Pregenerated sensors for WSB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017677Ensembl transcript IDs: ENSMUST00000017821.12, ENSMUST00000131818.8, ENSMUST00000131848.8, ENSMUST00000145772.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GKGRPQPGSQRCHSF*PANTIVRLCASGAS Trigger: GCTGGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR GCA 90 bp | ACGCCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGT | + |
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Preference number: 1 (lower is better) Translates to: TPTSTCVRTVHLAAE*KVTSSYGKGRPQPG Trigger: ACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
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| 3UTR GCA 90 bp | CAGTCCATCATGACTGAAAGACACAGCTCTCACCCATCGGTCATTTaGTCCTCCAGCAAATATTGGAGTGGGCGAGGGAAACAGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: QSIMTERHSSHPSVI*SSSKYWSGRGKQVP Trigger: GGGCACCTGTTTCCCTCGCCCACTCCAATATTTGCTGGAGGAGCAAATGACCGATGGGTGAGAGCTGTGTCTTTCAGTCATGATGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR CCA 90 bp | CAGCTCTCACCCATCGGTCATTTGCTCCTCCAGCAAATATTGGAGTaGGCGAGGGAAACAGGTGCCCAAACTCCATCAGAAGGTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: QLSPIGHLLLQQILE*ARETGAQTPSEGLH Trigger: ATGGAGACCTTCTGATGGAGTTTGGGCACCTGTTTCCCTCGCCCACTCCAATATTTGCTGGAGGAGCAAATGACCGATGGGTGAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR GCA 90 bp | TTCCAAAGGAAAACCTGTGTACGTACAGTACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGT | + |
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Preference number: 1 (lower is better) Translates to: FQRKTCVRTVHLAAE*KVTSSYGKGRPQPG Trigger: ACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTTTTCCTTTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR CCA 90 bp | GGCAGTCTTCAGTCTAACCGCGGTAGGAGAGAAACGCCAATATTTTaGAAGGAACAGGCAGTTTTTGGACTTCTTGGGTGGACATCACTC | + |
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Preference number: 1 (lower is better) Translates to: GSLQSNRGRRETPIF*KEQAVFGLLGWTSL Trigger: GAGTGATGTCCACCCAAGAAGTCCAAAAACTGCCTGTTCCTTCCAAAATATTGGCGTTTCTCTCCTACCGCGGTTAGACTGAAGACTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR GCA 90 bp | ACTGCCATCAGTAGAAAAGGCACAGCAAAGACCATTGCTCAAAGGTaGAACTTGTACCGGACAATCCTCATCGATTCTCCAGAACCTCAC | + |
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Preference number: 1 (lower is better) Translates to: TAISRKGTAKTIAQR*NLYRTILIDSPEPH Trigger: GTGAGGTTCTGGAGAATCGATGAGGATTGTCCGGTACAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTGCCTTTTCTACTGATGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR TCA 90 bp | TCTTGGGTGGACATCACTCTTCGGATTGACATGCGACATATATGTTaGAGGCTAGGGACTTGCCTTGGAGTGGCCCAAAAATACACACTT | + |
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Preference number: 1 (lower is better) Translates to: SWVDITLRIDMRHIC*RLGTCLGVAQKYTL Trigger: AAGTGTGTATTTTTGGGCCACTCCAAGGCAAGTCCCTAGCCTTCAACATATATGTCGCATGTCAATCCGAAGAGTGATGTCCACCCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR TCA 90 bp | AACAGGCAGTTTTTGGACTTCTTGGGTGGACATCACTCTTCGGATTaGCATGCGACATATATGTTGAAGGCTAGGGACTTGCCTTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: NRQFLDFLGGHHSSD*HATYMLKARDLPWS Trigger: ACTCCAAGGCAAGTCCCTAGCCTTCAACATATATGTCGCATGTCAATCCGAAGAGTGATGTCCACCCAAGAAGTCCAAAAACTGCCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR GCA 90 bp | AGAACAGTCGGGAGAGAATGCACAACTGTACACCCAATTCTGATGTaGCCGCAATACTTTCACCATGTTTCCATCATCTTTCAGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: RTVGRECTTVHPILM*PQYFHHVSIIFQVP Trigger: TGGGACCTGAAAGATGATGGAAACATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTGTACAGTTGTGCATTCTCTCCCGACTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR TCA 90 bp | AGCATAGAACAGTCGGGAGAGAATGCACAACTGTACACCCAATTCTaGTGTGCCCGCAATACTTTCACCATGTTTCCATCATCTTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SIEQSGENAQLYTQF*CARNTFTMFPSSFR Trigger: CCTGAAAGATGATGGAAACATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTGTACAGTTGTGCATTCTCTCCCGACTGTTCTATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR CCA 90 bp | AAGCTCCCATCTGGAGCAAAAGTTAAATCTCTAACCATTTCAATGTaGTCTACCAAATTAAGGAGGAGTTTTCCTGTATATACATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: KLPSGAKVKSLTISM*STKLRRSFPVYTSQ Trigger: CTGGGATGTATATACAGGAAAACTCCTCCTTAATTTGGTAGACCACATTGAAATGGTTAGAGATTTAACTTTTGCTCCAGATGGGAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131848.8 |
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| 3UTR-3UTR GCA 90 bp | AACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGCATAACCTCAATCACACCACATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC | + |
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Preference number: 2 (lower is better) Translates to: NTIVRLCASGASITSITPHCAPV*EWCQHN Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...TGGTGTGATTGAGGTTATGCTGGCACCACTCGCACACAGGCGCACAATGGTGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTACCACCACTGCTTTACTaGCGCCAACTGAACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: QPNARLLHPMVKVAPSPVPPLLY*RQLNTA Trigger: TGCTGTGTTCAGTTGGCGCCAGTAAAGCAGTGGTGG...TACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR CAA 90 bp | GCAGAAAGTGGACGCCGACCAGCACCTGTGTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCC | + |
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Preference number: 2 (lower is better) Translates to: AESGRRPAPVYVQYT*QPNARLLHPMVKVA Trigger: GGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGGCGTCCACTTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGCCCAAACTCCATCAGAAGGTCTCCATTGTGTGGATCCCAGACATACACACCAGCTAACACCATTGTaGGCCTGTGTGCGAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GAQTPSEGLHCVDPRHTHQLTPL*ACVRVV Trigger: CACCACTCGCACACAGGCGCACAATGGTGTTAGCTG...GTGTGTATGTCTGGGATCCACACAATGGAGACCTTCTGATGGAGTTTGGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTG | + |
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Preference number: 2 (lower is better) Translates to: SQRCHSFCPANTIVRLCARCHSF*PANTIV Trigger: CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT...CGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | CCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCACGTACAGTACACCTTaGAGCCGAATGCAAGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: PNARLLHPMVKVAPSPVATYSTP*SRMQGY Trigger: GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGT...GGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR CAA 90 bp | AAGACACAGCTCTCACCCATCGGTCATTTGCTCCTCCAGCAAATATaGGAGTGGGCGAGGGAAACAGGTGCCCAAACTCCATCAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KTQLSPIGHLLLQQI*EWARETGAQTPSEG Trigger: ACCTTCTGATGGAGTTTGGGCACCTGTTTCCCTCGCCCACTCCAATATTTGCTGGAGGAGCAAATGACCGATGGGTGAGAGCTGTGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGCTGTACACCCAATTCTaGTGTGCCCGCAATACTTTC | + |
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Preference number: 2 (lower is better) Translates to: LQPNARLLHPMVKVAPSPLYTQF*CARNTF Trigger: GAAAGTATTGCGGGCACATCAGAATTGGGTGTACAG...CGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGTTTACTGGCGCCAACTaGACACAGCATAGAACAGTC | + |
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Preference number: 2 (lower is better) Translates to: LQPNARLLHPMVKVAPSPFTGAN*TQHRTV Trigger: GACTGTTCTATGCTGTGTTCAGTTGGCGCCAGTAAA...CGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTG | + |
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Preference number: 2 (lower is better) Translates to: RDATLSAQLTPLCACVRVRCHSF*PANTIV Trigger: CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT...CACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAACGTACAGTACACCTTaGAGCCGAATGCAAGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: QPNARLLHPMVKVAPSPVTYSTP*SRMQGY Trigger: GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGT...TACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGAATGCACAACTGTACACCCAATTCTGATGTGCCCGCAATACTTTCACCAGCTAACACCATTGTaGGCCTGTGTGCGAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GRECTTVHPILMCPQYFHQLTPL*ACVRVV Trigger: CACCACTCGCACACAGGCGCACAATGGTGTTAGCTG...GTGAAAGTATTGCGGGCACATCAGAATTGGGTGTACAGTTGTGCATTCTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTCATTGTGCGCCTGTGTaGGAGTGGTGCCAGCATAAC | + |
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Preference number: 2 (lower is better) Translates to: KPVYVQYTLQPNARLLHPHCAPV*EWCQHN Trigger: GTTATGCTGGCACCACTCGCACACAGGCGCACAATG...AGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCCCGCAATACTTTCACCATGTTTCCATCATCTTTCAGGTCCCACACTCTCAGCTAACACCATTGTaGGCCTGTGTGCGAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: MCPQYFHHVSIIFQVPHSQLTPL*ACVRVV Trigger: CACCACTCGCACACAGGCGCACAATGGTGTTAGCTG...AGAGTGTGGGACCTGAAAGATGATGGAAACATGGTGAAAGTATTGCGGGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | AACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGCATAACCTCAATCACACCACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTAT | + |
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Preference number: 2 (lower is better) Translates to: NTIVRLCASGASITSITPHLAAE*KVTSSY Trigger: ATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTG...TGGTGTGATTGAGGTTATGCTGGCACCACTCGCACACAGGCGCACAATGGTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | AACACCATTGTGCGCCTGTGTGCGAGTGGTGCCAGCATAACCTCAATCACACCAACAGTCGGGAGAGAATaGACAACTGTACACCCAATT | + |
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Preference number: 2 (lower is better) Translates to: NTIVRLCASGASITSITPTVGRE*TTVHPI Trigger: AATTGGGTGTACAGTTGTGCATTCTCTCCCGACTGT...TGGTGTGATTGAGGTTATGCTGGCACCACTCGCACACAGGCGCACAATGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGAATGCACAACTGTACACCCAATTCTGATGTGCCCGCAATACTTTCACAGATGCCACTCTTTCTaGCCAGCTAACACCATTGTG | + |
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Preference number: 2 (lower is better) Translates to: GRECTTVHPILMCPQYFHRCHSF*PANTIV Trigger: CACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT...GTGAAAGTATTGCGGGCACATCAGAATTGGGTGTACAGTTGTGCATTCTCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | CATTGTGCGCCTGTGTGCGAGTGGTGCCAGCATAACCTCAATCACACCAATATTCACCCAATTCTGATGTaGCCGCAATACTTTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: HCAPVCEWCQHNLNHTNIHPILM*PQYFHH Trigger: ATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTG...AATATTGGTGTGATTGAGGTTATGCTGGCACCACTCGCACACAGGCGCACAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | TACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGCCTGTGTGCGAGTGGTaGCAGCATAACCTCAATCAC | + |
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Preference number: 2 (lower is better) Translates to: YVQYTLQPNARLLHPMVKPVCEW*QHNLNH Trigger: GTGATTGAGGTTATGCTGGCACCACTCGCACACAGG...CTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR TCA 90 bp | TACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGCTGTACACCCAATTCTaGTGTGCCCGCAATACTTTC | + |
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Preference number: 2 (lower is better) Translates to: YVQYTLQPNARLLHPMVKLYTQF*CARNTF Trigger: GAAAGTATTGCGGGCACATCAGAATTGGGTGTACAG...CTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR CAA 90 bp | TTCACCATGTTTCCATCATCTTTCAGGTCCCACACTCTTAGAGTTTaGTCTCTTGAAGCTGATACAAGGAGTAAGCTCCCATCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: FTMFPSSFRSHTLRV*SLEADTRSKLPSGA Trigger: TGCTCCAGATGGGAGCTTACTCCTTGTATCAGCTTCAAGAGACAAAACTCTAAGAGTGTGGGACCTGAAAGATGATGGAAACATGGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGCAATGCTCCATCAGGAGAAAAGTCACAAGCTACAACATCATGGTGATGACCACCTTGCAGCCGAATaGAAGGTTACTTCATCCTAT | + |
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Preference number: 2 (lower is better) Translates to: LAMLHQEKSHKLQHHGDDHLAAE*KVTSSY Trigger: ATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTG...GTCATCACCATGATGTTGTAGCTTGTGACTTTTCTCCTGATGGAGCATTGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR-3UTR GCA 90 bp | TACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGCACCTTGCAGCCGAATaGAAGGTTACTTCATCCTAT | + |
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Preference number: 2 (lower is better) Translates to: YVQYTLQPNARLLHPMVKHLAAE*KVTSSY Trigger: ATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTG...CTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR GCA 90 bp | GTACACCCAATTCTGATGTGCCCGCAATACTTTCACCATGTTTCCATCATCTTTACGTACAGTACACCTTaGAGCCGAATGCAAGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: VHPILMCPQYFHHVSIIFTYSTP*SRMQGY Trigger: GTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGT...AAAGATGATGGAAACATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAATGCACAACTGTACACCCAATTCTGATGTGCCCGCAATACTTTCACCATCATTGTTTAATCCTGTaGCAAGGAGTAGCTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: RECTTVHPILMCPQYFHHHCLIL*QGVADP Trigger: AGGATCAGCTACTCCTTGCCACAGGATTAAACAATG...ATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTGTACAGTTGTGCATTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131848.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCTCACACCATCTATCCTaGCCAATTCCATTTCCTATG | + |
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Preference number: 2 (lower is better) Translates to: IITFKLPDTILLETLFHISHHLS*PIPFPM Trigger: CATAGGAAATGGAATTGGTCAGGATAGATGGTGTGA...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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| 3UTR-3UTR CAA 90 bp | ACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTGCCCAGCTAACACCATaGTGCGCCTGTGTGCGAGTG | + |
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Preference number: 3 (lower is better) Translates to: TSSYGKGRPQPGSQRCHSAQLTP*CACVRV Trigger: CACTCGCACACAGGCGCACAATGGTGTTAGCTGGGC...AGAGTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR CAA 90 bp | CCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: PNARLLHPMVKVAPSPVAYVQYT*QPNARL Trigger: TAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA...GGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131818.8 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| 3UTR-3UTR CAA 90 bp | GTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGGTAGCCAGAGATGCCACTCACCCATCGGTCATTaGCTCCTCCAGCAAATATTG | + |
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Preference number: 3 (lower is better) Translates to: VTSSYGKGRPQPGSQRCHSPIGH*LLQQIL Trigger: CAATATTTGCTGGAGGAGCAAATGACCGATGGGTGA...GTGGCATCTCTGGCTACCGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR GCA 72 bp | CCTCCAGCAAATATTGGAGTGGGCGAGGGAAACAGGTaGCCAAACTCCATCAGAAGGTCTCCATTGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PPANIGVGEGNR*PNSIRRSPLCG Trigger: TCCACACAATGGAGACCTTCTGATGGAGTTTGGGCACCTGTTTCCCTCGCCCACTCCAATATTTGCTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR CCA 72 bp | CCCATCGGTCATTTGCTCCTCCAGCAAATATTGGAGTaGGCGAGGGAAACAGGTGCCCAAACTCCATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PIGHLLLQQILE*ARETGAQTPSE Trigger: TTCTGATGGAGTTTGGGCACCTGTTTCCCTCGCCCACTCCAATATTTGCTGGAGGAGCAAATGACCGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| 3UTR TCA 72 bp | CATCAGCAAGGCTGGCAACATGCAGTCCATCATGACTaGAAGACACAGCTCTCACCCATCGGTCATTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HQQGWQHAVHHD*KTQLSPIGHLL Trigger: GAGCAAATGACCGATGGGTGAGAGCTGTGTCTTTCAGTCATGATGGACTGCATGTTGCCAGCCTTGCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR GCA 72 bp | AGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTATGGTAAAGGTCGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: STCVRTVHLAAE*KVTSSYGKGRP Trigger: GGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
||
| 3UTR CCA 72 bp | CAGGTGCCCAAACTCCATCAGAAGGTCTCCATTGTGTaGATCCCAGACATACACACGAGTGTCATAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: QVPKLHQKVSIV*IPDIHTSVIGC Trigger: GCATCCTATGACACTCGTGTGTATGTCTGGGATCCACACAATGGAGACCTTCTGATGGAGTTTGGGCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAAGTGGACGCCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCCGACACACTCTTAGAGTTTaGTCTCTTGAAGCTGATACA | + |
|
Preference number: 3 (lower is better) Translates to: QKVDADQHLCTYSTPCSRHTLRV*SLEADT Trigger: TGTATCAGCTTCAAGAGACAAAACTCTAAGAGTGTG...TCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGGCGTCCACTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QHLCTYSTPCSRMQGYFIYVQYT*QPNARL Trigger: TAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA...GATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
||
| 3UTR GCA 72 bp | AAAACCTGTGTACGTACAGTACACCTTGCAGCCGAATaGAAGGTTACTTCATCCTATGGTAAAGGTCGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KTCVRTVHLAAE*KVTSSYGKGRP Trigger: GGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR CCA 72 bp | CAGTCTAACCGCGGTAGGAGAGAAACGCCAATATTTTaGAAGGAACAGGCAGTTTTTGGACTTCTTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QSNRGRRETPIF*KEQAVFGLLGW Trigger: CCACCCAAGAAGTCCAAAAACTGCCTGTTCCTTCCAAAATATTGGCGTTTCTCTCCTACCGCGGTTAGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR TCA 72 bp | GACATCACTCTTCGGATTGACATGCGACATATATGTTaGAGGCTAGGGACTTGCCTTGGAGTGGCCCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DITLRIDMRHIC*RLGTCLGVAQK Trigger: TTTTTGGGCCACTCCAAGGCAAGTCCCTAGCCTTCAACATATATGTCGCATGTCAATCCGAAGAGTGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR TCA 72 bp | CAGTCGGGAGAGAATGCACAACTGTACACCCAATTCTaGTGTGCCCGCAATACTTTCACCATGTTTCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: QSGENAQLYTQF*CARNTFTMFPS Trigger: TGATGGAAACATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTGTACAGTTGTGCATTCTCTCCCGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| 3UTR TCA 72 bp | ATGCGACCATTGTTTAATCCTGTGGCAAGGAGTAGCTaGTCCTGTCCAAATCGGAACCGATGCCATTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: MRPLFNPVARSS*SCPNRNRCHSI Trigger: TATAGAATGGCATCGGTTCCGATTTGGACAGGATCAGCTACTCCTTGCCACAGGATTAAACAATGGTCGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131848.8 |
||
| 3UTR GCA 72 bp | AGTAGAAAAGGCACAGCAAAGACCATTGCTCAAAGGTaGAACTTGTACCGGACAATCCTCATCGATTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRKGTAKTIAQR*NLYRTILIDSP Trigger: TGGAGAATCGATGAGGATTGTCCGGTACAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTGCCTTTTCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR CCA 72 bp | CATGCGACATATATGTTGAAGGCTAGGGACTTGCCTTaGAGTGGCCCAAAAATACACACTTCCATCATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HATYMLKARDLP*SGPKIHTSIMC Trigger: ACACATGATGGAAGTGTGTATTTTTGGGCCACTCCAAGGCAAGTCCCTAGCCTTCAACATATATGTCGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR TCA 72 bp | TTTTTGGACTTCTTGGGTGGACATCACTCTTCGGATTaGCATGCGACATATATGTTGAAGGCTAGGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLDFLGGHHSSD*HATYMLKARDL Trigger: CAAGTCCCTAGCCTTCAACATATATGTCGCATGTCAATCCGAAGAGTGATGTCCACCCAAGAAGTCCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| 3UTR TCA 72 bp | TTTCACACCATCTATCCTGACCAATTCCATTTCCTATaGGGCAATTCATCTCATCTAAACTTAGTGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FHTIYPDQFHFL*GNSSHLNLVPP Trigger: TGGGGGCACTAAGTTTAGATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | CGCCCCCAGCCCGGTAGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTCCACCACTGCTTTACTaGCGCCAACTGAACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPQPGSQRCHSFCPANTIPPLLY*RQLNTA Trigger: TGCTGTGTTCAGTTGGCGCCAGTAAAGCAGTGGTGG...AATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCTACCGGGCTGGGGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGAGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGTTTACTGGCGCCAACTaGACACAGCATAGAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQRCHSFCPANTIVRLCAFTGAN*TQHRTV Trigger: GACTGTTCTATGCTGTGTTCAGTTGGCGCCAGTAAA...CGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGCTTGTCAAAAGGAGCTaGTGGAGCCAAGAGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQTLELVKLEVCLVKGALLVKRS*WSQEFP Trigger: GGGGAACTCTTGGCTCCAGCAGCTCCTTTTGACAAG...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | CCTGTGTGCGAGTGGTGCCAGCATAACCTCAATCACACCAATATTGCTGCCACCCTTGTCAAAAGGAGCTaGTGGAGCCAAGAGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVCEWCQHNLNHTNIAATLVKRS*WSQEFP Trigger: GGGGAACTCTTGGCTCCAGCAGCTCCTTTTGACAAG...GGTGGCAGCAATATTGGTGTGATTGAGGTTATGCTGGCACCACTCGCACACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGAAAGTGGACGCCGACCAGCACCTGTGTACGTACAGTACACCTTGCAGCGTCAAAAGGAGCTGCTaGAGCCAAGAGTTCCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQKVDADQHLCTYSTPCSVKRSC*SQEFPY Trigger: ATAGGGGAACTCTTGGCTCCAGCAGCTCCTTTTGAC...GCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGGCGTCCACTTTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
||
| 3UTR CAA 72 bp | GCGAGTGGTGCCAGCATAACCTCAATCACACCAATATaGCTGCCACCACTGCTTTACTGGCGCCAACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGASITSITPI*LPPLLYWRQLN Trigger: GTTCAGTTGGCGCCAGTAAAGCAGTGGTGGCAGCAATATTGGTGTGATTGAGGTTATGCTGGCACCACTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| 3UTR CAA 72 bp | GGACGCCGACCAGCACCTGTGTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTACTTCATCCTATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRRPAPVYVQYT*QPNARLLHPMV Trigger: TACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGGCGTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
||
| CDS-3UTR TCA 90 bp | TGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCCTGTTTTTCTGGAACTaGAGACCCAAAAGCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CHSFCPANTIVRLCASGALFFWN*RPKSKT Trigger: AGTCTTGCTTTTGGGTCTTCAGTTCCAGAAAAACAG...GGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR TCA 90 bp | AGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTCTGTACACCCAATTCTaGTGTGCCCGCAATACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCHSFCPANTIVRLCASGLYTQF*CARNTF Trigger: GAAAGTATTGCGGGCACATCAGAATTGGGTGTACAG...ACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGGACAAGCTTCACTATaGGATATCCTTGTGACCACG | + |
|
Preference number: 4 (lower is better) Translates to: RCHSFCPANTIVRLCASGGQASL*DILVTT Trigger: CGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCC...ACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGGTCAAAAGGAGCTGCTaGAGCCAAGAGTTCCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GQTLELVKLEVCLVKGALVKRSC*SQEFPY Trigger: ATAGGGGAACTCTTGGCTCCAGCAGCTCCTTTTGAC...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR TCA 90 bp | TTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGGTCGCCCCCAGCCCGTTCCCCTATAGTACGTaGTCTCACGATCTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQPNARLLHPMVKVAPSPFPYST*SHDLFL Trigger: GAGAAAGAGATCGTGAGATCACGTACTATAGGGGAA...CGGGCTGGGGGCGACCTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAAGCAGAAAGTGGACGCCGACCAGCACCTGTGTACGTACAGTACACCTCTTGTCAAAAGGAGCTaGTGGAGCCAAGAGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKQKVDADQHLCTYSTPLVKRS*WSQEFP Trigger: GGGGAACTCTTGGCTCCAGCAGCTCCTTTTGACAAG...AGGTGTACTGTACGTACACAGGTGCTGGTCGGCGTCCACTTTCTGCTTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGCACCCATCGGTCATTTaGTCCTCCAGCAAATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQTLELVKLEVCLVKGALHPSVI*SSSKYW Trigger: CCAATATTTGCTGGAGGAGCAAATGACCGATGGGTG...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | GCGCCAACTGAACACAGCATAGAACAGTCGGGAGAGAATGCACAACTGTACACCGTCAAAAGGAGCTGCTaGAGCCAAGAGTTCCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: APTEHSIEQSGENAQLYTVKRSC*SQEFPY Trigger: ATAGGGGAACTCTTGGCTCCAGCAGCTCCTTTTGAC...GGTGTACAGTTGTGCATTCTCTCCCGACTGTTCTATGCTGTGTTCAGTTGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGGGAACAGGCAGTTTTTaGACTTCTTGGGTGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: GQTLELVKLEVCLVKGALGTGSF*TSWVDI Trigger: GATGTCCACCCAAGAAGTCCAAAAACTGCCTGTTCC...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR TCA 90 bp | TGCCACTCTTTCTGCCCAGCTAACACCATTGTGCGCCTGTGTGCGAGTGGTGCCATACATCCCAGATTTTaGTGCGACCATTGTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: CHSFCPANTIVRLCASGAIHPRF*CDHCLI Trigger: GATTAAACAATGGTCGCATCAAAATCTGGGATGTAT...GGCACCACTCGCACACAGGCGCACAATGGTGTTAGCTGGGCAGAAAGAGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGCCACAGTCTATAACGTaGTCAGGAGGCTTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQTLELVKLEVCLVKGALPQSIT*SGGLFF Trigger: GAAAAACAAGCCTCCTGAGCACGTTATAGACTGTGG...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGTATCATCAGCAAGGCTaGCAACATGCAGTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQTLELVKLEVCLVKGALYHQQG*QHAVHH Trigger: ATGATGGACTGCATGTTGCCAGCCTTGCTGATGATA...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGAGTTTTTGGACTTCTTaGGTGGACATCACTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQTLELVKLEVCLVKGALSFWTS*VDITLR Trigger: CCGAAGAGTGATGTCCACCCAAGAAGTCCAAAAACT...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | AAACTCCATCAGAAGGTCTCCATTGTGTGGATCCCAGACATACACACGAGTGTCTCACACCAATATTGCTaGCACCACTGCTTTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLHQKVSIVWIPDIHTSVSHQYC*HHCFTG Trigger: GCCAGTAAAGCAGTGGTGGCAGCAATATTGGTGTGA...GACACTCGTGTGTATGTCTGGGATCCACACAATGGAGACCTTCTGATGGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTTCCCCTATAGTACGTaGTCTCACGATCTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCTYSTPCSRMQGYFILWFPYST*SHDLFL Trigger: GAGAAAGAGATCGTGAGATCACGTACTATAGGGGAA...CCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAAACTCCATCAGAAGGTCTCCATTGTGTGGATCCCAGACATACACACGAGCCAAATCGGAACCGATaGCATTCTATATTAACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQTPSEGLHCVDPRHTHEPNRNR*HSILTQ Trigger: TTGCGTTAATATAGAATGGCATCGGTTCCGATTTGG...CTCGTGTGTATGTCTGGGATCCACACAATGGAGACCTTCTGATGGAGTTTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR GCA 90 bp | TTCACACCATCTATCCTGACCAATTCCATTTCCTATGAGGCAATTCATCTCATCGGCGAGGGAAACAGGTaGCCAAACTCCATCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTPSILTNSISYEAIHLIGEGNR*PNSIRR Trigger: CCTTCTGATGGAGTTTGGGCACCTGTTTCCCTCGCC...GATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCAACAGTCGGGAGAGAATaGACAACTGTACACCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RKTCVRTVHLAAECKVTSTVGRE*TTVHPI Trigger: AATTGGGTGTACAGTTGTGCATTCTCTCCCGACTGT...TGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR CCA 90 bp | TTCACACCATCTATCCTGACCAATTCCATTTCCTATGAGGCAATTCATCTCATCCAGCAAATATTGGAGTaGGCGAGGGAAACAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTPSILTNSISYEAIHLIQQILE*ARETGA Trigger: GGCACCTGTTTCCCTCGCCCACTCCAATATTTGCTG...GATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR TCA 90 bp | CATCAGGAGAAAAGTCACAAGCTACAACATCATGGTGATGACCTTCCAGCTTCCGGAGGCTTGTTTTTCTaGCCACCATTACTGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HQEKSHKLQHHGDDLPASGGLFF*PPLLFC Trigger: ACAAAACAGTAATGGTGGTCAGAAAAACAAGCCTCC...GGAAGCTGGAAGGTCATCACCATGATGTTGTAGCTTGTGACTTTTCTCCTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR TCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACGCAGTCCATCATGACTaGAAGACACAGCTCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDAVHHD*KTQLSP Trigger: GGGTGAGAGCTGTGTCTTTCAGTCATGATGGACTGC...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | CATCAGGAGAAAAGTCACAAGCTACAACATCATGGTGATGACCTTCCAGCTTCCCATTGTTTAATCCTGTaGCAAGGAGTAGCTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQEKSHKLQHHGDDLPASHCLIL*QGVADP Trigger: AGGATCAGCTACTCCTTGCCACAGGATTAAACAATG...GGAAGCTGGAAGGTCATCACCATGATGTTGTAGCTTGTGACTTTTCTCCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR TCA 90 bp | TTCACACCATCTATCCTGACCAATTCCATTTCCTATGAGGCAATTCATCTCATCCTGTACACCCAATTCTaGTGTGCCCGCAATACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTPSILTNSISYEAIHLILYTQF*CARNTF Trigger: GAAAGTATTGCGGGCACATCAGAATTGGGTGTACAG...GATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACTCCTCCAGCAAATATTaGAGTGGGCGAGGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDSSSKY*SGRGKQ Trigger: CTGTTTCCCTCGCCCACTCCAATATTTGCTGGAGGA...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACGCTAGGGACTTGCCTTaGAGTGGCCCAAAAATACAC | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDARDLP*SGPKIH Trigger: GTGTATTTTTGGGCCACTCCAAGGCAAGTCCCTAGC...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| 3UTR CAA 72 bp | TATTCCAAAGGAAAACCTGTGTACGTACAGTACACCTaGCAGCCGAATGCAAGGTTACTTCATCCTATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YSKGKPVYVQYT*QPNARLLHPMV Trigger: TACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTTTTCCTTTGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR TCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCTTTACTGGCGCCAACTaGACACAGCATAGAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFFTGAN*TQHRTV Trigger: GACTGTTCTATGCTGTGTTCAGTTGGCGCCAGTAAA...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACGGACAAGCTTCACTATaGGATATCCTTGTGACCACG | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDGQASL*DILVTT Trigger: CGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCC...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | AAACCTGTGTACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTCTAACCATTTCAATGTaGTCTACCAAATTAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVYVQYTLQPNARLLHPLTISM*STKLRR Trigger: CCTCCTTAATTTGGTAGACCACATTGAAATGGTTAG...AGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACGGAAAACTGCTTTACTaGCGCCAACTGAACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDGKLLY*RQLNTA Trigger: TGCTGTGTTCAGTTGGCGCCAGTAAAGCAGTTTTCC...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCAAGGTCTCCATTGTGTaGATCCCAGACATACACACG | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFKVSIV*IPDIHT Trigger: CGTGTGTATGTCTGGGATCCACACAATGGAGACCTT...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR TCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCTTCCCCTATAGTACGTaGTCTCACGATCTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFFPYST*SHDLFL Trigger: GAGAAAGAGATCGTGAGATCACGTACTATAGGGGAA...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR TCA 90 bp | TTCACACCATCTATCCTGACCAATTCCATTTCCTATGAGGCAATTCATCTCATCCATCACTCTTCGGATTaGCATGCGACATATATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTPSILTNSISYEAIHLIHHSSD*HATYML Trigger: CAACATATATGTCGCATGTCAATCCGAAGAGTGATG...GATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCCACCCAATTCTGATGTaGCCGCAATACTTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFHPILM*PQYFHH Trigger: ATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTG...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCACCATTGCTCAAAGGTaGAACTTGTACCGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFTIAQR*NLYRTI Trigger: GATTGTCCGGTACAAGTTGCACCTTTGAGCAATGGT...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCGGACTTGCCTTGGAGTaGCCCAAAAATACACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IITFKLPDTILLETLFHIGLALE*PKNTHF Trigger: GAAGTGTGTATTTTTGGGCCACTCCAAGGCAAGTCC...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACTTTGGACTTCTTGGGTaGACATCACTCTTCGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDFGLLG*TSLFGL Trigger: CAATCCGAAGAGTGATGTCCACCCAAGAAGTCCAAA...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR TCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCCTGTTTTTCTGGAACTaGAGACCCAAAAGCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFLFFWN*RPKSKT Trigger: AGTCTTGCTTTTGGGTCTTCAGTTCCAGAAAAACAG...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR TCA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCATGCGACATATATGTTaGAGGCTAGGGACTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IITFKLPDTILLETLFHIMRHIC*RLGTCL Trigger: AAGGCAAGTCCCTAGCCTTCAACATATATGTCGCAT...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | ATGGTGTATTTATCCATATTCCAAAGGAAAACCTGTGTACGTACAGTACACCTTCCACAGTCTATAACGTaGTCAGGAGGCTTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MVYLSIFQRKTCVRTVHLPQSIT*SGGLFF Trigger: GAAAAACAAGCCTCCTGAGCACGTTATAGACTGTGG...AAGGTGTACTGTACGTACACAGGTTTTCCTTTGGAATATGGATAAATACACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTGTATTTATCCATATTCCAAAGGAAAACCTGTGTACGTACAGTACACCTTCACCCAATTCTGATGTaGCCGCAATACTTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: MVYLSIFQRKTCVRTVHLHPILM*PQYFHH Trigger: ATGGTGAAAGTATTGCGGGCACATCAGAATTGGGTG...AAGGTGTACTGTACGTACACAGGTTTTCCTTTGGAATATGGATAAATACACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
||
| CDS-3UTR GCA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCACAGTCGGGAGAGAATaGACAACTGTACACCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: IITFKLPDTILLETLFHITVGRE*TTVHPI Trigger: AATTGGGTGTACAGTTGTGCATTCTCTCCCGACTGT...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCCACAGCAAAGACCATTaGTCAAAGGTGCAACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFHSKDH*SKVQLV Trigger: TACAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTG...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACCATTGTTTAATCCTGTaGCAAGGAGTAGCTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDHCLIL*QGVADP Trigger: AGGATCAGCTACTCCTTGCCACAGGATTAAACAATG...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| 3UTR CAA 72 bp | TTAAGGAGGAGTTTTCCTGTATATACATCCCAGATTTaGATGCGACCATTGTTTAATCCTGTGGCAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRRSFPVYTSQI*MRPLFNPVARS Trigger: ACTCCTTGCCACAGGATTAAACAATGGTCGCATCAAAATCTGGGATGTATATACAGGAAAACTCCTCCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131848.8 |
||
| CDS-3UTR TCA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCGGAGGCTTGTTTTTCTaGCCACCATTACTGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IITFKLPDTILLETLFHIGGLFF*PPLLFC Trigger: ACAAAACAGTAATGGTGGTCAGAAAAACAAGCCTCC...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCCCAAATCGGAACCGATaGCATTCTATATTAACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFPNRNR*HSILTQ Trigger: TTGCGTTAATATAGAATGGCATCGGTTCCGATTTGG...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR GCA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCCTCTTCGGATTGACATaGGACATATATGTTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IITFKLPDTILLETLFHILFGLT*DIYVEG Trigger: GCCTTCAACATATATGTCGCATGTCAATCCGAAGAG...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | ATACTTTCACCATGTTTCCATCATCTTTCAGGTCCCACACTCTTAGAGTTTTGTACGACTCTGTTTTTCTaGAAAAGTTCTTACGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ILSPCFHHLSGPTLLEFCTTLFF*KSSYGT Trigger: AGTGCCGTAAGAACTTTTCCAGAAAAACAGAGTCGT...ACAAAACTCTAAGAGTGTGGGACCTGAAAGATGATGGAAACATGGTGAAAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131848.8 |
||
| CDS-3UTR TCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCATACATCCCAGATTTTaGTGCGACCATTGTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFIHPRF*CDHCLI Trigger: GATTAAACAATGGTCGCATCAAAATCTGGGATGTAT...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCCTAACCATTTCAATGTaGTCTACCAAATTAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFLTISM*STKLRR Trigger: CCTCCTTAATTTGGTAGACCACATTGAAATGGTTAG...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACGAAACGCCAATATTTTaGAAGGAACAGGCAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDETPIF*KEQAVF Trigger: AAAAACTGCCTGTTCCTTCCAAAATATTGGCGTTTC...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| 3UTR CAA 72 bp | ATAAATAAAAGAAGGCTAAAGCAGACATACTGTGTATaGCTTCTCTTTGGTAAGTTACCAATATCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: INKRRLKQTYCV*LLFGKLPISSA Trigger: TGCAGAGGATATTGGTAACTTACCAAAGAGAAGCAATACACAGTATGTCTGCTTTAGCCTTCTTTTATTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS TCA 90 bp | ACGGCACTGGGACCACGGGACAAGCTTCACTATGCGATATCCTTGTaGCCACGCAAAGTAGGAACCATCAGGAGCAAAAGCAACCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TALGPRDKLHYAISL*PRKVGTIRSKSNRP Trigger: TGGACGGTTGCTTTTGCTCCTGATGGTTCCTACTTTGCGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCCCGTGGTCCCAGTGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017821.12 ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS-3UTR CAA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGTCACCACCACATTTCTaGTCAAAAGGAGCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQTLELVKLEVCLVKGALSPPHF*SKGAAG Trigger: TCCAGCAGCTCCTTTTGACAAGAAATGTGGTGGTGA...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CAA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGCATGCGACATATATGTaGAAGGCTAGGGACTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GQTLELVKLEVCLVKGALHATYM*KARDLP Trigger: AGGCAAGTCCCTAGCCTTCAACATATATGTCGCATG...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CAA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGAGGAACAGGCAGTTTTaGGACTTCTTGGGTGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: GQTLELVKLEVCLVKGALRNRQF*DFLGGH Trigger: ATGTCCACCCAAGAAGTCCAAAAACTGCCTGTTCCT...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS GCA 90 bp | TGGAAAAGTTCTTACGGCACTGGGACCACGGGACAAGCTTCACTATaGGATATCCTTGTGACCACGCAAAGTAGGAACCATCAGGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WKSSYGTGTTGQASL*DILVTTQSRNHQEQ Trigger: TTGCTCCTGATGGTTCCTACTTTGCGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCCCGTGGTCCCAGTGCCGTAAGAACTTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131848.8 |
||
| CDS-3UTR CAA 90 bp | GCGCCAACTGAACACAGCATAGAACAGTCGGGAGAGAATGCACAACTGTACACCTCACCACCACATTTCTaGTCAAAAGGAGCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: APTEHSIEQSGENAQLYTSPPHF*SKGAAG Trigger: TCCAGCAGCTCCTTTTGACAAGAAATGTGGTGGTGA...GGTGTACAGTTGTGCATTCTCTCCCGACTGTTCTATGCTGTGTTCAGTTGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS GCA 90 bp | AAAGAAAGTTCTTACGGCACTGGGACCACGGGACAAGCTTCACTATaGGATATCCTTGTGACCACGCAAAGTAGGAACCATCAGGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KESSYGTGTTGQASL*DILVTTQSRNHQEQ Trigger: TTGCTCCTGATGGTTCCTACTTTGCGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCCCGTGGTCCCAGTGCCGTAAGAACTTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS GCA 90 bp | TTTTCAAGTTCTTACGGCACTGGGACCACGGGACAAGCTTCACTATaGGATATCCTTGTGACCACGCAAAGTAGGAACCATCAGGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSSSYGTGTTGQASL*DILVTTQSRNHQEQ Trigger: TTGCTCCTGATGGTTCCTACTTTGCGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCCCGTGGTCCCAGTGCCGTAAGAACTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145772.8 |
||
| CDS-3UTR CAA 90 bp | CTGATGTGCCCGCAATACTTTCACCATGTTTCCATCATCTTTCAGGTCCCACACTCACCACCACATTTCTaGTCAAAAGGAGCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LMCPQYFHHVSIIFQVPHSPPHF*SKGAAG Trigger: TCCAGCAGCTCCTTTTGACAAGAAATGTGGTGGTGA...GTGTGGGACCTGAAAGATGATGGAAACATGGTGAAAGTATTGCGGGCACATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131848.8 ENSMUST00000145772.8 |
||
| CDS-3UTR CAA 90 bp | GGACAGACGCTTGAGCTGGTAAAGCTTGAGGTGTGTCTTGTAAAGGGCGCTCTGAGAAACGCCAATATTTaGGAAGGAACAGGCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GQTLELVKLEVCLVKGALRNANI*EGTGSF Trigger: AAAACTGCCTGTTCCTTCCAAAATATTGGCGTTTCT...CAGAGCGCCCTTTACAAGACACACCTCAAGCTTTACCAGCTCAAGCGTCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS CCA 90 bp | TTGGTAACATTTTTGGAACCATGCAAAAGAAAGTTCTTACGGCACTaGGACCACGGGACAAGCTTCACTATGCGATATCCTTGTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVTFLEPCKRKFLRH*DHGTSFTMRYPCDH Trigger: GTGGTCACAAGGATATCGCATAGTGAAGCTTGTCCCGTGGTCCCAGTGCCGTAAGAACTTTCTTTTGCATGGTTCCAAAAATGTTACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CAA 90 bp | TTCACACCATCTATCCTGACCAATTCCATTTCCTATGAGGCAATTCATCTCATCGCTCAAAGGTGCAACTaGTACCGGACAATCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FTPSILTNSISYEAIHLIAQRCN*YRTILI Trigger: GATGAGGATTGTCCGGTACAAGTTGCACCTTTGAGC...GATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS TCA 90 bp | CCGATGCCATTCTATATTAACGCAACGACTCTGTTTTTCTGGAACTaGAGACCCAAAAGCAAGACTCCAGACTATGTCTCCACAGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PMPFYINATTLFFWN*RPKSKTPDYVSTVY Trigger: ATAGACTGTGGAGACATAGTCTGGAGTCTTGCTTTTGGGTCTTCAGTTCCAGAAAAACAGAGTCGTTGCGTTAATATAGAATGGCATCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017821.12 ENSMUST00000131818.8 |
||
| CDS TCA 90 bp | CAGATTTTGATGCGACCATTGTTTAATCCTGTGGCAAGGAGTAGCTaGTCCTGTCCAAATCGGAACCGATGCCATTCTATATTAACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QILMRPLFNPVARSS*SCPNRNRCHSILTQ Trigger: TTGCGTTAATATAGAATGGCATCGGTTCCGATTTGGACAGGATCAGCTACTCCTTGCCACAGGATTAAACAATGGTCGCATCAAAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017821.12 ENSMUST00000131818.8 |
||
| CDS-3UTR CAA 90 bp | TTCACACCATCTATCCTGACCAATTCCATTTCCTATGAGGCAATTCATCTCATCATCAGAAGGTCTCCATaGTGTGGATCCCAGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: FTPSILTNSISYEAIHLIIRRSP*CGSQTY Trigger: GTATGTCTGGGATCCACACAATGGAGACCTTCTGAT...GATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CAA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCCTCCTCCAGCAAATATaGGAGTGGGCGAGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: IITFKLPDTILLETLFHILLQQI*EWARET Trigger: TGTTTCCCTCGCCCACTCCAATATTTGCTGGAGGAG...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CAA 90 bp | TTCACACCATCTATCCTGACCAATTCCATTTCCTATGAGGCAATTCATCTCATCTCACCCATCGGTCATTaGCTCCTCCAGCAAATATTG | + |
|
Preference number: 5 (lower is better) Translates to: FTPSILTNSISYEAIHLISPIGH*LLQQIL Trigger: CAATATTTGCTGGAGGAGCAAATGACCGATGGGTGA...GATGAGATGAATTGCCTCATAGGAAATGGAATTGGTCAGGATAGATGGTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CAA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCTTGAAGGCTAGGGACTaGCCTTGGAGTGGCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IITFKLPDTILLETLFHILKARD*PWSGPK Trigger: TTTTGGGCCACTCCAAGGCAAGTCCCTAGCCTTCAA...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
||
| CDS-3UTR CAA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACGCACAGCAAAGACCATaGCTCAAAGGTGCAACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDAQQRP*LKGATC Trigger: ACAAGTTGCACCTTTGAGCAATGGTCTTTGCTGTGC...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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| CDS-3UTR CAA 90 bp | ACATCCAAAACCTCTTATCAGTTTCACACCATCTATCCTGACCAATTCCATTTCCAGTTTTTGGACTTCTaGGGTGGACATCACTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: TSKTSYQFHTIYPDQFHFQFLDF*GGHHSS Trigger: CGAAGAGTGATGTCCACCCAAGAAGTCCAAAAACTG...GAAATGGAATTGGTCAGGATAGATGGTGTGAAACTGATAAGAGGTTTTGGATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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| CDS-3UTR CAA 90 bp | TACGTACAGTACACCTTGCAGCCGAATGCAAGGTTACTTCATCCTATGGTAAAGCATTACTGTTTTGTCTaGCCAATTTTAGACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: YVQYTLQPNARLLHPMVKHYCFV*PILDSL Trigger: CAAGCTGTCTAAAATTGGCAAGACAAAACAGTAATG...CTTTACCATAGGATGAAGTAACCTTGCATTCGGCTGCAAGGTGTACTGTACGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| CDS-3UTR CAA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACCACACTCTTAGAGTTTaGTCTCTTGAAGCTGATACA | + |
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Preference number: 5 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDHTLRV*SLEADT Trigger: TGTATCAGCTTCAAGAGACAAAACTCTAAGAGTGTG...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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| CDS-3UTR CAA 90 bp | ATCATGGTGATGACCTTCCAGCTTCCTAATCATGGTGTATTTATCCATATTCCACACACTCTTAGAGTTTaGTCTCTTGAAGCTGATACA | + |
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Preference number: 5 (lower is better) Translates to: IMVMTFQLPNHGVFIHIPHTLRV*SLEADT Trigger: TGTATCAGCTTCAAGAGACAAAACTCTAAGAGTGTG...TGGAATATGGATAAATACACCATGATTAGGAAGCTGGAAGGTCATCACCATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131818.8 |
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| CDS-3UTR CAA 90 bp | AAGAATAAGAGTGGATTCCAATTAAATAAATCTGCTGAGCCTCCAAGGACAGACACATCACTCTTCGGATaGACATGCGACATATATGTT | + |
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Preference number: 5 (lower is better) Translates to: KNKSGFQLNKSAEPPRTDTSLFG*TCDIYV Trigger: AACATATATGTCGCATGTCAATCCGAAGAGTGATGT...GTCTGTCCTTGGAGGCTCAGCAGATTTATTTAATTGGAATCCACTCTTATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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| CDS-3UTR CAA 90 bp | ATCATCACATTCAAACTCCCAGACACCATTCTTTTGGAAACTCTTTTTCACATCCATTACTGTTTTGTCTaGCCAATTTTAGACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: IITFKLPDTILLETLFHIHYCFV*PILDSL Trigger: CAAGCTGTCTAAAATTGGCAAGACAAAACAGTAATG...GATGTGAAAAAGAGTTTCCAAAAGAATGGTGTCTGGGAGTTTGAATGTGATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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| CDS TCA 72 bp | GGACCACGGGACAAGCTTCACTATGCGATATCCTTGTaGCCACGCAAAGTAGGAACCATCAGGAGCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GPRDKLHYAISL*PRKVGTIRSKS Trigger: GCTTTTGCTCCTGATGGTTCCTACTTTGCGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCCCGTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017821.12 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| CDS GCA 72 bp | TCTTACGGCACTGGGACCACGGGACAAGCTTCACTATaGGATATCCTTGTGACCACGCAAAGTAGGAACCAT | + |
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Preference number: 6 (lower is better) Translates to: SYGTGTTGQASL*DILVTTQSRNH Trigger: ATGGTTCCTACTTTGCGTGGTCACAAGGATATCGCATAGTGAAGCTTGTCCCGTGGTCCCAGTGCCGTAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017821.12 ENSMUST00000131848.8 ENSMUST00000145772.8 |
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| CDS TCA 72 bp | CATATTCCAAAGGAAAACTGCTTTACTGGCGCCAACTaGACACAGCATAGAACAGTCGGGAGAGAATGCACA | + |
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Preference number: 6 (lower is better) Translates to: HIPKENCFTGAN*TQHRTVGRECT Trigger: TGTGCATTCTCTCCCGACTGTTCTATGCTGTGTTCAGTTGGCGCCAGTAAAGCAGTTTTCCTTTGGAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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| CDS CCA 72 bp | TTTTTGGAACCATGCAAAAGAAAGTTCTTACGGCACTaGGACCACGGGACAAGCTTCACTATGCGATATCCT | + |
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Preference number: 6 (lower is better) Translates to: FLEPCKRKFLRH*DHGTSFTMRYP Trigger: AGGATATCGCATAGTGAAGCTTGTCCCGTGGTCCCAGTGCCGTAAGAACTTTCTTTTGCATGGTTCCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017821.12 |
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