Pregenerated sensors for WRNIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021400Ensembl transcript IDs: ENSMUST00000021832.7, ENSMUST00000229351.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAGGGCCTAGAGGCAATGTGGATGCAGGCATTATGAAGTTCTCTCTTCCCAAATTCTTCACAGACTCCTaGGGACCACCTGAGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RGPRGNVDAGIMKFSLPKFFTDS*GPPEPH Trigger: GTGAGGCTCAGGTGGTCCTCAGGAGTCTGTGAAGAA...TTTGGGAAGAGAGAACTTCATAATGCCTGCATCCACATTGCCTCTAGGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229351.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGCAGGCATTATGAAGTTCTCTCTTCCCAAATGACTCCAGTGTGTAGGTTGGCCTCACAGCTCTGGTaGATGGCCTTTTTCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GCRHYEVLSSQMTPVCRLASQLW*MAFFLS Trigger: AGAAAGGAAAAAGGCCATTCACCAGAGCTGTGAGGC...CAACCTACACACTGGAGTCATTTGGGAAGAGAGAACTTCATAATGCCTGCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229351.2 |
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| 3UTR-3UTR CCA 90 bp | TCATGTAACTTTCTAACACTGCTTTCTTCACAGACTCCTGAGGACCACCTGAGCCACAGCTCTGGTGAATaGCCTTTTTCCTTTCTAATG | + |
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Preference number: 2 (lower is better) Translates to: SCNFLTLLSSQTPEDHLSHSSGE*PFSFLM Trigger: CATTAGAAAGGAAAAAGGCCATTCACCAGAGCTGTG...GCTCAGGTGGTCCTCAGGAGTCTGTGAAGAAAGCAGTGTTAGAAAGTTACATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229351.2 |
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| 3UTR CCA 72 bp | TTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTTaGCCTTCCTCAAGATACAAGCATCCTACTCATGGC | + |
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Preference number: 3 (lower is better) Translates to: FPRQPTPRSSDF*PSSRYKHPTHG Trigger: GCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCGTCGGGGTGGCGGGCTaGTTCAGCGCCGAGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSVGVAG*FSAELS Trigger: GGAGAGCTCGGCGCTGAAGCAGCCCGCCACCCCGAC...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCGCTGGGCGTGGGCGGTaGGTCGTAGCTCTCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSAGRGR*VVALTA Trigger: AGCCGTGAGAGCTACGACGCACCGCCCACGCCCAGC...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGAGGCGCGTTCCTCAGGTaGAGGGGTACAGGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRGAFLR*RGTGGR Trigger: CCTGCCTCCTGTACCCCTGCACCTGAGGAACGCGCC...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR TCA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCGGTCCAGGTGCGAATTaGTGTGCGCGGCGGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSGPGAN*CARRAS Trigger: TGATGCCCGCCGCGCACATCAATTCGCACCTGGACC...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCAGGCAGCGGTCCAGGTaGGAATTGATGTGCGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSRQRSR*ELMCAA Trigger: CGCCGCGCACATCAATTCGCACCTGGACCGCTGCCT...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGAGCGGGCATCATCTGCTaGCACACTGGGCACTGCACC | + |
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Preference number: 4 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRAGIIC*HTGHCT Trigger: GGTGCAGTGCCCAGTGTGCCAGCAGATGATGCCCGC...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGAGGCCGATGTCCTCGCTaGCAAACCTTACCAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRGRCPR*QTLPAS Trigger: GGAGGCTGGTAAGGTTTGCCAGCGAGGACATCGGCC...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAACCTTTCTGGCGGGGCTaGTGGAGCGGGCCACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKPFWRG*WSGPPG Trigger: TCCCGGTGGCCCGCTCCAGCAGCCCCGCCAGAAAGG...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGACAGAGGGCTCAGAGCTaGAGTTGCTGCTGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRQRAQS*SCCCGS Trigger: TGAGCCACAGCAGCAACTGCAGCTCTGAGCCCTCTG...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATGCGCACCGCTGGGCGTaGGCGGTGCGTCGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYAHRWA*AVRRSS Trigger: AGAGCTACGACGCACCGCCCACGCCCAGCGGTGCGC...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTTTCTGGCGGGGCTGCTaGAGCGGGCCACCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFFWRGC*SGPPGS Trigger: ACTTCCCGGTGGCCCGCTCCAGCAGCCCCGCCAGAA...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGACCTGGCCACATAGAGTaGGTCCTCTCCTCCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRPGHIE*VLSSLK Trigger: CTTGAGGGAGGAGAGGACCCACTCTATGTGGCCAGG...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR TCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTGGCAGGGGCCCCTGGTaGCTCCGCAGACAGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFGRGPW*LRRQAF Trigger: AAAAGCCTGTCTGCGGAGTCACCAGGGGCCCCTGCC...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTGCGGCGGGCATCATCTaGTGGCACACTGGGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFAAGII*WHTGHC Trigger: GCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGC...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTTCCCCATACCCTTTCTaGCGGGGCTGCTGGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFSPYPF*RGCWSG Trigger: CCCGCTCCAGCAGCCCCGCCAGAAAGGGTATGGGGA...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGAAGGGCGGCGTTGACTTaGAAGGAAGGGTTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRRAALT*KEGFSV Trigger: CACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCT...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCACCTTACCAGCCTCCTaGCCACATAGAGTGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSTLPAS*PHRVGP Trigger: AGGACCCACTCTATGTGGCCAGGAGGCTGGTAAGGT...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATGCAGGCATTATGAAGTTCTCTCTTCCCAAATGACTCCAGTGTGTAGGCAGAGCTGCAGTTGCTaGTGTGGCTCAGAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: CGCRHYEVLSSQMTPVCRQSCSC*CGSEGQ Trigger: CTGACCCTCTGAGCCACAGCAGCAACTGCAGCTCTG...CCTACACACTGGAGTCATTTGGGAAGAGAGAACTTCATAATGCCTGCATCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229351.2 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTGGCGGCTGCAGCCGCTaGTCTCTTCCCCATACCCTT | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFGGCSR*SLPHTL Trigger: AAGGGTATGGGGAAGAGACCAGCGGCTGCAGCCGCC...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCTACAGGGAAGCATTCTaGTCAGAGCCACGCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSYREAF*SEPRIA Trigger: GGCTATGCGTGGCTCTGACCAGAATGCTTCCCTGTA...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATGGGCACTGCACCTGGTaGAACTGCGACAGGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYGHCTW*NCDRKG Trigger: CCCCTTCCTGTCGCAGTTGCACCAGGTGCAGTGCCC...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATGCAGGCATTATGAAGTTCTCTCTTCCCAAATGACTCCAGTGTGTAGGCTGCAGTTGCTGCTGTaGCTCAGAGGGTCAGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: CGCRHYEVLSSQMTPVCRLQLLL*LRGSVG Trigger: TCCTACTGACCCTCTGAGCCACAGCAGCAACTGCAG...CCTACACACTGGAGTCATTTGGGAAGAGAGAACTTCATAATGCCTGCATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229351.2 |
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| CDS-3UTR GCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTAGGTGCGAATTGATGTaGGCGGCGGGCATCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFRCELM*AAGIIC Trigger: GCAGATGATGCCCGCCGCGCACATCAATTCGCACCT...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTGTCAGCCAGCGGCTTaGCCTCCAGCATCTGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYCQPAA*PPASVG Trigger: TCCGACAGATGCTGGAGGGCAAGCCGCTGGCTGACA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTGTCCTGCAGCGTGTCTaGACGCATCTTGTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFVLQRV*THLVSQ Trigger: CTGGCTGACAAGATGCGTCCAGACACGCTGCAGGAC...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAACCTTCATCAGCCTGGTaGGCGCGTTCCTCAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKPSSAW*ARSSGA Trigger: TGCACCTGAGGAACGCGCCCACCAGGCTGATGAAGG...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAATGCACCTGGTGCAACTaGGACAGGAAGGGGTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKCTWCN*DRKGSS Trigger: AGACGACCCCTTCCTGTCGCAGTTGCACCAGGTGCA...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATCAGAGCTGCAGTTGCTaGTGTGGCTCAGAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYQSCSC*CGSEGQ Trigger: CTGACCCTCTGAGCCACAGCAGCAACTGCAGCTCTG...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATACTGGGCACTGCACCTaGTGCAACTGCGACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYTGHCT*CNCDRK Trigger: CTTCCTGTCGCAGTTGCACCAGGTGCAGTGCCCAGT...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATCATCTGCTGGCACACTaGGCACTGCACCTGGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYHLLAH*ALHLVQ Trigger: TTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGATG...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCCTGGAGTCTAGGACATaGATTCCCAGTGAGTTGATT | + |
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Preference number: 4 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSLESRT*IPSELI Trigger: AATCAACTCACTGGGAATCCATGTCCTAGACTCCAG...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR TCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTCAGAAGGGCGGCGTTaGCTTGGAAGGAAGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYSEGRR*LGRKGS Trigger: AGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR TCA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGAGGATTCCCAGTGAGTTaGTTGCTCTCATTAAAATCG | + |
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Preference number: 4 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRGFPVS*LLSLKS Trigger: CGATTTTAATGAGAGCAATCAACTCACTGGGAATCC...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATCTGCAGTTGCTGCTGTaGCTCAGAGGGTCAGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYLQLLL*LRGSVG Trigger: TCCTACTGACCCTCTGAGCCACAGCAGCAACTGCAG...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAAATCCTTCATCAGCCTaGTGGGCGCGTTCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKNPSSA*WARSSG Trigger: ACCTGAGGAACGCGCCCACCAGGCTGATGAAGGATT...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATCACTGTACACCTCAATaGACTTTGGGGCTCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYHCTPQ*TLGLWQ Trigger: TTGCCAGAGCCCCAAAGTCCATTGAGGTGTACAGTG...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTCAGGCTCACTGTACATaGGGTTGTACTTGTACCCTT | + |
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Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFQAHCT*GCTCTL Trigger: AAGGGTACAAGTACAACCCCATGTACAGTGAGCCTG...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR TCA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAACTGCTTTATCTTCTATaGAGACAGAGGGCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKLLYLL*RQRAQS Trigger: GCTCTGAGCCCTCTGTCTTCATAGAAGATAAAGCAG...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR GCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTGTGTAGGGCAGAGATaGAGTTGTAGTGCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYCVGQR*SCSALL Trigger: GAGAAGAGCACTACAACTGCATCTCTGCCCTACACA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAACGGTCATATAAAATGTaGGACCGCTGTAGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKRSYKM*DRCRPS Trigger: AGAAGGCCTACAGCGGTCCCACATTTTATATGACCG...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTGGACTTTGGGGCTCTaGCAAAATAGACCACACACT | + |
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Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYWTLGL*QNRPHT Trigger: AGTGTGTGGTCTATTTTGCCAGAGCCCCAAAGTCCA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR TCA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTCTGAGCCTGCTTTATaGCATCTCGCACATCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYSEPAL*HLAHHL Trigger: CAAATGATGTGCGAGATGTCATAAAGCAGGCTCAGA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR TCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTAAGCTCTTCTCATTCTaGGCCTGCTTTATGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFKLFSF*ACFMTS Trigger: AGATGTCATAAAGCAGGCTCAGAATGAGAAGAGCTT...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR GCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTTGTACTTGTACCCTTTaGCATAGCCCAAATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFCTCTL*HSPNPS Trigger: TGAAGGATTTGGGCTATGGCAAAGGGTACAAGTACA...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTCACCATTGCCTCTACTaGAAGCTTCTCAAGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFHHCLY*KLLKNN Trigger: ATTGTTCTTGAGAAGCTTCCAGTAGAGGCAATGGTG...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| 3UTR CAA 72 bp | GAAGTTCTCTCTTCCCAAATGACTCCAGTGTGTAGGTaGACAAAAATGCAAGGACACTACAGTTCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVLSSQMTPVCR*TKMQGHYSSHH Trigger: ATGATGAGAACTGTAGTGTCCTTGCATTTTTGTCAACCTACACACTGGAGTCATTTGGGAAGAGAGAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229351.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTCCTGCTGAGATTTATTaGAGCGATGAATCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFPAEIY*SDESHQ Trigger: TTGATGAGATTCATCGCTTCAATAAATCTCAGCAGG...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR GCA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAACAAACCTTATGCTGTaGTTCTTGCTGTTGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKTNLML*FLLLLA Trigger: AGCCAACAACAGCAAGAAGCACAGCATAAGGTTTGT...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR GCA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTATGTCACAAACCTTATaGTGTGCTTCTTGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFMSQTL*CASCCC Trigger: ACAACAGCAAGAAGCACAGCATAAGGTTTGTGACAT...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS TCA 90 bp | GGATCTCCTCCGCCGCCAGCGCCCGGGGATGCGCGCGGCCCGCGCTaGCTCCGAACGAGGCGTCGGCGGCGTCCGCATCCCAGTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPPPPAPGDARGPR*LRTRRRRRPHPSAR Trigger: CCGGGCACTGGGATGCGGACGCCGCCGACGCCTCGTTCGGAGTCAGCGCGGGCCGCGCGCATCCCCGGGCGCTGGCGGCGGAGGAGATCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | CCCTCCAGCATCTGTCGGATCTCCTCCGCCGCCAGCGCCCGGGGATaGGCGCGGCCCGCGCTGACTCCGAACGAGGCGTCGGCGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSSICRISSAASARG*ARPALTPNEASAAS Trigger: GGACGCCGCCGACGCCTCGTTCGGAGTCAGCGCGGGCCGCGCGCATCCCCGGGCGCTGGCGGCGGAGGAGATCCGACAGATGCTGGAGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | TCTCCGACAGTCGACGCCTCTTGGCGCCGGGTGGCGAGGGCCCCTTaGCCCGCTCCCCAGCGCGGTGAGAGCCGGCCGCTGGCTCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SPTVDASWRRVARAP*PAPQRGESRPLAPR Trigger: ACGCGGAGCCAGCGGCCGGCTCTCACCGCGCTGGGGAGCGGGCCAAGGGGCCCTCGCCACCCGGCGCCAAGAGGCGTCGACTGTCGGAGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | CTTCAGCGCCGAGCTCTCCGACAGTCGACGCCTCTTGGCGCCGGGTaGCGAGGGCCCCTTGGCCCGCTCCCCAGCGCGGTGAGAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQRRALRQSTPLGAG*RGPLGPLPSAVRAG Trigger: GCCGGCTCTCACCGCGCTGGGGAGCGGGCCAAGGGGCCCTCGCCACCCGGCGCCAAGAGGCGTCGACTGTCGGAGAGCTCGGCGCTGAAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | TCTCGGTCTCGCCGCCGTCATCGCCCTCCTCGCCCTCGCCTTCGCTaGTTTCGGCCGCCGTCGGGGTGGCGGGCTGCTTCAGCGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSRRRHRPPRPRLR*FRPPSGWRAASAPS Trigger: GCTCGGCGCTGAAGCAGCCCGCCACCCCGACGGCGGCCGAAAGCAGCGAAGGCGAGGGCGAGGAGGGCGATGACGGCGGCGAGACCGAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | TCGCCCTCGCCTTCGCTGCTTTCGGCCGCCGTCGGGGTGGCGGGCTaGTTCAGCGCCGAGCTCTCCGACAGTCGACGCCTCTTGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPSLLSAAVGVAG*FSAELSDSRRLLAP Trigger: CGGCGCCAAGAGGCGTCGACTGTCGGAGAGCTCGGCGCTGAAGCAGCCCGCCACCCCGACGGCGGCCGAAAGCAGCGAAGGCGAGGGCGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | CGCCCTCCTCGCCCTCGCCTTCGCTGCTTTCGGCCGCCGTCGGGGTaGCGGGCTGCTTCAGCGCCGAGCTCTCCGACAGTCGACGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPPRPRLRCFRPPSG*RAASAPSSPTVDAS Trigger: AGAGGCGTCGACTGTCGGAGAGCTCGGCGCTGAAGCAGCCCGCCACCCCGACGGCGGCCGAAAGCAGCGAAGGCGAGGGCGAGGAGGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | CACCGGGAAGTCCGGGATAAGGCGCGCACCGCTGGGCGTGGGCGGTaGGTCGTAGCTCTCACGGCTCTCGGTCTCGCCGCCGTCATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HREVRDKARTAGRGR*VVALTALGLAAVIA Trigger: GGCGATGACGGCGGCGAGACCGAGAGCCGTGAGAGCTACGACGCACCGCCCACGCCCAGCGGTGCGCGCCTTATCCCGGACTTCCCGGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | GGCTCCGCGTGCCCCGCAGGGTGCAGCAGCAGGCAGCGGTCCAGGTaGGAATTGATGTGCGCGGCGGGCATCATCTGCTGGCACACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSACPAGCSSRQRSR*ELMCAAGIICWHTG Trigger: CCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTGCCTGCTGCTGCACCCTGCGGGGCACGCGGAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | TGTAGTCCTGCAGCGTGTCTGGACGCATCTTGTCAGCCAGCGGCTTaGCCTCCAGCATCTGTCGGATCTCCTCCGCCGCCAGCGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSPAACLDASCQPAA*PPASVGSPPPPAPG Trigger: CCCGGGCGCTGGCGGCGGAGGAGATCCGACAGATGCTGGAGGGCAAGCCGCTGGCTGACAAGATGCGTCCAGACACGCTGCAGGACTACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | CAGCGGTCCAGGTGCGAATTGATGTGCGCGGCGGGCATCATCTGCTaGCACACTGGGCACTGCACCTGGTGCAACTGCGACAGGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRSRCELMCAAGIIC*HTGHCTWCNCDRKG Trigger: CCCCTTCCTGTCGCAGTTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | AGGCAGCGGTCCAGGTGCGAATTGATGTGCGCGGCGGGCATCATCTaGTGGCACACTGGGCACTGCACCTGGTGCAACTGCGACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQRSRCELMCAAGII*WHTGHCTWCNCDRK Trigger: CTTCCTGTCGCAGTTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | CTGCCCTACGGCCCTACTCTGCCCGATGTAGTCCTGCAGCGTGTCTaGACGCATCTTGTCAGCCAGCGGCTTGCCCTCCAGCATCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPYGPTLPDVVLQRV*THLVSQRLALQHLS Trigger: CGACAGATGCTGGAGGGCAAGCCGCTGGCTGACAAGATGCGTCCAGACACGCTGCAGGACTACATCGGGCAGAGTAGGGCCGTAGGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | CAGGTGCGAATTGATGTGCGCGGCGGGCATCATCTGCTGGCACACTaGGCACTGCACCTGGTGCAACTGCGACAGGAAGGGGTCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVRIDVRGGHHLLAH*ALHLVQLRQEGVVF Trigger: GAAGACGACCCCTTCCTGTCGCAGTTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | GATCTGCCAGGCCGATGTCCTCGCTGGCAAACCTTACCAGCCTCCTaGCCACATAGAGTGGGTCCTCTCCTCCCTCAAGCATCCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DLPGRCPRWQTLPAS*PHRVGPLLPQASGP Trigger: TGGCCCGGATGCTTGAGGGAGGAGAGGACCCACTCTATGTGGCCAGGAGGCTGGTAAGGTTTGCCAGCGAGGACATCGGCCTGGCAGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | GCTGTTGTTGGCTATGATGTGAGCCAAGGTGGTCTTACCGCAACCTaGCGGGCCCCACAAGATGAGCGAAGGGATCTCATTGGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVVGYDVSQGGLTAT*RAPQDERRDLIGLQ Trigger: CTGGAGGCCAATGAGATCCCTTCGCTCATCTTGTGGGGCCCGCCAGGTTGCGGTAAGACCACCTTGGCTCACATCATAGCCAACAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 90 bp | CTGCTTGTGCTAATGCTGATGGATCTGCCAGGCCGATGTCCTCGCTaGCAAACCTTACCAGCCTCCTGGCCACATAGAGTGGGTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLVLMLMDLPGRCPR*QTLPASWPHRVGPL Trigger: GAGAGGACCCACTCTATGTGGCCAGGAGGCTGGTAAGGTTTGCCAGCGAGGACATCGGCCTGGCAGATCCATCAGCATTAGCACAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 90 bp | TCTCCTCCCTCAAGCATCCGGGCCAGCCAATACAGGGAAGCATTCTaGTCAGAGCCACGCATAGCCTTGTGTAGGGCAGAGATGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPPSSIRASQYREAF*SEPRIALCRAEMQL Trigger: CAACTGCATCTCTGCCCTACACAAGGCTATGCGTGGCTCTGACCAGAATGCTTCCCTGTATTGGCTGGCCCGGATGCTTGAGGGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CAA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCCGGTCCAGGTGCGAATaGATGTGCGCGGCGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSRSRCE*MCAAGI Trigger: GATGCCCGCCGCGCACATCAATTCGCACCTGGACCG...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS GCA 90 bp | CCTGGTCCACAGGCTCACTGTACATGGGGTTGTACTTGTACCCTTTaGCATAGCCCAAATCCTTCATCAGCCTGGTGGGCGCGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPQAHCTWGCTCTL*HSPNPSSAWWARSS Trigger: TGAGGAACGCGCCCACCAGGCTGATGAAGGATTTGGGCTATGGCAAAGGGTACAAGTACAACCCCATGTACAGTGAGCCTGTGGACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 90 bp | TCAAGAACAATTACCCGACAGCGGCTCAGAAGGGCGGCGTTGACTTaGAAGGAAGGGTTCTCAGTGGTCGCACCAATCAGCGTGATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRTITRQRLRRAALT*KEGFSVVAPISVIV Trigger: GACAATCACGCTGATTGGTGCGACCACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAGCCGCTGTCGGGTAATTGTTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS TCA 90 bp | GTCACAAACCTTATGCTGTGCTTCTTGCTGTTGTTGGCTATGATGTaGGCCAAGGTGGTCTTACCGCAACCTGGCGGGCCCCACAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VTNLMLCFLLLLAMM*AKVVLPQPGGPHKM Trigger: CATCTTGTGGGGCCCGCCAGGTTGCGGTAAGACCACCTTGGCTCACATCATAGCCAACAACAGCAAGAAGCACAGCATAAGGTTTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGACTCAGAAGGGCGGCGTaGACTTGGAAGGAAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRLRRAA*TWKEGF Trigger: GAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAG...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | TCAGCTCCTCAGGCAGGTAGTCCTGGTCCACAGGCTCACTGTACATaGGGTTGTACTTGTACCCTTTGCCATAGCCCAAATCCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SAPQAGSPGPQAHCT*GCTCTLCHSPNPSS Trigger: TGATGAAGGATTTGGGCTATGGCAAAGGGTACAAGTACAACCCCATGTACAGTGAGCCTGTGGACCAGGACTACCTGCCTGAGGAGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS TCA 90 bp | ATAATGTCACAAACCTTATGCTGTGCTTCTTGCTGTTGTTGGCTATaGTGTGAGCCAAGGTGGTCTTACCGCAACCTGGCGGGCCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IMSQTLCCASCCCWL*CEPRWSYRNLAGPT Trigger: TGTGGGGCCCGCCAGGTTGCGGTAAGACCACCTTGGCTCACATCATAGCCAACAACAGCAAGAAGCACAGCATAAGGTTTGTGACATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTGTGTCTGGACGCATCTaGTCAGCCAGCGGCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFVSGRI*SASGLP Trigger: GGGCAAGCCGCTGGCTGACAAGATGCGTCCAGACAC...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | CTGCTGTGGCTCAGAGGGTCAGTAGGACGGCTGGAGTCTAGGACATaGATTCCCAGTGAGTTGATTGCTCTCATTAAAATCGTCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: LLWLRGSVGRLESRT*IPSELIALIKIVTI Trigger: AATGGTGACGATTTTAATGAGAGCAATCAACTCACTGGGAATCCATGTCCTAGACTCCAGCCGTCCTACTGACCCTCTGAGCCACAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | TTACATTGTTATAGGCACTGTACACCTCAATGGACTTTGGGGCTCTaGCAAAATAGACCACACACTGGGCCAGAAGCACCTCACACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LHCYRHCTPQWTLGL*QNRPHTGPEAPHTR Trigger: CCGAGTGTGAGGTGCTTCTGGCCCAGTGTGTGGTCTATTTTGCCAGAGCCCCAAAGTCCATTGAGGTGTACAGTGCCTATAACAATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTTGTCAGCCAGCGGCTaGCCCTCCAGCATCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYLSASG*PSSICR Trigger: CCGACAGATGCTGGAGGGCAAGCCGCTGGCTGACAA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS CCA 90 bp | ACAGGCTTTTACATTGTTATAGGCACTGTACACCTCAATGGACTTTaGGGCTCTGGCAAAATAGACCACACACTGGGCCAGAAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGFYIVIGTVHLNGL*GSGKIDHTLGQKHL Trigger: GAGGTGCTTCTGGCCCAGTGTGTGGTCTATTTTGCCAGAGCCCCAAAGTCCATTGAGGTGTACAGTGCCTATAACAATGTAAAAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCTCACTGTACATGGGGTaGTACTTGTACCCTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSSLYMG*YLYPLP Trigger: TGGCAAAGGGTACAAGTACAACCCCATGTACAGTGA...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCCATCTCGCACATCATTaGTCTTGGCATTTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSHLAHH*SWHLLQ Trigger: CTGCAACAAATGCCAAGACAAATGATGTGCGAGATG...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAAAGGGCGGCGTTGACTaGGAAGGAAGGGTTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKKGGVD*EGRVLS Trigger: ACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTT...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGAACTAGGAGAATAGGTTaGACCGCTCTTCTTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRTRRIG*TALLTE Trigger: TTCTGTAAGAAGAGCGGTCAAACCTATTCTCCTAGT...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCATCCTACTCATGGCCCGAGATTGTCTTGGCATTTGTaGCAGATAATGTCACAAACC | + |
|
Preference number: 5 (lower is better) Translates to: SSDFWPSSRYKHPTHGPRLSWHL*QIMSQT Trigger: GGTTTGTGACATTATCTGCAACAAATGCCAAGACAA...TCTCGGGCCATGAGTAGGATGCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | CCAGGCAACCAACTCCAAGATCCAGTGACTTTTGGCCTTCCTCAAGATACAAGCAGGATGGTTTTCCTTTaGAAAAAGCTCTTCTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PGNQLQDPVTFGLPQDTSRMVFL*KKLFSF Trigger: GAATGAGAAGAGCTTTTTCAAAAGGAAAACCATCCT...GCTTGTATCTTGAGGAAGGCCAAAAGTCACTGGATCTTGGAGTTGGTTGCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGTCTATTTTTAATGTTCCCCAGGCAACCAACTCCAAGATCCAGTGACTTTCTTATGCTGTGCTTCTaGCTGTTGTTGGCTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VGLFLMFPRQPTPRSSDFLMLCF*LLLAMM Trigger: CATCATAGCCAACAACAGCAAGAAGCACAGCATAAG...AAAGTCACTGGATCTTGGAGTTGGTTGCCTGGGGAACATTAAAAATAGACCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
||
| CDS-3UTR CAA 90 bp | CATTTAGCTGAAGTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAATATAAAGTGACAGCCTaGGTAGGCAGCAACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLAEVTTSIYGTLNFWHKYKVTA*VGSNCL Trigger: CAAGCAGTTGCTGCCTACCAAGGCTGTCACTTTATA...TTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTACTTCAGCTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CAA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTTAAAATCGTCACCATaGCCTCTACTGGAAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYLKSSP*PLLEAS Trigger: AGAAGCTTCCAGTAGAGGCAATGGTGACGATTTTAA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CAA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATTGGATTCCCAGTGAGTaGATTGCTCTCATTAAAATC | + |
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Preference number: 5 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYWIPSE*IALIKI Trigger: GATTTTAATGAGAGCAATCAACTCACTGGGAATCCA...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS-3UTR CAA 90 bp | GTAACCACCTCCATCTATGGAACCCTTAATTTCTGGCACAAAATGTTGGTCTATCATTTGTCTTGGCATTaGTTGCAGATAATGTCACAA | + |
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Preference number: 5 (lower is better) Translates to: VTTSIYGTLNFWHKMLVYHLSWH*LQIMSQ Trigger: TTGTGACATTATCTGCAACAAATGCCAAGACAAATG...ATAGACCAACATTTTGTGCCAGAAATTAAGGGTTCCATAGATGGAGGTGGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | GTCGACGCCTCTTGGCGCCGGGTGGCGAGGGCCCCTTaGCCCGCTCCCCAGCGCGGTGAGAGCCGGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: VDASWRRVARAP*PAPQRGESRPL Trigger: CAGCGGCCGGCTCTCACCGCGCTGGGGAGCGGGCCAAGGGGCCCTCGCCACCCGGCGCCAAGAGGCGTCGAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | CGAGCTCTCCGACAGTCGACGCCTCTTGGCGCCGGGTaGCGAGGGCCCCTTGGCCCGCTCCCCAGCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: RALRQSTPLGAG*RGPLGPLPSAV Trigger: CACCGCGCTGGGGAGCGGGCCAAGGGGCCCTCGCCACCCGGCGCCAAGAGGCGTCGACTGTCGGAGAGCTCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | CGCCGCCGTCATCGCCCTCCTCGCCCTCGCCTTCGCTaGTTTCGGCCGCCGTCGGGGTGGCGGGCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRRHRPPRPRLR*FRPPSGWRAAS Trigger: TGAAGCAGCCCGCCACCCCGACGGCGGCCGAAAGCAGCGAAGGCGAGGGCGAGGAGGGCGATGACGGCGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | GCTTCAGCGCCGAGCTCTCCGACAGTCGACGCCTCTTaGCGCCGGGTGGCGAGGGCCCCTTGGCCCGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ASAPSSPTVDAS*RRVARAPWPAP Trigger: GGGAGCGGGCCAAGGGGCCCTCGCCACCCGGCGCCAAGAGGCGTCGACTGTCGGAGAGCTCGGCGCTGAAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | GTCCGGGATAAGGCGCGCACCGCTGGGCGTGGGCGGTaGGTCGTAGCTCTCACGGCTCTCGGTCTCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: VRDKARTAGRGR*VVALTALGLAA Trigger: GGCGGCGAGACCGAGAGCCGTGAGAGCTACGACGCACCGCCCACGCCCAGCGGTGCGCGCCTTATCCCGGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | CGCCCTCGCCTTCGCTGCTTTCGGCCGCCGTCGGGGTaGCGGGCTGCTTCAGCGCCGAGCTCTCCGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: RPRLRCFRPPSG*RAASAPSSPTV Trigger: GACTGTCGGAGAGCTCGGCGCTGAAGCAGCCCGCCACCCCGACGGCGGCCGAAAGCAGCGAAGGCGAGGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 72 bp | TGCTTCAGCGCCGAGCTCTCCGACAGTCGACGCCTCTaGGCGCCGGGTGGCGAGGGCCCCTTGGCCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CFSAELSDSRRL*APGGEGPLARS Trigger: GGAGCGGGCCAAGGGGCCCTCGCCACCCGGCGCCAAGAGGCGTCGACTGTCGGAGAGCTCGGCGCTGAAGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | CCTTCGCTGCTTTCGGCCGCCGTCGGGGTGGCGGGCTaGTTCAGCGCCGAGCTCTCCGACAGTCGACGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSLLSAAVGVAG*FSAELSDSRRL Trigger: GAGGCGTCGACTGTCGGAGAGCTCGGCGCTGAAGCAGCCCGCCACCCCGACGGCGGCCGAAAGCAGCGAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | CGGCTGCAGCCGCTGGTCTCTTCCCCATACCCTTTCTaGCGGGGCTGCTGGAGCGGGCCACCGGGAAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: RLQPLVSSPYPF*RGCWSGPPGSP Trigger: CGGACTTCCCGGTGGCCCGCTCCAGCAGCCCCGCCAGAAAGGGTATGGGGAAGAGACCAGCGGCTGCAGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 90 bp | GCGTGCCCCGCAGGGTGCAGCAGCAGGCAGCGGTCCAGGTGCGAATaGATGTGCGCGGCGGGCATCATCTGCTGGCACACTGGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: ACPAGCSSRQRSRCE*MCAAGIICWHTGHC Trigger: GCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTGCCTGCTGCTGCACCCTGCGGGGCACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | TGCCCCGCAGGGTGCAGCAGCAGGCAGCGGTCCAGGTaGGAATTGATGTGCGCGGCGGGCATCATCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CPAGCSSRQRSR*ELMCAAGIICW Trigger: CCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTGCCTGCTGCTGCACCCTGCGGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS TCA 72 bp | CAGGGTGCAGCAGCAGGCAGCGGTCCAGGTGCGAATTaGTGTGCGCGGCGGGCATCATCTGCTGGCACACTG | + |
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Preference number: 6 (lower is better) Translates to: QGAAAGSGPGAN*CARRASSAGTL Trigger: CAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTGCCTGCTGCTGCACCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | ATCTGCTGGCACACTGGGCACTGCACCTGGTGCAACTaGGACAGGAAGGGGTCGTCTTCCGGCCCGCTCACC | + |
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Preference number: 6 (lower is better) Translates to: ICWHTGHCTWCN*DRKGSSSGPLT Trigger: GGTGAGCGGGCCGGAAGACGACCCCTTCCTGTCGCAGTTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | TGCAGCAGCAGGCAGCGGTCCAGGTGCGAATTGATGTaGGCGGCGGGCATCATCTGCTGGCACACTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: CSSRQRSRCELM*AAGIICWHTGH Trigger: GTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTGCCTGCTGCTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | GCAGCGTGTCTGGACGCATCTTGTCAGCCAGCGGCTTaGCCTCCAGCATCTGTCGGATCTCCTCCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: AACLDASCQPAA*PPASVGSPPPP Trigger: TGGCGGCGGAGGAGATCCGACAGATGCTGGAGGGCAAGCCGCTGGCTGACAAGATGCGTCCAGACACGCTGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 72 bp | GCAGGGTGCAGCAGCAGGCAGCGGTCCAGGTGCGAATaGATGTGCGCGGCGGGCATCATCTGCTGGCACACT | + |
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Preference number: 6 (lower is better) Translates to: AGCSSRQRSRCE*MCAAGIICWHT Trigger: AGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGACCGCTGCCTGCTGCTGCACCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 72 bp | TGCAGCGTGTCTGGACGCATCTTGTCAGCCAGCGGCTaGCCCTCCAGCATCTGTCGGATCTCCTCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: CSVSGRILSASG*PSSICRISSAA Trigger: GGCGGCGGAGGAGATCCGACAGATGCTGGAGGGCAAGCCGCTGGCTGACAAGATGCGTCCAGACACGCTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | GGCCCTACTCTGCCCGATGTAGTCCTGCAGCGTGTCTaGACGCATCTTGTCAGCCAGCGGCTTGCCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPTLPDVVLQRV*THLVSQRLALQ Trigger: CTGGAGGGCAAGCCGCTGGCTGACAAGATGCGTCCAGACACGCTGCAGGACTACATCGGGCAGAGTAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 90 bp | TTACCGCAACCTGGCGGGCCCCACAAGATGAGCGAAGGGATCTCATaGGCCTCCAGTAGCGAGCGGAGCAGAGTCTCCTGCCCTACGGCC | + |
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Preference number: 6 (lower is better) Translates to: LPQPGGPHKMSEGIS*ASSSERSRVSCPTA Trigger: GGCCGTAGGGCAGGAGACTCTGCTCCGCTCGCTACTGGAGGCCAATGAGATCCCTTCGCTCATCTTGTGGGGCCCGCCAGGTTGCGGTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | TCCAGGTGCGAATTGATGTGCGCGGCGGGCATCATCTaGTGGCACACTGGGCACTGCACCTGGTGCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: SRCELMCAAGII*WHTGHCTWCNC Trigger: GCAGTTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | ATTGATGTGCGCGGCGGGCATCATCTGCTGGCACACTaGGCACTGCACCTGGTGCAACTGCGACAGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: IDVRGGHHLLAH*ALHLVQLRQEG Trigger: CCCTTCCTGTCGCAGTTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | AGGTGCGAATTGATGTGCGCGGCGGGCATCATCTGCTaGCACACTGGGCACTGCACCTGGTGCAACTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: RCELMCAAGIIC*HTGHCTWCNCD Trigger: GTCGCAGTTGCACCAGGTGCAGTGCCCAGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAATTCGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | GGCCGATGTCCTCGCTGGCAAACCTTACCAGCCTCCTaGCCACATAGAGTGGGTCCTCTCCTCCCTCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GRCPRWQTLPAS*PHRVGPLLPQA Trigger: TGCTTGAGGGAGGAGAGGACCCACTCTATGTGGCCAGGAGGCTGGTAAGGTTTGCCAGCGAGGACATCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | ACCCTTTGCCATAGCCCAAATCCTTCATCAGCCTGGTaGGCGCGTTCCTCAGGTGCAGGGGTACAGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TLCHSPNPSSAW*ARSSGAGVQEA Trigger: TGCCTCCTGTACCCCTGCACCTGAGGAACGCGCCCACCAGGCTGATGAAGGATTTGGGCTATGGCAAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | ATTACCCGACAGCGGCTCAGAAGGGCGGCGTTGACTTaGAAGGAAGGGTTCTCAGTGGTCGCACCAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: ITRQRLRRAALT*KEGFSVVAPIS Trigger: GCTGATTGGTGCGACCACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAGCCGCTGTCGGGTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS TCA 72 bp | GAACAATTACCCGACAGCGGCTCAGAAGGGCGGCGTTaGCTTGGAAGGAAGGGTTCTCAGTGGTCGCACCAA | + |
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Preference number: 6 (lower is better) Translates to: EQLPDSGSEGRR*LGRKGSQWSHQ Trigger: TTGGTGCGACCACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAGCCGCTGTCGGGTAATTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | ACCTTCCTAGAGCTTAACCTGGCCAGCACTGCCAGTTaGAGTCCATTCAAGCCCGTCCGGGCATCACCATCA | + |
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Preference number: 6 (lower is better) Translates to: TFLELNLASTAS*SPFKPVRASPS Trigger: TGATGGTGATGCCCGGACGGGCTTGAATGGACTGCAACTGGCAGTGCTGGCCAGGTTAAGCTCTAGGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | GGCTATGATGTGAGCCAAGGTGGTCTTACCGCAACCTaGCGGGCCCCACAAGATGAGCGAAGGGATCTCATT | + |
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Preference number: 6 (lower is better) Translates to: GYDVSQGGLTAT*RAPQDERRDLI Trigger: AATGAGATCCCTTCGCTCATCTTGTGGGGCCCGCCAGGTTGCGGTAAGACCACCTTGGCTCACATCATAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | CTAATGCTGATGGATCTGCCAGGCCGATGTCCTCGCTaGCAAACCTTACCAGCCTCCTGGCCACATAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LMLMDLPGRCPR*QTLPASWPHRV Trigger: CACTCTATGTGGCCAGGAGGCTGGTAAGGTTTGCCAGCGAGGACATCGGCCTGGCAGATCCATCAGCATTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 72 bp | AATTACCCGACAGCGGCTCAGAAGGGCGGCGTTGACTaGGAAGGAAGGGTTCTCAGTGGTCGCACCAATCAG | + |
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Preference number: 6 (lower is better) Translates to: NYPTAAQKGGVD*EGRVLSGRTNQ Trigger: CTGATTGGTGCGACCACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAGCCGCTGTCGGGTAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 72 bp | AGAACAATTACCCGACAGCGGCTCAGAAGGGCGGCGTaGACTTGGAAGGAAGGGTTCTCAGTGGTCGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RTITRQRLRRAA*TWKEGFSVVAP Trigger: TGGTGCGACCACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAGCCGCTGTCGGGTAATTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 90 bp | AGCTTCTCAAGAACAATTACCCGACAGCGGCTCAGAAGGGCGGCGTaGACTTGGAAGGAAGGGTTCTCAGTGGTCGCACCAATCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFSRTITRQRLRRAA*TWKEGFSVVAPISV Trigger: CACGCTGATTGGTGCGACCACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAGCCGCTGTCGGGTAATTGTTCTTGAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS TCA 72 bp | CTTATGCTGTGCTTCTTGCTGTTGTTGGCTATGATGTaGGCCAAGGTGGTCTTACCGCAACCTGGCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LMLCFLLLLAMM*AKVVLPQPGGP Trigger: GGGCCCGCCAGGTTGCGGTAAGACCACCTTGGCTCACATCATAGCCAACAACAGCAAGAAGCACAGCATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS TCA 72 bp | GGAAGGAAGGGTTCTCAGTGGTCGCACCAATCAGCGTaGTTGTCCCGCACTCCACGTGAGGAAGGAAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRKGSQWSHQSA*LSRTPREEGKC Trigger: ACACTTTCCTTCCTCACGTGGAGTGCGGGACAATCACGCTGATTGGTGCGACCACTGAGAACCCTTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 90 bp | CTCAAGAACAATTACCCGACAGCGGCTCAGAAGGGCGGCGTTGACTaGGAAGGAAGGGTTCTCAGTGGTCGCACCAATCAGCGTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: LKNNYPTAAQKGGVD*EGRVLSGRTNQRDC Trigger: ACAATCACGCTGATTGGTGCGACCACTGAGAACCCTTCCTTCCAAGTCAACGCCGCCCTTCTGAGCCGCTGTCGGGTAATTGTTCTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS TCA 72 bp | GCAGTCCATTCAAGCCCGTCCGGGCATCACCATCACTaGGGTAAGCCAGAGTGTCCACTGCTTTATCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: AVHSSPSGHHHH*GKPECPLLYLL Trigger: TAGAAGATAAAGCAGTGGACACTCTGGCTTACCTCAGTGATGGTGATGCCCGGACGGGCTTGAATGGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | CAGGCAGGTAGTCCTGGTCCACAGGCTCACTGTACATaGGGTTGTACTTGTACCCTTTGCCATAGCCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: QAGSPGPQAHCT*GCTCTLCHSPN Trigger: ATTTGGGCTATGGCAAAGGGTACAAGTACAACCCCATGTACAGTGAGCCTGTGGACCAGGACTACCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS TCA 72 bp | CAAACCTTATGCTGTGCTTCTTGCTGTTGTTGGCTATaGTGTGAGCCAAGGTGGTCTTACCGCAACCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QTLCCASCCCWL*CEPRWSYRNLA Trigger: CGCCAGGTTGCGGTAAGACCACCTTGGCTCACATCATAGCCAACAACAGCAAGAAGCACAGCATAAGGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | TATAGGCACTGTACACCTCAATGGACTTTGGGGCTCTaGCAAAATAGACCACACACTGGGCCAGAAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: YRHCTPQWTLGL*QNRPHTGPEAP Trigger: AGGTGCTTCTGGCCCAGTGTGTGGTCTATTTTGCCAGAGCCCCAAAGTCCATTGAGGTGTACAGTGCCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 90 bp | GGGTCAGTAGGACGGCTGGAGTCTAGGACATGGATTCCCAGTGAGTaGATTGCTCTCATTAAAATCGTCACCATTGCCTCTACTGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSVGRLESRTWIPSE*IALIKIVTIASTGS Trigger: GCTTCCAGTAGAGGCAATGGTGACGATTTTAATGAGAGCAATCAACTCACTGGGAATCCATGTCCTAGACTCCAGCCGTCCTACTGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS GCA 72 bp | GGCATCACCATCACTGAGGTAAGCCAGAGTGTCCACTaGTTTATCTTCTATGAAGACAGAGGGCTCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GITITEVSQSVH*FIFYEDRGLRA Trigger: AGCTCTGAGCCCTCTGTCTTCATAGAAGATAAAGCAGTGGACACTCTGGCTTACCTCAGTGATGGTGATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CCA 72 bp | TACATTGTTATAGGCACTGTACACCTCAATGGACTTTaGGGCTCTGGCAAAATAGACCACACACTGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: YIVIGTVHLNGL*GSGKIDHTLGQ Trigger: CTGGCCCAGTGTGTGGTCTATTTTGCCAGAGCCCCAAAGTCCATTGAGGTGTACAGTGCCTATAACAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS CAA 72 bp | GGACGGCTGGAGTCTAGGACATGGATTCCCAGTGAGTaGATTGCTCTCATTAAAATCGTCACCATTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRLESRTWIPSE*IALIKIVTIAS Trigger: AGAGGCAATGGTGACGATTTTAATGAGAGCAATCAACTCACTGGGAATCCATGTCCTAGACTCCAGCCGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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| CDS TCA 72 bp | GACGGCTGGAGTCTAGGACATGGATTCCCAGTGAGTTaGTTGCTCTCATTAAAATCGTCACCATTGCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: DGWSLGHGFPVS*LLSLKSSPLPL Trigger: TAGAGGCAATGGTGACGATTTTAATGAGAGCAATCAACTCACTGGGAATCCATGTCCTAGACTCCAGCCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021832.7 |
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