Pregenerated sensors for WWC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031563Ensembl transcript IDs: ENSMUST00000057561.9
Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTACCGTGTCACACAGTGGAATGTCCAGCCTGCCTTGGCTCGGTaGCAGGGGCAGGACTGGTGTCTGTGGGCAGTGCCTCCTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LYRVTQWNVQPALAR*QGQDWCLWAVPPGL Trigger: CAGCCCAGGAGGCACTGCCCACAGACACCAGTCCTGCCCCTGCCACCGAGCCAAGGCAGGCTGGACATTCCACTGTGTGACACGGTACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CCA 90 bp | GAGGGTCTGAAGAAGCGGCTGCTCACCCTGGGAGGGACCCTGCTCTaGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: EGLKKRLLTLGGTLL*TSGVMVLVPVSWVA Trigger: GGCCACCCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCCCAGGGTGAGCAGCCGCTTCTTCAGACCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR TCA 90 bp | GACTGGTGTCTGTGGGCAGTGCCTCCTGGGCTGGCTGTCTCCTCTTaGAGGAGACACTGTCAGCTCCGGTGGTTTAGCAGGGGACCACGT | + |
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Preference number: 1 (lower is better) Translates to: DWCLWAVPPGLAVSS*RRHCQLRWFSRGPR Trigger: ACGTGGTCCCCTGCTAAACCACCGGAGCTGACAGTGTCTCCTTCAAGAGGAGACAGCCAGCCCAGGAGGCACTGCCCACAGACACCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CCA 90 bp | TTCTGTGTCTGTACCGTGTCACACAGTGGAATGTCCAGCCTGCCTTaGCTCGGTGGCAGGGGCAGGACTGGTGTCTGTGGGCAGTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: FCVCTVSHSGMSSLP*LGGRGRTGVCGQCL Trigger: GAGGCACTGCCCACAGACACCAGTCCTGCCCCTGCCACCGAGCCAAGGCAGGCTGGACATTCCACTGTGTGACACGGTACAGACACAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CCA 90 bp | AGGTGTTCCAGGTGGGCTCAGAGATGCTCACTTGGATGGAGAGTGTaGCTCTCTAGTTCAAAGGTATGCTGTGGCACCAGTCTCCCGGGC | + |
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Preference number: 1 (lower is better) Translates to: RCSRWAQRCSLGWRV*LSSSKVCCGTSLPG Trigger: GCCCGGGAGACTGGTGCCACAGCATACCTTTGAACTAGAGAGCCACACTCTCCATCCAAGTGAGCATCTCTGAGCCCACCTGGAACACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR GCA 90 bp | GAACGTTCTAATGGGCTTAGTCTTCCGAACGGCAACGCAGGCGGCTaGACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCTGCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: ERSNGLSLPNGNAGG*TSALPAGMGFILPY Trigger: GTAAGGCAGGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGTTCGGAAGACTAAGCCCATTAGAACGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CCA 90 bp | ATGCTGAAGACGGCACCTTCATTTAGTCAACCTCTGCTGCTCAACTaGATCCTGGCCAGGAAGGGTGGACAGCATGGCCTTCCTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: MLKTAPSFSQPLLLN*ILARKGGQHGLPPV Trigger: AACTGGAGGAAGGCCATGCTGTCCACCCTTCCTGGCCAGGATCCAGTTGAGCAGCAGAGGTTGACTAAATGAAGGTGCCGTCTTCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR GCA 90 bp | TCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTaGTTCTCTATTTCTGCCCTCGGCTTTCACACTCTTGTTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SFCPRPQLSTAGVHL*FSISALGFHTLVFS Trigger: GGAGAAAACAAGAGTGTGAAAGCCGAGGGCAGAAATAGAGAAGCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR TCA 90 bp | GTAGGCTCCCACTTTAATCACCCCTACTGCCTGCTTCTGACTTTCTaGAATGCATACTTCCCTCCTGTGGCTGTTATCCGCCTCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: VGSHFNHPYCLLLTF*NAYFPPVAVIRLRH Trigger: GTGTCTGAGGCGGATAACAGCCACAGGAGGGAAGTATGCATTTCAGAAAGTCAGAAGCAGGCAGTAGGGGTGATTAAAGTGGGAGCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR TCA 90 bp | CTCCTGTGGCTGTTATCCGCCTCAGACACAAGTTCTTTCTACCACTaGGTAAAGCACTTTTGCTTTCTATATGGAGGCCAAGTGGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LLWLLSASDTSSFYH*VKHFCFLYGGQVGE Trigger: CTCACCCACTTGGCCTCCATATAGAAAGCAAAAGTGCTTTACTCAGTGGTAGAAAGAACTTGTGTCTGAGGCGGATAACAGCCACAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR GCA 90 bp | ACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCTTCTCTATTTCTaGCCTCGGCTTTCACACTCTTGTTTTCTCCAGACAAGTTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: TAAFYSRSTPLLLYF*PRLSHSCFLQTSLR Trigger: TCTTAAACTTGTCTGGAGAAAACAAGAGTGTGAAAGCCGAGGGCAGAAATAGAGAAGCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR GCA 90 bp | TGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATACACACAATaGAAAACTATGTCTGAGCTCCTCAAGAGAGAAGTGTCACACTTT | + |
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Preference number: 1 (lower is better) Translates to: WTQTIDLANVLLYTQ*KTMSELLKREVSHF Trigger: AAAGTGTGACACTTCTCTCTTGAGGAGCTCAGACATAGTTTTGCATTGTGTGTATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR TCA 90 bp | AGGGATACAGTCTTAACAAGAATTATTCACAACAAATTTCTGGCTTaGGGAATTCTTTGTGGAATTGCTCGATACATGGTTCAAGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: RDTVLTRIIHNKFLA*GILCGIARYMVQVD Trigger: ATCTACTTGAACCATGTATCGAGCAATTCCACAAAGAATTCCTCAAGCCAGAAATTTGTTGTGAATAATTCTTGTTAAGACTGTATCCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CCA 90 bp | GTATGTAATTTGTATGCTACAGAGACTCAGCTAAACTTTGTTATTTaGCAAGTTAATATCCTCCTTGTACCTGTAACACTTGAGTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: VCNLYATETQLNFVI*QVNILLVPVTLESD Trigger: ATCAGACTCAAGTGTTACAGGTACAAGGAGGATATTAACTTGCCAAATAACAAAGTTTAGCTGAGTCTCTGTAGCATACAAATTACATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCGCAACGGGCTGGGGCTaGTGGGCTTGCTGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TATQAAALLLSLLGWVLSATGWG*WACWPL Trigger: CAGAGGCCAGCAAGCCCAGCAGCCCCAGCCCGTTGC...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGGTGTGTGCTTCACTGTaGAGCCTGCTGGAGCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWVCASL*SLLEPG Trigger: GCCGGGCTCCAGCAGGCTGCACAGTGAAGCACACAC...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCCTGGCCAGGAAGGGTaGACAGCATGGCCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWPGQEG*TAWPSS Trigger: GGAGGAAGGCCATGCTGTCCACCCTTCCTGGCCAGG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCGGAGGGACCCTGCTCTaGACCTCGGGAGTCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: TATQAAALLLSLLGWVLSGGTLL*TSGVMV Trigger: CACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCCACAGTTTTCTTTCTaGCCCCGACCGCAGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWPQFSF*PRPQLS Trigger: AGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTGTGG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGTGGCAAGTGAGCAGCTaGGAGGCGGTGCTAAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: FYIRHTHPCLGLSRAISGWQVSS*EAVLSH Trigger: GTGGCTTAGCACCGCCTCTCAGCTGCTCACTTGCCA...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGAGCAGCATCTGGAGCTaGAGCAAGCCAATCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWSSIWS*SKPIQK Trigger: TTTCTGGATTGGCTTGCTTCAGCTCCAGATGCTGCT...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGTCTAGTTCAAAGGTATaGTGTGGCACCAGTCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWSSSKV*CGTSLP Trigger: CGGGAGACTGGTGCCACAGCATACCTTTGAACTAGA...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCTCTGGGATGAGACCATaGCTGAGATTGTGCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: TATQAAALLLSLLGWVLSSGMRP*LRLCPG Trigger: ACCTGGGCACAATCTCAGGCATGGTCTCATCCCAGA...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCCAGTCCACACCCTTTaGTTCTGCATTCAACTACCT | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWPVHTL*FCIQLP Trigger: AGGTAGTTGAATGCAGAAGCAAAGGGTGTGGACTGG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCATTTAGTCAACCTCTaGTGCTCAACTGGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWHLVNL*CSTGSW Trigger: CCAGGATCCAGTTGAGCAGCAGAGGTTGACTAAATG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGTGCTCAACTGGATCCTaGCCAGGAAGGGTGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: FYIRHTHPCLGLSRAISGCSTGS*PGRVDS Trigger: GCTGTCCACCCTTCCTGGCCAGGATCCAGTTGAGCA...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCCTCTGCTGCTCAACTaGATCCTGGCCAGGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FYIRHTHPCLGLSRAISGPLLLN*ILARKG Trigger: ACCCTTCCTGGCCAGGATCCAGTTGAGCAGCAGAGG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CAA 90 bp | GGAAGGAACCGGGCAGGTGTTCCAGGTGGGCTCAGAGATGCTCACTaGGATGGAGAGTGTGGCTCTCTAGTTCAAAGGTATGCTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GRNRAGVPGGLRDAH*DGECGSLVQRYAVA Trigger: TGCCACAGCATACCTTTGAACTAGAGAGCCACACTCTCCATCCAAGTGAGCATCTCTGAGCCCACCTGGAACACCTGCCCGGTTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGAGGTGGGCTCAGAGATaGTCACTTGGATGGAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: FYIRHTHPCLGLSRAISGRWAQR*SLGWRV Trigger: CACTCTCCATCCAAGTGAGCATCTCTGAGCCCACCT...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCCTCCCTTGGCAAGTaGGCAGCTGAGAGGCGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GLYKHNMTADFQSGERILPSLGK*AAERRC Trigger: GCACCGCCTCTCAGCTGCTCACTTGCCAAGGGAGGG...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCCTTTTATGCATCCCTaGCAGAATCTCCCGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: FYIRHTHPCLGLSRAISGPFMHP*QNLPDR Trigger: TCTGTCCGGGAGATTCTGTCAGGGATGCATAAAAGG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGATGTTTAGGGGGAAATaGTTACATTTTAGGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWMFRGK*LHFRCS Trigger: ACTGCACCTAAAATGTAATCATTTCCCCCTAAACAT...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTAGTGCCCCCTCTGCACTaGCTGCAGCGTCATCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GLYKHNMTADFQSGERILVPPLH*LQRHQR Trigger: CCTCTGATGACGCTGCAGGCAGTGCAGAGGGGGCAC...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCTTGGATGGAGAGTGTaGCTCTCTAGTTCAAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: FYIRHTHPCLGLSRAISGLGWRV*LSSSKV Trigger: TACCTTTGAACTAGAGAGCCACACTCTCCATCCAAG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATACACTGTGCAGCCTGCTaGAGCCCGGCTCCTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIHCAAC*SPAPAA Trigger: GGCTGCAGGAGCCGGGCTCCAGCAGGCTGCACAGTG...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCACTGTACAACACTTGTaGACCAGATTTGGACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCTVQHL*TRFGPD Trigger: ATCTGGTCCAAATCTGGTCCACAAGTGTTGTACAGT...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAGCTGGCCTCTGGCTGTaGCCTGGACTGCTTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIAGLWL*PGLLEA Trigger: AGCCTCAAGCAGTCCAGGCCACAGCCAGAGGCCAGC...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGAAGATAGATATAAAATaGTCCAGTCCACACCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: FYIRHTHPCLGLSRAISGKIDIK*SSPHPL Trigger: CAAAGGGTGTGGACTGGATCATTTTATATCTATCTT...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATACCTCAGTCACAGCTCTaGGCTACCAGCCTGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIPQSQL*ATSLRH Trigger: GTGTCTCAGGCTGGTAGCTCAGAGCTGTGACTGAGG...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAGGCCAGGCAAGCATCTaGAGTCTTCTCAGGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DRISRKMTATKYFLVSVEGQASI*SLLRGF Trigger: AAAACCCCTGAGAAGACTGCAGATGCTTGCCTGGCC...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAATCAGAGATGCTCACTTaGATGGAGAGTGTGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: YKHNMTADFQSGERILPESEMLT*MESVAL Trigger: GAGAGCCACACTCTCCATCCAAGTGAGCATCTCTGA...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAACTGCTTCTCTATTTCTaGCCTCGGCTTTCACACTCT | + |
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Preference number: 2 (lower is better) Translates to: YKHNMTADFQSGERILPELLLYF*PRLSHS Trigger: AGAGTGTGAAAGCCGAGGGCAGAAATAGAGAAGCAG...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR GCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAGCAGGAGTACACCTCTaGTTCTCTATTTCTGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: DRISRKMTATKYFLVSVEAGVHL*FSISAL Trigger: GAGGGCAGAAATAGAGAAGCAGAGGTGTACTCCTGC...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATACTCTCCCTGCTGGGATaGGTTTTATCCTGCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: LKPFNMDSNNRSGKRPPILSLLG*VLSCLT Trigger: TGTAAGGCAGGATAAAACCCATCCCAGCAGGGAGAG...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR TCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAAAAGAACACGGCTCTTTaGCCAATTTCTAGGTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: YKHNMTADFQSGERILPEKNTAL*PISRSS Trigger: GCTTGACCTAGAAATTGGTCAAAGAGCCGTGTTCTT...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATACAACAGGAGTTAATATaGGCGATGTATTTACACACC | + |
|
Preference number: 2 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIQQELI*AMYLHT Trigger: GGTGTGTAAATACATCGCCCATATTAACTCCTGTTG...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR GCA 72 bp | ATGCTGTGGCACCAGTCTCCCGGGCAGCTAGACAGCTaGCTGCTGCAGTCGGCTCAGCGGGCAGACACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: MLWHQSPGQLDS*LLQSAQRADTG Trigger: CCCGGTGTCTGCCCGCTGAGCCGACTGCAGCAGGCAGCTGTCTAGCTGCCCGGGAGACTGGTGCCACAGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | GTCGGCTCAGCGGGCAGACACCGGGCACATGTTACCTaGGTCCAGCCTGCAGCGAAGCCCAGCGGTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: VGSAGRHRAHVT*VQPAAKPSGNT Trigger: TGTGTTACCGCTGGGCTTCGCTGCAGGCTGGACTCAGGTAACATGTGCCCGGTGTCTGCCCGCTGAGCCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR GCA 72 bp | TCTCCTCTAATGGATAGAGGCGTGCCCCCTCTGCACTaGCTGCAGCGTCATCAGAGGCCGGGGCCACCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPLMDRGVPPLH*LQRHQRPGPPC Trigger: GCAAGGTGGCCCCGGCCTCTGATGACGCTGCAGGCAGTGCAGAGGGGGCACGCCTCTATCCATTAGAGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | GTCACACAGTGGAATGTCCAGCCTGCCTTGGCTCGGTaGCAGGGGCAGGACTGGTGTCTGTGGGCAGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VTQWNVQPALAR*QGQDWCLWAVP Trigger: AGGCACTGCCCACAGACACCAGTCCTGCCCCTGCCACCGAGCCAAGGCAGGCTGGACATTCCACTGTGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGTGTTCCTGGGCTGGTTaGCTGGCTTCTGCCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWCSWAG*LASAWC Trigger: GCACCAGGCAGAAGCCAGCAAACCAGCCCAGGAACA...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | TGTACCGTGTCACACAGTGGAATGTCCAGCCTGCCTTaGCTCGGTGGCAGGGGCAGGACTGGTGTCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CTVSHSGMSSLP*LGGRGRTGVCG Trigger: CCCACAGACACCAGTCCTGCCCCTGCCACCGAGCCAAGGCAGGCTGGACATTCCACTGTGTGACACGGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | CTGTGGGCAGTGCCTCCTGGGCTGGCTGTCTCCTCTTaGAGGAGACACTGTCAGCTCCGGTGGTTTAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LWAVPPGLAVSS*RRHCQLRWFSR Trigger: CCTGCTAAACCACCGGAGCTGACAGTGTCTCCTTCAAGAGGAGACAGCCAGCCCAGGAGGCACTGCCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | ACCTCTGCTGCTCAACTGGATCCTGGCCAGGAAGGGTaGACAGCATGGCCTTCCTCCAGTTACCTACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSAAQLDPGQEG*TAWPSSSYLQG Trigger: GCCCTGTAGGTAACTGGAGGAAGGCCATGCTGTCCACCCTTCCTGGCCAGGATCCAGTTGAGCAGCAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGGTCTTTGCCCCTCCCTaGGCAAGTGAGCAGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FYIRHTHPCLGLSRAISGVFAPP*ASEQLR Trigger: TCTCAGCTGCTCACTTGCCAAGGGAGGGGCAAAGAC...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | ATAAAAGCCCTTCTGTGTCTGTACCGTGTCACACAGTaGAATGTCCAGCCTGCCTTGGCTCGGTGGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IKALLCLYRVTQ*NVQPALARWQG Trigger: CCCCTGCCACCGAGCCAAGGCAGGCTGGACATTCCACTGTGTGACACGGTACAGACACAGAAGGGCTTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCACGTACCGCCAGTCCTaGTTTTCCTTGAGCAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: TATQAAALLLSLLGWVLSTYRQS*FSLSNE Trigger: TTCATTGCTCAAGGAAAACAAGGACTGGCGGTACGT...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | AAAGGGTTTTGCAGAGAAAAGGTGGTCAGACGTGGGTaGTGGAAGGAACCGGGCAGGTGTTCCAGGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGFCREKVVRRG*WKEPGRCSRWA Trigger: AGCCCACCTGGAACACCTGCCCGGTTCCTTCCATCACCCACGTCTGACCACCTTTTCTCTGCAAAACCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR GCA 72 bp | GCAGACTGTGATAGAAGCAGTGGCCAGGCAAGCATCTaGAGTCTTCTCAGGGGTTTTGAAAGCTGCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ADCDRSSGQASI*SLLRGFESCLP Trigger: GGGGAGGCAGCTTTCAAAACCCCTGAGAAGACTGCAGATGCTTGCCTGGCCACTGCTTCTATCACAGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | ACGGCACCTTCATTTAGTCAACCTCTGCTGCTCAACTaGATCCTGGCCAGGAAGGGTGGACAGCATGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TAPSFSQPLLLN*ILARKGGQHGL Trigger: AAGGCCATGCTGTCCACCCTTCCTGGCCAGGATCCAGTTGAGCAGCAGAGGTTGACTAAATGAAGGTGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | ACTTTCTTACAGCTAAGCGTGGGGCAGGAGTCGGGCTaGCTCAGCCTCCCAGAACGTTCTAATGGGCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TFLQLSVGQESG*LSLPERSNGLS Trigger: ACTAAGCCCATTAGAACGTTCTGGGAGGCTGAGCCAGCCCGACTCCTGCCCCACGCTTAGCTGTAAGAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCTGAGCACTTCTGTATaGAGAGCAATCATTTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWLSTSV*RAIIWE Trigger: TTCCCAAATGATTGCTCTCAATACAGAAGTGCTCAG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR GCA 72 bp | CCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTaGTTCTCTATTTCTGCCCTCGGCTTTCACACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRPQLSTAGVHL*FSISALGFHTL Trigger: AAGAGTGTGAAAGCCGAGGGCAGAAATAGAGAAGCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | AAGAGGGCAGAAAGAAAGGGTTTTGCAGAGAAAAGGTaGTCAGACGTGGGTGATGGAAGGAACCGGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KRAERKGFAEKR*SDVGDGRNRAG Trigger: ACCTGCCCGGTTCCTTCCATCACCCACGTCTGACCACCTTTTCTCTGCAAAACCCTTTCTTTCTGCCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | AAGAACCTTAACTTGGAGCTGAACGAGATGGAGAACTaGACCATGGGGCTCTGGAAATCCTGCGTCATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KNLNLELNEMEN*TMGLWKSCVIQ Trigger: CTGGATGACGCAGGATTTCCAGAGCCCCATGGTCCAGTTCTCCATCTCGTTCAGCTCCAAGTTAAGGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGGGTTCAAGTAGATTCTaGTATTTGTGCCAATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FYIRHTHPCLGLSRAISGGSSRF*YLCQSG Trigger: CCCTGATTGGCACAAATACAAGAATCTACTTGAACC...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAAATGTCCAGCCTGCCTaGGCTCGGTGGCAGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LKPFNMDSNNRSGKRPPINVQPA*ARWQGQ Trigger: CTGCCCCTGCCACCGAGCCAAGGCAGGCTGGACATT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | CACTTTAATCACCCCTACTGCCTGCTTCTGACTTTCTaGAATGCATACTTCCCTCCTGTGGCTGTTATCCGC | + |
|
Preference number: 3 (lower is better) Translates to: HFNHPYCLLLTF*NAYFPPVAVIR Trigger: GCGGATAACAGCCACAGGAGGGAAGTATGCATTTCAGAAAGTCAGAAGCAGGCAGTAGGGGTGATTAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAGTCTTCTCAGGGGTTTaGAAAGCTGCCTCCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DRISRKMTATKYFLVSVEVFSGV*KAASPP Trigger: GGGAGGGGAGGCAGCTTTCAAAACCCCTGAGAAGAC...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | AAACCTGGTAACAAACTCTCTTCTGTTTGGCAAGTTTaGTCTCATTATGATGCGCCCCGACCTCAGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KPGNKLSSVWQV*SHYDAPRPQLS Trigger: GGAGAGCTGAGGTCGGGGCGCATCATAATGAGATCAAACTTGCCAAACAGAAGAGAGTTTGTTACCAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR GCA 72 bp | TTCTACAGCAGGAGTACACCTCTGCTTCTCTATTTCTaGCCTCGGCTTTCACACTCTTGTTTTCTCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: FYSRSTPLLLYF*PRLSHSCFLQT Trigger: TGTCTGGAGAAAACAAGAGTGTGAAAGCCGAGGGCAGAAATAGAGAAGCAGAGGTGTACTCCTGCTGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | GATGAAACTGGTATGAAACGGAAGCTCTTCAAGAGTTaGGTTATATTACAGGAAACACAAGCCCCGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DETGMKRKLFKS*VILQETQAPPP Trigger: TGGGGGCGGGGCTTGTGTTTCCTGTAATATAACTCAACTCTTGAAGAGCTTCCGTTTCATACCAGTTTCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | ACAGACCTACAGAAAGCGGCCTGTATAAGCACAACATaGCTGCTGACTTTCAGAGTGGAGAAAGGATTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TDLQKAACISTT*LLTFRVEKGFY Trigger: GTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCCGCTTTCTGTAGGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR GCA 72 bp | TCCACACCCTTTGCTTCTGCATTCAACTACCTTTTATaGATCCCTGACAGAATCTCCCGGACAGAATCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: STPFASAFNYLL*IPDRISRTESL Trigger: TAGAGATTCTGTCCGGGAGATTCTGTCAGGGATGCATAAAAGGTAGTTGAATGCAGAAGCAAAGGGTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAAGTAAATATTCAGTCTTaGCCCCTCCCTTGGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YKHNMTADFQSGERILPEVNIQS*PLPWQV Trigger: CACTTGCCAAGGGAGGGGCAAAGACTGAATATTTAC...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTATCGGCTTTCACACTCTaGTTTTCTCCAGACAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GLYKHNMTADFQSGERILSAFTL*FSPDKF Trigger: AAACTTGTCTGGAGAAAACAAGAGTGTGAAAGCCGA...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | GGTAAGTTAAAACCCAGCTTGAAGAACACGGCTCTTTaGCCAATTTCTAGGTCAAGCTTGCTTGTTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: GKLKPSLKNTAL*PISRSSLLVHP Trigger: TGGATGAACAAGCAAGCTTGACCTAGAAATTGGTCAAAGAGCCGTGTTCTTCAAGCTGGGTTTTAACTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | GACCACGTACCGCCAGTCCTTGTTTTCCTTGAGCAATaGAAACATCCTATCTCATTTAGGGATACAGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: DHVPPVLVFLEQ*KHPISFRDTVL Trigger: TAAGACTGTATCCCTAAATGAGATAGGATGTTTTCATTGCTCAAGGAAAACAAGGACTGGCGGTACGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | TTGGGAAACAGATCACATGCTTTTCGGTGTCTAAGATaGCTTAGGAAGCTAAGGTCTCAGTGGATAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGNRSHAFRCLR*LRKLRSQWIVR Trigger: TCTCACTATCCACTGAGACCTTAGCTTCCTAAGTCATCTTAGACACCGAAAAGCATGTGATCTGTTTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | CTGTTATCCGCCTCAGACACAAGTTCTTTCTACCACTaGGTAAAGCACTTTTGCTTTCTATATGGAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLSASDTSSFYH*VKHFCFLYGGQ Trigger: TTGGCCTCCATATAGAAAGCAAAAGTGCTTTACTCAGTGGTAGAAAGAACTTGTGTCTGAGGCGGATAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATATGGAAGAACCTTAACTaGGAGCTGAACGAGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIWKNLN*ELNEME Trigger: CTCCATCTCGTTCAGCTCCAAGTTAAGGTTCTTCCA...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR TCA 72 bp | CAAGCTTGCTTGTTCATCCAGAAGATAGATATAAAATaGTCCAGTCCACACCCTTTGCTTCTGCATTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: QACLFIQKIDIK*SSPHPLLLHST Trigger: AGTTGAATGCAGAAGCAAAGGGTGTGGACTGGATCATTTTATATCTATCTTCTGGATGAACAAGCAAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAATTTCTAGGTCAAGCTaGCTTGTTCATCCAGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIISRSS*LVHPED Trigger: ATCTTCTGGATGAACAAGCAAGCTTGACCTAGAAAT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAATTGAGAGCAATCATTaGGGAAACAGATCACATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIIESNH*GNRSHA Trigger: AGCATGTGATCTGTTTCCCAAATGATTGCTCTCAAT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAGAAGCTCTTCAAGAGTaGAGTTATATTACAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: DRISRKMTATKYFLVSVEEALQE*SYITGN Trigger: GTTTCCTGTAATATAACTCAACTCTTGAAGAGCTTC...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAACAAACTCTCTTCTGTTaGGCAAGTTTGATCTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: DRISRKMTATKYFLVSVEQTLFC*ASLISL Trigger: TAATGAGATCAAACTTGCCAAACAGAAGAGAGTTTG...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR GCA 72 bp | CAACAAATTTCTGGCTTGAGGAATTCTTTGTGGAATTaGTCGATACATGGTTCAAGTAGATTCTTGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: QQISGLRNSLWN*SIHGSSRFLYL Trigger: CAAATACAAGAATCTACTTGAACCATGTATCGAGCAATTCCACAAAGAATTCCTCAAGCCAGAAATTTGTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| 3UTR CCA 72 bp | TATTCACAACAAATTTCTGGCTTGAGGAATTCTTTGTaGAATTGCTCGATACATGGTTCAAGTAGATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: YSQQISGLRNSL*NCSIHGSSRFL Trigger: CAAGAATCTACTTGAACCATGTATCGAGCAATTCCACAAAGAATTCCTCAAGCCAGAAATTTGTTGTGAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCCACAGAGCCCACTCTaGCCGGGCTGGCTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWPQSPL*PGWLGD Trigger: GTCCCCCAGCCAGCCCGGCCAGAGTGGGCTCTGTGG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCCTCTGTGCAGCGGCTaGCCTCTGCCAAGGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWPLCSG*PLPREP Trigger: GGGTTCCCTTGGCAGAGGGCAGCCGCTGCACAGAGG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR TCA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCTCGAGCATGGGCTGCTaGGACCGAGCTCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TATQAAALLLSLLGWVLSSSMGC*DRAPGS Trigger: GGAGCCTGGAGCTCGGTCTCAGCAGCCCATGCTCGA...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR GCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCGGGGTAGCGGCAGCTaGCCGCTCCCGGCCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGRGSGS*PLPALL Trigger: TAGGAGGGCCGGGAGCGGGCAGCTGCCGCTACCCCG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGGGGTTGTGTGGCTGCTaGCTGTCACTCCCACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWGLCGC*LSLPPH Trigger: GTGGGGTGGGAGTGACAGCCAGCAGCCACACAACCC...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCCCACTCTGGCCGGGCTaGCTGGGGGACTTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCPLWPG*LGDLTT Trigger: GGTGGTCAAGTCCCCCAGCCAGCCCGGCCAGAGTGG...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR CCA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCGTCAGTGGGGTTGTGTaGCTGCTGGCTGTCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TATQAAALLLSLLGWVLSVSGVV*LLAVTP Trigger: GGGAGTGACAGCCAGCAGCCACACAACCCCACTGAC...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGTGCCGAGGCTCCTTCTaGCTCTGCTCCCGCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGCRGSF*LCSRSR Trigger: CCGACTGCGGGAGCAGAGCCAGAAGGAGCCTCGGCA...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGGTGGGGTTGTGTGGCTaGTGGCTGTCACTCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGVGLCG*WLSLPP Trigger: GGGTGGGAGTGACAGCCAGCAGCCACACAACCCCAC...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGGGCTCCTTCTGGCTCTaGTCCCGCAGTCGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGGSFWL*SRSRHT Trigger: TGTGTGCCGACTGCGGGAGCAGAGCCAGAAGGAGCC...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCTCAGAGAGCCCCGACTaGAGGCCAGGGACCCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCSESPD*RPGTLD Trigger: GTCTAGGGTCCCTGGCCTCCAGTCGGGGCTCTCTGA...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCACTGAGGGAGTTGAGTaGCCCCCTGCTGGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCTEGVE*PPAGGV Trigger: AACACCTCCAGCAGGGGGTCACTCAACTCCCTCAGT...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCAACCTGCAGATGTACTaGCTTCGCTCGCCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCNLQMY*LRSPGE Trigger: CTCCCCAGGCGAGCGAAGTCAGTACATCTGCAGGTT...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCTTCTCCCTGAAGGACTaGACCTGCCGAGGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCFSLKD*TCRGSF Trigger: GAAGGAGCCTCGGCAGGTGCAGTCCTTCAGGGAGAA...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCAGGAGAGAGAGGACCTaGAGGACAGGGATGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCRRERT*RTGMPL Trigger: CAGTGGCATCCCTGTCCTCCAGGTCCTCTCTCTCCT...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGTCTGTGTGGTTTTGTTaGTGTGGTCGATGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWSVWFC*CGRCSR Trigger: CCTACTACATCGACCACATCAACAAAACCACACAGA...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGGTCGGCACACATCCTTaGAGACCTGCCTCATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGVGTHP*RPASST Trigger: GGTTGATGAGGCAGGTCTCCAAGGATGTGTGCCGAC...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGGCTGGTATGAGAGCTTaGTTTTTCTTTGTAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWAGMRA*FFFVGI Trigger: GATGCCTACAAAGAAAAATCAAGCTCTCATACCAGC...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGAGAAATGCTTGTCTGTaGCCCAGCGTCAAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGRNACL*PSVKGL Trigger: CAGACCCTTGACGCTGGGTCACAGACAAGCATTTCT...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGTTTCGTGGATGGTGGTaGTGGGTCCGGAAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGFRGWW*WVRKEC Trigger: ACATTCCTTCCGGACCCATCACCACCATCCACGAAA...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCCGATGTAGAAAACCTTaGCGTCGTAGTCCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCRCRKP*RRSPWP Trigger: AGGCCAGGGACTACGACGGCAAGGTTTTCTACATCG...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCTCCAGCTGGTCCTCCTaGTGTTGTGGTCGATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCSSWSS*CCGRCR Trigger: TCTACATCGACCACAACACCAGGAGGACCAGCTGGA...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGAGTTCTTGCTTCATGTaGGAGAGTTCTCTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWSSCFM*ESSLFS Trigger: GCTGAAAAGAGAACTCTCCCACATGAAGCAAGAACT...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGTTGGCTTCTTCATACTaGAGACTCAGTCTGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWLASSY*RLSLTF Trigger: AAAGGTCAGACTGAGTCTCCAGTATGAAGAAGCCAA...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGAGTCCTATCTGCACCTaGGCAGTCTCCACAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGSPICT*AVSTMV Trigger: CACCATTGTGGAGACTGCCCAGGTGCAGATAGGACT...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CAA 72 bp | CGGGCAGGTGTTCCAGGTGGGCTCAGAGATGCTCACTaGGATGGAGAGTGTGGCTCTCTAGTTCAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RAGVPGGLRDAH*DGECGSLVQRY Trigger: ATACCTTTGAACTAGAGAGCCACACTCTCCATCCAAGTGAGCATCTCTGAGCCCACCTGGAACACCTGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCTGGAGGAGAGGCTTTaGAGTTGCGAGTACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGLEERL*SCEYKE Trigger: TTCCTTGTACTCGCAACTTCAAAGCCTCTCCTCCAG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCTGAGCAGTCCTCCTaGGGGTGGGCTGGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILPEQSS*GWAGKP Trigger: CGGTTTGCCAGCCCACCCTCAGGAGGACTGCTCAGG...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACGCACGGGGCATTCCTaGGCAGTCCTCCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILRTGHS*AVLLRV Trigger: CACCCTCAGGAGGACTGCTCAGGAATGCCCCGTGCG...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCTATCTGAGTCCTATCTaGACCTGGGCAGTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCYLSPI*TWAVST Trigger: TGTGGAGACTGCCCAGGTGCAGATAGGACTCAGATA...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGCTCACCATCCAACTTTaGCAGTTCAATTTTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWLTIQL*QFNFQV Trigger: AACTTGAAAATTGAACTGTCAAAGTTGGATGGTGAG...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTATCCGCCAGGCTGATCTaGGTCCCAGCCAGGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILSARLI*VPARHS Trigger: GGAATGCCTGGCTGGGACGCAGATCAGCCTGGCGGA...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGTTCGTCTGTTCAGCCTaGTTCTCTGCTTGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGFVCSA*FSACFR Trigger: TCTGAAGCAAGCAGAGAAGCAGGCTGAACAGACGAA...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGACATGGACAGTGTGCTaGAGGAGAGGCTTTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGTWTVC*RRGFEV Trigger: AACTTCAAAGCCTCTCCTCCAGCACACTGTCCATGT...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCCTGGACAGAGAGAGATaGGAATTCACAGGACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCLDRER*EFTGLD Trigger: ATCTAGTCCTGTGAATTCTCATCTCTCTCTGTCCAG...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCAATATCTCCAGAAATaGTTGTCTGTGACCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGQYLQK*LSVTQR Trigger: ACGCTGGGTCACAGACAAGCATTTCTGGAGATATTG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCAGCTGTCACTGTCACTaGGATTTAACCTGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCSCHCH*DLTCRC Trigger: ACATCTGCAGGTTAAATCGCAGTGACAGTGACAGCT...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACTGAAGGACTGCACCTaGCGAGGCTCCTTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILLKDCT*RGSFWL Trigger: GAGCCAGAAGGAGCCTCGGCAGGTGCAGTCCTTCAG...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTAAGGCAATCTTCTCCCTaGAGGACTGCACCTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILRQSSP*RTAPAE Trigger: CTCGGCAGGTGCAGTCCTTCAGGGAGAAGATTGCCT...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAGCAGCGGCTGCCCTCTaGCAAGGGAACCCCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIAAAAL*QGNPRL Trigger: GAGTCTGGGGTTCCCTTGGCAGAGGGCAGCCGCTGC...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAAAGTCCAGATGGCAGCTaGCCAGGGTCTTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKHNMTADFQSGERILPESPDGS*PGSSAG Trigger: GCCTGCTGAAGACCCTGGTCAGCTGCCATCTGGACT...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAACTTCTGCGTCCTGAGTaGGTCCTGGGCCACGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVELLRPE*VLGHGE Trigger: CTCTCCGTGGCCCAGGACGCACTCAGGACGCAGAAG...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCAGCTAAATTTGATCTaGTTCGAACCCCAATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGQLNLI*FEPQYL Trigger: GAGATATTGGGGTTCGAAGCAGATCAAATTTAGCTG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAAGCTCTTCCTCCAGGTaGTGGCGCTCGGCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPISSSSR*WRSASR Trigger: CCTGGAAGCCGAGCGCCAGCACCTGGAGGAAGAGCT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGTGCAAGGCATTTGCTTaGAAGGAAGCAAATTATACC | + |
|
Preference number: 4 (lower is better) Translates to: FYIRHTHPCLGLSRAISGCKAFA*KEANYT Trigger: GGTATAATTTGCTTCCTTCCAAGCAAATGCCTTGCA...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAATCATTGAGGCGACTCTaGCGGGTCAGCGAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVESLRRL*RVSEAC Trigger: GCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGA...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTATGGGGAGAAGGTTTGTaGGCGCACTATCACGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILWGEGL*AHYHAV Trigger: AACAGCGTGATAGTGCGCTCACAAACCTTCTCCCCA...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAACTTCTGTTGAAGGGCTaGCTGGGAAACGGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKHNMTADFQSGERILPELLLKG*LGNGHP Trigger: AGGGTGGCCGTTTCCCAGGCAGCCCTTCAACAGAAG...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAACCAGGTCCAGAGAAGTaGGCACGGGGCATTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVEPGPEK*ARGIPE Trigger: CTCAGGAATGCCCCGTGCGCACTTCTCTGGACCTGG...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAAAAGCCTCTCAGGGCCTaGAGCTCGTCATTGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YKHNMTADFQSGERILPEKPLRA*SSSLRR Trigger: TCGCCTCAATGACGAGCTGCAGGCCCTGAGAGGCTT...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTAGAATCCAGCAAGGCCTaGTTTTCACCAAGGCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILESSKA*FSPRPT Trigger: CGTTGGCCTTGGTGAAAACCAGGCCTTGCTGGATTC...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAAGGCTCCTTCCTACACTaGCTTGTCTCAGGCCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YKHNMTADFQSGERILPEGSFLH*LVSGPL Trigger: TAGGGGGCCTGAGACAAGCCAGTGTAGGAAGGAGCC...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACAGTCTCCACAATGGTaGCATCCTCTTCACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILQSPQW*HPLHCR Trigger: CCTACAGTGAAGAGGATGTCACCATTGTGGAGACTG...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAACTCAACGTCTTCTGTTaGAGGGCTGCCTGGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: YKHNMTADFQSGERILPELNVFC*RAAWET Trigger: CGTTTCCCAGGCAGCCCTTCAACAGAAGACGTTGAG...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAACGGAGAGATAGTCCTTaGGCATCTTCTCCTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVERRDSP*ASSPAR Trigger: GCGAGCAGGAGAAGATGCTCAAGGACTATCTCTCCG...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAATTGAGCATCTTCTCCTaGTCGCCCCGCCACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVELSIFS*SPRHCF Trigger: GAAACAGTGGCGGGGCGAGCAGGAGAAGATGCTCAA...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTAATGACATGGACAGTGTaGTGGAGGAGAGGCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILMTWTV*WRRGFE Trigger: TTCAAAGCCTCTCCTCCAGCACACTGTCCATGTCAT...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAACCTTATCGACCAGGGTaGGAAGTCCAGATGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVEPYRPG*EVQMAA Trigger: AGCTGCCATCTGGACTTCCCACCCTGGTCGATAAGG...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATATTCGAAACAGACAGCTaGCATCCGCAGAGGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIFETDS*HPQRRE Trigger: TTCCCTCCTCTGCGGATGTCAGCTGTCTGTTTCGAA...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAACATCCTTGGAGACCTaGCTCATCAACCTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVETSLET*LINLSA Trigger: CGCAGAGAGGTTGATGAGGCAGGTCTCCAAGGATGT...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATACTCTGTTCCTTCACGTaGTACAGCTCCTTCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPILCSFT*YSSFCV Trigger: GACGCAGAAGGAGCTGTACCACGTGAAGGAACAGAG...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAATGTGGAGAGGTGTCATaGGAGGACCCTGGAAATACG | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVECGEVS*EDPGNT Trigger: CGTATTTCCAGGGTCCTCCCATGACACCTCTCCACA...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CAA 72 bp | TCTGCTTCTCTATTTCTGCCCTCGGCTTTCACACTCTaGTTTTCTCCAGACAAGTTTAAGAGGGCAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SASLFLPSAFTL*FSPDKFKRAER Trigger: TCTTTCTGCCCTCTTAAACTTGTCTGGAGAAAACAAGAGTGTGAAAGCCGAGGGCAGAAATAGAGAAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CAA 72 bp | TGCTTTCTATATGGAGGCCAAGTGGGTGAGGACCTATaGATGGAATCTGTCTTTACTGTGCATAAACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLYGGQVGEDL*MESVFTVHKLG Trigger: GCCTAGTTTATGCACAGTAAAGACAGATTCCATCAATAGGTCCTCACCCACTTGGCCTCCATATAGAAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTATTCAAGTCTTGCTTCTaGTCCTCTTTCGTCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILFKSCF*SSFVCS Trigger: TGAACAGACGAAAGAGGAGCAGAAGCAAGACTTGAA...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAATCTGCGTTCAAGTCTTaGTTCTGCTCCTCTTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKHNMTADFQSGERILPESAFKS*FCSSFV Trigger: GACGAAAGAGGAGCAGAAGCAAGACTTGAACGCAGA...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAACCTCATCAACCTCTCTaGGTTCAAGTCTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKHNMTADFQSGERILPEPHQPL*VQVLLL Trigger: CAGAAGCAAGACTTGAACGCAGAGAGGTTGATGAGG...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAAGTTCATACCCACTCTaGCCTCCGGACATCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPISSYPL*PPDIFS Trigger: TGAGAAGATGTCCGGAGGCCAGAGTGGGTATGAACT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATATGCTTCAGAAGCTTCTaGAATCTCTCGTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPICFRSF*NLSSSS Trigger: GCTGGAGGACGAGAGATTCCAGAAGCTTCTGAAGCA...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAACTAGATCTCAGATCTaGCTCGGAACTGCCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPITRSQI*LGTAHV Trigger: AACATGGGCAGTTCCGAGCCAGATCTGAGATCTAGT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAGATCTGGCTCGGAACTaGCCATGTTTTGATCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVEDLARN*PCFDPN Trigger: ATTTGGATCAAAACATGGGCAGTTCCGAGCCAGATC...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATACACTGCGATTTAACCTaGAGATGTACTGACTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIHCDLT*RCTDFA Trigger: AGCGAAGTCAGTACATCTGCAGGTTAAATCGCAGTG...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAGAGAAGAGGCTGGTATaGGAGCTTGATTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIEKRLV*ELDFSL Trigger: CAAAGAAAAATCAAGCTCTCATACCAGCCTCTTCTC...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR TCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAACTGGAGACTCAGTCTaGCCTTTTCAGCTAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVETGDSV*PFQLNL Trigger: CAAATTTAGCTGAAAAGGTCAGACTGAGTCTCCAGT...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTAAAGATTTCGGAGTTGTaGTATAATCACCATGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GLYKHNMTADFQSGERILKISEL*YNHHET Trigger: AGTTTCATGGTGATTATAGCACAACTCCGAAATCTT...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CCA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAGGAGTCCTCTTCTTTTaGGTAACGACTTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: DRISRKMTATKYFLVSVEGVLFF*VTTFPH Trigger: ATGTGGAAAAGTCGTTACCCAAAAGAAGAGGACTCC...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR GCA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATATTCTTGCAAGGCATTTaGTTGGAAGGAAGCAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIFLQGI*LEGSKL Trigger: TAATTTGCTTCCTTCCAAGCAAATGCCTTGCAAGAA...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CAA 72 bp | AATTATTCACAACAAATTTCTGGCTTGAGGAATTCTTaGTGGAATTGCTCGATACATGGTTCAAGTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NYSQQISGLRNS*WNCSIHGSSRF Trigger: GAATCTACTTGAACCATGTATCGAGCAATTCCACAAAGAATTCCTCAAGCCAGAAATTTGTTGTGAATAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| 3UTR CAA 72 bp | AGTCTTAACAAGAATTATTCACAACAAATTTCTGGCTaGAGGAATTCTTTGTGGAATTGCTCGATACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLNKNYSQQISG*RNSLWNCSIHG Trigger: ACCATGTATCGAGCAATTCCACAAAGAATTCCTCAAGCCAGAAATTTGTTGTGAATAATTCTTGTTAAGACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | GCCTGCAGCTCGTCATTGAGGCGACTCTGGCGGGTCAGCGAGGCCTaGAGGTCCAGCTCCAGGTCCAGAGAAGTGCGCACGGGGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACSSSLRRLWRVSEA*RSSSRSREVRTGHS Trigger: GGAATGCCCCGTGCGCACTTCTCTGGACCTGGAGCTGGACCTGCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 90 bp | CCTCTAGCTTCTGCCGTAAGCCTCTCAGGGCCTGCAGCTCGTCATTaGGGCGACTCTGGCGGGTCAGCGAGGCCTGCAGGTCCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLASAVSLSGPAARH*GDSGGSARPAGPAP Trigger: TGGAGCTGGACCTGCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGCCCTGAGAGGCTTACGGCAGAAGCTAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | AGCAGGCTCCTTCCTACACTGGCTTGTCTCAGGCCCCCTAGGGCATaGCTTCGGGTCCTCTGTGCAGCGGCTGCCCTCTGCCAAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRLLPTLACLRPPRA*LRVLCAAAALCQGN Trigger: GTTCCCTTGGCAGAGGGCAGCCGCTGCACAGAGGACCCGAAGCCATGCCCTAGGGGGCCTGAGACAAGCCAGTGTAGGAAGGAGCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGGCCTGCAGCTCGTCATaGAGGCGACTCTGGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWACSSS*RRLWRV Trigger: GACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGC...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 90 bp | TGCAGGTCCAGCTCCAGGTCCAGAGAAGTGCGCACGGGGCATTCCTaGGCAGTCCTCCTGAGGGTGGGCTGGCAAACCGCCCTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: CRSSSRSREVRTGHS*AVLLRVGWQTALLT Trigger: GGTCAAAAGGGCGGTTTGCCAGCCCACCCTCAGGAGGACTGCTCAGGAATGCCCCGTGCGCACTTCTCTGGACCTGGAGCTGGACCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | TCCTCCAGGTGCTGGCGCTCGGCTTCCAGGCGCTCCAGCTCCTCCTaGGAGCGCTTCTGCGGGGTGATAAACTGCAACTCCTTCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRCWRSASRRSSSS*ERFCGVINCNSFRS Trigger: ACTTCTGAAGGAGTTGCAGTTTATCACCCCGCAGAAGCGCTCGCAGGAGGAGCTGGAGCGCCTGGAAGCCGAGCGCCAGCACCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 90 bp | GCCCTGGCTGCTGTAATAGAGTTCACTGGAACTGAGGGAGTTGAGTaGCCCCCTGCTGGAGGTGTTCAGAGAGCCCCGACTGGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALAAVIEFTGTEGVE*PPAGGVQRAPTGGQ Trigger: CTGGCCTCCAGTCGGGGCTCTCTGAACACCTCCAGCAGGGGGTCACTCAACTCCCTCAGTTCCAGTGAACTCTATTACAGCAGCCAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | ATCTTCTCCCTGAAGGACTGCACCTGCCGAGGCTCCTTCTGGCTCTaGTCCCGCAGTCGGCACACATCCTTGGAGACCTGCCTCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFSLKDCTCRGSFWL*SRSRHTSLETCLIN Trigger: GTTGATGAGGCAGGTCTCCAAGGATGTGTGCCGACTGCGGGAGCAGAGCCAGAAGGAGCCTCGGCAGGTGCAGTCCTTCAGGGAGAAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | AGCCCCGACTGGAGGCCAGGGACCCTAGACTGCTCCCAGATGACATaGACAGTGTGCTGGAGGAGAGGCTTTGAAGTTGCGAGTACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPDWRPGTLDCSQMT*TVCWRRGFEVASTR Trigger: CCTTGTACTCGCAACTTCAAAGCCTCTCCTCCAGCACACTGTCCATGTCATCTGGGAGCAGTCTAGGGTCCCTGGCCTCCAGTCGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | AGGAGAGGTTGGGATGCTCCTCCCGAGTCTGAATCCAGCAAGGCCTaGTTTTCACCAAGGCCAACGTCAGCAAAGCGGCGACTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRGWDAPPESESSKA*FSPRPTSAKRRLSS Trigger: CGAGCTGAGTCGCCGCTTTGCTGACGTTGGCCTTGGTGAAAACCAGGCCTTGCTGGATTCAGACTCGGGAGGAGCATCCCAACCTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCCCTCCGTCAGTGGGGTaGTGTGGCTGCTGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCPPSVG*CGCWLS Trigger: TGACAGCCAGCAGCCACACAACCCCACTGACGGAGG...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | TGGCGCTCGGCTTCCAGGCGCTCCAGCTCCTCCTGCGAGCGCTTCTaGGGGGTGATAAACTGCAACTCCTTCAGAAGTTCTTCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WRSASRRSSSSCERF*GVINCNSFRSSSFS Trigger: TGAGAAAGAAGAACTTCTGAAGGAGTTGCAGTTTATCACCCCGCAGAAGCGCTCGCAGGAGGAGCTGGAGCGCCTGGAAGCCGAGCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | TGTCTCCAGCCACCGACTCGTCAGAGGCAGCAGCGGACACCCGAGTaGTCTTGTCTCCTCGAAGATGGAGTCCTCTTCTTTTGGGTAACG | + |
|
Preference number: 5 (lower is better) Translates to: CLQPPTRQRQQRTPE*SCLLEDGVLFFWVT Trigger: CGTTACCCAAAAGAAGAGGACTCCATCTTCGAGGAGACAAGACCACTCGGGTGTCCGCTGCTGCCTCTGACGAGTCGGTGGCTGGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | AGCTCCCCAGGGCAATCGCTCAGGCCTTTATCCTCAAGGAGAGGTTaGGATGCTCCTCCCGAGTCTGAATCCAGCAAGGCCTGGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPGQSLRPLSSRRG*DAPPESESSKAWFS Trigger: TGAAAACCAGGCCTTGCTGGATTCAGACTCGGGAGGAGCATCCCAACCTCTCCTTGAGGATAAAGGCCTGAGCGATTGCCCTGGGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGACCCTGCTCTGGACCTCGGGAGTCATGGTGCTAGTTCCTGTCTCCTGGTATCTCCAGAAATGCTaGTCTGTGACCCAGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGTLLWTSGVMVLVPVSWYLQKC*SVTQRQ Trigger: TTGACGCTGGGTCACAGACAAGCATTTCTGGAGATA...CCAGGAGACAGGAACTAGCACCATGACTCCCGAGGTCCAGAGCAGGGTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS-3UTR CAA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCCTCTGCGTTCAAGTCTaGCTTCTGCTCCTCTTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TATQAAALLLSLLGWVLSLCVQV*LLLLFR Trigger: ACGAAAGAGGAGCAGAAGCAAGACTTGAACGCAGAG...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 90 bp | CGGTGTTTACTGGCGGAGCAGAGATCCACTCTCAACGTCTTCTGTTaGAGGGCTGCCTGGGAAACGGCCACCCTGAACACATCGTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RCLLAEQRSTLNVFC*RAAWETATLNTSLY Trigger: GTACAACGATGTGTTCAGGGTGGCCGTTTCCCAGGCAGCCCTTCAACAGAAGACGTTGAGAGTGGATCTCTGCTCCGCCAGTAAACACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
||
| CDS TCA 90 bp | GTATTCGTCTCCTTATCGACCAGGGTGGGAAGTCCAGATGGCAGCTaGCCAGGGTCTTCAGCAGGCTCCTTCCTACACTGGCTTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFVSLSTRVGSPDGS*PGSSAGSFLHWLVS Trigger: TGAGACAAGCCAGTGTAGGAAGGAGCCTGCTGAAGACCCTGGTCAGCTGCCATCTGGACTTCCCACCCTGGTCGATAAGGAGACGAATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | ACTGGCGGAGCAGAGATCCACTCTCAACGTCTTCTGTTGAAGGGCTaGCTGGGAAACGGCCACCCTGAACACATCGTTGTACAGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGGAEIHSQRLLLKG*LGNGHPEHIVVQHR Trigger: TCTGTGCTGTACAACGATGTGTTCAGGGTGGCCGTTTCCCAGGCAGCCCTTCAACAGAAGACGTTGAGAGTGGATCTCTGCTCCGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCGTAGCCACCCTTCTCTaGAAGAAGGAAGTCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TATQAAALLLSLLGWVLSVATLL*KKEVQF Trigger: AAACTGGACTTCCTTCTTCAAGAGAAGGGTGGCTAC...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 90 bp | CAGGCCTTTATCCTCAAGGAGAGGTTGGGATGCTCCTCCCGAGTCTaGATCCAGCAAGGCCTGGTTTTCACCAAGGCCAACGTCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QAFILKERLGCSSRV*IQQGLVFTKANVSK Trigger: TTTGCTGACGTTGGCCTTGGTGAAAACCAGGCCTTGCTGGATTCAGACTCGGGAGGAGCATCCCAACCTCTCCTTGAGGATAAAGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | GAGAAGGTTTGTGAGCGCACTATCACGCTGTTTCTCACGAATGGATaGTGTCGAGAGCTGAGGCTGCTTCGGTCTTTAGGGCGAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EKVCERTITLFLTNG*CRELRLLRSLGRTA Trigger: GGCAGTTCGCCCTAAAGACCGAAGCAGCCTCAGCTCTCGACAGCATCCATTCGTGAGAAACAGCGTGATAGTGCGCTCACAAACCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | TCAGAGGCAGCAGCGGACACCCGAGTGGTCTTGTCTCCTCGAAGATaGAGTCCTCTTCTTTTGGGTAACGACTTTTCCACATCTGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SEAAADTRVVLSPRR*SPLLLGNDFSTSVA Trigger: CGCAACAGATGTGGAAAAGTCGTTACCCAAAAGAAGAGGACTCCATCTTCGAGGAGACAAGACCACTCGGGTGTCCGCTGCTGCCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | ACGGCAACGCAGGCGGCTGCACTTCTGCTCTCCCTGCTGGGATGGGTTTTATCCGGCTGGTATGAGAGCTaGATTTTTCTTTGTAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TATQAAALLLSLLGWVLSGWYES*IFLCRH Trigger: ATGCCTACAAAGAAAAATCAAGCTCTCATACCAGCC...GGATAAAACCCATCCCAGCAGGGAGAGCAGAAGTGCAGCCGCCTGCGTTGCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | ACATCCTTGGAGACCTGCCTCATCAACCTCTCTGCGTTCAAGTCTTaGTTCTGCTCCTCTTTCGTCTGTTCAGCCTGCTTCTCTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSLETCLINLSAFKS*FCSSFVCSACFSAC Trigger: GCAAGCAGAGAAGCAGGCTGAACAGACGAAAGAGGAGCAGAAGCAAGACTTGAACGCAGAGAGGTTGATGAGGCAGGTCTCCAAGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | ACACCCGAGTGGTCTTGTCTCCTCGAAGATGGAGTCCTCTTCTTTTaGGTAACGACTTTTCCACATCTGTTGCGCCCTCACACAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPEWSCLLEDGVLFF*VTTFPHLLRPHTAA Trigger: AGCTGCTGTGTGAGGGCGCAACAGATGTGGAAAAGTCGTTACCCAAAAGAAGAGGACTCCATCTTCGAGGAGACAAGACCACTCGGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | AGGCGCTCCAGCTCCTCCTGCGAGCGCTTCTGCGGGGTGATAAACTaGAACTCCTTCAGAAGTTCTTCTTTCTCATTAATCAGCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSSSSCERFCGVIN*NSFRSSSFSLISIN Trigger: GTTGATGCTGATTAATGAGAAAGAAGAACTTCTGAAGGAGTTGCAGTTTATCACCCCGCAGAAGCGCTCGCAGGAGGAGCTGGAGCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | TTGGAGACCTGCCTCATCAACCTCTCTGCGTTCAAGTCTTGCTTCTaGTCCTCTTTCGTCTGTTCAGCCTGCTTCTCTGCTTGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LETCLINLSAFKSCF*SSFVCSACFSACFR Trigger: TCTGAAGCAAGCAGAGAAGCAGGCTGAACAGACGAAAGAGGAGCAGAAGCAAGACTTGAACGCAGAGAGGTTGATGAGGCAGGTCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | TTCTACATCAGACACACTCATCCATGCCTGGGGCTGAGCAGGGCAATCTCAGGGCCTTTTCAGCTAAATTaGATCTGCTTCGAACCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FYIRHTHPCLGLSRAISGPFQLN*ICFEPQ Trigger: TTGGGGTTCGAAGCAGATCAAATTTAGCTGAAAAGG...CCCTGAGATTGCCCTGCTCAGCCCCAGGCATGGATGAGTGTGTCTGATGTAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAAAGGGATGCCACTGACTaGGAGGCCTCCGTCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YKHNMTADFQSGERILPERDATD*EASVSG Trigger: CCCACTGACGGAGGCCTCCAAGTCAGTGGCATCCCT...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCACAAACAAGGATTTTTaGGCCAAGGTTGAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCTNKDF*AKVELS Trigger: TGACAGCTCAACCTTGGCCAAAAAATCCTTGTTTGT...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 90 bp | GACATCCGCAGAGGAGGGAAGCAGAGCGACCCTAAAATACACTTTTaGAGAATGAGGTATCGAGAAGGCATGAAGATTTCGGAGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DIRRGGKQSDPKIHF*RMRYREGMKISELC Trigger: GCACAACTCCGAAATCTTCATGCCTTCTCGATACCTCATTCTTCAAAAGTGTATTTTAGGGTCGCTCTGCTTCCCTCCTCTGCGGATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | CAGTTTTCTTTCTGCCCCCGACCGCAGCTTTCTACAGCAGGAGTACACCTCTGCATGAAGATTTCGGAGTaGTGCTATAATCACCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: QFSFCPRPQLSTAGVHLCMKISE*CYNHHE Trigger: TTCATGGTGATTATAGCACAACTCCGAAATCTTCAT...GCAGAGGTGTACTCCTGCTGTAGAAAGCTGCGGTCGGGGGCAGAAAGAAAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAATCCTCAAGGAGAGGTaGGGATGCTCCTCCCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKPFNMDSNNRSGKRPPIILKER*GCSSRV Trigger: GACTCGGGAGGAGCATCCCAACCTCTCCTTGAGGAT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAACTCCTGGGCCAGTTCTaGTTCCACAGCCAAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DRISRKMTATKYFLVSVELLGQF*FHSQEL Trigger: GAGCTCTTGGCTGTGGAACAAGAACTGGCCCAGGAG...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 90 bp | AGTTCTGTCAGGATGGCTTTGGCTTCATTAAGTTCATACCCACTCTaGCCTCCGGACATCTTCTCATCAATTTGTTGCAGCGTTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVRMALASLSSYPL*PPDIFSSICCSVSK Trigger: CTTTGAAACGCTGCAACAAATTGATGAGAAGATGTCCGGAGGCCAGAGTGGGTATGAACTTAATGAAGCCAAAGCCATCCTGACAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAAGTCGGCACACATCCTaGGAGACCTGCCTCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LKPFNMDSNNRSGKRPPISRHTS*ETCLIN Trigger: GTTGATGAGGCAGGTCTCCAAGGATGTGTGCCGACT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 90 bp | GCTCCAGGCTCCTCATTTCCGTCTTCATTCTTCTTGCAAGGCATTTaGTTGGAAGGAAGCAAATTATACCACAGCATGAAGATCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: APGSSFPSSFFLQGI*LEGSKLYHSMKISL Trigger: CAATGAGATCTTCATGCTGTGGTATAATTTGCTTCCTTCCAAGCAAATGCCTTGCAAGAAGAATGAAGACGGAAATGAGGAGCCTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACAGCGTTTCAAAGCCTaGCTGCTTATAGAGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLYKHNMTADFQSGERILQRFKA*LLIEKF Trigger: GAACTTCTCTATAAGCAGCAAGGCTTTGAAACGCTG...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTAGGAACTGCCCATGTTTaGATCCAAATGAAATCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLYKHNMTADFQSGERILGTAHV*IQMKSL Trigger: GAGCGATTTCATTTGGATCAAAACATGGGCAGTTCC...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GGCCTGTATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTATGGAGTCCTCTTCTTTaGGGTAACGACTTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLYKHNMTADFQSGERILWSPLL*GNDFST Trigger: TGTGGAAAAGTCGTTACCCAAAAGAAGAGGACTCCA...TAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATACAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | CTGAAACCTTTCAATATGGACTCAAACAATAGATCTGGCAAACGTCCTCCTATAAGCCTGCTTCTCTGCTaGCTTCAGAAGCTTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LKPFNMDSNNRSGKRPPISLLLC*LQKLLE Trigger: TTCCAGAAGCTTCTGAAGCAAGCAGAGAAGCAGGCT...TATAGGAGGACGTTTGCCAGATCTATTGTTTGAGTCCATATTGAAAGGTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAATTAGCCATGCTTCTTTaGGCTTCTTCATACTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YKHNMTADFQSGERILPELAMLL*ASSYWR Trigger: TCTCCAGTATGAAGAAGCCAAAAGAAGCATGGCTAA...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAAGCATGAAGATCTCATaGGAAAATGGTAAATCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRISRKMTATKYFLVSVESMKIS*ENGKSA Trigger: GGCGGATTTACCATTTTCCAATGAGATCTTCATGCT...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | TATAAGCACAACATGACTGCTGACTTTCAGAGTGGAGAAAGGATTCTACCAGAATTGCAAGGCATTTGCTaGGAAGGAAGCAAATTATAC | + |
|
Preference number: 5 (lower is better) Translates to: YKHNMTADFQSGERILPELQGIC*EGSKLY Trigger: GTATAATTTGCTTCCTTCCAAGCAAATGCCTTGCAA...TTCTGGTAGAATCCTTTCTCCACTCTGAAAGTCAGCAGTCATGTTGTGCTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS-3UTR CAA 90 bp | GACAGAATCTCTAGGAAGATGACAGCTACAAAATACTTCCTAGTGAGTGTAGAAATATCAGGATCATATTaGGTGCTAGATGAAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: DRISRKMTATKYFLVSVEISGSY*VLDEDP Trigger: AGGGTCTTCATCTAGCACCAAATATGATCCTGATAT...TTCTACACTCACTAGGAAGTATTTTGTAGCTGTCATCTTCCTAGAGATTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | GAGCCCCGGGCGGCCATCAGCTCTTCCTCCAGGTGCTaGCGCTCGGCTTCCAGGCGCTCCAGCTCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EPRAAISSSSRC*RSASRRSSSSC Trigger: GCAGGAGGAGCTGGAGCGCCTGGAAGCCGAGCGCCAGCACCTGGAGGAAGAGCTGATGGCCGCCCGGGGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | CCTCTCAGGGCCTGCAGCTCGTCATTGAGGCGACTCTaGCGGGTCAGCGAGGCCTGCAGGTCCAGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLRACSSSLRRL*RVSEACRSSSR Trigger: CCTGGAGCTGGACCTGCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGCCCTGAGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | AGCTCCAGGTCCAGAGAAGTGCGCACGGGGCATTCCTaGGCAGTCCTCCTGAGGGTGGGCTGGCAAACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSREVRTGHS*AVLLRVGWQTA Trigger: GGCGGTTTGCCAGCCCACCCTCAGGAGGACTGCTCAGGAATGCCCCGTGCGCACTTCTCTGGACCTGGAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | TCTGCCGTAAGCCTCTCAGGGCCTGCAGCTCGTCATTaGGGCGACTCTGGCGGGTCAGCGAGGCCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAVSLSGPAARH*GDSGGSARPAG Trigger: ACCTGCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGCCCTGAGAGGCTTACGGCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | GCATGGCTTCGGGTCCTCTGTGCAGCGGCTGCCCTCTaGCAAGGGAACCCCAGACTCTCTCAAAGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AWLRVLCAAAAL*QGNPRLSQSRR Trigger: CCTGCGGCTTTGAGAGAGTCTGGGGTTCCCTTGGCAGAGGGCAGCCGCTGCACAGAGGACCCGAAGCCATGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | TCGTCATTGAGGCGACTCTGGCGGGTCAGCGAGGCCTaGAGGTCCAGCTCCAGGTCCAGAGAAGTGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSLRRLWRVSEA*RSSSRSREVRT Trigger: CGTGCGCACTTCTCTGGACCTGGAGCTGGACCTGCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGACGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | ACTTGGAGGCCTCCGTCAGTGGGGTTGTGTGGCTGCTaGCTGTCACTCCCACCCCACAGAGCCCACTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TWRPPSVGLCGC*LSLPPHRAHSG Trigger: GCCAGAGTGGGCTCTGTGGGGTGGGAGTGACAGCCAGCAGCCACACAACCCCACTGACGGAGGCCTCCAAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | GCCACTGACTTGGAGGCCTCCGTCAGTGGGGTTGTGTaGCTGCTGGCTGTCACTCCCACCCCACAGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ATDLEASVSGVV*LLAVTPTPQSP Trigger: TGGGCTCTGTGGGGTGGGAGTGACAGCCAGCAGCCACACAACCCCACTGACGGAGGCCTCCAAGTCAGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | CTTCCTACACTGGCTTGTCTCAGGCCCCCTAGGGCATaGCTTCGGGTCCTCTGTGCAGCGGCTGCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPTLACLRPPRA*LRVLCAAAALC Trigger: GCAGAGGGCAGCCGCTGCACAGAGGACCCGAAGCCATGCCCTAGGGGGCCTGAGACAAGCCAGTGTAGGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | GCAGTCCTCCTGAGGGTGGGCTGGCAAACCGCCCTTTaGACCCGCAAACTGCGCCGCTCAGTGGAGTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AVLLRVGWQTAL*TRKLRRSVEFR Trigger: GCGGAACTCCACTGAGCGGCGCAGTTTGCGGGTCAAAAGGGCGGTTTGCCAGCCCACCCTCAGGAGGACTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | TTCTGCCGTAAGCCTCTCAGGGCCTGCAGCTCGTCATaGAGGCGACTCTGGCGGGTCAGCGAGGCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FCRKPLRACSSS*RRLWRVSEACR Trigger: CCTGCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGCCCTGAGAGGCTTACGGCAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | TCCTCTAGCTTCTGCCGTAAGCCTCTCAGGGCCTGCAGCTCGTCATaGAGGCGACTCTGGCGGGTCAGCGAGGCCTGCAGGTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFCRKPLRACSSS*RRLWRVSEACRSSS Trigger: GGAGCTGGACCTGCAGGCCTCGCTGACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGCCCTGAGAGGCTTACGGCAGAAGCTAGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | CTGACTTGGAGGCCTCCGTCAGTGGGGTTGTGTGGCTaGTGGCTGTCACTCCCACCCCACAGAGCCCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LTWRPPSVGLCG*WLSLPPHRAHS Trigger: AGAGTGGGCTCTGTGGGGTGGGAGTGACAGCCAGCAGCCACACAACCCCACTGACGGAGGCCTCCAAGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | CTGAAGGACTGCACCTGCCGAGGCTCCTTCTGGCTCTaGTCCCGCAGTCGGCACACATCCTTGGAGACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LKDCTCRGSFWL*SRSRHTSLETC Trigger: GCAGGTCTCCAAGGATGTGTGCCGACTGCGGGAGCAGAGCCAGAAGGAGCCTCGGCAGGTGCAGTCCTTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | GTGACCCCCTGCTGGAGGTGTTCAGAGAGCCCCGACTaGAGGCCAGGGACCCTAGACTGCTCCCAGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: VTPCWRCSESPD*RPGTLDCSQMT Trigger: TGTCATCTGGGAGCAGTCTAGGGTCCCTGGCCTCCAGTCGGGGCTCTCTGAACACCTCCAGCAGGGGGTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | GGGATGCCACTGACTTGGAGGCCTCCGTCAGTGGGGTaGTGTGGCTGCTGGCTGTCACTCCCACCCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GMPLTWRPPSVG*CGCWLSLPPHR Trigger: TCTGTGGGGTGGGAGTGACAGCCAGCAGCCACACAACCCCACTGACGGAGGCCTCCAAGTCAGTGGCATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | AGCTCCTCTAGCTTCTGCCGTAAGCCTCTCAGGGCCTaGAGCTCGTCATTGAGGCGACTCTGGCGGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSFCRKPLRA*SSSLRRLWRVS Trigger: GCTGACCCGCCAGAGTCGCCTCAATGACGAGCTGCAGGCCCTGAGAGGCTTACGGCAGAAGCTAGAGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | AGAGAGAGGACCTGGAGGACAGGGATGCCACTGACTTaGAGGCCTCCGTCAGTGGGGTTGTGTGGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RERTWRTGMPLT*RPPSVGLCGCW Trigger: CCAGCAGCCACACAACCCCACTGACGGAGGCCTCCAAGTCAGTGGCATCCCTGTCCTCCAGGTCCTCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | CGCCGCTCTGGCCTTAGCTCCTCCTCCTCCTCCTCCTaGGCCAGTTCTTGTTCCACAGCCAAGAGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRSGLSSSSSSS*ASSCSTAKSSA Trigger: AGCTGAGCTCTTGGCTGTGGAACAAGAACTGGCCCAGGAGGAGGAGGAGGAGGAGCTAAGGCCAGAGCGGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | TCCTTATCGACCAGGGTGGGAAGTCCAGATGGCAGCTaGCCAGGGTCTTCAGCAGGCTCCTTCCTACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSTRVGSPDGS*PGSSAGSFLHW Trigger: CCAGTGTAGGAAGGAGCCTGCTGAAGACCCTGGTCAGCTGCCATCTGGACTTCCCACCCTGGTCGATAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | GCTTCCAGGCGCTCCAGCTCCTCCTGCGAGCGCTTCTaGGGGGTGATAAACTGCAACTCCTTCAGAAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASRRSSSSCERF*GVINCNSFRSS Trigger: AGAACTTCTGAAGGAGTTGCAGTTTATCACCCCGCAGAAGCGCTCGCAGGAGGAGCTGGAGCGCCTGGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | TCTCTTCCAATTTCAATCTCTCGGTTAGAGCCCTGCTaGGTGAGCCCCGGGCGGCCATCAGCTCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLPISISRLEPC*VSPGRPSALPP Trigger: TGGAGGAAGAGCTGATGGCCGCCCGGGGCTCACCCAGCAGGGCTCTAACCGAGAGATTGAAATTGGAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | TGGGATGCTCCTCCCGAGTCTGAATCCAGCAAGGCCTaGTTTTCACCAAGGCCAACGTCAGCAAAGCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: WDAPPESESSKA*FSPRPTSAKRR Trigger: TCGCCGCTTTGCTGACGTTGGCCTTGGTGAAAACCAGGCCTTGCTGGATTCAGACTCGGGAGGAGCATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | GGGCAATCGCTCAGGCCTTTATCCTCAAGGAGAGGTTaGGATGCTCCTCCCGAGTCTGAATCCAGCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GQSLRPLSSRRG*DAPPESESSKA Trigger: GGCCTTGCTGGATTCAGACTCGGGAGGAGCATCCCAACCTCTCCTTGAGGATAAAGGCCTGAGCGATTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | CCACCGACTCGTCAGAGGCAGCAGCGGACACCCGAGTaGTCTTGTCTCCTCGAAGATGGAGTCCTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PPTRQRQQRTPE*SCLLEDGVLFF Trigger: AAAGAAGAGGACTCCATCTTCGAGGAGACAAGACCACTCGGGTGTCCGCTGCTGCCTCTGACGAGTCGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | GCGTCCCAGCCAGGCATTCCTCCCTGCGGTGTTTACTaGCGGAGCAGAGATCCACTCTCAACGTCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ASQPGIPPCGVY*RSRDPLSTSSV Trigger: AACAGAAGACGTTGAGAGTGGATCTCTGCTCCGCCAGTAAACACCGCAGGGAGGAATGCCTGGCTGGGACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | TCTTCTGTTGAAGGGCTGCCTGGGAAACGGCCACCCTaGACACATCGTTGTACAGCACAGATTCGGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSVEGLPGKRPP*THRCTAQIRWG Trigger: CCCCCACCGAATCTGTGCTGTACAACGATGTGTTCAGGGTGGCCGTTTCCCAGGCAGCCCTTCAACAGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | CTCTGCTCCCGCAGTCGGCACACATCCTTGGAGACCTaGCTCATCAACCTCTCTGCGTTCAAGTCTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LCSRSRHTSLET*LINLSAFKSCF Trigger: GAAGCAAGACTTGAACGCAGAGAGGTTGATGAGGCAGGTCTCCAAGGATGTGTGCCGACTGCGGGAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | ATTCGTCTCCTTATCGACCAGGGTGGGAAGTCCAGATaGCAGCTGACCAGGGTCTTCAGCAGGCTCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: IRLLIDQGGKSR*QLTRVFSRLLP Trigger: AGGAAGGAGCCTGCTGAAGACCCTGGTCAGCTGCCATCTGGACTTCCCACCCTGGTCGATAAGGAGACGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | GCGGTGTTTACTGGCGGAGCAGAGATCCACTCTCAACGTCTTCTGTaGAAGGGCTGCCTGGGAAACGGCCACCCTGAACACATCGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: AVFTGGAEIHSQRLL*KGCLGNGHPEHIVV Trigger: TACAACGATGTGTTCAGGGTGGCCGTTTCCCAGGCAGCCCTTCAACAGAAGACGTTGAGAGTGGATCTCTGCTCCGCCAGTAAACACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | GCTGTAATAGAGTTCACTGGAACTGAGGGAGTTGAGTaGCCCCCTGCTGGAGGTGTTCAGAGAGCCCCGACT | + |
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Preference number: 6 (lower is better) Translates to: AVIEFTGTEGVE*PPAGGVQRAPT Trigger: AGTCGGGGCTCTCTGAACACCTCCAGCAGGGGGTCACTCAACTCCCTCAGTTCCAGTGAACTCTATTACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | TTTTCTCTTCCAATTTCAATCTCTCGGTTAGAGCCCTaGTGGGTGAGCCCCGGGCGGCCATCAGCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FSLPISISRLEP*WVSPGRPSALP Trigger: AGGAAGAGCTGATGGCCGCCCGGGGCTCACCCAGCAGGGCTCTAACCGAGAGATTGAAATTGGAAGAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | CTGTCACTGTCACTGCGATTTAACCTGCAGATGTACTaGCTTCGCTCGCCTGGGGAGAAGGTTTGTGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LSLSLRFNLQMY*LRSPGEKVCER Trigger: GCGCTCACAAACCTTCTCCCCAGGCGAGCGAAGTCAGTACATCTGCAGGTTAAATCGCAGTGACAGTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | GCAGAGATCCACTCTCAACGTCTTCTGTTGAAGGGCTaGCTGGGAAACGGCCACCCTGAACACATCGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: AEIHSQRLLLKG*LGNGHPEHIVV Trigger: TACAACGATGTGTTCAGGGTGGCCGTTTCCCAGGCAGCCCTTCAACAGAAGACGTTGAGAGTGGATCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | TGTGAGCGCACTATCACGCTGTTTCTCACGAATGGATaGTGTCGAGAGCTGAGGCTGCTTCGGTCTTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: CERTITLFLTNG*CRELRLLRSLG Trigger: CCCTAAAGACCGAAGCAGCCTCAGCTCTCGACAGCATCCATTCGTGAGAAACAGCGTGATAGTGCGCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | TCAAAGTCGGTAGGGAACTGGTGTGGAGAGGTGTCATaGGAGGACCCTGGAAATACGCTGTCCAGGACAAGA | + |
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Preference number: 6 (lower is better) Translates to: SKSVGNWCGEVS*EDPGNTLSRTR Trigger: TCTTGTCCTGGACAGCGTATTTCCAGGGTCCTCCCATGACACCTCTCCACACCAGTTCCCTACCGACTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | CCACTTCATCTGTATTCGTCTCCTTATCGACCAGGGTaGGAAGTCCAGATGGCAGCTGACCAGGGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PLHLYSSPYRPG*EVQMAADQGLQ Trigger: CTGAAGACCCTGGTCAGCTGCCATCTGGACTTCCCACCCTGGTCGATAAGGAGACGAATACAGATGAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | GACACCCGAGTGGTCTTGTCTCCTCGAAGATGGAGTCCTCTTCTTTaGGGTAACGACTTTTCCACATCTGTTGCGCCCTCACACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DTRVVLSPRRWSPLL*GNDFSTSVAPSHSS Trigger: GCTGCTGTGTGAGGGCGCAACAGATGTGGAAAAGTCGTTACCCAAAAGAAGAGGACTCCATCTTCGAGGAGACAAGACCACTCGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | GACCCAGCGTCAAGGGTCTGTCTGGACAGAGAGAGATaGGAATTCACAGGACTAGATCTCAGATCTGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: DPASRVCLDRER*EFTGLDLRSGS Trigger: CGAGCCAGATCTGAGATCTAGTCCTGTGAATTCTCATCTCTCTCTGTCCAGACAGACCCTTGACGCTGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | GATGTACTGACTTCGCTCGCCTGGGGAGAAGGTTTGTaGGCGCACTATCACGCTGTTTCTCACGAATGGATG | + |
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Preference number: 6 (lower is better) Translates to: DVLTSLAWGEGL*AHYHAVSHEWM Trigger: CATCCATTCGTGAGAAACAGCGTGATAGTGCGCTCACAAACCTTCTCCCCAGGCGAGCGAAGTCAGTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | ATCTCATTGGAAAATGGTAAATCCGCCAGGCTGATCTaGGTCCCAGCCAGGCATTCCTCCCTGCGGTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: ISLENGKSARLI*VPARHSSLRCL Trigger: TAAACACCGCAGGGAGGAATGCCTGGCTGGGACGCAGATCAGCCTGGCGGATTTACCATTTTCCAATGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | ACCCTAGACTGCTCCCAGATGACATGGACAGTGTGCTaGAGGAGAGGCTTTGAAGTTGCGAGTACAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLDCSQMTWTVC*RRGFEVASTRK Trigger: CTTCCTTGTACTCGCAACTTCAAAGCCTCTCCTCCAGCACACTGTCCATGTCATCTGGGAGCAGTCTAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | TGTCGAGAGCTGAGGCTGCTTCGGTCTTTAGGGCGAACTGCCATATaGCTGTCAACCACTTCATCTGTATTCGTCTCCTTATCGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: CRELRLLRSLGRTAI*LSTTSSVFVSLSTR Trigger: CCTGGTCGATAAGGAGACGAATACAGATGAAGTGGTTGACAGCAATATGGCAGTTCGCCCTAAAGACCGAAGCAGCCTCAGCTCTCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | TGCCTCATCAACCTCTCTGCGTTCAAGTCTTGCTTCTaGTCCTCTTTCGTCTGTTCAGCCTGCTTCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: CLINLSAFKSCF*SSFVCSACFSA Trigger: AGCAGAGAAGCAGGCTGAACAGACGAAAGAGGAGCAGAAGCAAGACTTGAACGCAGAGAGGTTGATGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | GTGGATGGTGGTGATGGGTCCGGAAGGAATGTAGCCACCCTTCTCTaGAAGAAGGAAGTCCAGTTTATACTGATAGTCTGTGTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: VDGGDGSGRNVATLL*KKEVQFILIVCVHL Trigger: CAGATGGACACAGACTATCAGTATAAACTGGACTTCCTTCTTCAAGAGAAGGGTGGCTACATTCCTTCCGGACCCATCACCACCATCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | AATTTGATCTGCTTCGAACCCCAATATCTCCAGAAATaGTTGTCTGTGACCCAGCGTCAAGGGTCTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: NLICFEPQYLQK*LSVTQRQGSVW Trigger: CCAGACAGACCCTTGACGCTGGGTCACAGACAAGCATTTCTGGAGATATTGGGGTTCGAAGCAGATCAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS GCA 72 bp | AGCTCCTCCTGCGAGCGCTTCTGCGGGGTGATAAACTaGAACTCCTTCAGAAGTTCTTCTTTCTCATTAATC | + |
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Preference number: 6 (lower is better) Translates to: SSSCERFCGVIN*NSFRSSSFSLI Trigger: GATTAATGAGAAAGAAGAACTTCTGAAGGAGTTGCAGTTTATCACCCCGCAGAAGCGCTCGCAGGAGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | GAACTCTTTGTATCGTATCTGAGTCCTATCTGCACCTaGGCAGTCTCCACAATGGTGACATCCTCTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: ELFVSYLSPICT*AVSTMVTSSSL Trigger: CAGTGAAGAGGATGTCACCATTGTGGAGACTGCCCAGGTGCAGATAGGACTCAGATACGATACAAAGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | CCCACTCTGGCCTCCGGACATCTTCTCATCAATTTGTaGCAGCGTTTCAAAGCCTTGCTGCTTATAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PTLASGHLLINL*QRFKALLLIEK Trigger: CTTCTCTATAAGCAGCAAGGCTTTGAAACGCTGCAACAAATTGATGAGAAGATGTCCGGAGGCCAGAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | CTGAGGCTGCTTCGGTCTTTAGGGCGAACTGCCATATaGCTGTCAACCACTTCATCTGTATTCGTCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LRLLRSLGRTAI*LSTTSSVFVSL Trigger: TAAGGAGACGAATACAGATGAAGTGGTTGACAGCAATATGGCAGTTCGCCCTAAAGACCGAAGCAGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | GAACTGATGGCCTTTCTGATAGACTTCAGTTCTGTCAGGATGGCTTaGGCTTCATTAAGTTCATACCCACTCTGGCCTCCGGACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: ELMAFLIDFSSVRMA*ASLSSYPLWPPDIF Trigger: GAAGATGTCCGGAGGCCAGAGTGGGTATGAACTTAATGAAGCCAAAGCCATCCTGACAGAACTGAAGTCTATCAGAAAGGCCATCAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | ATTTGCTTGGAAGGAAGCAAATTATACCACAGCATGAAGATCTCATaGGAAAATGGTAAATCCGCCAGGCTGATCTGCGTCCCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ICLEGSKLYHSMKIS*ENGKSARLICVPAR Trigger: CCTGGCTGGGACGCAGATCAGCCTGGCGGATTTACCATTTTCCAATGAGATCTTCATGCTGTGGTATAATTTGCTTCCTTCCAAGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CCA 72 bp | AGGATGGCTTTGGCTTCATTAAGTTCATACCCACTCTaGCCTCCGGACATCTTCTCATCAATTTGTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RMALASLSSYPL*PPDIFSSICCS Trigger: GCTGCAACAAATTGATGAGAAGATGTCCGGAGGCCAGAGTGGGTATGAACTTAATGAAGCCAAAGCCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | ATACCCACTCTGGCCTCCGGACATCTTCTCATCAATTaGTTGCAGCGTTTCAAAGCCTTGCTGCTTATAGAG | + |
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Preference number: 6 (lower is better) Translates to: IPTLASGHLLIN*LQRFKALLLIE Trigger: CTCTATAAGCAGCAAGGCTTTGAAACGCTGCAACAAATTGATGAGAAGATGTCCGGAGGCCAGAGTGGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | GGTGATGGGTCCGGAAGGAATGTAGCCACCCTTCTCTaGAAGAAGGAAGTCCAGTTTATACTGATAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GDGSGRNVATLL*KKEVQFILIVC Trigger: ACAGACTATCAGTATAAACTGGACTTCCTTCTTCAAGAGAAGGGTGGCTACATTCCTTCCGGACCCATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | GCCTCCGGACATCTTCTCATCAATTTGTTGCAGCGTTTCAAAGCCTaGCTGCTTATAGAGAAGTTCTTGCTTCATGTGGGAGAGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASGHLLINLLQRFKA*LLIEKFLLHVGEFS Trigger: AGAGAACTCTCCCACATGAAGCAAGAACTTCTCTATAAGCAGCAAGGCTTTGAAACGCTGCAACAAATTGATGAGAAGATGTCCGGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | GAAGGAAGCAAATTATACCACAGCATGAAGATCTCATaGGAAAATGGTAAATCCGCCAGGCTGATCTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: EGSKLYHSMKIS*ENGKSARLICV Trigger: GACGCAGATCAGCCTGGCGGATTTACCATTTTCCAATGAGATCTTCATGCTGTGGTATAATTTGCTTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 90 bp | CCAGGCTCCTCATTTCCGTCTTCATTCTTCTTGCAAGGCATTTGCTaGGAAGGAAGCAAATTATACCACAGCATGAAGATCTCATTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PGSSFPSSFFLQGIC*EGSKLYHSMKISLE Trigger: TTCCAATGAGATCTTCATGCTGTGGTATAATTTGCTTCCTTCCAAGCAAATGCCTTGCAAGAAGAATGAAGACGGAAATGAGGAGCCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | TGCTTCTTTTGGCTTCTTCATACTGGAGACTCAGTCTaGCCTTTTCAGCTAAATTTGATCTGCTTCGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: CFFWLLHTGDSV*PFQLNLICFEP Trigger: GGGTTCGAAGCAGATCAAATTTAGCTGAAAAGGTCAGACTGAGTCTCCAGTATGAAGAAGCCAAAAGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | GTGGAGATCTCAGCTTTTAAAATATCAGGATCATATTaGGTGCTAGATGAAGACCCTGAGAAGAGGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VEISAFKISGSY*VLDEDPEKRLV Trigger: TACCAGCCTCTTCTCAGGGTCTTCATCTAGCACCAAATATGATCCTGATATTTTAAAAGCTGAGATCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS CAA 72 bp | CATCTTCTCATCAATTTGTTGCAGCGTTTCAAAGCCTaGCTGCTTATAGAGAAGTTCTTGCTTCATGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: HLLINLLQRFKA*LLIEKFLLHVG Trigger: TCCCACATGAAGCAAGAACTTCTCTATAAGCAGCAAGGCTTTGAAACGCTGCAACAAATTGATGAGAAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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| CDS TCA 72 bp | AAGATTTCGGAGTTGTGCTATAATCACCATGAAACTTaGACTCTTTGTATCGTATCTGAGTCCTATCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: KISELCYNHHET*TLCIVSESYLH Trigger: GTGCAGATAGGACTCAGATACGATACAAAGAGTTCAAGTTTCATGGTGATTATAGCACAACTCCGAAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057561.9 |
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