Pregenerated sensors for WSB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029364Ensembl transcript IDs: ENSMUST00000031309.16, ENSMUST00000111959.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGAGTGTGGCTTGGCCGCCACCAGAGAGGCTCTGGAGCCCGCTTaGCTTTATTACCCCAGCAACATCCACAACTGCACTTGGCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: RECGLAATREALEPA*LYYPSNIHNCTWLQ Trigger: TTGAAGCCAAGTGCAGTTGTGGATGTTGCTGGGGTAATAAAGGCAAGCGGGCTCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR TCA 90 bp | TGCAACCACTGTTTACAGGAAACAAAAGCCGGCACTAGTGTATGGTaGGGAGCTCAGCCCAGTCCACGCGCAGCTGAGCAGGGAACCAAA | + |
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Preference number: 1 (lower is better) Translates to: CNHCLQETKAGTSVW*GAQPSPRAAEQGTK Trigger: TTTGGTTCCCTGCTCAGCTGCGCGTGGACTGGGCTGAGCTCCTCACCATACACTAGTGCCGGCTTTTGTTTCCTGTAAACAGTGGTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR TCA 90 bp | GCTCCACAACTGGGCCACTTAAGAACTCTGGTTCTTCGAGACAATTaGGAAAACACAGTTGTACCTTACTATCTGCTGAGAAAATACAAA | + |
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Preference number: 1 (lower is better) Translates to: APQLGHLRTLVLRDN*ENTVVPYYLLRKYK Trigger: TTTGTATTTTCTCAGCAGATAGTAAGGTACAACTGTGTTTTCTCAATTGTCTCGAAGAACCAGAGTTCTTAAGTGGCCCAGTTGTGGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR TCA 90 bp | TTCTTCGAGACAATTGAGAAAACACAGTTGTACCTTACTATCTGCTaGGAAAATACAAATAAATATGCTGATAAATGGCCATCTGACCGT | + |
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Preference number: 1 (lower is better) Translates to: FFETIEKTQLYLTIC*ENTNKYADKWPSDR Trigger: ACGGTCAGATGGCCATTTATCAGCATATTTATTTGTATTTTCTCAGCAGATAGTAAGGTACAACTGTGTTTTCTCAATTGTCTCGAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCCCCCTTGTACTGCTGCTaGTGCAGGAGGTGGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: EVRPAPQKWGHADLLAHAPLYCC*CRRWGS Trigger: GCTCCCCCACCTCCTGCAGCAGCAGCAGTACAAGGG...GGCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGCCGCCGCCAGTCCCTTGTACTaGTGCTGCTGCAGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: EMPYVAGTSQLRECGLAAASPLY*CCCRRW Trigger: CCACCTCCTGCAGCAGCAGCAGTACAAGGGACTGGC...GGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR-3UTR GCA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCGCCAGTCCCTTGTACTaGTGCTGCTGCAGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSASPLY*CCCRRW Trigger: CCACCTCCTGCAGCAGCAGCAGTACAAGGGACTGGC...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| 3UTR CAA 90 bp | AAGGGAGTGTGGCTTGGCCGCCACCAGAGAGGCTCTGGAGCCCGCTaGCCTTTATTACCCCAGCAACATCCACAACTGCACTTGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KGVWLGRHQRGSGAR*PLLPQQHPQLHLAS Trigger: TGAAGCCAAGTGCAGTTGTGGATGTTGCTGGGGTAATAAAGGCAAGCGGGCTCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR CAA 90 bp | GAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTaGGCCGCCACCAGAGAGGCTCTGGAGCCCGCTTGCCTTTATTAC | + |
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Preference number: 2 (lower is better) Translates to: EMPYVAGTSQLRECG*AATREALEPACLYY Trigger: GTAATAAAGGCAAGCGGGCTCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR-3UTR TCA 90 bp | TGCTACCGCTGTCAAAGAACGGTGCTTGGAAGGGGCTGTCTGTTTTGGGCAGTTGGAGGGTACATCCCATaGGGTCAAGCAGCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: CYRCQRTVLGRGCLFWAVGGYIP*GQAAET Trigger: TGTCTCTGCTGCTTGACCTCATGGGATGTACCCTCC...AACTGCCCAAAACAGACAGCCCCTTCCAAGCACCGTTCTTTGACAGCGGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR CAA 90 bp | CAGCACAAGCCAGTGATGTCAGCACTGACTCCACACGACTTAGACTaGGCTCCACAACTGGGCCACTTAAGAACTCTGGTTCTTCGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QHKPVMSALTPHDLD*APQLGHLRTLVLRD Trigger: GTCTCGAAGAACCAGAGTTCTTAAGTGGCCCAGTTGTGGAGCCAAGTCTAAGTCGTGTGGAGTCAGTGCTGACATCACTGGCTTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR-3UTR GCA 90 bp | CGGAGGAACTTCAAACCATGCAGCCGCTGGCTGGAAATAGGCAGCAGAAATGCCAGCAACATCCACAACTaGACTTGGCTTCAACACAAC | + |
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Preference number: 2 (lower is better) Translates to: RRNFKPCSRWLEIGSRNASNIHN*TWLQHN Trigger: GTTGTGTTGAAGCCAAGTGCAGTTGTGGATGTTGCT...GGCATTTCTGCTGCCTATTTCCAGCCAGCGGCTGCATGGTTTGAAGTTCCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR-3UTR GCA 90 bp | GCCTCATTTTGCATTGTTCTTCAAATAGAGGAGACTCCTCTATGCATACACTGTAGACCTACTTGCACATaGCATGGGAGGAAGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ASFCIVLQIEETPLCIHCRPTCT*HGRKEG Trigger: ACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCT...ACAGTGTATGCATAGAGGAGTCTCCTCTATTTGAAGAACAATGCAAAATGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR CAA 90 bp | GGCTCCACAACTGGGCCACTTAAGAACTCTGGTTCTTCGAGACAATaGAGAAAACACAGTTGTACCTTACTATCTGCTGAGAAAATACAA | + |
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Preference number: 2 (lower is better) Translates to: GSTTGPLKNSGSSRQ*RKHSCTLLSAEKIQ Trigger: TTGTATTTTCTCAGCAGATAGTAAGGTACAACTGTGTTTTCTCAATTGTCTCGAAGAACCAGAGTTCTTAAGTGGCCCAGTTGTGGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR CCA 72 bp | GCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTaGCTTGGCCGCCACCAGAGAGGCTCTGGAGCCCGC | + |
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Preference number: 3 (lower is better) Translates to: ALRGRYFPVKGV*LGRHQRGSGAR Trigger: GCGGGCTCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR GCA 72 bp | GCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTaGACATGCCATGGGAGGAAGGAAGGTCCACACTGG | + |
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Preference number: 3 (lower is better) Translates to: AGTTEVGSRRPT*TCHGRKEGPHW Trigger: CCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCTACCGCTGTCAAAGAACGGTGCTTGGAAGGGGCTGTCTGTTTTGGGCAATCCTAGCCAGTCCCTaGTACTGCTGCTGCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SCYRCQRTVLGRGCLFWAILASP*YCCCCR Trigger: CCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGAT...TGCCCAAAACAGACAGCCCCTTCCAAGCACCGTTCTTTGACAGCGGTAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR CCA 72 bp | AGAAGTGGGGTCACGCAGACCTACTTGCACATGCCATaGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RSGVTQTYLHMP*EEGRSTLVQCE Trigger: CTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCTGCGTGACCCCACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| 3UTR TCA 72 bp | TGTTTACAGGAAACAAAAGCCGGCACTAGTGTATGGTaGGGAGCTCAGCCCAGTCCACGCGCAGCTGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: CLQETKAGTSVW*GAQPSPRAAEQ Trigger: CTGCTCAGCTGCGCGTGGACTGGGCTGAGCTCCTCACCATACACTAGTGCCGGCTTTTGTTTCCTGTAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR CCA 72 bp | TGCTTGGAAGGGGCTGTCTGTTTTGGGCAGTTGAACTaGAGGGTACATCCCATGAGGTCAAGCAGCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: CLEGAVCFGQLN*RVHPMRSSSRD Trigger: GTCTCTGCTGCTTGACCTCATGGGATGTACCCTCCAGTTCAACTGCCCAAAACAGACAGCCCCTTCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR TCA 72 bp | CATCCACAACTGCACTTGGCTTCAACACAACTAGACTaGCGAAGGCTGCTCACCACGGATGAAGACGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: HPQLHLASTQLD*RRLLTTDEDEV Trigger: TACCTCGTCTTCATCCGTGGTGAGCAGCCTTCGTCAGTCTAGTTGTGTTGAAGCCAAGTGCAGTTGTGGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| 3UTR TCA 72 bp | CATCCCATGAGGTCAAGCAGCAGAGACAAACACATGTaGCAGACAGCACAAGCCAGTGATGTCAGCACTGAC | + |
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Preference number: 3 (lower is better) Translates to: HPMRSSSRDKHM*QTAQASDVSTD Trigger: GTCAGTGCTGACATCACTGGCTTGTGCTGTCTGTCACATGTGTTTGTCTCTGCTGCTTGACCTCATGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| CDS-3UTR TCA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCGGGGGCGCCCAGGCTTaGGTTCAGCCAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCGGAQA*VQPAAA Trigger: CGCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCC...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | GCACTAGTGTATGGTGAGGAGCTCAGCCCAGTCCACGCGCAGCTGAGCAGGGAAGAGAGGGCCATGGGCTaGAGGCCAGCCCCCACACAA | + |
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Preference number: 4 (lower is better) Translates to: ALVYGEELSPVHAQLSREERAMG*RPAPTQ Trigger: TTGTGTGGGGGCTGGCCTTCAGCCCATGGCCCTCTC...TTCCCTGCTCAGCTGCGCGTGGACTGGGCTGAGCTCCTCACCATACACTAGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| CDS-3UTR TCA 90 bp | GGCAGCAGAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGGGGCGCCCAGGCTTaGGTTCAGCCAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GSRNALRGRYFPVKGVWLGGAQA*VQPAAA Trigger: CGCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCC...AAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTCTGCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| CDS-3UTR TCA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCGCCAGGGGACCAGCTTaGCCACGCAGTGTCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCARGPA*PRSVLE Trigger: CTCAAGGACACTGCGTGGTCAAGCTGGTCCCCTGGC...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCGAGAGGGCCATGGGCTaGAGGCCAGCCCCCACACAA | + |
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Preference number: 4 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSERAMG*RPAPTQ Trigger: TTGTGTGGGGGCTGGCCTTCAGCCCATGGCCCTCTC...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | TGTGAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGGGCGCCTGGGGATGGTaGCGTGCCCAGAGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: CELPDSILASPLYCCCCRGAWGW*RAQSFL Trigger: CAGGAAACTCTGGGCACGTCACCATCCCCAGGCGCC...CCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| 3UTR CAA 72 bp | TACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTaGGCCGCCACCAGAGAGGCTCTGGAGCCCGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: YVAGTSQLRECG*AATREALEPAC Trigger: GCAAGCGGGCTCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| CDS-3UTR GCA 90 bp | GAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGAGGGTGCCCAGAGTTTCCTaGTGGGTGGAGAGGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: ELPDSILASPLYCCCCRRVPRVS*WVERAM Trigger: CATGGCCCTCTCCACCCAGCAGGAAACTCTGGGCAC...CCTCCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR CCA 90 bp | CACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACGACTTCCAGTCGAACTaGTGGGGGCGCCCAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HMPWEEGRSTLVQCELPDDFQSN*WGRPGL Trigger: CAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTC...GTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR CCA 90 bp | TGTGAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGGACTTCCAGTCGAACTaGTGGGGGCGCCCAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: CELPDSILASPLYCCCCRDFQSN*WGRPGL Trigger: CAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTC...CCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCAGAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGGTGGAGAGGGCCATaGGCTGAAGGCCAGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSRNALRGRYFPVKGVWLGWRGP*AEGQPP Trigger: TGGGGGCTGGCCTTCAGCCCATGGCCCTCTCCACCC...AAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTCTGCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| 3UTR CAA 72 bp | GGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTaGCACATGCCATGGGAGGAAGGAAGGTCCACACTG | + |
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Preference number: 4 (lower is better) Translates to: GRHHRSGVTQTY*HMPWEEGRSTL Trigger: CAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | CCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCCAGAGCCCAGATCCTaGGCAGCCTGTCATCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PWEEGRSTLVQCELPDSIPEPRS*AACHLP Trigger: TGGCAGATGACAGGCTGCTCAGGATCTGGGCTCTGG...GATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR GCA 90 bp | GAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGCCGCCCTGGGGATGGTGACGTaGCCAGAGTTTCCTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EMPYVAGTSQLRECGLAALGMVT*PEFPAG Trigger: CCCAGCAGGAAACTCTGGGCACGTCACCATCCCCAG...GGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| CDS-3UTR CCA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCAGCCCCCACACAATCTaGCCACAGTCCAGCGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCSPHTI*PQSSVF Trigger: GAAGACGCTGGACTGTGGCCAGATTGTGTGGGGGCT...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | CACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACACCACGCAGTGTCCTTaGGACCAGGCGAACCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HMPWEEGRSTLVQCELPDTTQCP*DQANQE Trigger: TTCCTGGTTCGCCTGGTCTCAAGGACACTGCGTGGT...GTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | CCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCACCACGCAGTGTCCTTaGGACCAGGCGAACCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PWEEGRSTLVQCELPDSITTQCP*DQANQE Trigger: TTCCTGGTTCGCCTGGTCTCAAGGACACTGCGTGGT...GATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR GCA 90 bp | GAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCCCGACTTCTCCCCAGCTaGAGAGCACAGCATGCTACA | + |
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Preference number: 4 (lower is better) Translates to: EVRPAPQKWGHADLLAHARLLPS*RAQHAT Trigger: TGTAGCATGCTGTGCTCTGCAGCTGGGGAGAAGTCG...GGCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR CCA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCGTCCAGAACTGGACATaGCCATCTCTCGTCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCVQNWT*PSLVPV Trigger: CACAGGGACGAGAGATGGCCATGTCCAGTTCTGGAC...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR CCA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCGGAGCTGTCCAGAACTaGACATGGCCATCTCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCGAVQN*TWPSLV Trigger: GACGAGAGATGGCCATGTCCAGTTCTGGACAGCTCC...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | TGGCTGGAAATAGGCAGCAGAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGCGCCTGGGGATGGTaGCGTGCCCAGAGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WLEIGSRNALRGRYFPVKGAWGW*RAQSFL Trigger: CAGGAAACTCTGGGCACGTCACCATCCCCAGGCGCC...CTTAACTGGGAAGTACCTGCCACGTAGGGCATTTCTGCTGCCTATTTCCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| CDS-3UTR GCA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCCGACTTCTCCCCAGCTaGAGAGCACAGCATGCTACA | + |
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Preference number: 4 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSRLLPS*RAQHAT Trigger: TGTAGCATGCTGTGCTCTGCAGCTGGGGAGAAGTCG...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS-3UTR TCA 90 bp | GAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGCCGCCATACAAGCCTTCAGGTaGGAAGCACACGGACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EMPYVAGTSQLRECGLAAIQAFR*EAHGPQ Trigger: CTGAGGTCCGTGTGCTTCTCACCTGAAGGCTTGTAT...GGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
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| CDS-3UTR TCA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCATACAAGCCTTCAGGTaGGAAGCACACGGACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSIQAFR*EAHGPQ Trigger: CTGAGGTCCGTGTGCTTCTCACCTGAAGGCTTGTAT...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | ACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCTGCAGAGCACAGCATaGTACAGTCAGGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TCHGRKEGPHWSSVSCLTLQSTA*YSQGRW Trigger: CCATCTCCCCTGACTGTAGCATGCTGTGCTCTGCAG...AGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCCGGCACTAGTGTATGGTGAGGAGCTCAGCCCAGTCCACGCGCAGCTGGCTTTCCTGCATAAGTaGTTCAGTGAGGACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: QKPALVYGEELSPVHAQLAFLHK*FSEDRT Trigger: GGTCCTGTCCTCACTGAAGCACTTATGCAGGAAAGC...CAGCTGCGCGTGGACTGGGCTGAGCTCCTCACCATACACTAGTGCCGGCTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CCA 90 bp | CCAGTGATGTCAGCACTGACTCCACACGACTTAGACTTGGCTCCACAACTGGGCAGCCCCCACACAATCTaGCCACAGTCCAGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVMSALTPHDLDLAPQLGSPHTI*PQSSVF Trigger: GAAGACGCTGGACTGTGGCCAGATTGTGTGGGGGCT...GCCCAGTTGTGGAGCCAAGTCTAAGTCGTGTGGAGTCAGTGCTGACATCACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CCA 90 bp | GCACTAGTGTATGGTGAGGAGCTCAGCCCAGTCCACGCGCAGCTGAGCAGGGAACTCACGACGTCTTGGTaGCCAGAAAGATTCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVYGEELSPVHAQLSRELTTSW*PERFRS Trigger: GCTTCTGAATCTTTCTGGCCACCAAGACGTCGTGAG...TTCCCTGCTCAGCTGCGCGTGGACTGGGCTGAGCTCCTCACCATACACTAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCCGAGACAACACTGCTTTaGTGGCCTTCTAGTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EVRPAPQKWGHADLLAHAETTLL*WPSSFR Trigger: CCGGAAACTAGAAGGCCACCAAAGCAGTGTTGTCTC...GGCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCGAGACAACACTGCTTTaGTGGCCTTCTAGTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCETTLL*WPSSFR Trigger: CCGGAAACTAGAAGGCCACCAAAGCAGTGTTGTCTC...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCCTCAGGGAGCTCATGTaGACGTCACTGTCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSLRELM*TSLSSM Trigger: CATGGATGACAGTGACGTCCACATGAGCTCCCTGAG...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | ACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTGTCCAGAACTGGACATaGCCATCTCTCGTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCHGRKEGPHWSSVSCLTVQNWT*PSLVPV Trigger: CACAGGGACGAGAGATGGCCATGTCCAGTTCTGGAC...AGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGAGCTCAGCCCAGTCCACGCGCAGCTGAGCAGGGAACCAAACACCAGATGTGACAAGCAAGGCTaGATCAGGAGAGAAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: GEELSPVHAQLSREPNTRCDKQG*IRREIT Trigger: TGTGATTTCTCTCCTGATTCAGCCTTGCTTGTCACA...TCTGGTGTTTGGTTCCCTGCTCAGCTGCGCGTGGACTGGGCTGAGCTCCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGAGGTGTCATACGAAGCTGTaGCAAGCAAGGCTGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELPDSILASPLYCCCCRRCHTKL*QARLNQ Trigger: CTGATTCAGCCTTGCTTGTCACAGCTTCGTATGACA...CCTCCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | CCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCTCTTCTCCTTCAGACTaGCCCGTCCTTTTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PWEEGRSTLVQCELPDSISSPSD*PVLLGH Trigger: ATGACCCAAAAGGACGGGGCAGTCTGAAGGAGAAGA...GATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCTCTTCTCCTTCAGACTaGCCCGTCCTTTTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSSSPSD*PVLLGH Trigger: ATGACCCAAAAGGACGGGGCAGTCTGAAGGAGAAGA...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCAGAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTCTGCAGAGCACAGCATaGTACAGTCAGGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRNALRGRYFPVKGVWLLQSTA*YSQGRW Trigger: CCATCTCCCCTGACTGTAGCATGCTGTGCTCTGCAG...AAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTCTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGGCTTTCCTGCATAAGTaGTTCAGTGAGGACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CELPDSILASPLYCCCCRAFLHK*FSEDRT Trigger: GGTCCTGTCCTCACTGAAGCACTTATGCAGGAAAGC...CCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | CACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACCTCACGACGTCTTGGTaGCCAGAAAGATTCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HMPWEEGRSTLVQCELPDLTTSW*PERFRS Trigger: GCTTCTGAATCTTTCTGGCCACCAAGACGTCGTGAG...GTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCCGTCACTGTCATCCATaGTGGGTTCAAGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSRHCHP*WVQAVC Trigger: ACACACAGCTTGAACCCACCATGGATGACAGTGACG...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| 3UTR CAA 72 bp | GAACGGTGCTTGGAAGGGGCTGTCTGTTTTGGGCAGTaGAACTGGAGGGTACATCCCATGAGGTCAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERCLEGAVCFGQ*NWRVHPMRSSS Trigger: GCTGCTTGACCTCATGGGATGTACCCTCCAGTTCAACTGCCCAAAACAGACAGCCCCTTCCAAGCACCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGAGGTGGTGTGACAAGCAAGGCTaGATCAGGAGAGAAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPDSILASPLYCCCCRRWCDKQG*IRREIT Trigger: TGTGATTTCTCTCCTGATTCAGCCTTGCTTGTCACA...CCACCTCCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR TCA 90 bp | AGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGCCGCCACCAGAGAGGCTCTGGAGGCAGTGCTAGGACTTaGTACGTTGTCAGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RYFPVKGVWLGRHQRGSGGSART*YVVRKL Trigger: AAGTTTCCTGACAACGTATCAAGTCCTAGCACTGCC...TCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR GCA 90 bp | CACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCCAAATCTTGATCTaGCCATCGTTGAGACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HMPWEEGRSTLVQCELPDSQILI*PSLRPV Trigger: CACAGGTCTCAACGATGGGCAGATCAAGATTTGGGA...GTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGCACAGGAGACAACACTaGTTTGGTGGCCTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CELPDSILASPLYCCCCRHRRQH*FGGLLV Trigger: AACTAGAAGGCCACCAAAGCAGTGTTGTCTCCTGTG...CCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | ACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTTTCGGAGGGCTTTCCTaGATAAGTGCTTCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCHGRKEGPHWSSVSCLTFGGLS*ISASVR Trigger: CCTCACTGAAGCACTTATGCAGGAAAGCCCTCCGAA...AGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGCCGCCACCAGAGAGGCTCTGGATCTCTCACGACGTCTTaGTGGCCAGAAAGATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RYFPVKGVWLGRHQRGSGSLTTS*WPERFR Trigger: TCTGAATCTTTCTGGCCACCAAGACGTCGTGAGAGA...TCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCCACAACACTGCTTTGGTaGCCTTCTAGTTTCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EVRPAPQKWGHADLLAHATTLLW*PSSFRI Trigger: AATCCGGAAACTAGAAGGCCACCAAAGCAGTGTTGT...GGCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCAGAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTCTCAGGGAGCTCATGTaGACGTCACTGTCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSRNALRGRYFPVKGVWLLRELM*TSLSSM Trigger: CATGGATGACAGTGACGTCCACATGAGCTCCCTGAG...AAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTCTGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR TCA 90 bp | ACTTGCACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCGGCAGTGCTAGGACTTaGTACGTTGTCAGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TCTCHGRKEGPHWSSVSCGSART*YVVRKL Trigger: AAGTTTCCTGACAACGTATCAAGTCCTAGCACTGCC...GCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGCCGCCACCAGAGAGGCTCTGGAACAACACTGCTTTGGTaGCCTTCTAGTTTCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RYFPVKGVWLGRHQRGSGTTLLW*PSSFRI Trigger: AATCCGGAAACTAGAAGGCCACCAAAGCAGTGTTGT...TCCAGAGCCTCTCTGGTGGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR TCA 90 bp | CCAGTGATGTCAGCACTGACTCCACACGACTTAGACTTGGCTCCACAACTGGGCTGTCATACGAAGCTGTaGCAAGCAAGGCTGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVMSALTPHDLDLAPQLGCHTKL*QARLNQ Trigger: CTGATTCAGCCTTGCTTGTCACAGCTTCGTATGACA...GCCCAGTTGTGGAGCCAAGTCTAAGTCGTGTGGAGTCAGTGCTGACATCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR GCA 90 bp | GGCAGCAGAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTCACAGGAGACAACACTaGTTTGGTGGCCTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRNALRGRYFPVKGVWLHRRQH*FGGLLV Trigger: AACTAGAAGGCCACCAAAGCAGTGTTGTCTCCTGTG...AAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTCTGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CCA 90 bp | CAGACCTACTTGCACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTTCTCTCACGACGTCTTaGTGGCCAGAAAGATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTYLHMPWEEGRSTLVQCSLTTS*WPERFR Trigger: TCTGAATCTTTCTGGCCACCAAGACGTCGTGAGAGA...ACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | GATGTCAGCACTGACTCCACACGACTTAGACTTGGCTCCACAACTGGGCCACTTCGTCACTGTCATCCATaGTGGGTTCAAGCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVSTDSTRLRLGSTTGPLRHCHP*WVQAVC Trigger: ACACACAGCTTGAACCCACCATGGATGACAGTGACG...AAGTGGCCCAGTTGTGGAGCCAAGTCTAAGTCGTGTGGAGTCAGTGCTGACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CCA 90 bp | ACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTACTCTTTCATCTTCTTaGGGATTGGCAGTGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCHGRKEGPHWSSVSCLTTLSSS*GLAVLG Trigger: TCCTAGCACTGCCAATCCCCAAGAAGATGAAAGAGT...AGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCTATGTCTTATCCCGGGATaGAGAGACCAAAATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: WEEGRSTLVQCELPDSILCLIPG*RDQNQT Trigger: AGTTTGATTTTGGTCTCTGCATCCCGGGATAAGACA...TAGGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGGAACTTCAAACCATGCAGCCGCTGGCTGGAAATAGGCAGCAGAAATGCCACTCTTTCATCTTCTTaGGGATTGGCAGTGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRNFKPCSRWLEIGSRNATLSSS*GLAVLG Trigger: TCCTAGCACTGCCAATCCCCAAGAAGATGAAAGAGT...GGCATTTCTGCTGCCTATTTCCAGCCAGCGGCTGCATGGTTTGAAGTTCCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| 3UTR CAA 72 bp | CCAGTGATGTCAGCACTGACTCCACACGACTTAGACTaGGCTCCACAACTGGGCCACTTAAGAACTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVMSALTPHDLD*APQLGHLRTLV Trigger: AACCAGAGTTCTTAAGTGGCCCAGTTGTGGAGCCAAGTCTAAGTCGTGTGGAGTCAGTGCTGACATCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR TCA 90 bp | ACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTAGAAAGTCCTGTATGTaGGGAACTCTTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCHGRKEGPHWSSVSCLTRKSCM*GTLSSS Trigger: AGAAGATGAAAGAGTTCCTCACATACAGGACTTTCT...AGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCACTTAAGAACTCTGGTTCTTCGAGACAATTGAGAAAACACAGTTGTGTGCCCAGAGTTTCCTaGTGGGTGGAGAGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TGPLKNSGSSRQLRKHSCVPRVS*WVERAM Trigger: CATGGCCCTCTCCACCCAGCAGGAAACTCTGGGCAC...ACAACTGTGTTTTCTCAATTGTCTCGAAGAACCAGAGTTCTTAAGTGGCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR GCA 90 bp | CCAGTGATGTCAGCACTGACTCCACACGACTTAGACTTGGCTCCACAACTGGGCTGTCTTATCCCGGGATaGAGAGACCAAAATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PVMSALTPHDLDLAPQLGCLIPG*RDQNQT Trigger: AGTTTGATTTTGGTCTCTGCATCCCGGGATAAGACA...GCCCAGTTGTGGAGCCAAGTCTAAGTCGTGTGGAGTCAGTGCTGACATCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR TCA 90 bp | GCCTCATTTTGCATTGTTCTTCAAATAGAGGAGACTCCTCTATGCATACACTGTCCAGAGCCCAGATCCTaGGCAGCCTGTCATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASFCIVLQIEETPLCIHCPEPRS*AACHLP Trigger: TGGCAGATGACAGGCTGCTCAGGATCTGGGCTCTGG...ACAGTGTATGCATAGAGGAGTCTCCTCTATTTGAAGAACAATGCAAAATGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR TCA 90 bp | CAGACCTACTTGCACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTAGAAAGTCCTGTATGTaGGGAACTCTTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTYLHMPWEEGRSTLVQCRKSCM*GTLSSS Trigger: AGAAGATGAAAGAGTTCCTCACATACAGGACTTTCT...ACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGACTCCTCTATGCATACACTGTACAATGTTAACACTGCCTCCATAAAGGGAGCTGTCCAGAACTaGACATGGCCATCTCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGDSSMHTLYNVNTASIKGAVQN*TWPSLV Trigger: GACGAGAGATGGCCATGTCCAGTTCTGGACAGCTCC...CTTTATGGAGGCAGTGTTAACATTGTACAGTGTATGCATAGAGGAGTCTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCACTTAAGAACTCTGGTTCTTCGAGACAATTGAGAAAACACAGTTGTTTCGGAGGGCTTTCCTaGATAAGTGCTTCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGPLKNSGSSRQLRKHSCFGGLS*ISASVR Trigger: CCTCACTGAAGCACTTATGCAGGAAAGCCCTCCGAA...ACAACTGTGTTTTCTCAATTGTCTCGAAGAACCAGAGTTCTTAAGTGGCCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR GCA 90 bp | GCCTCATTTTGCATTGTTCTTCAAATAGAGGAGACTCCTCTATGCATACACTGTTCCCAAATCTTGATCTaGCCATCGTTGAGACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASFCIVLQIEETPLCIHCSQILI*PSLRPV Trigger: CACAGGTCTCAACGATGGGCAGATCAAGATTTGGGA...ACAGTGTATGCATAGAGGAGTCTCCTCTATTTGAAGAACAATGCAAAATGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS CCA 90 bp | GAGAAGGCCACGCTCCAGGTCTCACAGCTTGACTTCCAGTCGAACTaGTGGGGGCGCCCAGGCTTGAGTTCAGCCAGCAGCAGCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKATLQVSQLDFQSN*WGRPGLSSASSSGS Trigger: GGAGCCGCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGAGCGTGGCCTTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | GGGATGGTGACGTGCCCAGAGTTTCCTGCTGGGTGGAGAGGGCCATaGGCTGAAGGCCAGCCCCCACACAATCTGGCCACAGTCCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GMVTCPEFPAGWRGP*AEGQPPHNLATVQR Trigger: ACGCTGGACTGTGGCCAGATTGTGTGGGGGCTGGCCTTCAGCCCATGGCCCTCTCCACCCAGCAGGAAACTCTGGGCACGTCACCATCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGAGGTGGGGGCGCCCAGGCTaGAGTTCAGCCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELPDSILASPLYCCCCRRWGRPG*SSASSS Trigger: GCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCA...CCTCCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS TCA 90 bp | CCAGGAACCGTCTGGCGAGAAGGCCACGCTCCAGGTCTCACAGCTTaGCTTCCAGTCGAACTGGTGGGGGCGCCCAGGCTTGAGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTVWREGHAPGLTA*LPVELVGAPRLEFS Trigger: GCTGAACTCAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGAGCGTGGCCTTCTCGCCAGACGGTTCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | AAGGCCACGCTCCAGGTCTCACAGCTTGACTTCCAGTCGAACTGGTaGGGGCGCCCAGGCTTGAGTTCAGCCAGCAGCAGCGGCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KATLQVSQLDFQSNW*GRPGLSSASSSGSS Trigger: AGAGGAGCCGCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGAGCGTGGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS TCA 90 bp | TGTTCCTCTAAGGGCCAGGGGACCAGCTTGACCACGCAGTGTCCTTaGGACCAGGCGAACCAGGAACCGTCTGGCGAGAAGGCCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSKGQGTSLTTQCP*DQANQEPSGEKATL Trigger: GAGCGTGGCCTTCTCGCCAGACGGTTCCTGGTTCGCCTGGTCTCAAGGACACTGCGTGGTCAAGCTGGTCCCCTGGCCCTTAGAGGAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | CTGGGTGGAGAGGGCCATGGGCTGAAGGCCAGCCCCCACACAATCTaGCCACAGTCCAGCGTCTTCTCCTTCAGACTGCCCCGTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGGEGHGLKASPHTI*PQSSVFSFRLPRPF Trigger: AAAAGGACGGGGCAGTCTGAAGGAGAAGACGCTGGACTGTGGCCAGATTGTGTGGGGGCTGGCCTTCAGCCCATGGCCCTCTCCACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS TCA 90 bp | TCTCACAGCTTGACTTCCAGTCGAACTGGTGGGGGCGCCCAGGCTTaGGTTCAGCCAGCAGCAGCGGCTCCTCTGGGGAAGGAGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SHSLTSSRTGGGAQA*VQPAAAAPLGKERS Trigger: TGATCTCTCCTTCCCCAGAGGAGCCGCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | CGGAGGAACTTCAAACCATGCAGCCGCTGGCTGGAAATAGGCAGCAGAAATGCCTGGGGGCGCCCAGGCTaGAGTTCAGCCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRNFKPCSRWLEIGSRNAWGRPG*SSASSS Trigger: GCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCA...GGCATTTCTGCTGCCTATTTCCAGCCAGCGGCTGCATGGTTTGAAGTTCCTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CAA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCTTGATCTGCCCATCGTaGAGACCTGTGGCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCLICPS*RPVARI Trigger: GATCCTGGCCACAGGTCTCAACGATGGGCAGATCAA...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS TCA 90 bp | GAGCAGCCTGTCATCTGCCACCGTAGCGAGATACAAGCCTTCAGGTaGGAAGCACACGGACCTCAGGGAGCTCATGTGGACGTCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EQPVICHRSEIQAFR*EAHGPQGAHVDVTV Trigger: GACAGTGACGTCCACATGAGCTCCCTGAGGTCCGTGTGCTTCTCACCTGAAGGCTTGTATCTCGCTACGGTGGCAGATGACAGGCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS GCA 90 bp | GCCCCCACACAATCTGGCCACAGTCCAGCGTCTTCTCCTTCAGACTaGCCCGTCCTTTTGGGTCATTCTTGCTGCTTCGGCTCTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APTQSGHSPASSPSD*PVLLGHSCCFGSWL Trigger: AAGCCAAGAGCCGAAGCAGCAAGAATGACCCAAAAGGACGGGGCAGTCTGAAGGAGAAGACGCTGGACTGTGGCCAGATTGTGTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | TGCTTCAGTGAGGACAGGACCCGGGGAGCTGTCCAGAACTGGACATaGCCATCTCTCGTCCCTGTGGCAATAATTCCACCGTGTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFSEDRTRGAVQNWT*PSLVPVAIIPPCGK Trigger: CTTCCCACACGGTGGAATTATTGCCACAGGGACGAGAGATGGCCATGTCCAGTTCTGGACAGCTCCCCGGGTCCTGTCCTCACTGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS GCA 90 bp | TGTGTAGGACCGCATGCTCCACAGAAAGACCGACTTCTCCCCAGCTaGAGAGCACAGCATGCTACAGTCAGGGGAGATGGAGCAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CVGPHAPQKDRLLPS*RAQHATVRGDGAAV Trigger: TACTGCTGCTCCATCTCCCCTGACTGTAGCATGCTGTGCTCTGCAGCTGGGGAGAAGTCGGTCTTTCTGTGGAGCATGCGGTCCTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | AGCACACGGACCTCAGGGAGCTCATGTGGACGTCACTGTCATCCATaGTGGGTTCAAGCTGTGTGTGATGAAGTGACCTCAGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: STRTSGSSCGRHCHP*WVQAVCDEVTSASR Trigger: GCGAGAGGCTGAGGTCACTTCATCACACACAGCTTGAACCCACCATGGATGACAGTGACGTCCACATGAGCTCCCTGAGGTCCGTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGTCCAGGTCTCACAGCTaGACTTCCAGTCGAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CELPDSILASPLYCCCCRSRSHS*TSSRTG Trigger: ACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGA...CCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCTATTGATCTGCCCATCGTaGAGACCTGTGGCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: WEEGRSTLVQCELPDSILLICPS*RPVARI Trigger: GATCCTGGCCACAGGTCTCAACGATGGGCAGATCAA...TAGGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGGTGCAGCAAAGACCATaGGTCATCGGAGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CELPDSILASPLYCCCCRVQQRP*VIGAKA Trigger: TGCCTTTGCTCCGATGACCAATGGTCTTTGCTGCAC...CCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAGCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS GCA 90 bp | TGCTCCACAGAAAGACCGACTTCTCCCCAGCTGCAGAGCACAGCATaGTACAGTCAGGGGAGATGGAGCAGCAGTAAACCCACTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CSTERPTSPQLQSTA*YSQGRWSSSKPTAD Trigger: ATCTGCAGTGGGTTTACTGCTGCTCCATCTCCCCTGACTGTAGCATGCTGTGCTCTGCAGCTGGGGAGAAGTCGGTCTTTCTGTGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | CTGGCCACAGTCCAGCGTCTTCTCCTTCAGACTGCCCCGTCCTTTTaGGTCATTCTTGCTGCTTCGGCTCTTGGCTTCGAATCCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LATVQRLLLQTAPSF*VILAASALGFESFR Trigger: CCTAAAGGATTCGAAGCCAAGAGCCGAAGCAGCAAGAATGACCCAAAAGGACGGGGCAGTCTGAAGGAGAAGACGCTGGACTGTGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | CATAAGTGCTTCAGTGAGGACAGGACCCGGGGAGCTGTCCAGAACTaGACATGGCCATCTCTCGTCCCTGTGGCAATAATTCCACCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HKCFSEDRTRGAVQN*TWPSLVPVAIIPPC Trigger: ACACGGTGGAATTATTGCCACAGGGACGAGAGATGGCCATGTCCAGTTCTGGACAGCTCCCCGGGTCCTGTCCTCACTGAAGCACTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCCGGCACTAGTGTATGGTGAGGAGCTCAGCCCAGTCCACGCGCAGCTGTGTACCTCCCAAATCTaGATCTGCCCATCGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKPALVYGEELSPVHAQLCTSQI*ICPSLR Trigger: TCTCAACGATGGGCAGATCAAGATTTGGGAGGTACA...CAGCTGCGCGTGGACTGGGCTGAGCTCCTCACCATACACTAGTGCCGGCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CAA 90 bp | CGAGGTAAGGCCGGCACCACAGAAGTGGGGTCACGCAGACCTACTTGCACATGCTGTACCTCCCAAATCTaGATCTGCCCATCGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGKAGTTEVGSRRPTCTCCTSQI*ICPSLR Trigger: TCTCAACGATGGGCAGATCAAGATTTGGGAGGTACA...GCATGTGCAAGTAGGTCTGCGTGACCCCACTTCTGTGGTGCCGGCCTTACCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | CATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCATCTCTCACGACGTCTaGGTGGCCAGAAAGATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGRKEGPHWSSVSCLTPSISHDV*VARKIQ Trigger: CTGAATCTTTCTGGCCACCAAGACGTCGTGAGAGAT...GGATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | CCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCATCTCTCACGACGTCTaGGTGGCCAGAAAGATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PWEEGRSTLVQCELPDSIISHDV*VARKIQ Trigger: CTGAATCTTTCTGGCCACCAAGACGTCGTGAGAGAT...GATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCGTGCAGCAAAGACCATaGGTCATCGGAGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TCTCHGRKEGPHWSSVSCVQQRP*VIGAKA Trigger: TGCCTTTGCTCCGATGACCAATGGTCTTTGCTGCAC...GCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | CCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTGAGCTGCCTGACTCCATCCTAGGACTTGATACGTaGTCAGGAAACTTCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PWEEGRSTLVQCELPDSILGLDT*SGNFGG Trigger: CCCTCCGAAGTTTCCTGACAACGTATCAAGTCCTAG...GATGGAGTCAGGCAGCTCACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCCGGCACTAGTGTATGGTGAGGAGCTCAGCCCAGTCCACGCGCAGCTGTCATCTTCTTGGGGATaGGCAGTGCTAGGACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKPALVYGEELSPVHAQLSSSWG*AVLGLD Trigger: ATCAAGTCCTAGCACTGCCAATCCCCAAGAAGATGA...CAGCTGCGCGTGGACTGGGCTGAGCTCCTCACCATACACTAGTGCCGGCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGACTCCATCCTAGCCAGTCCCTTGTACTGCTGCTGCTGCAGGAGGTGGAACTCTTTCATCTTCTaGGGGATTGGCAGTGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPDSILASPLYCCCCRRWNSFIF*GIGSAR Trigger: CCTAGCACTGCCAATCCCCAAGAAGATGAAAGAGTT...CCACCTCCTGCAGCAGCAGCAGTACAAGGGACTGGCTAGGATGGAGTCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS GCA 90 bp | GTGCTAGGACTTGATACGTTGTCAGGAAACTTCGGAGGGCTTTCCTaGATAAGTGCTTCAGTGAGGACAGGACCCGGGGAGCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLGLDTLSGNFGGLS*ISASVRTGPGELSR Trigger: TCTGGACAGCTCCCCGGGTCCTGTCCTCACTGAAGCACTTATGCAGGAAAGCCCTCCGAAGTTTCCTGACAACGTATCAAGTCCTAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 90 bp | CTGGACATGGCCATCTCTCGTCCCTGTGGCAATAATTCCACCGTGTaGGAAGAACGTGCAGCAAAGACCATTGGTCATCGGAGCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDMAISRPCGNNSTV*EERAAKTIGHRSKG Trigger: GCCTTTGCTCCGATGACCAATGGTCTTTGCTGCACGTTCTTCCCACACGGTGGAATTATTGCCACAGGGACGAGAGATGGCCATGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGGGAGTGTGGCTTGGCCGCCAACTCTTTCATCTTCTaGGGGATTGGCAGTGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: EMPYVAGTSQLRECGLAANSFIF*GIGSAR Trigger: CCTAGCACTGCCAATCCCCAAGAAGATGAAAGAGTT...GGCGGCCAAGCCACACTCCCTTAACTGGGAAGTACCTGCCACGTAGGGCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CAA 90 bp | CAGACCTACTTGCACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTCTAGGACTTGATACGTaGTCAGGAAACTTCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTYLHMPWEEGRSTLVQCLGLDT*SGNFGG Trigger: CCCTCCGAAGTTTCCTGACAACGTATCAAGTCCTAG...ACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGAAATAGGCAGCAGAAATGCCCTACGTGGCAGGTACTTCCCAGTTAAGTCCAGGTCTCACAGCTaGACTTCCAGTCGAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WLEIGSRNALRGRYFPVKSRSHS*TSSRTG Trigger: ACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGA...CTTAACTGGGAAGTACCTGCCACGTAGGGCATTTCTGCTGCCTATTTCCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS-3UTR CAA 90 bp | CAGACCTACTTGCACATGCCATGGGAGGAAGGAAGGTCCACACTGGTCCAGTGTTCATCTTCTTGGGGATaGGCAGTGCTAGGACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QTYLHMPWEEGRSTLVQCSSSWG*AVLGLD Trigger: ATCAAGTCCTAGCACTGCCAATCCCCAAGAAGATGA...ACACTGGACCAGTGTGGACCTTCCTTCCTCCCATGGCATGTGCAAGTAGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGGCCACTTAAGAACTCTGGTTCTTCGAGACAATTGAGAAAACACAGTTGTGACCACGCAGTGTCCTaGAGACCAGGCGAACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGPLKNSGSSRQLRKHSCDHAVS*RPGEPG Trigger: TCCTGGTTCGCCTGGTCTCAAGGACACTGCGTGGTC...ACAACTGTGTTTTCTCAATTGTCTCGAAGAACCAGAGTTCTTAAGTGGCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031309.16 |
||
| CDS TCA 90 bp | GTGAGGAACTCTTTCATCTTCTTGGGGATTGGCAGTGCTAGGACTTaGTACGTTGTCAGGAAACTTCGGAGGGCTTTCCTGCATAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRNSFIFLGIGSART*YVVRKLRRAFLHKC Trigger: GCACTTATGCAGGAAAGCCCTCCGAAGTTTCCTGACAACGTATCAAGTCCTAGCACTGCCAATCCCCAAGAAGATGAAAGAGTTCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS TCA 72 bp | GTCTGGCGAGAAGGCCACGCTCCAGGTCTCACAGCTTaGCTTCCAGTCGAACTGGTGGGGGCGCCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VWREGHAPGLTA*LPVELVGAPRL Trigger: AAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGAGCGTGGCCTTCTCGCCAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 72 bp | ACGTGCCCAGAGTTTCCTGCTGGGTGGAGAGGGCCATaGGCTGAAGGCCAGCCCCCACACAATCTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TCPEFPAGWRGP*AEGQPPHNLAT Trigger: TGTGGCCAGATTGTGTGGGGGCTGGCCTTCAGCCCATGGCCCTCTCCACCCAGCAGGAAACTCTGGGCACGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CAA 90 bp | GTCTCACAGCTTGACTTCCAGTCGAACTGGTGGGGGCGCCCAGGCTaGAGTTCAGCCAGCAGCAGCGGCTCCTCTGGGGAAGGAGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: VSQLDFQSNWWGRPG*SSASSSGSSGEGEI Trigger: GATCTCTCCTTCCCCAGAGGAGCCGCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111959.2 |
||
| CDS TCA 72 bp | AAGGGCCAGGGGACCAGCTTGACCACGCAGTGTCCTTaGGACCAGGCGAACCAGGAACCGTCTGGCGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KGQGTSLTTQCP*DQANQEPSGEK Trigger: CTTCTCGCCAGACGGTTCCTGGTTCGCCTGGTCTCAAGGACACTGCGTGGTCAAGCTGGTCCCCTGGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 72 bp | CTCCAGGTCTCACAGCTTGACTTCCAGTCGAACTGGTaGGGGCGCCCAGGCTTGAGTTCAGCCAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQVSQLDFQSNW*GRPGLSSASSS Trigger: GCTGCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 72 bp | ACGCTCCAGGTCTCACAGCTTGACTTCCAGTCGAACTaGTGGGGGCGCCCAGGCTTGAGTTCAGCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLQVSQLDFQSN*WGRPGLSSASS Trigger: GCTGCTGGCTGAACTCAAGCCTGGGCGCCCCCACCAGTTCGACTGGAAGTCAAGCTGTGAGACCTGGAGCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS CCA 72 bp | GAGGACAGGACCCGGGGAGCTGTCCAGAACTGGACATaGCCATCTCTCGTCCCTGTGGCAATAATTCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: EDRTRGAVQNWT*PSLVPVAIIPP Trigger: CGGTGGAATTATTGCCACAGGGACGAGAGATGGCCATGTCCAGTTCTGGACAGCTCCCCGGGTCCTGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS GCA 72 bp | CCGCATGCTCCACAGAAAGACCGACTTCTCCCCAGCTaGAGAGCACAGCATGCTACAGTCAGGGGAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PHAPQKDRLLPS*RAQHATVRGDG Trigger: TCCATCTCCCCTGACTGTAGCATGCTGTGCTCTGCAGCTGGGGAGAAGTCGGTCTTTCTGTGGAGCATGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
||
| CDS TCA 72 bp | GTCATCTGCCACCGTAGCGAGATACAAGCCTTCAGGTaGGAAGCACACGGACCTCAGGGAGCTCATGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VICHRSEIQAFR*EAHGPQGAHVD Trigger: GTCCACATGAGCTCCCTGAGGTCCGTGTGCTTCTCACCTGAAGGCTTGTATCTCGCTACGGTGGCAGATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS GCA 72 bp | CAATCTGGCCACAGTCCAGCGTCTTCTCCTTCAGACTaGCCCGTCCTTTTGGGTCATTCTTGCTGCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: QSGHSPASSPSD*PVLLGHSCCFG Trigger: GCCGAAGCAGCAAGAATGACCCAAAAGGACGGGGCAGTCTGAAGGAGAAGACGCTGGACTGTGGCCAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS GCA 72 bp | GTTGTCAGGAAACTTCGGAGGGCTTTCCTGCATAAGTaGTTCAGTGAGGACAGGACCCGGGGAGCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VVRKLRRAFLHK*FSEDRTRGAVQ Trigger: CTGGACAGCTCCCCGGGTCCTGTCCTCACTGAAGCACTTATGCAGGAAAGCCCTCCGAAGTTTCCTGACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CCA 72 bp | CAGCTGCAGAGCACAGCATGCTACAGTCAGGGGAGATaGAGCAGCAGTAAACCCACTGCAGATGGCCGGATA | + |
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Preference number: 6 (lower is better) Translates to: QLQSTACYSQGR*SSSKPTADGRI Trigger: TATCCGGCCATCTGCAGTGGGTTTACTGCTGCTCCATCTCCCCTGACTGTAGCATGCTGTGCTCTGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS GCA 72 bp | AGCAGGAGGCCTGTCTGTACCTCCCAAATCTTGATCTaGCCATCGTTGAGACCTGTGGCCAGGATCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SRRPVCTSQILI*PSLRPVARIRQ Trigger: TTGCCTGATCCTGGCCACAGGTCTCAACGATGGGCAGATCAAGATTTGGGAGGTACAGACAGGCCTCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CCA 72 bp | GTCCAGCGTCTTCTCCTTCAGACTGCCCCGTCCTTTTaGGTCATTCTTGCTGCTTCGGCTCTTGGCTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: VQRLLLQTAPSF*VILAASALGFE Trigger: TTCGAAGCCAAGAGCCGAAGCAGCAAGAATGACCCAAAAGGACGGGGCAGTCTGAAGGAGAAGACGCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CCA 72 bp | TCAGGTGAGAAGCACACGGACCTCAGGGAGCTCATGTaGACGTCACTGTCATCCATGGTGGGTTCAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SGEKHTDLRELM*TSLSSMVGSSC Trigger: ACAGCTTGAACCCACCATGGATGACAGTGACGTCCACATGAGCTCCCTGAGGTCCGTGTGCTTCTCACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CCA 72 bp | TTCAGTGAGGACAGGACCCGGGGAGCTGTCCAGAACTaGACATGGCCATCTCTCGTCCCTGTGGCAATAATT | + |
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Preference number: 6 (lower is better) Translates to: FSEDRTRGAVQN*TWPSLVPVAII Trigger: AATTATTGCCACAGGGACGAGAGATGGCCATGTCCAGTTCTGGACAGCTCCCCGGGTCCTGTCCTCACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CAA 72 bp | AGTCCAGCGTCTTCTCCTTCAGACTGCCCCGTCCTTTaGGGTCATTCTTGCTGCTTCGGCTCTTGGCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: SPASSPSDCPVL*GHSCCFGSWLR Trigger: TCGAAGCCAAGAGCCGAAGCAGCAAGAATGACCCAAAAGGACGGGGCAGTCTGAAGGAGAAGACGCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CAA 90 bp | GTGGCAATAATTCCACCGTGTGGGAAGAACGTGCAGCAAAGACCATaGGTCATCGGAGCAAAGGCAACCGGAGCCTTCAGTTCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: VAIIPPCGKNVQQRP*VIGAKATGAFSSRA Trigger: GGCTCTGGAACTGAAGGCTCCGGTTGCCTTTGCTCCGATGACCAATGGTCTTTGCTGCACGTTCTTCCCACACGGTGGAATTATTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS GCA 72 bp | CTTGATACGTTGTCAGGAAACTTCGGAGGGCTTTCCTaGATAAGTGCTTCAGTGAGGACAGGACCCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LDTLSGNFGGLS*ISASVRTGPGE Trigger: CTCCCCGGGTCCTGTCCTCACTGAAGCACTTATGCAGGAAAGCCCTCCGAAGTTTCCTGACAACGTATCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CCA 72 bp | TTCCACCGTGTGGGAAGAACGTGCAGCAAAGACCATTaGTCATCGGAGCAAAGGCAACCGGAGCCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FHRVGRTCSKDH*SSEQRQPEPSV Trigger: AACTGAAGGCTCCGGTTGCCTTTGCTCCGATGACCAATGGTCTTTGCTGCACGTTCTTCCCACACGGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CCA 72 bp | GCCATCTCTCGTCCCTGTGGCAATAATTCCACCGTGTaGGAAGAACGTGCAGCAAAGACCATTGGTCATCGG | + |
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Preference number: 6 (lower is better) Translates to: AISRPCGNNSTV*EERAAKTIGHR Trigger: CCGATGACCAATGGTCTTTGCTGCACGTTCTTCCCACACGGTGGAATTATTGCCACAGGGACGAGAGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CAA 72 bp | ATTCCACCGTGTGGGAAGAACGTGCAGCAAAGACCATaGGTCATCGGAGCAAAGGCAACCGGAGCCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: IPPCGKNVQQRP*VIGAKATGAFS Trigger: ACTGAAGGCTCCGGTTGCCTTTGCTCCGATGACCAATGGTCTTTGCTGCACGTTCTTCCCACACGGTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS GCA 72 bp | ATTCAGGTCCCAAATTCGAAGTGTCTTATCCCGGGATaGAGAGACCAAAATCAAACTGCCGCTGGGCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: IQVPNSKCLIPG*RDQNQTAAGRE Trigger: TTCACGCCCAGCGGCAGTTTGATTTTGGTCTCTGCATCCCGGGATAAGACACTTCGAATTTGGGACCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS TCA 72 bp | TCTTTCATCTTCTTGGGGATTGGCAGTGCTAGGACTTaGTACGTTGTCAGGAAACTTCGGAGGGCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SFIFLGIGSART*YVVRKLRRAFL Trigger: CAGGAAAGCCCTCCGAAGTTTCCTGACAACGTATCAAGTCCTAGCACTGCCAATCCCCAAGAAGATGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS GCA 72 bp | TGCAGATGGCCGGATAACACCTGGATCTGCTTACCGTaGTTATTCAGGTCCCAAATTCGAAGTGTCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: CRWPDNTWICLP*LFRSQIRSVLS Trigger: GGATAAGACACTTCGAATTTGGGACCTGAATAAGCACGGTAAGCAGATCCAGGTGTTATCCGGCCATCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CAA 72 bp | TCTTCTTGGGGATTGGCAGTGCTAGGACTTGATACGTaGTCAGGAAACTTCGGAGGGCTTTCCTGCATAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSWGLAVLGLDT*SGNFGGLSCIS Trigger: ACTTATGCAGGAAAGCCCTCCGAAGTTTCCTGACAACGTATCAAGTCCTAGCACTGCCAATCCCCAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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| CDS CAA 90 bp | ACTCTTTCATCTTCTTGGGGATTGGCAGTGCTAGGACTTGATACGTaGTCAGGAAACTTCGGAGGGCTTTCCTGCATAAGTGCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: TLSSSWGLAVLGLDT*SGNFGGLSCISASV Trigger: CACTGAAGCACTTATGCAGGAAAGCCCTCCGAAGTTTCCTGACAACGTATCAAGTCCTAGCACTGCCAATCCCCAAGAAGATGAAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031309.16 ENSMUST00000111959.2 |
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