAACTAGTGGGAAGCAGGGAATTTCAAGAGATGATGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | ACCGTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGCAGGCCAGGATCACATaGGCGCCATGGAGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVQKTAKETNPHYEEDCQQARIT*APWRAK Trigger: CTTTGCCCTCCATGGCGCGCATGTGATCCTGGCCTG...CTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAACGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | CATCTTTTCTTCTTGTTCCTCCTCGGCGGTTCCAAGATTAGCAAGAGATTGTTCCGGCCTCGCTGGCTCTaGTCAGGTTCCTACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLFFLFLLGGSKISKRLFRPRWL*SGSYRP Trigger: TGGCCTGTAGGAACCTGAGCAGAGCCAGCGAGGCCG...GAACAATCTCTTGCTAATCTTGGAACCGCCGAGGAGGAACAAGAAGAAAAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCTGCTTCGGCAAAATGCTaGACGCTACGGAGCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FFQFFVFLQAPVATQSLSASAKC*TLRSTA Trigger: GGCCGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGC...AGATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGGAGAATGATACGGCCCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTAATGCTTCGGCAAAATaGTGCACGCTACGGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GWRMIRPHFAFRMCSGRSNASAK*CTLRST Trigger: CGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGCATT...ACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGGGCCGTATCATTCTCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR GCA 90 bp | GATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTCCCACGACTAACGTAGCAGCTCCCTGTTaGATGGACTTGGTGAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSIFKRANTRKASSPTTNVAAPC*MDLVNG Trigger: GCCGTTCACCAAGTCCATGCAACAGGGAGCTGCTAC...GTTAGTCGTGGGACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CCA 90 bp | CCTAGAAAAGGGACATCATCTCTTGAAATTCCCTGCTTCCCACTAGTTATAACCCCCAGCCGTCCTTGGTaGTTCTCTCCTCCCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRKGTSSLEIPCFPLVITPSRPW*FSPPSP Trigger: CGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGG...GGTTATAACTAGTGGGAAGCAGGGAATTTCAAGAGATGATGTCCCTTTTCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CCA 90 bp | ATTCTCATATGTTCTCGTGGCCACACTGTGGGTAGACAGTCTAAGCCACTGGATGGATCTCCATGGCGGTaGTGCTCCCGTCGTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILICSRGHTVGRQSKPLDGSPWR*CSRRIS Trigger: AGAGATACGACGGGAGCACCACCGCCATGGAGATCC...ATCCAGTGGCTTAGACTGTCTACCCACAGTGTGGCCACGAGAACATATGAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | AACCCTTGTTCTAATCTGAGAGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGATGTTATAAGCCAGCATaGCCCAGTAGTCGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NPCSNLRDLECFRGEQSGCYKPA*PSSRSS Trigger: CGAGGAGCGACTACTGGGCCATGCTGGCTTATAACA...TCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCTCTCAGATTAGAACAAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTGATCACCACTCCTGCAGCCTTACACACAAGCACGTaGAGAGACACATTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLSECVQDAVITTPAALHTST*RDTFLA Trigger: GGCCAAGAATGTGTCTCTTCACGTGCTTGTGTGTAA...GGCTGCAGGAGTGGTGATCACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR TCA 90 bp | GATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTCCCACGACTAACAACGGCAGCAGTTGTTaGAATACATCCCTCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSIFKRANTRKASSPTTNNGSSC*NTSLRG Trigger: GCCTCGGAGGGATGTATTTCAACAACTGCTGCCGTT...GTTAGTCGTGGGACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCTTCCACCTTGGCTTTGTaGCACTCCTCCAGGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FFQFFVFLQAPVATQSLSSTLAL*HSSRMR Trigger: CCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGA...AGATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | AAAGATGACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGAGTTCCCAGGGTGCACTaGGTTGGATGTGACCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KDDSQSSSESESSSYGERVPRVH*VGCDPA Trigger: CGCGGGGTCACATCCAACGCAGTGCACCCTGGGAAC...TCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTCATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| 3UTR CAA 72 bp | TCTTACTGTGCTGCCTCCCCTGACTCTTCCTGCACCTaGTCGCCAATCTTGAGTGTTAAACTACATCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYCAASPDSSCT*SPILSVKLHPA Trigger: GGCAGGATGTAGTTTAACACTCAAGATTGGCGACAAGGTGCAGGAAGAGTCAGGGGAGGCAGCACAGTAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| CDS-3UTR TCA 90 bp | TGTGGCCTGGCCGGTACTCTTGCAAATACACAAGAGAAGAAAACTGACCCAGAAGTTGCGATGGATGGCTaGGTACATCATGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGLAGTLANTQEKKTDPEVAMDG*VHHVPR Trigger: CCTGGGAACATGATGTACTCAGCCATCCATCGCAAC...TTCTGGGTCAGTTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS-3UTR GCA 90 bp | TCCTTCCTTGCCTGCCTAGGGAATGGTTTGCAAAATGTAAAATGCACTCGTTATCAGGCCAGGATCACATaGGCGCCATGGAGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLACLGNGLQNVKCTRYQARIT*APWRAK Trigger: CTTTGCCCTCCATGGCGCGCATGTGATCCTGGCCTG...ATAACGAGTGCATTTTACATTTTGCAAACCATTCCCTAGGCAGGCAAGGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR GCA 90 bp | AAAGATGACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGACAGGCCAGGATCACATaGGCGCCATGGAGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDDSQSSSESESSSYGERQARIT*APWRAK Trigger: CTTTGCCCTCCATGGCGCGCATGTGATCCTGGCCTG...TCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTCATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATGACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGAGCTTCGGCAAAATGCTaGACGCTACGGAGCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDDSQSSSESESSSYGERASAKC*TLRSTA Trigger: GGCCGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGC...TCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTCATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGAGTGGATCTCCATGGCGGTaGTGCTCCCGTCGTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQKTAKETNPHYEEDCQSGSPWR*CSRRIS Trigger: AGAGATACGACGGGAGCACCACCGCCATGGAGATCC...ACTCTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCTGTTATAAGCCAGCATaGCCCAGTAGTCGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLPILRLSSGPSSHPVIICYKPA*PSSRSS Trigger: CGAGGAGCGACTACTGGGCCATGCTGGCTTATAACA...GATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| 3UTR CAA 72 bp | CCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTaGCAAATACACAAGAGAAGAAAACTGACCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKRPGCVAWPVL*QIHKRRKLTQK Trigger: TTTCTGGGTCAGTTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTCAGGTCCAGGGTCATTaGTTCCACCTTGGCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLPILRLSSGPSSHPVIQVQGH*FHLGFV Trigger: CACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTG...AATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCTTGCCTGCCTAGGGAATGGTTTGCAAAATGTAAAATGCACTCGTTATGGATCTCCATGGCGGTaGTGCTCCCGTCGTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLACLGNGLQNVKCTRYGSPWR*CSRRIS Trigger: AGAGATACGACGGGAGCACCACCGCCATGGAGATCC...ATAACGAGTGCATTTTACATTTTGCAAACCATTCCCTAGGCAGGCAAGGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCTGGAGGGCAAAGGACTTaGCAGTCTCGAACCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: FFQFFVFLQAPVATQSLSGGQRT*QSRTLF Trigger: GAATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCC...AGATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CCA 90 bp | CCATTGATTGTTCTTATCTACTCTCATTGCCCTGTACTGGAGTTCAGGGCACCCTCATTGCTTCCACCTTaGCTTTGTGCCACTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLIVLIYSHCPVLEFRAPSLLPP*LCATPP Trigger: TGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGA...GGGTGCCCTGAACTCCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CCA 90 bp | GACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGAGCTAAGTCATTGCTTCCACCTTaGCTTTGTGCCACTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSQSSSESESSSYGERAKSLLPP*LCATPP Trigger: TGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGA...CTTAGCTCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCTGGCCGGTACTCTTGCAAATACACAAGAGAAGAAAACTGACCCAGAAACCCATGAGTTGCGATaGATGGCTGAGTACATCATG | + |
|
Preference number: 4 (lower is better) Translates to: CGLAGTLANTQEKKTDPETHELR*MAEYIM Trigger: CATGATGTACTCAGCCATCCATCGCAACTCATGGGT...TTCTGGGTCAGTTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR TCA 90 bp | ATAGAAAATCACGTGTGCTTTTACAATGAGCAAGGGAACCTACATGCTAACCATCCCAGGTGGTTCACCTaGAAGGTTGTCTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IENHVCFYNEQGNLHANHPRWFT*KVVSRP Trigger: TGGCCTGGAGACAACCTTTCAGGTGAACCACCTGGG...ATGGTTAGCATGTAGGTTCCCTTGCTCATTGTAAAAGCACACGTGATTTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR TCA 90 bp | CCTAGAAAAGGGACATCATCTCTTGAAATTCCCTGCTTCCCACTAGTTATAACCGTTGCGATGGATGGCTaGGTACATCATGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRKGTSSLEIPCFPLVITVAMDG*VHHVPR Trigger: CCTGGGAACATGATGTACTCAGCCATCCATCGCAAC...GGTTATAACTAGTGGGAAGCAGGGAATTTCAAGAGATGATGTCCCTTTTCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCTTGCCTGCCTAGGGAATGGTTTGCAAAATGTAAAATGCACTCGTTATCAGGTCCAGGGTCATTaGTTCCACCTTGGCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLACLGNGLQNVKCTRYQVQGH*FHLGFV Trigger: CACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTG...ATAACGAGTGCATTTTACATTTTGCAAACCATTCCCTAGGCAGGCAAGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR GCA 90 bp | ATGATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTCCCACGACTAATTCTTGGCCTTGAATaGTTCGGCAAAATGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MIPFSSGPTPEKQAVPRLILGLE*FGKMLH Trigger: GTGCAGCATTTTGCCGAAGCATTCAAGGCCAAGAAT...TAGTCGTGGGACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR GCA 90 bp | ATTCTCATATGTTCTCGTGGCCACACTGTGGGTAGACAGTCTAAGCCACTGGATATTCTTGGCCTTGAATaGTTCGGCAAAATGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILICSRGHTVGRQSKPLDILGLE*FGKMLH Trigger: GTGCAGCATTTTGCCGAAGCATTCAAGGCCAAGAAT...ATCCAGTGGCTTAGACTGTCTACCCACAGTGTGGCCACGAGAACATATGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCAAAATAAGAACAAAGGTCTGGATGCAGGTAACCTTGACTTACAGAATGGATCTCCATGGCGGTaGTGCTCCCGTCGTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKQNKNKGLDAGNLDLQNGSPWR*CSRRIS Trigger: AGAGATACGACGGGAGCACCACCGCCATGGAGATCC...ATTCTGTAAGTCAAGGTTACCTGCATCCAGACCTTTGTTCTTATTTTGCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| CDS-3UTR CCA 90 bp | CATGCTAACCATGATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTACCCATGAGTTGCGATaGATGGCTGAGTACATCATG | + |
|
Preference number: 4 (lower is better) Translates to: HANHDSIFKRANTRKASSTHELR*MAEYIM Trigger: CATGATGTACTCAGCCATCCATCGCAACTCATGGGT...ACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATCATGGTTAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR CAA 72 bp | CTCTTTTTCTCTGAGTCGGGCTCTCATCTTTTCTTCTaGTTCCTCCTCGGCGGTTCCAAGATTAGCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFFSESGSHLFF*FLLGGSKISKR Trigger: TCTCTTGCTAATCTTGGAACCGCCGAGGAGGAACAAGAAGAAAAGATGAGAGCCCGACTCAGAGAAAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS-3UTR CCA 90 bp | GACGATCGACTTAATTTCGGAGAGTGGGAGCAGGGAAAGATGACTCACAGAGCAGGTAAATGCCAATCTTaGATCCAAGTAGGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DDRLNFGEWEQGKMTHRAGKCQS*IQVGSS Trigger: AGAACTACCTACTTGGATCCAAGATTGGCATTTACC...TGCTCTGTGAGTCATCTTTCCCTGCTCCCACTCTCCGAAATTAAGTCGATCGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| CDS-3UTR GCA 90 bp | GTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGAGTATTCTTGGCCTTGAATaGTTCGGCAAAATGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQKTAKETNPHYEEDCQSILGLE*FGKMLH Trigger: GTGCAGCATTTTGCCGAAGCATTCAAGGCCAAGAAT...ACTCTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS-3UTR CCA 90 bp | CCATTGATTGTTCTTATCTACTCTCATTGCCCTGTACTGGAGTTCAGGGCACCCGGTAAATGCCAATCTTaGATCCAAGTAGGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLIVLIYSHCPVLEFRAPGKCQS*IQVGSS Trigger: AGAACTACCTACTTGGATCCAAGATTGGCATTTACC...GGGTGCCCTGAACTCCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR CCA 90 bp | TGTGGCCTGGCCGGTACTCTTGCAAATACACAAGAGAAGAAAACTGACCCAGAAGGTAAATGCCAATCTTaGATCCAAGTAGGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGLAGTLANTQEKKTDPEGKCQS*IQVGSS Trigger: AGAACTACCTACTTGGATCCAAGATTGGCATTTACC...TTCTGGGTCAGTTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS-3UTR CCA 90 bp | AAAGATGACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGAACCCATGAGTTGCGATaGATGGCTGAGTACATCATG | + |
|
Preference number: 4 (lower is better) Translates to: KDDSQSSSESESSSYGERTHELR*MAEYIM Trigger: CATGATGTACTCAGCCATCCATCGCAACTCATGGGT...TCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTCATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| 3UTR CAA 72 bp | CTCGTTATAATCTCTAAAGAATTGCTTGTGTTAACTTaGGCAAGGAGGTCAGGGAATGGTGCTTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVIISKELLVLT*ARRSGNGASGN Trigger: GTTCCCAGAAGCACCATTCCCTGACCTCCTTGCCAAAGTTAACACAAGCAATTCTTTAGAGATTATAACGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| 3UTR CAA 72 bp | CTCCCCATCTCTGTGCAGTCAACAAACATGTTGACTTaGGGTCCTGGAATTCTGGAGAAAGCCAATTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPISVQSTNMLT*GPGILEKANLN Trigger: ATTTAAATTGGCTTTCTCCAGAATTCCAGGACCCAAAGTCAACATGTTTGTTGACTGCACAGAGATGGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| 3UTR CAA 72 bp | AATTCCCTGCTTCCCACTAGTTATAACCTTCTCCCATaGATTGTTCTTATCTACTCTCATTGCCCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLLPTSYNLLP*IVLIYSHCPVL Trigger: CAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGGGAGAAGGTTATAACTAGTGGGAAGCAGGGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR CCA 90 bp | TCCAGTGGTCCTAACACGCCCAGGCATGACTTTGTTTTCTATGTACTAACTTTAGGTAAATGCCAATCTTaGATCCAAGTAGGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGPNTPRHDFVFYVLTLGKCQS*IQVGSS Trigger: AGAACTACCTACTTGGATCCAAGATTGGCATTTACC...TAAAGTTAGTACATAGAAAACAAAGTCATGCCTGGGCGTGTTAGGACCACTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
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| CDS GCA 90 bp | CGGAGCACGGCCAGGTCCAGGGTCATTGCTTCCACCTTGGCTTTGTaGCACTCCTCCAGGATGCGGGACACGGCCTCGCTGGCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSTARSRVIASTLAL*HSSRMRDTASLALL Trigger: GAGCAGAGCCAGCGAGGCCGTGTCCCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGTGCTCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 90 bp | CTTTGTGCCACTCCTCCAGGATGCGGGACACGGCCTCGCTGGCTCTaGTCAGGTTCCTACAGGCCAGGATCACATGCGCGCCATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCATPPGCGTRPRWL*SGSYRPGSHARHGG Trigger: CCCTCCATGGCGCGCATGTGATCCTGGCCTGTAGGAACCTGAGCAGAGCCAGCGAGGCCGTGTCCCGCATCCTGGAGGAGTGGCACAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 90 bp | ACCCATGAGTTGCGATGGATGGCTGAGTACATCATGTTCCCAGGGTaGACTGCGTTGGATGTGACCCCGCGCGGGGAGAGGCGACGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: THELRWMAEYIMFPG*TALDVTPRGERRRC Trigger: GCACCGTCGCCTCTCCCCGCGCGGGGTCACATCCAACGCAGTGCACCCTGGGAACATGATGTACTCAGCCATCCATCGCAACTCATGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 90 bp | GGCAAAATGCTGCACGCTACGGAGCACGGCCAGGTCCAGGGTCATTaGTTCCACCTTGGCTTTGTGCCACTCCTCCAGGATGCGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GKMLHATEHGQVQGH*FHLGFVPLLQDAGH Trigger: GTGTCCCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGTGCTCCGTAGCGTGCAGCATTTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 90 bp | TTTGCTCCAGTAACCAGGACCACCTTGCCTGTGAAGTCCCGGCCCTaGAGGATCTCCATGGCGGTGGTGCTCCCGTCGTATCTCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FAPVTRTTLPVKSRP*RISMAVVLPSYLCL Trigger: CAGACAGAGATACGACGGGAGCACCACCGCCATGGAGATCCTGCAGGGCCGGGACTTCACAGGCAAGGTGGTCCTGGTTACTGGAGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 90 bp | ACGGCCTCGCTGGCTCTGCTCAGGTTCCTACAGGCCAGGATCACATaGGCGCCATGGAGGGCAAAGGACTTGGCAGTCTCGAACCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: TASLALLRFLQARIT*APWRAKDLAVSNPI Trigger: AATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCATGGCGCGCATGTGATCCTGGCCTGTAGGAACCTGAGCAGAGCCAGCGAGGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 90 bp | TCTTCTCCTCAGTGTGATTGGCGTAGTACACCCAGCCGTCCTTGGTaGTTCTCTCCTCCCAGCCCGGAGGCAGCTCATCCTCACTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSPQCDWRSTPSRPW*FSPPSPEAAHPHCP Trigger: CGGACAGTGAGGATGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTACTACGCCAATCACACTGAGGAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS CCA 90 bp | GGGTCTTCTCCTCAGTGTGATTGGCGTAGTACACCCAGCCGTCCTTaGTGGTTCTCTCCTCCCAGCCCGGAGGCAGCTCATCCTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSSPQCDWRSTPSRP*WFSPPSPEAAHPHC Trigger: ACAGTGAGGATGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTACTACGCCAATCACACTGAGGAGAAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS CCA 90 bp | TTCCCACAGGGCCCGAGCTGTCTCTTCACTCTGAGCCTCCTCGGATaGCAGGCAACGGCAGCAGTTGTTGAAATACATCCCTCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPQGPSCLFTLSLLG*QATAAVVEIHPSEA Trigger: GGCCTCGGAGGGATGTATTTCAACAACTGCTGCCGTTGCCTGCCATCCGAGGAGGCTCAGAGTGAAGAGACAGCTCGGGCCCTGTGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | AACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATTACACCCAGCCGTCCTaGGTGGTTCTCTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLGWQSWQWWQLGGSRGYYTQPS*VVLSSQ Trigger: CTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTA...ATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | GGGCTGACTAGAGCTGGGGCTGGTCATGTGGAACCGAGAACCCAGGTACCCTCTGCTTCCACCTTGGCTTaGTGCCACTCCTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLTRAGAGHVEPRTQVPSASTLA*CHSSRM Trigger: CATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGC...AGAGGGTACCTGGGTTCTCGGTTCCACATGACCAGCCCCAGCTCTAGTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | AACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATGCTTCCACCTTGGCTTaGTGCCACTCCTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NLGWQSWQWWQLGGSRGYASTLA*CHSSRM Trigger: CATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGC...ATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | GGGCTGACTAGAGCTGGGGCTGGTCATGTGGAACCGAGAACCCAGGTACCCTCTCCAGGTCCAGGGTCATaGCTTCCACCTTGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLTRAGAGHVEPRTQVPSPGPGS*LPPWLC Trigger: ACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGG...AGAGGGTACCTGGGTTCTCGGTTCCACATGACCAGCCCCAGCTCTAGTCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS TCA 90 bp | GTCCCAGGTGGTTCACCTGAAAGGTTGTCTCCAGGCCATCCTTCGTaGGGCCCCAGGGCAGAGCAAACGTCCCTGCATTACACACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPGGSPERLSPGHPS*GPRAEQTSLHYTQA Trigger: TGCTTGTGTGTAATGCAGGGACGTTTGCTCTGCCCTGGGGCCTCACGAAGGATGGCCTGGAGACAACCTTTCAGGTGAACCACCTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS TCA 90 bp | AGCCTCTCACTGAGTTCCCACAGGGCCCGAGCTGTCTCTTCACTCTaGGCCTCCTCGGATGGCAGGCAACGGCAGCAGTTGTTGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSSHRARAVSSL*ASSDGRQRQQLLKY Trigger: GTATTTCAACAACTGCTGCCGTTGCCTGCCATCCGAGGAGGCTCAGAGTGAAGAGACAGCTCGGGCCCTGTGGGAACTCAGTGAGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTTGCAAATATACACCCAGCCGTCCTaGGTGGTTCTCTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLVPKRPGCVAWPVLLQIYTQPS*VVLSSQ Trigger: CTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTA...TATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CAA 90 bp | AACCTTGGGTGGCAAAGTTGGCAGTGGTGGCAGCTGGGTGGGTCGAGGGGATATGGTTCACCTGAAAGGTaGTCTCCAGGCCATCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: NLGWQSWQWWQLGGSRGYGSPER*SPGHPS Trigger: CGAAGGATGGCCTGGAGACAACCTTTCAGGTGAACC...ATATCCCCTCGACCCACCCAGCTGCCACCACTGCCAACTTTGCCACCCAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS CCA 90 bp | CTGGCTCTGCTCAGGTTCCTACAGGCCAGGATCACATGCGCGCCATaGAGGGCAAAGGACTTGGCAGTCTCGAACCCTATTCCCGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LALLRFLQARITCAP*RAKDLAVSNPIPEF Trigger: AAATTCGGGAATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCATGGCGCGCATGTGATCCTGGCCTGTAGGAACCTGAGCAGAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGGGCTGGTCATGTGGAACCGAGAACCCAGGTACCCTCTGATTAATTCTTACACCCAGCCGTCCTaGGTGGTTCTCTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELGLVMWNREPRYPLINSYTQPS*VVLSSQ Trigger: CTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTA...AGAATTAATCAGAGGGTACCTGGGTTCTCGGTTCCACATGACCAGCCCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS GCA 90 bp | CTCCAGGCCATCCTTCGTGAGGCCCCAGGGCAGAGCAAACGTCCCTaGATTACACACAAGCACGTGAAGAGACACATTCTTGGCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQAILREAPGQSKRP*ITHKHVKRHILGLE Trigger: TTCAAGGCCAAGAATGTGTCTCTTCACGTGCTTGTGTGTAATGCAGGGACGTTTGCTCTGCCCTGGGGCCTCACGAAGGATGGCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS GCA 90 bp | GGGTGCACTGCGTTGGATGTGACCCCGCGCGGGGAGAGGCGACGGTaGAGTTCATTGGAGAAGAGGATATTGCAGAGTTTAGATCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GCTALDVTPRGERRR*SSLEKRILQSLDLL Trigger: TAACAGATCTAAACTCTGCAATATCCTCTTCTCCAATGAACTGCACCGTCGCCTCTCCCCGCGCGGGGTCACATCCAACGCAGTGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS CCA 90 bp | GGCCTGGCCAAGGTGAACAGCAGCTTGTACACCCATGAGTTGCGATaGATGGCTGAGTACATCATGTTCCCAGGGTGCACTGCGTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLAKVNSSLYTHELR*MAEYIMFPGCTALD Trigger: ATCCAACGCAGTGCACCCTGGGAACATGATGTACTCAGCCATCCATCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTACCTAAGAGACCAGGCTGTGTGGCCTGGCCGGTACTCTTGCAAATAGGTTCACCTGAAAGGTaGTCTCCAGGCCATCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PLVPKRPGCVAWPVLLQIGSPER*SPGHPS Trigger: CGAAGGATGGCCTGGAGACAACCTTTCAGGTGAACC...TATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGGTCTCTTAGGTACCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CAA 90 bp | CATAGGATGGGGGAGCCAGGGGAAGTGAACTCCAGAGGACTTAGAGGCTGGGACCGACGGTGCAGTTCATaGGAGAAGAGGATATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRMGEPGEVNSRGLRGWDRRCSS*EKRILQ Trigger: CTGCAATATCCTCTTCTCCAATGAACTGCACCGTCG...GTCCCAGCCTCTAAGTCCTCTGGAGTTCACTTCCCCTGGCTCCCCCATCCTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGGTCAGGGAATGGTGCTTCTGGGAACCACCAGCTCTGCACACCACACCAAGGTGAACAGCAGCTaGTACACCCATGAGTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QGGQGMVLLGTTSSAHHTKVNSS*YTHELR Trigger: TCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTT...GGTGTGGTGTGCAGAGCTGGTGGTTCCCAGAAGCACCATTCCCTGACCTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS GCA 90 bp | CCTGTTCCCATCCATACGGCAAATCTCCTGCGACCCGTTTCCTCTTaGCGGTTTTCGGATGTTCCCACTGGGTCTTCTCCTCAGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVPIHTANLLRPVSS*RFSDVPTGSSPQCD Trigger: ATCACACTGAGGAGAAGACCCAGTGGGAACATCCGAAAACCGGCAAGAGGAAACGGGTCGCAGGAGATTTGCCGTATGGATGGGAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | CCATTGATTGTTCTTATCTACTCTCATTGCCCTGTACTGGAGTTCAGGGCACCCGTAACCAGGACCACCTaGCCTGTGAAGTCCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLIVLIYSHCPVLEFRAPVTRTT*PVKSRP Trigger: GGGCCGGGACTTCACAGGCAAGGTGGTCCTGGTTAC...GGGTGCCCTGAACTCCAGTACAGGGCAATGAGAGTAGATAAGAACAATCAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS TCA 90 bp | TCCCTGCATTACACACAAGCACGTGAAGAGACACATTCTTGGCCTTaGATGCTTCGGCAAAATGCTGCACGCTACGGAGCACGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLHYTQAREETHSWP*MLRQNAARYGARPG Trigger: ACCTGGCCGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGCATTCAAGGCCAAGAATGTGTCTCTTCACGTGCTTGTGTGTAATGCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGAGGGACTTGGTCACACCAAGCAACCAGCTCAGAGACTCAGATGTCTTTGTCATTGCTTCCACCTaGGCTTTGTGCCACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRDLVTPSNQLRDSDVFVIAST*ALCHSS Trigger: GGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGAC...AAAGACATCTGAGTCTCTGAGCTGGTTGCTTGGTGTGACCAAGTCCCTCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS CCA 90 bp | TTTAGATCTGTTATAAGCCAGCATGGCCCAGTAGTCGCTCCTCGGTaGAGACAGGCGGCTGAGGTCAAGTTTCCCGGAGGAGTCATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FRSVISQHGPVVAPR*RQAAEVKFPGGVIN Trigger: ATTAATGACTCCTCCGGGAAACTTGACCTCAGCCGCCTGTCTCCACCGAGGAGCGACTACTGGGCCATGCTGGCTTATAACAGATCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS-3UTR CAA 90 bp | GAGCTGGGGCTGGTCATGTGGAACCGAGAACCCAGGTACCCTCTGATTAATTCTTTGTACACCCATGAGTaGCGATGGATGGCTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ELGLVMWNREPRYPLINSLYTHE*RWMAEY Trigger: GTACTCAGCCATCCATCGCAACTCATGGGTGTACAA...AGAATTAATCAGAGGGTACCTGGGTTCTCGGTTCCACATGACCAGCCCCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | CCCACTTTGCTTTCAGAATGTGTTCAGGACGCAGTGATCACCACTCCTGCAGCCAAGGTGAACAGCAGCTaGTACACCCATGAGTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PTLLSECVQDAVITTPAAKVNSS*YTHELR Trigger: TCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTT...GGCTGCAGGAGTGGTGATCACTGCGTCCTGAACACATTCTGAAAGCAAAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | GATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTCCCACGACTAACTGGAGGGCAAAGGACTaGGCAGTCTCGAACCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: DSIFKRANTRKASSPTTNWRAKD*AVSNPI Trigger: AATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCA...GTTAGTCGTGGGACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTGCTTCCACCTTGGCTTaGTGCCACTCCTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: FLLPILRLSSGPSSHPVIASTLA*CHSSRM Trigger: CATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGC...AATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CAA 90 bp | AACCCTTGTTCTAATCTGAGAGACCTGGAATGCTTCCGGGGAGAGCAGAGTGGACGACGGTGCAGTTCATaGGAGAAGAGGATATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NPCSNLRDLECFRGEQSGRRCSS*EKRILQ Trigger: CTGCAATATCCTCTTCTCCAATGAACTGCACCGTCG...TCCACTCTGCTCTCCCCGGAAGCATTCCAGGTCTCTCAGATTAGAACAAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTGTGTGGCCTGGCCGGTACTCTTGCAAATACACAAGAGAAGAAAACTGAAGGTGAACAGCAGCTaGTACACCCATGAGTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PGCVAWPVLLQIHKRRKLKVNSS*YTHELR Trigger: TCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTT...CAGTTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACACAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CAA 90 bp | CATGCTAACCATGATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTGTCATTGCTTCCACCTaGGCTTTGTGCCACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HANHDSIFKRANTRKASSVIAST*ALCHSS Trigger: GGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGAC...ACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATCATGGTTAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR CAA 90 bp | GACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGAGCTAAGGTCATTGCTTCCACCTaGGCTTTGTGCCACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSQSSSESESSSYGERAKVIAST*ALCHSS Trigger: GGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGAC...CTTAGCTCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| CDS-3UTR CAA 90 bp | TTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCTCCAGGTCCAGGGTCATaGCTTCCACCTTGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FFQFFVFLQAPVATQSLSPGPGS*LPPWLC Trigger: ACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGG...AGATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CAA 90 bp | GATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTCCCACGACTAACTTGTACACCCATGAGTaGCGATGGATGGCTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DSIFKRANTRKASSPTTNLYTHE*RWMAEY Trigger: GTACTCAGCCATCCATCGCAACTCATGGGTGTACAA...GTTAGTCGTGGGACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR CAA 90 bp | ACCGTTCAGAAAACTGCCAAGGAGACAAACCCCCATTATGAAGAAGATTGCCAGTGGAGGGCAAAGGACTaGGCAGTCTCGAACCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: TVQKTAKETNPHYEEDCQWRAKD*AVSNPI Trigger: AATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCA...CTGGCAATCTTCTTCATAATGGGGGTTTGTCTCCTTGGCAGTTTTCTGAACGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS-3UTR CAA 90 bp | GCTAAAGAAGATGTTCTTGGAACTGTGAGTGAAGACTGGAGGGAACTACTTCCTCCAGGTCCAGGGTCATaGCTTCCACCTTGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AKEDVLGTVSEDWRELLPPGPGS*LPPWLC Trigger: ACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGG...AGGAAGTAGTTCCCTCCAGTCTTCACTCACAGTTCCAAGAACATCTTCTTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS-3UTR CAA 90 bp | TGTGGCCTGGCCGGTACTCTTGCAAATACACAAGAGAAGAAAACTGACCCAGAATTGTACACCCATGAGTaGCGATGGATGGCTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CGLAGTLANTQEKKTDPELYTHE*RWMAEY Trigger: GTACTCAGCCATCCATCGCAACTCATGGGTGTACAA...TTCTGGGTCAGTTTTCTTCTCTTGTGTATTTGCAAGAGTACCGGCCAGGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CAA 90 bp | CATGCTAACCATGATTCCATTTTCAAGCGGGCCAACACCAGAAAAGCAAGCAGTAGGCAACGGCAGCAGTaGTTGAAATACATCCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HANHDSIFKRANTRKASSRQRQQ*LKYIPP Trigger: CGGAGGGATGTATTTCAACAACTGCTGCCGTTGCCT...ACTGCTTGCTTTTCTGGTGTTGGCCCGCTTGAAAATGGAATCATGGTTAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | AAAGATGACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGAGGTTCACCTGAAAGGTaGTCTCCAGGCCATCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KDDSQSSSESESSSYGERGSPER*SPGHPS Trigger: CGAAGGATGGCCTGGAGACAACCTTTCAGGTGAACC...TCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTCATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCAATTCTTCGTCTTTCTTCAGGCCCCAGTAGCCACCCAGTCATTATCTCGACGGTGCAGTTCATaGGAGAAGAGGATATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFQFFVFLQAPVATQSLSRRCSS*EKRILQ Trigger: CTGCAATATCCTCTTCTCCAATGAACTGCACCGTCG...AGATAATGACTGGGTGGCTACTGGGGCCTGAAGAAAGACGAAGAATTGGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
||
| CDS-3UTR CAA 90 bp | ACACTGTGGGTAGACAGTCTAAGCCACTGGATGGCTGATTCTTCTATTTTACAATGGAGGGCAAAGGACTaGGCAGTCTCGAACCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: TLWVDSLSHWMADSSILQWRAKD*AVSNPI Trigger: AATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCA...TTGTAAAATAGAAGAATCAGCCATCCAGTGGCTTAGACTGTCTACCCACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGAAAAGGGACATCATCTCTTGAAATTCCCTGCTTCCCACTAGTTATAACCCAACGGCAGCAGTTGTaGAAATACATCCCTCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRKGTSSLEIPCFPLVITQRQQL*KYIPPR Trigger: CCTCGGAGGGATGTATTTCAACAACTGCTGCCGTTG...GGTTATAACTAGTGGGAAGCAGGGAATTTCAAGAGATGATGTCCCTTTTCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS-3UTR CAA 90 bp | AAAGATGACTCACAGAGCAGCTCAGAGTCAGAATCCTCTTCTTATGGAGAAAGATACAGAATCATGGACTaGGTGAACGGCCTGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KDDSQSSSESESSSYGERYRIMD*VNGLAK Trigger: CTTGGCCAGGCCGTTCACCAAGTCCATGATTCTGTA...TCTTTCTCCATAAGAAGAGGATTCTGACTCTGAGCTGCTCTGTGAGTCATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
||
| CDS GCA 90 bp | TCTCTGTCTGGTGGTCGGCTTCGTCGGATTATCGTCCACGGTAAATaGCAATCTTGGATCCAAGTAGGTAGTTCTTTTATTTATGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSGGRLRRIIVHGK*QSWIQVGSSFIYVV Trigger: GACCACATAAATAAAAGAACTACCTACTTGGATCCAAGATTGGCATTTACCGTGGACGATAATCCGACGAAGCCGACCACCAGACAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGCTACTTTACGAATTACCTACAGTGTGAATATCAAATTTGTTAAGAGATACACCCAGCCGTCCTaGGTGGTTCTCTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGATLRITYSVNIKFVKRYTQPS*VVLSSQ Trigger: CTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTA...TCTCTTAACAAATTTGATATTCACACTGTAGGTAATTCGTAAAGTAGCCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109107.3 |
||
| CDS CCA 90 bp | GGTGGTCGGCTTCGTCGGATTATCGTCCACGGTAAATGCCAATCTTaGATCCAAGTAGGTAGTTCTTTTATTTATGTGGTCAACGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGRLRRIIVHGKCQS*IQVGSSFIYVVNEK Trigger: TTTTTCGTTGACCACATAAATAAAAGAACTACCTACTTGGATCCAAGATTGGCATTTACCGTGGACGATAATCCGACGAAGCCGACCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS GCA 72 bp | ACTCCTCCAGGATGCGGGACACGGCCTCGCTGGCTCTaGTCAGGTTCCTACAGGCCAGGATCACATGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TPPGCGTRPRWL*SGSYRPGSHAR Trigger: GCGCGCATGTGATCCTGGCCTGTAGGAACCTGAGCAGAGCCAGCGAGGCCGTGTCCCGCATCCTGGAGGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS CAA 90 bp | TGCACGCTACGGAGCACGGCCAGGTCCAGGGTCATTGCTTCCACCTaGGCTTTGTGCCACTCCTCCAGGATGCGGGACACGGCCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CTLRSTARSRVIAST*ALCHSSRMRDTASL Trigger: CAGCGAGGCCGTGTCCCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGTGCTCCGTAGCGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS GCA 72 bp | GCCAGGTCCAGGGTCATTGCTTCCACCTTGGCTTTGTaGCACTCCTCCAGGATGCGGGACACGGCCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ARSRVIASTLAL*HSSRMRDTASL Trigger: CAGCGAGGCCGTGTCCCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS CCA 72 bp | GGAGCACGGCCAGGTCCAGGGTCATTGCTTCCACCTTaGCTTTGTGCCACTCCTCCAGGATGCGGGACACGG | + |
|
Preference number: 6 (lower is better) Translates to: GARPGPGSLLPP*LCATPPGCGTR Trigger: CCGTGTCCCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGTGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS CAA 72 bp | ACGGCCAGGTCCAGGGTCATTGCTTCCACCTTGGCTTaGTGCCACTCCTCCAGGATGCGGGACACGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TARSRVIASTLA*CHSSRMRDTAS Trigger: CGAGGCCGTGTCCCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
||
| CDS TCA 72 bp | GAGCCTCCTCGGATGGCAGGCAACGGCAGCAGTTGTTaGAATACATCCCTCCGAGGCCCTCCAGCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EPPRMAGNGSSC*NTSLRGPPALG Trigger: CCCCAGAGCTGGAGGGCCTCGGAGGGATGTATTTCAACAACTGCTGCCGTTGCCTGCCATCCGAGGAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
||
| CDS TCA 72 bp | CTGAGTTCCCACAGGGCCCGAGCTGTCTCTTCACTCTaGGCCTCCTCGGATGGCAGGCAACGGCAGCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSHRARAVSSL*ASSDGRQRQQL Trigger: CAACTGCTGCCGTTGCCTGCCATCCGAGGAGGCTCAGAGTGAAGAGACAGCTCGGGCCCTGTGGGAACTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS GCA 72 bp | GTAACCAGGACCACCTTGCCTGTGAAGTCCCGGCCCTaGAGGATCTCCATGGCGGTGGTGCTCCCGTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: VTRTTLPVKSRP*RISMAVVLPSY Trigger: ATACGACGGGAGCACCACCGCCATGGAGATCCTGCAGGGCCGGGACTTCACAGGCAAGGTGGTCCTGGTTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | TGTGCCACTCCTCCAGGATGCGGGACACGGCCTCGCTaGCTCTGCTCAGGTTCCTACAGGCCAGGATCACAT | + |
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Preference number: 6 (lower is better) Translates to: CATPPGCGTRPR*LCSGSYRPGSH Trigger: ATGTGATCCTGGCCTGTAGGAACCTGAGCAGAGCCAGCGAGGCCGTGTCCCGCATCCTGGAGGAGTGGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CAA 72 bp | GCTGCACGCTACGGAGCACGGCCAGGTCCAGGGTCATaGCTTCCACCTTGGCTTTGTGCCACTCCTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AARYGARPGPGS*LPPWLCATPPG Trigger: TCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGTGCTCCGTAGCGTGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CAA 90 bp | CGGCAAAATGCTGCACGCTACGGAGCACGGCCAGGTCCAGGGTCATaGCTTCCACCTTGGCTTTGTGCCACTCCTCCAGGATGCGGGACA | + |
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Preference number: 6 (lower is better) Translates to: RQNAARYGARPGPGS*LPPWLCATPPGCGT Trigger: TGTCCCGCATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGTGCTCCGTAGCGTGCAGCATTTTGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | CTGCACGCTACGGAGCACGGCCAGGTCCAGGGTCATTaGTTCCACCTTGGCTTTGTGCCACTCCTCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LHATEHGQVQGH*FHLGFVPLLQD Trigger: ATCCTGGAGGAGTGGCACAAAGCCAAGGTGGAAGCAATGACCCTGGACCTGGCCGTGCTCCGTAGCGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | TTGCGATGGATGGCTGAGTACATCATGTTCCCAGGGTaGACTGCGTTGGATGTGACCCCGCGCGGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRWMAEYIMFPG*TALDVTPRGER Trigger: CCTCTCCCCGCGCGGGGTCACATCCAACGCAGTGCACCCTGGGAACATGATGTACTCAGCCATCCATCGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | CAGTGTGATTGGCGTAGTACACCCAGCCGTCCTTGGTaGTTCTCTCCTCCCAGCCCGGAGGCAGCTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: QCDWRSTPSRPW*FSPPSPEAAHP Trigger: AGGATGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTACTACGCCAATCACACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | CCTCAGTGTGATTGGCGTAGTACACCCAGCCGTCCTTaGTGGTTCTCTCCTCCCAGCCCGGAGGCAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PQCDWRSTPSRP*WFSPPSPEAAH Trigger: ATGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTGTACTACGCCAATCACACTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | GTTATAAGCCAGCATGGCCCAGTAGTCGCTCCTCGGTaGAGACAGGCGGCTGAGGTCAAGTTTCCCGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VISQHGPVVAPR*RQAAEVKFPGG Trigger: TCCTCCGGGAAACTTGACCTCAGCCGCCTGTCTCCACCGAGGAGCGACTACTGGGCCATGCTGGCTTATAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | GTTGTTGAAATACATCCCTCCGAGGCCCTCCAGCTCTaGGGCGACTGCACAGTAGACAGTGGTAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VVEIHPSEALQL*GDCTVDSGSSS Trigger: GGAGCTGCTACCACTGTCTACTGTGCAGTCGCCCCAGAGCTGGAGGGCCTCGGAGGGATGTATTTCAACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS CCA 72 bp | GGCCCGAGCTGTCTCTTCACTCTGAGCCTCCTCGGATaGCAGGCAACGGCAGCAGTTGTTGAAATACATCCC | + |
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Preference number: 6 (lower is better) Translates to: GPSCLFTLSLLG*QATAAVVEIHP Trigger: GGGATGTATTTCAACAACTGCTGCCGTTGCCTGCCATCCGAGGAGGCTCAGAGTGAAGAGACAGCTCGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS CAA 90 bp | GTGAACGGCCTGGCCAAGGTGAACAGCAGCTTGTACACCCATGAGTaGCGATGGATGGCTGAGTACATCATGTTCCCAGGGTGCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: VNGLAKVNSSLYTHE*RWMAEYIMFPGCTA Trigger: CGCAGTGCACCCTGGGAACATGATGTACTCAGCCATCCATCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCCGTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | AGAGACACATTCTTGGCCTTGAATGCTTCGGCAAAATaGTGCACGCTACGGAGCACGGCCAGGTCCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RDTFLALNASAK*CTLRSTARSRV Trigger: GACCCTGGACCTGGCCGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGCATTCAAGGCCAAGAATGTGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | GCGTTGGATGTGACCCCGCGCGGGGAGAGGCGACGGTaGAGTTCATTGGAGAAGAGGATATTGCAGAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: ALDVTPRGERRR*SSLEKRILQSL Trigger: TAAACTCTGCAATATCCTCTTCTCCAATGAACTGCACCGTCGCCTCTCCCCGCGCGGGGTCACATCCAACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | CCAGGATCACATGCGCGCCATGGAGGGCAAAGGACTTaGCAGTCTCGAACCCTATTCCCGAATTTGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGSHARHGGQRT*QSRTLFPNLLQ Trigger: CTGGAGCAAATTCGGGAATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCATGGCGCGCATGTGATCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | CTCAGGTTCCTACAGGCCAGGATCACATGCGCGCCATaGAGGGCAAAGGACTTGGCAGTCTCGAACCCTATT | + |
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Preference number: 6 (lower is better) Translates to: LRFLQARITCAP*RAKDLAVSNPI Trigger: AATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCATGGCGCGCATGTGATCCTGGCCTGTAGGAACCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CAA 90 bp | TTCCTACAGGCCAGGATCACATGCGCGCCATGGAGGGCAAAGGACTaGGCAGTCTCGAACCCTATTCCCGAATTTGCTCCAGTAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: FLQARITCAPWRAKD*AVSNPIPEFAPVTR Trigger: CCTGGTTACTGGAGCAAATTCGGGAATAGGGTTCGAGACTGCCAAGTCCTTTGCCCTCCATGGCGCGCATGTGATCCTGGCCTGTAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | GACACATTCTTGGCCTTGAATGCTTCGGCAAAATGCTaGACGCTACGGAGCACGGCCAGGTCCAGGGTCATT | + |
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Preference number: 6 (lower is better) Translates to: DTFLALNASAKC*TLRSTARSRVI Trigger: AATGACCCTGGACCTGGCCGTGCTCCGTAGCGTGCAGCATTTTGCCGAAGCATTCAAGGCCAAGAATGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | CCGAGGGTTAGGATCACAGGTATGCCCGATCATACATaGCTTCATGGACTTGGTGAACGGCCTGGCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: PRVRITGMPDHT*LHGLGERPGQG Trigger: ACCTTGGCCAGGCCGTTCACCAAGTCCATGAAGCCATGTATGATCGGGCATACCTGTGATCCTAACCCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS CAA 72 bp | CATCCATACGGCAAATCTCCTGCGACCCGTTTCCTCTaGCCGGTTTTCGGATGTTCCCACTGGGTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HPYGKSPATRFL*PVFGCSHWVFS Trigger: GGAGAAGACCCAGTGGGAACATCCGAAAACCGGCAAGAGGAAACGGGTCGCAGGAGATTTGCCGTATGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | ATCCATACGGCAAATCTCCTGCGACCCGTTTCCTCTTaGCGGTTTTCGGATGTTCCCACTGGGTCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: IHTANLLRPVSS*RFSDVPTGSSP Trigger: AGGAGAAGACCCAGTGGGAACATCCGAAAACCGGCAAGAGGAAACGGGTCGCAGGAGATTTGCCGTATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | GTCAGTCTCCTGTTCCCATCCATACGGCAAATCTCCTaGGACCCGTTTCCTCTTGCCGGTTTTCGGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: VSLLFPSIRQIS*DPFPLAGFRMF Trigger: GAACATCCGAAAACCGGCAAGAGGAAACGGGTCGCAGGAGATTTGCCGTATGGATGGGAACAGGAGACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CAA 72 bp | GTGACCCCGCGCGGGGAGAGGCGACGGTGCAGTTCATaGGAGAAGAGGATATTGCAGAGTTTAGATCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: VTPRGERRRCSS*EKRILQSLDLL Trigger: TAACAGATCTAAACTCTGCAATATCCTCTTCTCCAATGAACTGCACCGTCGCCTCTCCCCGCGCGGGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CAA 72 bp | CTGGCCAAGGTGAACAGCAGCTTGTACACCCATGAGTaGCGATGGATGGCTGAGTACATCATGTTCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LAKVNSSLYTHE*RWMAEYIMFPG Trigger: CCCTGGGAACATGATGTACTCAGCCATCCATCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTTGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CAA 90 bp | GGCTTCATGGACTTGGTGAACGGCCTGGCCAAGGTGAACAGCAGCTaGTACACCCATGAGTTGCGATGGATGGCTGAGTACATCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: GFMDLVNGLAKVNSS*YTHELRWMAEYIMF Trigger: GAACATGATGTACTCAGCCATCCATCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCCGTTCACCAAGTCCATGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109108.9 |
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| CDS GCA 72 bp | ATCCTTCGTGAGGCCCCAGGGCAGAGCAAACGTCCCTaGATTACACACAAGCACGTGAAGAGACACATTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILREAPGQSKRP*ITHKHVKRHIL Trigger: AAGAATGTGTCTCTTCACGTGCTTGTGTGTAATGCAGGGACGTTTGCTCTGCCCTGGGGCCTCACGAAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CAA 90 bp | TGTTGCATGGACTTGGTGAACGGCCTGGCCAAGGTGAACAGCAGCTaGTACACCCATGAGTTGCGATGGATGGCTGAGTACATCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: CCMDLVNGLAKVNSS*YTHELRWMAEYIMF Trigger: GAACATGATGTACTCAGCCATCCATCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCCGTTCACCAAGTCCATGCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004756.14 |
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| CDS CAA 90 bp | AGAATCATGGACTTGGTGAACGGCCTGGCCAAGGTGAACAGCAGCTaGTACACCCATGAGTTGCGATGGATGGCTGAGTACATCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: RIMDLVNGLAKVNSS*YTHELRWMAEYIMF Trigger: GAACATGATGTACTCAGCCATCCATCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTTGGCCAGGCCGTTCACCAAGTCCATGATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160862.8 |
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| CDS GCA 72 bp | AAAGGACTTGGCAGTCTCGAACCCTATTCCCGAATTTaGTCCAGTAACCAGGACCACCTTGCCTGTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: KGLGSLEPYSRI*SSNQDHLACEV Trigger: GACTTCACAGGCAAGGTGGTCCTGGTTACTGGAGCAAATTCGGGAATAGGGTTCGAGACTGCCAAGTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | AAGGTGAACAGCAGCTTGTACACCCATGAGTTGCGATaGATGGCTGAGTACATCATGTTCCCAGGGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: KVNSSLYTHELR*MAEYIMFPGCT Trigger: AGTGCACCCTGGGAACATGATGTACTCAGCCATCCATCGCAACTCATGGGTGTACAAGCTGCTGTTCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS TCA 72 bp | TACACACAAGCACGTGAAGAGACACATTCTTGGCCTTaGATGCTTCGGCAAAATGCTGCACGCTACGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: YTQAREETHSWP*MLRQNAARYGA Trigger: TGCTCCGTAGCGTGCAGCATTTTGCCGAAGCATTCAAGGCCAAGAATGTGTCTCTTCACGTGCTTGTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004756.14 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS GCA 72 bp | GGTGGTCGGCTTCGTCGGATTATCGTCCACGGTAAATaGCAATCTTGGATCCAAGTAGGTAGTTCTTTTATT | + |
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Preference number: 6 (lower is better) Translates to: GGRLRRIIVHGK*QSWIQVGSSFI Trigger: AATAAAAGAACTACCTACTTGGATCCAAGATTGGCATTTACCGTGGACGATAATCCGACGAAGCCGACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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| CDS CCA 72 bp | CTTCGTCGGATTATCGTCCACGGTAAATGCCAATCTTaGATCCAAGTAGGTAGTTCTTTTATTTATGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LRRIIVHGKCQS*IQVGSSFIYVV Trigger: GACCACATAAATAAAAGAACTACCTACTTGGATCCAAGATTGGCATTTACCGTGGACGATAATCCGACGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004756.14 ENSMUST00000109107.3 ENSMUST00000109108.9 ENSMUST00000160862.8 |
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