Pregenerated sensors for WSCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020811Ensembl transcript IDs: ENSMUST00000021168.14, ENSMUST00000108510.2, ENSMUST00000108511.8, ENSMUST00000150531.2
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCATaGATCAATGCACTAGAGCAGTGTTCAGCCCACTGGTATAACCGC | + |
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Preference number: 1 (lower is better) Translates to: HPAACVPAPMLPRGP*INALEQCSAHWYNR Trigger: GCGGTTATACCAGTGGGCTGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR CCA 90 bp | ATTTGTGCCCAATTGAGCCCAGGAAACCCAGGGTCTCCCAAAGCCTaGAGCGTGTGTGAGGCAGATAGTCAGTCTCTGGCACATTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: ICAQLSPGNPGSPKA*SVCEADSQSLAHCV Trigger: CACACAATGTGCCAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTTTCCTGGGCTCAATTGGGCACAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR CCA 90 bp | GGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTaGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGT | + |
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Preference number: 1 (lower is better) Translates to: GLPKPGACVRQIVSL*HIVCVCVCVCVSIC Trigger: ACAAATGGACACACACACACACACACACACACACACAATGTGCCAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGTCTaGCCCACCCCACTCAAGTGGCTTAGGCACATTAAAATGGTCACT | + |
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Preference number: 1 (lower is better) Translates to: VCVCPFVCVCKAGSV*PTPLKWLRHIKMVT Trigger: AGTGACCATTTTAATGTGCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGACAAATGGACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR CAA 90 bp | CAATATCCCAGAGCCAAGGGCCCCCAAAAGCCAATTTGTGCCCAATaGAGCCCAGGAAACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QYPRAKGPQKPICAQ*SPGNPGSPKAWSVC Trigger: ACACACGCTCCAGGCTTTGGGAGACCCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGGGGGCCCTTGGCTCTGGGATATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR GCA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACGTGTGCCAGCCCCCATaGTTCCCAGGGGTCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYVCQPP*FPGVHG Trigger: TCCATGGACCCCTGGGAAGCATGGGGGCTGGCACAC...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGCCTTCAAGAACACCCTaGTGCCTGTGTGCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVSICLCVQSWEPSRTP*CLCASP Trigger: GGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGG...CTCCCAGCTTTGCACACACAGACAAATGGACACACACACACACACACACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGGGCCCCCAAAAGCCAATTTGTGCCCAATTGAGCCCAGGAAACCCAGGACTGTGAGAATGGGGTaGTGTCTAAGTGTGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SQGPPKANLCPIEPRKPRTVRMG*CLSVSE Trigger: CTCAGACACACTTAGACATCACCCCATTCTCACAGT...CCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGGGGGCCCTTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCAAAGCTGGGAGTGTCTaGCCCACCCCACTCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PPVLSALLRSIVSPQHNIKAGSV*PTPLKW Trigger: CCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTT...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGTCTCTGGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGCCTTCAAGAACACCCTaGTGCCTGTGTGCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SQSLAHCVCVCVCVCVHLPSRTP*CLCASP Trigger: GGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGG...CAAATGGACACACACACACACACACACACACACACAATGTGCCAGAGACTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR TCA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACAAAGCTGGGAGTGTCTaGCCCACCCCACTCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYKAGSV*PTPLKW Trigger: CCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTT...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTAAAGCTGGGAGTGTCTaGCCCACCCCACTCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: QSVYVPPVLSALLRSIVSKAGSV*PTPLKW Trigger: CCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTT...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCCAATTTGTGCCCAATTaGGCCCAGGAAACCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SSPQCTTQINSVSPAQYPQFVPN*AQETQG Trigger: ACCCTGGGTTTCCTGGGCTCAATTGGGCACAAATTG...GGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR GCA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACCTGCCTCAGATCTCCTaGACACAAAGCAGCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYLPQIS*TQSSPF Trigger: GAAGGGGCTGCTTTGTGTGCAGGAGATCTGAGGCAG...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR TCA 90 bp | ATACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTCAATTTGTGCCCAATTaGGCCCAGGAAACCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: IQYPSATVCLCTSSPQCTQFVPN*AQETQG Trigger: ACCCTGGGTTTCCTGGGCTCAATTGGGCACAAATTG...AGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACTGCCTCAGATCTCCTaGACACAAAGCAGCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RMSQHTHLWDVRQAVRVILPQIS*TQSSPF Trigger: GAAGGGGCTGCTTTGTGTGCAGGAGATCTGAGGCAG...TATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGACTTCCCAGGGGTCCATaGATCAATGCACTAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SPQCTTQINSVSPAQYPRLPRGP*INALEQ Trigger: CTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAG...TCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CCA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACCTTCCCAGGGGTCCATaGATCAATGCACTAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYLPRGP*INALEQ Trigger: CTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAG...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGACTGTGAGAATGGGGTaGTGTCTAAGTGTGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVSICLCVQSWETVRMG*CLSVSE Trigger: CTCAGACACACTTAGACATCACCCCATTCTCACAGT...CTCCCAGCTTTGCACACACAGACAAATGGACACACACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGTCTCTGGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGCCCACCCCACTCAAGTaGCTTAGGCACATTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SQSLAHCVCVCVCVCVHLPTPLK*LRHIKM Trigger: CATTTTAATGTGCCTAAGCCACTTGAGTGGGGTGGG...CAAATGGACACACACACACACACACACACACACACAATGTGCCAGAGACTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCACCCCACTCAAGTaGCTTAGGCACATTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: QSVYVPPVLSALLRSIVSPTPLK*LRHIKM Trigger: CATTTTAATGTGCCTAAGCCACTTGAGTGGGGTGGG...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATCAGATAGTCAGTCTCTaGCACATTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QDVTAHTFMGCQTSSQGHQIVSL*HIVCVC Trigger: ACACACACACACAATGTGCCAGAGACTGACTATCTG...ATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACCAAAAGCCAATTTGTaGCCAATTGAGCCCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RMSQHTHLWDVRQAVRVIPKANL*PIEPRK Trigger: TTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGG...TATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR GCA 72 bp | TCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTaGTGCCTGTGTGCCAGCCCCCATGCTTCCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SPAHKAAPSRTP*CLCASPHASQG Trigger: CCCCTGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR CCA 72 bp | GCCTGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCATaGATCAATGCACTAGAGCAGTGTTCAGCCCACTGG | + |
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Preference number: 3 (lower is better) Translates to: ACVPAPMLPRGP*INALEQCSAHW Trigger: CCAGTGGGCTGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGGCACACAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR TCA 72 bp | GAGCCAAGGGCCCCCAAAAGCCAATTTGTGCCCAATTaGGCCCAGGAAACCCAGGGTCTCCCAAAGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: EPRAPKSQFVPN*AQETQGLPKPG Trigger: TCCAGGCTTTGGGAGACCCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGGGGGCCCTTGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR GCA 72 bp | TCCCTCTGGGTAAGCCTTGTGCTGCCTCAGATCTCCTaGACACAAAGCAGCCCCTTCAAGAACACCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SLWVSLVLPQIS*TQSSPFKNTLL Trigger: CAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTGAGGCAGCACAAGGCTTACCCAGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR TCA 72 bp | CTGAGGATGCGTAAGTGTCCGGCAAGGAGTGTCCTGTaGTACACATCCCTCTGGGTAAGCCTTGTGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: LRMRKCPARSVL*YTSLWVSLVLP Trigger: AGGCAGCACAAGGCTTACCCAGAGGGATGTGTATCACAGGACACTCCTTGCCGGACACTTACGCATCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGCCAATTTGTGCCCAATaGAGCCCAGGAAACCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: VPGCHSTHIYGMSDKQSGPICAQ*SPGNPG Trigger: CCCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGG...CCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR TCA 72 bp | GGTCACTGTGAGAATGGGGTGATGTCTAAGTGTGTCTaGGGATGCGTAAGTGTCCGGCAAGGAGTGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GHCENGVMSKCV*GCVSVRQGVSC Trigger: ACAGGACACTCCTTGCCGGACACTTACGCATCCTCAGACACACTTAGACATCACCCCATTCTCACAGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR CCA 72 bp | AAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTaGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: KPGACVRQIVSL*HIVCVCVCVCV Trigger: CACACACACACACACACACACACACACAATGTGCCAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CAA 90 bp | ATACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTCCAATTTGTGCCCAATaGAGCCCAGGAAACCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: IQYPSATVCLCTSSPQCTPICAQ*SPGNPG Trigger: CCCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGG...AGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCTCAGTCTCTGGCACATaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PPVLSALLRSIVSPQHNISVSGT*CVCVCV Trigger: CACACACACACACACACACAATGTGCCAGAGACTGA...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR TCA 72 bp | TGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGTCTaGCCCACCCCACTCAAGTGGCTTAGGCACATTAAA | + |
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Preference number: 3 (lower is better) Translates to: CPFVCVCKAGSV*PTPLKWLRHIK Trigger: TTTAATGTGCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGACAAATGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCGCCGGCCACGCCTCCTaGAGCTGCCCTCTTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PSRTPCCLCASPHASQGSAGHAS*SCPLCC Trigger: ACAACAAAGAGGGCAGCTTCAGGAGGCGTGGCCGGC...GGACCCCTGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAAACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGGCCACTGGTAAGGCCTaGAGGCTGCCGGGAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PGNPGSPKAWSVCEADSQATGKA*RLPGAR Trigger: CCGGGCTCCCGGCAGCCTGCAGGCCTTACCAGTGGC...CTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTTTCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCTTCTTGGAGCCTGGCTaGTGCAGCCCCACGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: PSRTPCCLCASPHASQGSFLEPG*CSPTLY Trigger: GTACAGCGTGGGGCTGCAGCAGCCAGGCTCCAAGAA...GGACCCCTGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGTGTTCACCTCCGGACTCAGGGTaGGAGGCCCCTGCGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PAPMLPRGPWINALEQCSPPDSG*EAPAGH Trigger: GTGACCCGCAGGGGCCTCCCACCCTGAGTCCGGAGG...TGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCCGCTCACGGACACATTaGGGAAAGCCACCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PSRTPCCLCASPHASQGSRSRTH*GKPPSP Trigger: GGGAGATGGTGGCTTTCCTCAATGTGTCCGTGAGCG...GGACCCCTGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCTCTCTGGGGCCTGACTaGACAGTGCTCCATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PSRTPCCLCASPHASQGSSLGPD*TVLHPQ Trigger: CTGTGGATGGAGCACTGTGCAGTCAGGCCCCAGAGA...GGACCCCTGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCGGGTCACTGGTGAGGTaGTGGAGCCAACGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SVCAKLGVSDPPHSSGLGGSLVR*WSQRRR Trigger: GCGGCGGCGTTGGCTCCACCACCTCACCAGTGACCC...GCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCACAGGGTCACTGGTGAGGTaGTGGAGCCAACGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VCAKLGVSDPPHSSGLGTGSLVR*WSQRRR Trigger: GCGGCGGCGTTGGCTCCACCACCTCACCAGTGACCC...TGTGCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGTGTTCAGCAGGAGCAGCAGGCTaGCGGTCATCAGGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPMLPRGPWINALEQCSAGAAG*RSSGRR Trigger: CCGCCTACCTGATGACCGGCAGCCTGCTGCTCCTGC...TGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCATCTTCACACAGATGGTaGGCCGGCTCCGCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPFKNTLLPVCQPPCFPSSHRW*AGSANG Trigger: ACCATTGGCGGAGCCGGCGCACCATCTGTGTGAAGA...TGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCCAAGGGCCCCCGGGTCACTGGTGAGGTaGTGGAGCCAACGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRSIVSPQHNIPEPRAPGSLVR*WSQRRR Trigger: GCGGCGGCGTTGGCTCCACCACCTCACCAGTGACCC...GGGGGCCCTTGGCTCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCCCGCTTCTTGGAGCCTaGCTGCTGCAGCCCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVCAKLGVSDPPHSSGLGPLLGA*LLQPHA Trigger: AGCGTGGGGCTGCAGCAGCCAGGCTCCAAGAAGCGG...GCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | AGCCAAGGGCCCCCAAAAGCCAATTTGTGCCCAATTGAGCCCAGGAAACCCAGGCAGTGCGCCGCTTCTTaGAGCCTGGCTGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGPPKANLCPIEPRKPRQCAAS*SLAAAA Trigger: GGCTGCAGCAGCCAGGCTCCAAGAAGCGGCGCACTG...CCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGGGGGCCCTTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | GGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTGGCACATCAGTGCGCCGCTTCTTaGAGCCTGGCTGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSPKAWSVCEADSQSLAHQCAAS*SLAAAA Trigger: GGCTGCAGCAGCCAGGCTCCAAGAAGCGGCGCACTG...ATGTGCCAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGCCATCTCCCGAAGTGTaGGCACCAGGCTGTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CVPAPMLPRGPWINALEQPSPEV*APGCAA Trigger: TGCGGCACAGCCTGGTGCCCACACTTCGGGAGATGG...CTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGGCACACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCATGGGCACATACTCTCTaGGCAGCCCAGCCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPFKNTLLPVCQPPCFPWAHTL*AAQPSC Trigger: ACAACTGGGCTGGGCTGCCCAGAGAGTATGTGCCCA...TGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | TCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCGCCGGCCACGCCTCCTaGAGCTGCCCTCTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVCAKLGVSDPPHSSGLGAGHAS*SCPLCC Trigger: ACAACAAAGAGGGCAGCTTCAGGAGGCGTGGCCGGC...GCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | TCAGATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGGCAGGAGCAGCAGGCTaGCGGTCATCAGGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLLHTKQPLQEHPAACVAGAAG*RSSGRR Trigger: CCGCCTACCTGATGACCGGCAGCCTGCTGCTCCTGC...CACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | TACACATCCCTCTGGGTAAGCCTTGTGCTGCCTCAGATCTCCTGCACACAAAGCAGGGTGGGAGGCCCCTaGGGGTCACTGGTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTSLWVSLVLPQISCTQSRVGGP*GSLVRW Trigger: CCACCTCACCAGTGACCCGCAGGGGCCTCCCACCCT...GCTTTGTGTGCAGGAGATCTGAGGCAGCACAAGGCTTACCCAGAGGGATGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | TCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCGCGTGCTCGATCAGGTaGCTTGCCCATGTGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCTQSSPFKNTLLPVCQPACSIR*LAHVFP Trigger: TGGGAACACATGGGCAAGGCACCTGATCGAGCACGC...GGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGGCACAGCCCCGCACATaGAGCCTTTCTCTCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGNPGSPKAWSVCEADSQAQPRT*SLSLPC Trigger: GCAAGGGAGAGAAAGGCTCCATGTGCGGGGCTGTGC...CTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTTTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCTCTCCACAGTCATGTTaGCCTGTGTCATGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRTPCCLCASPHASQGSSPQSC*PVSWRR Trigger: CCTCCTCCATGACACAGGCCAACATGACTGTGGAGA...GGACCCCTGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGCGCCGGCTCCGCCAATaGTCCTTCTCACCCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGNPGSPKAWSVCEADSQRRLRQ*SFSPLN Trigger: GTTCAAGGGTGAGAAGGACCATTGGCGGAGCCGGCG...CTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTTTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TCCGGCAAGGAGTGTCCTGTGATACACATCCCTCTGGGTAAGCCTTGTGCTGCCCCATCTCCCGAAGTGTaGGCACCAGGCTGTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGKECPVIHIPLGKPCAAPSPEV*APGCAA Trigger: TGCGGCACAGCCTGGTGCCCACACTTCGGGAGATGG...GGCAGCACAAGGCTTACCCAGAGGGATGTGTATCACAGGACACTCCTTGCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | TCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCGCCACTCTGGCCCGCTaGAGGAGCAGCAGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSPQCTTQINSVSPAQYPATLAR*RSSRLP Trigger: CGGCAGCCTGCTGCTCCTGCAGCGGGCCAGAGTGGC...GGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | AGTCAGGGTCATACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCGCCACTCTGGCCCGCTaGAGGAGCAGCAGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQGHTVPISNSLSMYLQSATLAR*RSSRLP Trigger: CGGCAGCCTGCTGCTCCTGCAGCGGGCCAGAGTGGC...GGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGTATGACCCTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | GTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCACATTCTTGGAGCCTGGCTaGTGCAGCCCCACGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCAKLGVSDPPHSSGLGTFLEPG*CSPTLY Trigger: GTACAGCGTGGGGCTGCAGCAGCCAGGCTCCAAGAA...TGTGCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | ACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCTCGATCAGGTGCCTTaGCCATGTGTTCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKQPLQEHPAACVPAPMLLDQVP*PCVPSS Trigger: GGAGCTGGGAACACATGGGCAAGGCACCTGATCGAG...AAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGGCGTGCTCGATCAGGTaGCTTGCCCATGTGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVPAPMLPRGPWINALEQACSIR*LAHVFP Trigger: TGGGAACACATGGGCAAGGCACCTGATCGAGCACGC...CTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGGCACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCCCGTGTAGAAGCCAGTaGCGTGCTCGATCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCAKLGVSDPPHSSGLGPCRSQ*RARSGA Trigger: GGCACCTGATCGAGCACGCCACTGGCTTCTACACGG...GCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | GGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTGGCACATCCGTGTAGAAGCCAGTaGCGTGCTCGATCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSPKAWSVCEADSQSLAHPCRSQ*RARSGA Trigger: GGCACCTGATCGAGCACGCCACTGGCTTCTACACGG...ATGTGCCAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TCAGATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCATCTCCCGAAGTGTaGGCACCAGGCTGTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDLLHTKQPLQEHPAACVPSPEV*APGCAA Trigger: TGCGGCACAGCCTGGTGCCCACACTTCGGGAGATGG...CACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGCCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGAGGAGAAGGTGTGGGTaGCATTCTCAGGCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVPAPMLPRGPWINALEQRRRCG*HSQAVG Trigger: TCCCACTGCCTGAGAATGTCACCCACACCTTCTCCT...CTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGGCACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGTGTTCACGCTCACGGACACATTaGGGAAAGCCACCATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAPMLPRGPWINALEQCSRSRTH*GKPPSP Trigger: GGGAGATGGTGGCTTTCCTCAATGTGTCCGTGAGCG...TGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | AGCCAAGGGCCCCCAAAAGCCAATTTGTGCCCAATTGAGCCCAGGAAACCCAGGCCTTCATCTCAGGGGTaGAGGGCTCCTGGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGPPKANLCPIEPRKPRPSSQG*RAPGHE Trigger: CTCATGACCAGGAGCCCTTCACCCCTGAGATGAAGG...CCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGGGGGCCCTTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATGCCACTGGTAAGGCCTaGAGGCTGCCGGGAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QDVTAHTFMGCQTSSQGHATGKA*RLPGAR Trigger: CCGGGCTCCCGGCAGCCTGCAGGCCTTACCAGTGGC...ATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | ACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACAGGGTGGGAGGCCCCTaGGGGTCACTGGTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVPISNSLSMYLQSSVHYRVGGP*GSLVRW Trigger: CCACCTCACCAGTGACCCGCAGGGGCCTCCCACCCT...GTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGAGGGTGGGAGGCCCCTaGGGGTCACTGGTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVSICLCVQSWERVGGP*GSLVRW Trigger: CCACCTCACCAGTGACCCGCAGGGGCCTCCCACCCT...CTCCCAGCTTTGCACACACAGACAAATGGACACACACACACACACACACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGTGTTCAGGAACTTCCTGTCTGTaGACCGGGTGTCTTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPMLPRGPWINALEQCSGTSCL*TGCLAR Trigger: CCGTGCAAGACACCCGGTGCACAGACAGGAAGTTCC...TGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CAGATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCTCGATCAGGTGCCTTaGCCATGTGTTCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QISCTQSSPFKNTLLPVCLDQVP*PCVPSS Trigger: GGAGCTGGGAACACATGGGCAAGGCACCTGATCGAG...GCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | AACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTGTCTTCACACAGATGGTaGGCCGGCTCCGCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPGSPKAWSVCEADSQSLSSHRW*AGSANG Trigger: ACCATTGGCGGAGCCGGCGCACCATCTGTGTGAAGA...CAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGTCTTCACACAGATGGTaGGCCGGCTCCGCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISCTQSSPFKNTLLPVCQSSHRW*AGSANG Trigger: ACCATTGGCGGAGCCGGCGCACCATCTGTGTGAAGA...CTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGGTAAGCCTTGTGCTGCCTCAGATCTCCTGCACACAAAGCAGCCCCTTCTCCGGCCACTCTCGTaGGTCTTCACACAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLGKPCAASDLLHTKQPLLRPLS*VFTQMV Trigger: CACCATCTGTGTGAAGACGCACGAGAGTGGCCGGAG...AAGGGGCTGCTTTGTGTGCAGGAGATCTGAGGCAGCACAAGGCTTACCCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTGACATTCTCAGGCAGTaGGAAGCACCCTCGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKQPLQEHPAACVPAPMLDILRQ*EAPSVG Trigger: ACCTACCGAGGGTGCTTCCCACTGCCTGAGAATGTC...AAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGGACATTCTCAGGCAGTaGGAAGCACCCTCGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGNPGSPKAWSVCEADSQDILRQ*EAPSVG Trigger: ACCTACCGAGGGTGCTTCCCACTGCCTGAGAATGTC...CTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTTTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | CTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCCAAGGGCCCCCCGCCGGCTCCGCCAATaGTCCTTCTCACCCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRSIVSPQHNIPEPRAPRRLRQ*SFSPLN Trigger: GTTCAAGGGTGAGAAGGACCATTGGCGGAGCCGGCG...GGGGGCCCTTGGCTCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTGCCACTCTGGCCCGCTaGAGGAGCAGCAGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSATLAR*RSSRLP Trigger: CGGCAGCCTGCTGCTCCTGCAGCGGGCCAGAGTGGC...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTGCCACTGGTAAGGCCTaGAGGCTGCCGGGAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSATGKA*RLPGAR Trigger: CCGGGCTCCCGGCAGCCTGCAGGCCTTACCAGTGGC...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | CTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCCAAGGGCCCCCCTCCGGCCACTCTCGTaGGTCTTCACACAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRSIVSPQHNIPEPRAPLRPLS*VFTQMV Trigger: CACCATCTGTGTGAAGACGCACGAGAGTGGCCGGAG...GGGGGCCCTTGGCTCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | ACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCCCTCCGGACTCAGGGTaGGAGGCCCCTGCGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVCLCTSSPQCTTQINSVPPDSG*EAPAGH Trigger: GTGACCCGCAGGGGCCTCCCACCCTGAGTCCGGAGG...GACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGTGTTCATGCCTCTATTATGGTTaGCTGGTCCAGAGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAPMLPRGPWINALEQCSCLYYG*LVQRPP Trigger: CGGAGGCCTCTGGACCAGCCAACCATAATAGAGGCA...TGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAGCACAGCCCCGCACATaGAGCCTTTCTCTCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVHLSVCAKLGVSDPPHSAQPRT*SLSLPC Trigger: GCAAGGGAGAGAAAGGCTCCATGTGCGGGGCTGTGC...TGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGACAAATGGACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCCGCTTCTTGGAGCCTaGCTGCTGCAGCCCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQDVTAHTFMGCQTSSQGPLLGA*LLQPHA Trigger: AGCGTGGGGCTGCAGCAGCCAGGCTCCAAGAAGCGG...ACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCCCGCTTCTTGGAGCCTaGCTGCTGCAGCCCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQCTTQINSVSPAQYPPLLGA*LLQPHA Trigger: AGCGTGGGGCTGCAGCAGCCAGGCTCCAAGAAGCGG...GGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACCAGTGCGCCGCTTCTTaGAGCCTGGCTGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVPISNSLSMYLQSSVHYQCAAS*SLAAAA Trigger: GGCTGCAGCAGCCAGGCTCCAAGAAGCGGCGCACTG...GTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | CAGATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCTGTTGGCCTGTGTCATaGAGGAGGAGAAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QISCTQSSPFKNTLLPVCCWPVS*RRRRCG Trigger: CCCACACCTTCTCCTCCTCCATGACACAGGCCAACA...GCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCACATTAGCGTCTTCACACAGATaGTGCGCCGGCTCCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CAKLGVSDPPHSSGLGTLASSHR*CAGSAN Trigger: ATTGGCGGAGCCGGCGCACCATCTGTGTGAAGACGC...TAATGTGCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCTGTGTCTCTGGGGCCTaGCTGCACAGTGCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ARMSQHTHLWDVRQAVRVCVSGA*LHSAPS Trigger: GGATGGAGCACTGTGCAGTCAGGCCCCAGAGACACA...GACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCACCTTCATCTCAGGGGTaGAGGGCTCCTGGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CVHLSVCAKLGVSDPPHSPSSQG*RAPGHE Trigger: CTCATGACCAGGAGCCCTTCACCCCTGAGATGAAGG...TGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGACAAATGGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCACTCGATCAGGTGCCTTaGCCATGTGTTCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVHLSVCAKLGVSDPPHSLDQVP*PCVPSS Trigger: GGAGCTGGGAACACATGGGCAAGGCACCTGATCGAG...TGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGACAAATGGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAGCGTGCTCGATCAGGTaGCTTGCCCATGTGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVHLSVCAKLGVSDPPHSACSIR*LAHVFP Trigger: TGGGAACACATGGGCAAGGCACCTGATCGAGCACGC...TGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGACAAATGGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCGCGTCTTCACACAGATaGTGCGCCGGCTCCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARMSQHTHLWDVRQAVRVASSHR*CAGSAN Trigger: ATTGGCGGAGCCGGCGCACCATCTGTGTGAAGACGC...GACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| 3UTR CAA 72 bp | ACAATATCCCAGAGCCAAGGGCCCCCAAAAGCCAATTaGTGCCCAATTGAGCCCAGGAAACCCAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TISQSQGPPKAN*CPIEPRKPRVS Trigger: GGAGACCCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGGGGGCCCTTGGCTCTGGGATATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCTGTGTCTCTGGGGCCTaGCTGCACAGTGCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PPVLSALLRSIVSPQHNICVSGA*LHSAPS Trigger: GGATGGAGCACTGTGCAGTCAGGCCCCAGAGACACA...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACGCCGGCCACGCCTCCTaGAGCTGCCCTCTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYAGHAS*SCPLCC Trigger: ACAACAAAGAGGGCAGCTTCAGGAGGCGTGGCCGGC...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCTTGGAGCCTGGCTGCTaGAGCCCCACGCTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: PPVLSALLRSIVSPQHNILEPGC*SPTLYT Trigger: TGTGTACAGCGTGGGGCTGCAGCAGCCAGGCTCCAA...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | TCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCTTGGAGCCTGGCTGCTaGAGCCCCACGCTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: SSPQCTTQINSVSPAQYPLEPGC*SPTLYT Trigger: TGTGTACAGCGTGGGGCTGCAGCAGCCAGGCTCCAA...GGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | GTGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCTCTGGGGCCTGACTaGACAGTGCTCCATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGCHSTHIYGMSDKQSGSLGPD*TVLHPQ Trigger: CTGTGGATGGAGCACTGTGCAGTCAGGCCCCAGAGA...CCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCCAAGGGCCCCCCTTTGCTCTTCCAATTaGGGTCAGGGGCATAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRSIVSPQHNIPEPRAPLCSSN*GQGHSP Trigger: TGGGCTATGCCCCTGACCGCAATTGGAAGAGCAAAG...GGGGGCCCTTGGCTCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | ACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACGCACAGCCCCGCACATaGAGCCTTTCTCTCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVPISNSLSMYLQSSVHYAQPRT*SLSLPC Trigger: GCAAGGGAGAGAAAGGCTCCATGTGCGGGGCTGTGC...GTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCCAAGGGCCCCCAAATGTTGGCCTGTGTCATaGAGGAGGAGAAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSIVSPQHNIPEPRAPKCWPVS*RRRRCG Trigger: CCCACACCTTCTCCTCCTCCATGACACAGGCCAACA...TTTGGGGGCCCTTGGCTCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCATGTTGGCCTGTGTCATaGAGGAGGAGAAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVHLSVCAKLGVSDPPHSCWPVS*RRRRCG Trigger: CCCACACCTTCTCCTCCTCCATGACACAGGCCAACA...TGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACACACAGACAAATGGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | GTGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTGGGCACATACTCTCTaGGCAGCCCAGCCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPGCHSTHIYGMSDKQSGWAHTL*AAQPSC Trigger: ACAACTGGGCTGGGCTGCCCAGAGAGTATGTGCCCA...CCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | AGTCAGGGTCATACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCCCTGGCCCTCCTCACTaGAGCATCCCAGGTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQGHTVPISNSLSMYLQSPGPPH*SIPGNC Trigger: GCAATTACCTGGGATGCTTCAGTGAGGAGGGCCAGG...GGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGTATGACCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCTGGCCCTCCTCACTaGAGCATCCCAGGTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPVLSALLRSIVSPQHNIPGPPH*SIPGNC Trigger: GCAATTACCTGGGATGCTTCAGTGAGGAGGGCCAGG...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | GTGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCTCCCTTGCACTCCTaGTTGCACTCCTTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPGCHSTHIYGMSDKQSGSPLHS*LHSFRL Trigger: CAGCCTGAAGGAGTGCAATCAGGAGTGCAAGGGAGA...CCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | GTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCTGTGTCTCTGGGGCCTaGCTGCACAGTGCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VCLCTSSPQCTTQINSVSCVSGA*LHSAPS Trigger: GGATGGAGCACTGTGCAGTCAGGCCCCAGAGACACA...GGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | TCAGATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGGCAGGAACTGTGTTCTaGGGAGAAACTTCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDLLHTKQPLQEHPAACVAGTVF*GETSGV Trigger: GACTCCAGAAGTTTCTCCGCAGAACACAGTTCCTGC...CACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATTTGGAGCCTGGCTGCTaGAGCCCCACGCTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: QDVTAHTFMGCQTSSQGHLEPGC*SPTLYT Trigger: TGTGTACAGCGTGGGGCTGCAGCAGCCAGGCTCCAA...ATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACCTCCGGCCACTCTCGTaGGTCTTCACACAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVPISNSLSMYLQSSVHYLRPLS*VFTQMV Trigger: CACCATCTGTGTGAAGACGCACGAGAGTGGCCGGAG...GTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCACATTAGAGGAGGAGAAGGTGTaGGTGACATTCTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CAKLGVSDPPHSSGLGTLEEEKV*VTFSGS Trigger: ACTGCCTGAGAATGTCACCCACACCTTCTCCTCCTC...TAATGTGCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCCAAGGGCCCCCAAAGAGGAGGAGAAGGTGTaGGTGACATTCTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRSIVSPQHNIPEPRAPKEEEKV*VTFSGS Trigger: ACTGCCTGAGAATGTCACCCACACCTTCTCCTCCTC...TTTGGGGGCCCTTGGCTCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAAAGCTGGGAGTGTCTGACCCACCCCACTCAAGTGGCTTAGGCACATTATCTCCACAGTCATGTTaGCCTGTGTCATGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CAKLGVSDPPHSSGLGTLSPQSC*PVSWRR Trigger: CCTCCTCCATGACACAGGCCAACATGACTGTGGAGA...TAATGTGCCTAAGCCACTTGAGTGGGGTGGGTCAGACACTCCCAGCTTTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGACGCCGGCTCCGCCAATaGTCCTTCTCACCCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPQCTTQINSVSPAQYPRRRLRQ*SFSPLN Trigger: GTTCAAGGGTGAGAAGGACCATTGGCGGAGCCGGCG...TCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCGTCTTCACACAGATaGTGCGCCGGCTCCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPQCTTQINSVSPAQYPRASSHR*CAGSAN Trigger: ATTGGCGGAGCCGGCGCACCATCTGTGTGAAGACGC...TCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGACCTGGCCCTCCTCACTaGAGCATCCCAGGTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQCTTQINSVSPAQYPRPGPPH*SIPGNC Trigger: GCAATTACCTGGGATGCTTCAGTGAGGAGGGCCAGG...TCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACTCTCTGGGGCCTGACTaGACAGTGCTCCATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYSLGPD*TVLHPQ Trigger: CTGTGGATGGAGCACTGTGCAGTCAGGCCCCAGAGA...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR GCA 90 bp | ATACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTGGAACTTCCTGTCTGTaGACCGGGTGTCTTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: IQYPSATVCLCTSSPQCTGTSCL*TGCLAR Trigger: CCGTGCAAGACACCCGGTGCACAGACAGGAAGTTCC...AGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCTCTATTATGGTTGGCTaGTCCAGAGGCCTCCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ARMSQHTHLWDVRQAVRVSIMVG*SRGLRT Trigger: AGTCCGGAGGCCTCTGGACCAGCCAACCATAATAGA...GACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTGCCTCTATTATGGTTaGCTGGTCCAGAGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TVPISNSLSMYLQSSVHYCLYYG*LVQRPP Trigger: CGGAGGCCTCTGGACCAGCCAACCATAATAGAGGCA...GTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGTGCCTCTATTATGGTTaGCTGGTCCAGAGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVSICLCVQSWECLYYG*LVQRPP Trigger: CGGAGGCCTCTGGACCAGCCAACCATAATAGAGGCA...CTCCCAGCTTTGCACACACAGACAAATGGACACACACACACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCGTGTAGAAGCCAGTaGCGTGCTCGATCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSPCRSQ*RARSGA Trigger: GGCACCTGATCGAGCACGCCACTGGCTTCTACACGG...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGTCTCTGGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGTGGGCACATACTCTCTaGGCAGCCCAGCCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSLAHCVCVCVCVCVHLWAHTL*AAQPSC Trigger: ACAACTGGGCTGGGCTGCCCAGAGAGTATGTGCCCA...CAAATGGACACACACACACACACACACACACACACAATGTGCCAGAGACTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACTCTCCCTTGCACTCCTaGTTGCACTCCTTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYSPLHS*LHSFRL Trigger: CAGCCTGAAGGAGTGCAATCAGGAGTGCAAGGGAGA...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | AGTCAGTCTCTGGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGAGGAGAAGGTGTGGGTaGCATTCTCAGGCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQSLAHCVCVCVCVCVHLRRRCG*HSQAVG Trigger: TCCCACTGCCTGAGAATGTCACCCACACCTTCTCCT...CAAATGGACACACACACACACACACACACACACACAATGTGCCAGAGACTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCGCTCACGGACACATTaGGGAAAGCCACCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSRSRTH*GKPPSP Trigger: GGGAGATGGTGGCTTTCCTCAATGTGTCCGTGAGCG...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCTTCATCTCAGGGGTaGAGGGCTCCTGGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSPSSQG*RAPGHE Trigger: CTCATGACCAGGAGCCCTTCACCCCTGAGATGAAGG...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | GTGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGAGCCTTTCTCTCCCTTaGACTCCTGATTGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPGCHSTHIYGMSDKQSGSLSLP*TPDCTP Trigger: AGGAGTGCAATCAGGAGTGCAAGGGAGAGAAAGGCT...CCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCGAGGAGGAGAAGGTGTaGGTGACATTCTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQCTTQINSVSPAQYPEEEKV*VTFSGS Trigger: ACTGCCTGAGAATGTCACCCACACCTTCTCCTCCTC...GGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | GCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCTCCGGATCAGCAGGATaGCCGAGTCAAACATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARMSQHTHLWDVRQAVRVSGSAG*PSQTSQ Trigger: TTGAGATGTTTGACTCGGCCATCCTGCTGATCCGGA...GACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTAGGAGAAGGTGTGGGTaGCATTCTCAGGCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSRRRCG*HSQAVG Trigger: TCCCACTGCCTGAGAATGTCACCCACACCTTCTCCT...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGACTTTGCTCTTCCAATTaGGGTCAGGGGCATAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SPQCTTQINSVSPAQYPRLCSSN*GQGHSP Trigger: TGGGCTATGCCCCTGACCGCAATTGGAAGAGCAAAG...TCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | ATACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTTCTATTATGGTTGGCTaGTCCAGAGGCCTCCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IQYPSATVCLCTSSPQCTSIMVG*SRGLRT Trigger: AGTCCGGAGGCCTCTGGACCAGCCAACCATAATAGA...AGTGCACTGAGGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGTCTCTGGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGTCTATTATGGTTGGCTaGTCCAGAGGCCTCCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SQSLAHCVCVCVCVCVHLSIMVG*SRGLRT Trigger: AGTCCGGAGGCCTCTGGACCAGCCAACCATAATAGA...CAAATGGACACACACACACACACACACACACACACAATGTGCCAGAGACTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTGACATTCTCAGGCAGTaGGAAGCACCCTCGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSDILRQ*EAPSVG Trigger: ACCTACCGAGGGTGCTTCCCACTGCCTGAGAATGTC...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TCCGGCAAGGAGTGTCCTGTGATACACATCCCTCTGGGTAAGCCTTGTGCTGCCAGAGGAAACTCTTTCTaGGAACAAAATCCAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKECPVIHIPLGKPCAARGNSF*EQNPEH Trigger: GTGTTCTGGATTTTGTTCCCAGAAAGAGTTTCCTCT...GGCAGCACAAGGCTTACCCAGAGGGATGTGTATCACAGGACACTCCTTGCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | ATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGAGAGGAAACTCTTTCTaGGAACAAAATCCAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ISCTQSSPFKNTLLPVCQRGNSF*EQNPEH Trigger: GTGTTCTGGATTTTGTTCCCAGAAAGAGTTTCCTCT...CTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCTCCGGATCAGCAGGATaGCCGAGTCAAACATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: PPVLSALLRSIVSPQHNISGSAG*PSQTSQ Trigger: TTGAGATGTTTGACTCGGCCATCCTGCTGATCCGGA...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | GTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCGCAGGAACTGTGTTCTaGGGAGAAACTTCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCLCTSSPQCTTQINSVSAGTVF*GETSGV Trigger: GACTCCAGAAGTTTCTCCGCAGAACACAGTTCCTGC...GGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCAGGAACTGTGTTCTaGGGAGAAACTTCTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SPQCTTQINSVSPAQYPRAGTVF*GETSGV Trigger: GACTCCAGAAGTTTCTCCGCAGAACACAGTTCCTGC...TCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | AGTCAGTCTCTGGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGAGCCTTTCTCTCCCTTaGACTCCTGATTGCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SQSLAHCVCVCVCVCVHLSLSLP*TPDCTP Trigger: AGGAGTGCAATCAGGAGTGCAAGGGAGAGAAAGGCT...CAAATGGACACACACACACACACACACACACACACAATGTGCCAGAGACTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCTTTGCTCTTCCAATTaGGGTCAGGGGCATAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVYVPPVLSALLRSIVSLCSSN*GQGHSP Trigger: TGGGCTATGCCCCTGACCGCAATTGGAAGAGCAAAG...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR GCA 90 bp | ACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCAGCCTTTCTCTCCCTTaGACTCCTGATTGCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVCLCTSSPQCTTQINSVSLSLP*TPDCTP Trigger: AGGAGTGCAATCAGGAGTGCAAGGGAGAGAAAGGCT...GACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | AGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATATCCGGATCAGCAGGATaGCCGAGTCAAACATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RMSQHTHLWDVRQAVRVISGSAG*PSQTSQ Trigger: TTGAGATGTTTGACTCGGCCATCCTGCTGATCCGGA...TATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTCCATTTGTCTGTGTGTGCAAAGCTGGGAGAGAGGAAACTCTTTCTaGGAACAAAATCCAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVSICLCVQSWERGNSF*EQNPEH Trigger: GTGTTCTGGATTTTGTTCCCAGAAAGAGTTTCCTCT...CTCCCAGCTTTGCACACACAGACAAATGGACACACACACACACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CCA 90 bp | CAGGCAGTGGGAAGCACCCTCGGTAGGTGGCAGTGCGCCGCTTCTTaGAGCCTGGCTGCTGCAGCCCCACGCTGTACACAGAGAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QAVGSTLGRWQCAAS*SLAAAAPRCTQRAG Trigger: GCCGGCTCTCTGTGTACAGCGTGGGGCTGCAGCAGCCAGGCTCCAAGAAGCGGCGCACTGCCACCTACCGAGGGTGCTTCCCACTGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGCAGTGCGCCGCTTCTaGGAGCCTGGCTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPFKNTLLPVCQPPCFPAVRRF*EPGCCS Trigger: GCTGCAGCAGCCAGGCTCCAAGAAGCGGCGCACTGC...TGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CCA 90 bp | GCAGCCCCACGCTGTACACAGAGAGCCGGCGCACAGCCCCGCACATaGAGCCTTTCTCTCCCTTGCACTCCTGATTGCACTCCTTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AAPRCTQRAGAQPRT*SLSLPCTPDCTPSG Trigger: GCCTGAAGGAGTGCAATCAGGAGTGCAAGGGAGAGAAAGGCTCCATGTGCGGGGCTGTGCGCCGGCTCTCTGTGTACAGCGTGGGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 90 bp | CCCGCTGCAGGAGCAGCAGGCTGCCGGTCATCAGGTAGGCGGCCGTaGGGAAGAGTAGCAGGAACTGTGTTCTGCGGAGAAACTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAAGAAGCRSSGRRP*GRVAGTVFCGETSG Trigger: TCCAGAAGTTTCTCCGCAGAACACAGTTCCTGCTACTCTTCCTCACGGCCGCCTACCTGATGACCGGCAGCCTGCTGCTCCTGCAGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 ENSMUST00000150531.2 |
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| CDS GCA 90 bp | AGGATGGCCGAGTCAAACATCTCAATCTCCCTCCGGCCACTCTCGTaGGTCTTCACACAGATGGTGCGCCGGCTCCGCCAATGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RMAESNISISLRPLS*VFTQMVRRLRQWSF Trigger: GAAGGACCATTGGCGGAGCCGGCGCACCATCTGTGTGAAGACGCACGAGAGTGGCCGGAGGGAGATTGAGATGTTTGACTCGGCCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCCAGTCTCCACAGTCATGTaGGCCTGTGTCATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPFKNTLLPVCQPPCFPVSTVM*ACVMEE Trigger: CTCCTCCATGACACAGGCCAACATGACTGTGGAGAC...TGGGAAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | TACACATCCCTCTGGGTAAGCCTTGTGCTGCCTCAGATCTCCTGCACACAAAGCGGCAGCCCAGCCCAGTaGTGGTCACGCAAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YTSLWVSLVLPQISCTQSGSPAQ*WSRKAW Trigger: CCAGGCCTTGCGTGACCACAACTGGGCTGGGCTGCC...GCTTTGTGTGCAGGAGATCTGAGGCAGCACAAGGCTTACCCAGAGGGATGTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS GCA 90 bp | CAGGCTGACACGTGTGGCCGGCAGCCTATTCCCACAGTAGCACTCTaGACCAGCCTCCAAGCCAGCATAGACATAAGACCGCTCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QADTCGRQPIPTVAL*TSLQASIDIRPLST Trigger: TGTGCTGAGCGGTCTTATGTCTATGCTGGCTTGGAGGCTGGTGCAGAGTGCTACTGTGGGAATAGGCTGCCGGCCACACGTGTCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGTGTTCAGCTCGATCAGGTGCCTaGCCCATGTGTTCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAPMLPRGPWINALEQCSARSGA*PMCSQL Trigger: GAGCTGGGAACACATGGGCAAGGCACCTGATCGAGC...TGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 90 bp | GCCGCAGCTCCTCATAGTGCACGACCAGCAGCCGCTTCCCATACTTaGGCCAGTCTAGGACATGTGAGGACCACCAGGAGGCATAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: AAAPHSARPAAASHT*ASLGHVRTTRRHSY Trigger: ATAGCTATGCCTCCTGGTGGTCCTCACATGTCCTAGACTGGCTCAAGTATGGGAAGCGGCTGCTGGTCGTGCACTATGAGGAGCTGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CCA 90 bp | GGACTCCTCAGTGTGTCCACATCAAGTAGTAGGTCAGGACTACTGTaGGGATCACGAAGGCTCCTGCCGTCCAGTAGACCCACACCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLLSVSTSSSRSGLL*GSRRLLPSSRPTPS Trigger: ACTGGGTGTGGGTCTACTGGACGGCAGGAGCCTTCGTGATCCCCACAGTAGTCCTGACCTACTACTTGATGTGGACACACTGAGGAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | AACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTGTTGCCTCTATTATGGTaGGCTGGTCCAGAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NPGSPKAWSVCEADSQSLLPLLW*AGPEAS Trigger: GGAGGCCTCTGGACCAGCCAACCATAATAGAGGCAA...CAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | CAGATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCTTGCCTCTATTATGGTaGGCTGGTCCAGAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QISCTQSSPFKNTLLPVCLPLLW*AGPEAS Trigger: GGAGGCCTCTGGACCAGCCAACCATAATAGAGGCAA...GCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | TCCGGCAAGGAGTGTCCTGTGATACACATCCCTCTGGGTAAGCCTTGTGCTGCCGTCTCCACAGTCATGTaGGCCTGTGTCATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGKECPVIHIPLGKPCAAVSTVM*ACVMEE Trigger: CTCCTCCATGACACAGGCCAACATGACTGTGGAGAC...GGCAGCACAAGGCTTACCCAGAGGGATGTGTATCACAGGACACTCCTTGCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | AGCCAAGGGCCCCCAAAAGCCAATTTGTGCCCAATTGAGCCCAGGAAACCCAGGGTCTCCACAGTCATGTaGGCCTGTGTCATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQGPPKANLCPIEPRKPRVSTVM*ACVMEE Trigger: CTCCTCCATGACACAGGCCAACATGACTGTGGAGAC...CCTGGGTTTCCTGGGCTCAATTGGGCACAAATTGGCTTTTGGGGGCCCTTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | TCCGGCAAGGAGTGTCCTGTGATACACATCCCTCTGGGTAAGCCTTGTGCTGCCTCGCTCACGGACACATaGAGGAAAGCCACCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGKECPVIHIPLGKPCAASLTDT*RKATIS Trigger: GGAGATGGTGGCTTTCCTCAATGTGTCCGTGAGCGA...GGCAGCACAAGGCTTACCCAGAGGGATGTGTATCACAGGACACTCCTTGCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | GGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATACGGCAGCCCAGCCCAGTaGTGGTCACGCAAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCHSTHIYGMSDKQSGSYGSPAQ*WSRKAW Trigger: CCAGGCCTTGCGTGACCACAACTGGGCTGGGCTGCC...GTATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 90 bp | AATTGCGGTCAGGGGCATAGCCCAAGTGTCCAGCGCATTTCCTGTTaGATTCAGCAACTAGGGACCGGTAGGGGTTCCGGATCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NCGQGHSPSVQRISC*IQQLGTGRGSGSAG Trigger: TCCTGCTGATCCGGAACCCCTACCGGTCCCTAGTTGCTGAATTCAACAGGAAATGCGCTGGACACTTGGGCTATGCCCCTGACCGCAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | CTACTCAGATCAATAGTGTCTCCCCAGCACAATATCCCAGAGCCAAGGGCCCCCTTGCCTCTATTATGGTaGGCTGGTCCAGAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRSIVSPQHNIPEPRAPLPLLW*AGPEAS Trigger: GGAGGCCTCTGGACCAGCCAACCATAATAGAGGCAA...GGGGGCCCTTGGCTCTGGGATATTGTGCTGGGGAGACACTATTGATCTGAGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | ACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCGCAGTGCGCCGCTTCTaGGAGCCTGGCTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVCLCTSSPQCTTQINSVAVRRF*EPGCCS Trigger: GCTGCAGCAGCCAGGCTCCAAGAAGCGGCGCACTGC...GACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | TCCGGCAAGGAGTGTCCTGTGATACACATCCCTCTGGGTAAGCCTTGTGCTGCCTGGTCCTTCTCACCCTaGAACCCCTTGTTGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGKECPVIHIPLGKPCAAWSFSP*NPLLYR Trigger: CCTGTACAACAAGGGGTTCAAGGGTGAGAAGGACCA...GGCAGCACAAGGCTTACCCAGAGGGATGTGTATCACAGGACACTCCTTGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | GGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTGGCACATTGGTCCTTCTCACCCTaGAACCCCTTGTTGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPKAWSVCEADSQSLAHWSFSP*NPLLYR Trigger: CCTGTACAACAAGGGGTTCAAGGGTGAGAAGGACCA...ATGTGCCAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGCCAGCCCCCATGCTTCCAGCGCATTTCCTGTaGAATTCAGCAACTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TKQPLQEHPAACVPAPMLPAHFL*NSATRD Trigger: GTCCCTAGTTGCTGAATTCAACAGGAAATGCGCTGG...AAGCATGGGGGCTGGCACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCCATGCTTCCCAGGGGTCCATGGATCAATGCACTAGAGCAGTGTTCAAGCCGCTTCCCATACTaGAGCCAGTCTAGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: PAPMLPRGPWINALEQCSSRFPY*SQSRTC Trigger: ACATGTCCTAGACTGGCTCAAGTATGGGAAGCGGCT...TGAACACTGCTCTAGTGCATTGATCCATGGACCCCTGGGAAGCATGGGGGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | TCCGGCAAGGAGTGTCCTGTGATACACATCCCTCTGGGTAAGCCTTGTGCTGCCAGCCGCTTCCCATACTaGAGCCAGTCTAGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: SGKECPVIHIPLGKPCAASRFPY*SQSRTC Trigger: ACATGTCCTAGACTGGCTCAAGTATGGGAAGCGGCT...GGCAGCACAAGGCTTACCCAGAGGGATGTGTATCACAGGACACTCCTTGCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | TCAGATCTCCTGCACACAAAGCAGCCCCTTCAAGAACACCCTGCTGCCTGTGTGTCGCTCACGGACACATaGAGGAAAGCCACCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDLLHTKQPLQEHPAACVSLTDT*RKATIS Trigger: GGAGATGGTGGCTTTCCTCAATGTGTCCGTGAGCGA...CACACAGGCAGCAGGGTGTTCTTGAAGGGGCTGCTTTGTGTGCAGGAGATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCGCTCGATCAGGTGCCTaGCCCATGTGTTCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPVLSALLRSIVSPQHNIARSGA*PMCSQL Trigger: GAGCTGGGAACACATGGGCAAGGCACCTGATCGAGC...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | TGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTGCTCGATCAGGTGCCTaGCCCATGTGTTCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CQDVTAHTFMGCQTSSQGARSGA*PMCSQL Trigger: GAGCTGGGAACACATGGGCAAGGCACCTGATCGAGC...ACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | AACCCAGGGTCTCCCAAAGCCTGGAGCGTGTGTGAGGCAGATAGTCAGTCTCTGCTGAAGCTGCCCTCTTaGTTGTTCTCCACACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPGSPKAWSVCEADSQSLLKLPS*LFSTQR Trigger: TCTCTGTGTGGAGAACAACAAAGAGGGCAGCTTCAG...CAGAGACTGACTATCTGCCTCACACACGCTCCAGGCTTTGGGAGACCCTGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 90 bp | GCCAGCATAGACATAAGACCGCTCAGCACAGGCATCCTGGCAGTGTaGCACGGTCATCTTTCTCAAGTCGTAAAACACTGCTCCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASIDIRPLSTGILAV*HGHLSQVVKHCSLQ Trigger: CTGAAGGGAGCAGTGTTTTACGACTTGAGAAAGATGACCGTGTCACACTGCCAGGATGCCTGTGCTGAGCGGTCTTATGTCTATGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGCCAGCGCATTTCCTGTaGAATTCAGCAACTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPGCHSTHIYGMSDKQSGPAHFL*NSATRD Trigger: GTCCCTAGTTGCTGAATTCAACAGGAAATGCGCTGG...CCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | GTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCTCGCTCACGGACACATaGAGGAAAGCCACCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCLCTSSPQCTTQINSVSSLTDT*RKATIS Trigger: GGAGATGGTGGCTTTCCTCAATGTGTCCGTGAGCGA...GGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGAAGCTGCCCTCTTTGTaGTTCTCCACACAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPGCHSTHIYGMSDKQSGKLPSL*FSTQRS Trigger: GCTTCTCTGTGTGGAGAACAACAAAGAGGGCAGCTT...CCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | CAGGATGTCACAGCACACACATTTATGGGATGTCAGACAAGCAGTCAGGGTCATTGGTCCTTCTCACCCTaGAACCCCTTGTTGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QDVTAHTFMGCQTSSQGHWSFSP*NPLLYR Trigger: CCTGTACAACAAGGGGTTCAAGGGTGAGAAGGACCA...ATGACCCTGACTGCTTGTCTGACATCCCATAAATGTGTGTGCTGTGACATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | CCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCCAGCACAATATCAAGCTGCCCTCTTTGTaGTTCTCCACACAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPVLSALLRSIVSPQHNIKLPSL*FSTQRS Trigger: GCTTCTCTGTGTGGAGAACAACAAAGAGGGCAGCTT...GATATTGTGCTGGGGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGGGTCATACAGTACCCATCAGCAACAGTCTGTCTATGTACCTCCAGTCCAAGCTGCCCTCTTTGTaGTTCTCCACACAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQGHTVPISNSLSMYLQSKLPSL*FSTQRS Trigger: GCTTCTCTGTGTGGAGAACAACAAAGAGGGCAGCTT...GGACTGGAGGTACATAGACAGACTGTTGCTGATGGGTACTGTATGACCCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | GTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCCCTGAAGCTGCCCTCTTaGTTGTTCTCCACACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VCLCTSSPQCTTQINSVSLKLPS*LFSTQR Trigger: TCTCTGTGTGGAGAACAACAAAGAGGGCAGCTTCAG...GGAGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | ACAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCCCAGCGCATTTCCTGTaGAATTCAGCAACTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVCLCTSSPQCTTQINSVPAHFL*NSATRD Trigger: GTCCCTAGTTGCTGAATTCAACAGGAAATGCGCTGG...GACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS-3UTR CAA 90 bp | CAGTCTGTCTATGTACCTCCAGTCCTCAGTGCACTACTCAGATCAATAGTGTCTCTGAAGCTGCCCTCTTaGTTGTTCTCCACACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSVYVPPVLSALLRSIVSLKLPS*LFSTQR Trigger: TCTCTGTGTGGAGAACAACAAAGAGGGCAGCTTCAG...AGACACTATTGATCTGAGTAGTGCACTGAGGACTGGAGGTACATAGACAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CCA 72 bp | CTCAGGGTGGGAGGCCCCTGCGGGTCACTGGTGAGGTaGTGGAGCCAACGCCGCCGCAGCGAGCTGCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRVGGPCGSLVR*WSQRRRSELRF Trigger: GAACCGCAGCTCGCTGCGGCGGCGTTGGCTCCACCACCTCACCAGTGACCCGCAGGGGCCTCCCACCCTGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS GCA 72 bp | TCTCAGGCAGTGGGAAGCACCCTCGGTAGGTGGCAGTaGGCCGCTTCTTGGAGCCTGGCTGCTGCAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQAVGSTLGRWQ*AASWSLAAAAP Trigger: TGGGGCTGCAGCAGCCAGGCTCCAAGAAGCGGCGCACTGCCACCTACCGAGGGTGCTTCCCACTGCCTGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 72 bp | GCCCCGCACATGGAGCCTTTCTCTCCCTTGCACTCCTaGTTGCACTCCTTCAGGCTGACACGTGTGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: APHMEPFSPLHS*LHSFRLTRVAG Trigger: GCCGGCCACACGTGTCAGCCTGAAGGAGTGCAATCAGGAGTGCAAGGGAGAGAAAGGCTCCATGTGCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 72 bp | AGGGCTCCTGGTCATGAGGGCGCCGGCCACGCCTCCTaGAGCTGCCCTCTTTGTTGTTCTCCACACAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RAPGHEGAGHAS*SCPLCCSPHRE Trigger: TTCTCTGTGTGGAGAACAACAAAGAGGGCAGCTTCAGGAGGCGTGGCCGGCGCCCTCATGACCAGGAGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CCA 72 bp | CGCTGTACACAGAGAGCCGGCGCACAGCCCCGCACATaGAGCCTTTCTCTCCCTTGCACTCCTGATTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RCTQRAGAQPRT*SLSLPCTPDCT Trigger: AGTGCAATCAGGAGTGCAAGGGAGAGAAAGGCTCCATGTGCGGGGCTGTGCGCCGGCTCTCTGTGTACAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CAA 72 bp | GTCGGGCAGGAACTTCCTGTCTGTGCACCGGGTGTCTaGCACGGGTGTCTGGTAGACCTCACAGTAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGQELPVCAPGV*HGCLVDLTVAR Trigger: CCTGGCTACTGTGAGGTCTACCAGACACCCGTGCAAGACACCCGGTGCACAGACAGGAAGTTCCTGCCCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 72 bp | CCACACAGAGAAGCCGCTCCTCGCTCACGGACACATTaGGGAAAGCCACCATCTCCCGAAGTGTGGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PHREAAPRSRTH*GKPPSPEVWAP Trigger: TGGTGCCCACACTTCGGGAGATGGTGGCTTTCCTCAATGTGTCCGTGAGCGAGGAGCGGCTTCTCTGTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS GCA 72 bp | GAGTCAAACATCTCAATCTCCCTCCGGCCACTCTCGTaGGTCTTCACACAGATGGTGCGCCGGCTCCGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ESNISISLRPLS*VFTQMVRRLRQ Trigger: TTGGCGGAGCCGGCGCACCATCTGTGTGAAGACGCACGAGAGTGGCCGGAGGGAGATTGAGATGTTTGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CCA 72 bp | GAAGCATCCCAGGTAATTGCCTCTATTATGGTTGGCTaGTCCAGAGGCCTCCGGACTCAGGGTGGGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EASQVIASIMVG*SRGLRTQGGRP Trigger: GGGCCTCCCACCCTGAGTCCGGAGGCCTCTGGACCAGCCAACCATAATAGAGGCAATTACCTGGGATGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CCA 72 bp | CAACTAGGGACCGGTAGGGGTTCCGGATCAGCAGGATaGCCGAGTCAAACATCTCAATCTCCCTCCGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLGTGRGSGSAG*PSQTSQSPSGH Trigger: GTGGCCGGAGGGAGATTGAGATGTTTGACTCGGCCATCCTGCTGATCCGGAACCCCTACCGGTCCCTAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CAA 90 bp | TTCCCAGCTCCAGGGAAGCTCGACAGAGCCACAAACACCTTAGACTaGTCGGGCAGGAACTTCCTGTCTGTGCACCGGGTGTCTTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: FPAPGKLDRATNTLD*SGRNFLSVHRVSCT Trigger: CGTGCAAGACACCCGGTGCACAGACAGGAAGTTCCTGCCCGACAAGTCTAAGGTGTTTGTGGCTCTGTCGAGCTTCCCTGGAGCTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 72 bp | TGGTGCGCCGGCTCCGCCAATGGTCCTTCTCACCCTTaGACCCCTTGTTGTACAGGGTTCCGTCGAAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: WCAGSANGPSHP*TPCCTGFRRSS Trigger: ACTACTTCGACGGAACCCTGTACAACAAGGGGTTCAAGGGTGAGAAGGACCATTGGCGGAGCCGGCGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS TCA 72 bp | CCTCATAGTGCACGACCAGCAGCCGCTTCCCATACTTaGGCCAGTCTAGGACATGTGAGGACCACCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHSARPAAASHT*ASLGHVRTTRR Trigger: CCTCCTGGTGGTCCTCACATGTCCTAGACTGGCTCAAGTATGGGAAGCGGCTGCTGGTCGTGCACTATGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS GCA 72 bp | ACGTGTGGCCGGCAGCCTATTCCCACAGTAGCACTCTaGACCAGCCTCCAAGCCAGCATAGACATAAGACCG | + |
|
Preference number: 6 (lower is better) Translates to: TCGRQPIPTVAL*TSLQASIDIRP Trigger: CGGTCTTATGTCTATGCTGGCTTGGAGGCTGGTGCAGAGTGCTACTGTGGGAATAGGCTGCCGGCCACACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS CCA 72 bp | GTCATGTTGGCCTGTGTCATGGAGGAGGAGAAGGTGTaGGTGACATTCTCAGGCAGTGGGAAGCACCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VMLACVMEEEKV*VTFSGSGKHPR Trigger: CCGAGGGTGCTTCCCACTGCCTGAGAATGTCACCCACACCTTCTCCTCCTCCATGACACAGGCCAACATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS CAA 72 bp | CCAGGGAAGCTCGACAGAGCCACAAACACCTTAGACTaGTCGGGCAGGAACTTCCTGTCTGTGCACCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGKLDRATNTLD*SGRNFLSVHRV Trigger: CACCCGGTGCACAGACAGGAAGTTCCTGCCCGACAAGTCTAAGGTGTTTGTGGCTCTGTCGAGCTTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS TCA 72 bp | CTGCTCCCTTCAGAGTTCTCTCCTGGCCCTCCTCACTaGAGCATCCCAGGTAATTGCCTCTATTATGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPSEFSPGPPH*SIPGNCLYYGW Trigger: CCAACCATAATAGAGGCAATTACCTGGGATGCTTCAGTGAGGAGGGCCAGGAGAGAACTCTGAAGGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS CCA 72 bp | TCCCAGCCTCGGAGGATGGCCAGAGGAAACTCTTTCTaGGAACAAAATCCAGAACACGTCTCCACAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQPRRMARGNSF*EQNPEHVSTVM Trigger: CATGACTGTGGAGACGTGTTCTGGATTTTGTTCCCAGAAAGAGTTTCCTCTGGCCATCCTCCGAGGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS TCA 72 bp | GACATAAGACCGCTCAGCACAGGCATCCTGGCAGTGTaGCACGGTCATCTTTCTCAAGTCGTAAAACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: DIRPLSTGILAV*HGHLSQVVKHC Trigger: GCAGTGTTTTACGACTTGAGAAAGATGACCGTGTCACACTGCCAGGATGCCTGTGCTGAGCGGTCTTATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
||
| CDS GCA 72 bp | TATTCACAAACTCCGGCCATTCTTTGCTCTTCCAATTaGGGTCAGGGGCATAGCCCAAGTGTCCAGCGCATT | + |
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Preference number: 6 (lower is better) Translates to: YSQTPAILCSSN*GQGHSPSVQRI Trigger: AATGCGCTGGACACTTGGGCTATGCCCCTGACCGCAATTGGAAGAGCAAAGAATGGCCGGAGTTTGTGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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| CDS CAA 90 bp | AACTCTTTCTGGGAACAAAATCCAGAACACGTCTCCACAGTCATGTaGGCCTGTGTCATGGAGGAGGAGAAGGTGTGGGTGACATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: NSFWEQNPEHVSTVM*ACVMEEEKVWVTFS Trigger: TGAGAATGTCACCCACACCTTCTCCTCCTCCATGACACAGGCCAACATGACTGTGGAGACGTGTTCTGGATTTTGTTCCCAGAAAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021168.14 ENSMUST00000108510.2 ENSMUST00000108511.8 |
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