Pregenerated sensors for WNT9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018486Ensembl transcript IDs: ENSMUST00000018630.3
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGAAGGCAGAAGGGCTGGCCAACCATCTGTTGGGGAAGAGAGATaGGTCGCACACTCTTGTGCACGGCAGGTGCGTCGACAGGTGCGC | + |
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Preference number: 1 (lower is better) Translates to: GEGRRAGQPSVGEER*VAHSCARQVRRQVR Trigger: GCGCACCTGTCGACGCACCTGCCGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGATGGTTGGCCAGCCCTTCTGCCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR GCA 90 bp | TGGCCAACCATCTGTTGGGGAAGAGAGATGAGTCGCACACTCTTGTaGACGGCAGGTGCGTCGACAGGTGCGCGCTTGCGCGCTGTTCCG | + |
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Preference number: 1 (lower is better) Translates to: WPTICWGREMSRTLL*TAGASTGARLRAVP Trigger: CGGAACAGCGCGCAAGCGCGCACCTGTCGACGCACCTGCCGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGATGGTTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CCA 90 bp | AGCAGCTCCCAATCTGTTTACCCCTCCTGCCAAGCTGCGGGTGGGTaGCAAAGTCGTCCCAGAGAAGGGTCTCAGGTCACGGTGGCTCCG | + |
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Preference number: 1 (lower is better) Translates to: SSSQSVYPSCQAAGG*QSRPREGSQVTVAP Trigger: CGGAGCCACCGTGACCTGAGACCCTTCTCTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGGTAAACAGATTGGGAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR TCA 90 bp | GCTTTCCACCATCAAAGATCTTCCCAGCATGCTGCCCGGAGGCACTaGAGAAAGGGTAGCCCCTTCTGCCCCACGGACCTCTCCGCCACA | + |
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Preference number: 1 (lower is better) Translates to: AFHHQRSSQHAARRH*RKGSPFCPTDLSAT Trigger: TGTGGCGGAGAGGTCCGTGGGGCAGAAGGGGCTACCCTTTCTTCAGTGCCTCCGGGCAGCATGCTGGGAAGATCTTTGATGGTGGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CCA 90 bp | TTTGCTGAGTGTCGGGGAAGGCAGAAGGGCTGGCCAACCATCTGTTaGGGAAGAGAGATGAGTCGCACACTCTTGTGCACGGCAGGTGCG | + |
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Preference number: 1 (lower is better) Translates to: FAECRGRQKGWPTIC*GREMSRTLLCTAGA Trigger: CGCACCTGCCGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGATGGTTGGCCAGCCCTTCTGCCTTCCCCGACACTCAGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR TCA 90 bp | GTTGGTGATCCTGGGACTAGGAGGCAGGGCTTTCTTTCTCTTTGCTaGGTGTCGGGGAAGGCAGAAGGGCTGGCCAACCATCTGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: VGDPGTRRQGFLSLC*VSGKAEGLANHLLG Trigger: CCCCAACAGATGGTTGGCCAGCCCTTCTGCCTTCCCCGACACTCAGCAAAGAGAAAGAAAGCCCTGCCTCCTAGTCCCAGGATCACCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CCA 90 bp | GGGGAAGACCAGCGTTCCACGCAGCATGCACTCTTCCTCAACCTCTaGGTTCAGAGAGTGACTGGCTTTGACCAACCTGCCTCCGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GEDQRSTQHALFLNL*VQRVTGFDQPASVS Trigger: AGAGACGGAGGCAGGTTGGTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCTGCGTGGAACGCTGGTCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR TCA 90 bp | GCATGCACTCTTCCTCAACCTCTGGGTTCAGAGAGTGACTGGCTTTaGCCAACCTGCCTCCGTCTCTGGGCCTGGAACGTGGTAACAGTG | + |
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Preference number: 1 (lower is better) Translates to: ACTLPQPLGSESDWL*PTCLRLWAWNVVTV Trigger: CACTGTTACCACGTTCCAGGCCCAGAGACGGAGGCAGGTTGGTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR TCA 90 bp | AGCTGGCTCCGCCTCCCTCTTCCCCATCCTCCCAGTTTTTGGCCTTaGGATAGGAGGATGTTTCTCTCTTCCCGCACAGCATCATTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SWLRLPLPHPPSFWP*DRRMFLSSRTASFL Trigger: CAGGAATGATGCTGTGCGGGAAGAGAGAAACATCCTCCTATCTCAAGGCCAAAAACTGGGAGGATGGGGAAGAGGGAGGCGGAGCCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CCA 90 bp | CACGGTGTGGTAATCTGTCTGCCAGACAAACAGAGGGTGGCAGAATaGCTGGCTTTCTCTAAGACCAGGGGACAGGTTCTCCATGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: HGVVICLPDKQRVAE*LAFSKTRGQVLHAH Trigger: GTGAGCATGGAGAACCTGTCCCCTGGTCTTAGAGAAAGCCAGCCATTCTGCCACCCTCTGTTTGTCTGGCAGACAGATTACCACACCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR TCA 90 bp | GTTCTCCTCAGTGCTCAGACAGGAAGCATGGACGTTCATGGGTGTTaGGAGAGGAAGCTTTGGCTAGAAAGACAGCCACGGTGTGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: VLLSAQTGSMDVHGC*ERKLWLERQPRCGN Trigger: ATTACCACACCGTGGCTGTCTTTCTAGCCAAAGCTTCCTCTCTCAACACCCATGAACGTCCATGCTTCCTGTCTGAGCACTGAGGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CCA 90 bp | CTTGGGGGTCCCTGGTCACAGGAATTGGTAGGACACACTCCAGAGTaGTATCTCAATACAGAGCCTGTCATATCTCTTCCAGGCATTTGG | + |
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Preference number: 1 (lower is better) Translates to: LGGPWSQELVGHTPE*YLNTEPVISLPGIW Trigger: CCAAATGCCTGGAAGAGATATGACAGGCTCTGTATTGAGATACCACTCTGGAGTGTGTCCTACCAATTCCTGTGACCAGGGACCCCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CCA 90 bp | TGTCATATCTCTTCCAGGCATTTGGACCCTGCCTCTCTCCACCTCTaGGCTGTGATTAAAGGTTCCTTGGACCAAAGGAAAGAGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: CHISSRHLDPASLHL*AVIKGSLDQRKEKG Trigger: CCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTGGAGAGAGGCAGGGTCCAAATGCCTGGAAGAGATATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CAA 90 bp | GGCTGGCCAACCATCTGTTGGGGAAGAGAGATGAGTCGCACACTCTaGTGCACGGCAGGTGCGTCGACAGGTGCGCGCTTGCGCGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: GWPTICWGREMSRTL*CTAGASTGARLRAV Trigger: AACAGCGCGCAAGCGCGCACCTGTCGACGCACCTGCCGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGATGGTTGGCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CAA 90 bp | CCCTGGAGTAGCTCACAGCCTCCAGAAGTGACCCCAGTGAGGTCTTaGCCCTGGGCTGGAGAGACGCCGCACTGCTCCTTGGGATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PWSSSQPPEVTPVRS*PWAGETPHCSLGCL Trigger: CAGACATCCCAAGGAGCAGTGCGGCGTCTCTCCAGCCCAGGGCAAAGACCTCACTGGGGTCACTTCTGGAGGCTGTGAGCTACTCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTCCCCTCCTGCCAAGCTaGGGGTGGGTGGCAAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: SGARGRESTDFTRKALLGPLLPS*GWVAKS Trigger: CGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGG...ACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | GACCCCAGTGAGGTCTTTGCCCTGGGCTGGAGAGACGCCGCACTGCTCCTTGGGAGAGCTCAATGGCTTTaGGGGACAGGGGATCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: DPSEVFALGWRDAALLLGRAQWL*GTGDLK Trigger: CTTGAGATCCCCTGTCCCCCAAAGCCATTGAGCTCT...CCCAAGGAGCAGTGCGGCGTCTCTCCAGCCCAGGGCAAAGACCTCACTGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR TCA 90 bp | CTCGTTGAGCAGAGCTCAATGGCTTTGGGGGACAGGGGATCTCAAGACAAGGAGCCCAGATGGATGCCCTaGCCCCACACTCCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LVEQSSMALGDRGSQDKEPRWMP*PHTPAG Trigger: GCCAGCTGGAGTGTGGGGTCAGGGCATCCATCTGGG...CTCCTTGTCTTGAGATCCCCTGTCCCCCAAAGCCATTGAGCTCTGCTCAACGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCGCTGGGGTTCTCCTCAGTGCTCAGACAGGAAGCATGGACGTTCATGGGTGACACGGGAGCTTGTGTaGCTTAAGGAAGGGCCGGGG | + |
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Preference number: 2 (lower is better) Translates to: LRWGSPQCSDRKHGRSWVTRELV*LKEGPG Trigger: CCCCGGCCCTTCCTTAAGTCACACAAGCTCCCGTGT...CACCCATGAACGTCCATGCTTCCTGTCTGAGCACTGAGGAGAACCCCAGCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTACCCCTCCTGCCAAGCTGCGGGTGGGTGGCAAAGTCGTCCCAGAGAAGTCAGGGCATGGGCTCTaGGACTCAATCCACCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LFTPPAKLRVGGKVVPEKSGHGL*DSIHPS Trigger: GCTTGGGTGGATTGAGTCGCAGAGCCCATGCCCTGA...CTTCTCTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGGTAAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCAGCATGCTGCCCGGAGGCACTGAAGAAAGGGTAGCCCCTTCTGCCCCATCTCTTCCAGGCATTTaGACCCTGCCTCTCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: LPSMLPGGTEERVAPSAPSLPGI*TLPLST Trigger: GGTGGAGAGAGGCAGGGTCCAAATGCCTGGAAGAGA...TGGGGCAGAAGGGGCTACCCTTTCTTCAGTGCCTCCGGGCAGCATGCTGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCTCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTGTCTTTGCCCTGGGCTaGAGAGACGCCGCACTGCTC | + |
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Preference number: 2 (lower is better) Translates to: KGLWGQRQRIHRLHKEGPVFALG*RDAALL Trigger: GAGCAGTGCGGCGTCTCTCCAGCCCAGGGCAAAGAC...AGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGAGGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTTAACCCTCCTCCACCCCTGGCCCTCCTGGCCATAGAGTCAGGGTACTGTGCCTGGCTAGGCTaGGTGTGTGCACGTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: FIFNPPPPLALLAIESGYCAWLG*VCARVS Trigger: GCTCACACGTGCACACACTCAGCCTAGCCAGGCACA...GTACCCTGACTCTATGGCCAGGAGGGCCAGGGGTGGAGGAGGGTTAAAGATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGTTTGGTGTCGCTCCTGATGCAGGCAGCCAGGTCAGGATGCAGGTCCCACAAGCTGCGGGTGGGTaGCAAAGTCGTCCCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TLFGVAPDAGSQVRMQVPQAAGG*QSRPRE Trigger: TTCTCTGGGACGACTTTGCCACCCACCCGCAGCTTG...TGGGACCTGCATCCTGACCTGGCTGCCTGCATCAGGAGCGACACCAAACAGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | ACGCAGCATGCACTCTTCCTCAACCTCTGGGTTCAGAGAGTGACTGGCTTTGACCCTTGGGCCCTGCCCTaGAGTAGCTCACAGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TQHALFLNLWVQRVTGFDPWALP*SSSQPP Trigger: TGGAGGCTGTGAGCTACTCCAGGGCAGGGCCCAAGG...GTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCTGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCTCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTGGGGGAACGGGGCCTTaGAGAAAGAATGGAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: KGLWGQRQRIHRLHKEGPGGTGP*RKNGEG Trigger: CCCTTCTCCATTCTTTCTCCAAGGCCCCGTTCCCCC...AGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGAGGCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCGAGGCCCCAGACAGACCCAGCCATGTTTCCTCAGAGGCTTCTGGGTAAACGAGTGTGTGCACGTGTaGGCCTGTACCTGTACACTA | + |
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Preference number: 2 (lower is better) Translates to: LRGPRQTQPCFLRGFWVNECVHV*ACTCTL Trigger: TAGTGTACAGGTACAGGCTCACACGTGCACACACTC...GTTTACCCAGAAGCCTCTGAGGAAACATGGCTGGGTCTGTCTGGGGCCTCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR GCA 90 bp | ACGCAGCATGCACTCTTCCTCAACCTCTGGGTTCAGAGAGTGACTGGCTTTGACCAGGCATTTGGACCCTaGCTCTCTCCACCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: TQHALFLNLWVQRVTGFDQAFGP*LSPPLG Trigger: GCCCAGAGGTGGAGAGAGGCAGGGTCCAAATGCCTG...GTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCTGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCGAGGCCCCAGACAGACCCAGCCATGTTTCCTCAGAGGCTTCTGGGTAAACTTGAGCAGAGCTCAATaGCTTTGGGGGACAGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LRGPRQTQPCFLRGFWVNLSRAQ*LWGTGD Trigger: ATCCCCTGTCCCCCAAAGCCATTGAGCTCTGCTCAA...GTTTACCCAGAAGCCTCTGAGGAAACATGGCTGGGTCTGTCTGGGGCCTCGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCGCTGGGGTTCTCCTCAGTGCTCAGACAGGAAGCATGGACGTTCATGGGTGGTTCTTGGGGGTCCCTaGTCACAGGAATTGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LRWGSPQCSDRKHGRSWVVLGGP*SQELVG Trigger: TCCTACCAATTCCTGTGACCAGGGACCCCCAAGAAC...CACCCATGAACGTCCATGCTTCCTGTCTGAGCACTGAGGAGAACCCCAGCGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | AGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTGTCACGGGGTTTATCTCGAGGTCACTTCCTCCTaGTTGGCCTTGGGCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RIHRLHKEGPAWCHGVYLEVTSS*LALGPA Trigger: GGCAGGGCCCAAGGCCAACCAGGAGGAAGTGACCTC...GAGATAAACCCCGTGACACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | AGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTGTCACGGGGTTTATCTCCTGCCAAGCTGCGGGTaGGTGGCAAAGTCGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RIHRLHKEGPAWCHGVYLLPSCG*VAKSSQ Trigger: CTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAG...GAGATAAACCCCGTGACACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCTCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTGCACAGCATCATTCCTaGCCTACCCTGGTCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: KGLWGQRQRIHRLHKEGPAQHHS*PTLVLK Trigger: TTTGAGGACCAGGGTAGGGCAGGAATGATGCTGTGC...AGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGAGGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | CTACTTCCTCTCCTCTCACAGAGGGCCTTGATGGGGGCATTAAAAATGACCAAAACCCCACACTCCAGCTaGCTCCGCCTCCCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLPLLSQRALMGALKMTKTPHSS*LRLPLP Trigger: GGGAAGAGGGAGGCGGAGCCAGCTGGAGTGTGGGGT...TTTGGTCATTTTTAATGCCCCCATCAAGGCCCTCTGTGAGAGGAGAGGAAGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CAA 90 bp | TTGGACCCTGCCTCTCTCCACCTCTGGGCTGTGATTAAAGGTTCCTaGGACCAAAGGAAAGAGAAAGGGTCACTGTCTCCCCGCTCAACC | + |
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Preference number: 2 (lower is better) Translates to: LDPASLHLWAVIKGS*DQRKEKGSLSPRST Trigger: GGTTGAGCGGGGAGACAGTGACCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTGGAGAGAGGCAGGGTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR GCA 90 bp | AGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTGTCACGGGGTTTATCTCGGTGGCAGCCCTGAGTaGCAGGACGTAAGACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: RIHRLHKEGPAWCHGVYLGGSPE*QDVRLQ Trigger: CTGAAGTCTTACGTCCTGGCACTCAGGGCTGCCACC...GAGATAAACCCCGTGACACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCTGTCATATCTCTTCCAGGCATTTGGACCCTGCCTCTCTCCACCTCTGGGCTCTGCTATTAGAGTaGGACCACAAGAGATCGGCC | + |
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Preference number: 2 (lower is better) Translates to: RACHISSRHLDPASLHLWALLLE*DHKRSA Trigger: GGCCGATCTCTTGTGGTCCCACTCTAATAGCAGAGC...CCAGAGGTGGAGAGAGGCAGGGTCCAAATGCCTGGAAGAGATATGACAGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | AGACAGCCACGGTGTGGTAATCTGTCTGCCAGACAAACAGAGGGTGGCAGAATGCCAGCATGGCTATGGTaGGATTTTAGGGGGAACGGG | + |
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Preference number: 2 (lower is better) Translates to: RQPRCGNLSARQTEGGRMPAWLW*DFRGNG Trigger: CCCGTTCCCCCTAAAATCCCACCATAGCCATGCTGG...CATTCTGCCACCCTCTGTTTGTCTGGCAGACAGATTACCACACCGTGGCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR TCA 90 bp | GATTCCGAAGCTTCCTGCTCCCTTAGAGAGACAGTAACCCCAACAGATTTCAGGACAAGGTGGCAGCCCTaGGTGCCAGGACGTAAGACT | + |
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Preference number: 2 (lower is better) Translates to: DSEASCSLRETVTPTDFRTRWQP*VPGRKT Trigger: AGTCTTACGTCCTGGCACTCAGGGCTGCCACCTTGT...CCTGAAATCTGTTGGGGTTACTGTCTCTCTAAGGGAGCAGGAAGCTTCGGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCCACGGTGTGGTAATCTGTCTGCCAGACAAACAGAGGGTGGCAGAATGCTGGAGAAACTAGCATaGCATCCATGGGGGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: RQPRCGNLSARQTEGGRMLEKLA*HPWGKT Trigger: GGTCTTCCCCCATGGATGGCATGCTAGTTTCTCCAG...CATTCTGCCACCCTCTGTTTGTCTGGCAGACAGATTACCACACCGTGGCTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTGGGCTGTGATTAAAGGTTCCTTGGACCAAAGGAAAGAGAAAGGGTCAGGAAGGCAGAAGGGCTaGCCAACCATCTGTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: HLWAVIKGSLDQRKEKGSGRQKG*PTICWG Trigger: TCCCCAACAGATGGTTGGCCAGCCCTTCTGCCTTCC...TGACCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | ACGCAGCATGCACTCTTCCTCAACCTCTGGGTTCAGAGAGTGACTGGCTTTGACTATGAGCAAAACCCTTaGGCCAGAGCAGAAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TQHALFLNLWVQRVTGFDYEQNP*ARAERP Trigger: AGGCCTTTCTGCTCTGGCCCAAGGGTTTTGCTCATA...GTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCTGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CAA 90 bp | AGAGTGGTATCTCAATACAGAGCCTGTCATATCTCTTCCAGGCATTaGGACCCTGCCTCTCTCCACCTCTGGGCTGTGATTAAAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RVVSQYRACHISSRH*DPASLHLWAVIKGS Trigger: GGAACCTTTAATCACAGCCCAGAGGTGGAGAGAGGCAGGGTCCAAATGCCTGGAAGAGATATGACAGGCTCTGTATTGAGATACCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR TCA 90 bp | AGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTGTCACGGGGTTTATCTCCCCAGTTTTTGGCCTTaGGATAGGAGGATGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: RIHRLHKEGPAWCHGVYLPSFWP*DRRMFL Trigger: GAGAAACATCCTCCTATCTCAAGGCCAAAAACTGGG...GAGATAAACCCCGTGACACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR GCA 90 bp | AGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTGTCACGGGGTTTATCTCAAGGATGCCTTGGGTTaGCAAGGAACACATCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RIHRLHKEGPAWCHGVYLKDALG*QGTHLS Trigger: AGACAGATGTGTTCCTTGGCAACCCAAGGCATCCTT...GAGATAAACCCCGTGACACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTGGGCTGTGATTAAAGGTTCCTTGGACCAAAGGAAAGAGAAAGGGTCATGGCCAACCATCTGTTaGGGAAGAGAGATGAGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: HLWAVIKGSLDQRKEKGSWPTIC*GREMSR Trigger: GCGACTCATCTCTCTTCCCCAACAGATGGTTGGCCA...TGACCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTGTCACGGGGTTTATCTCGGACACACTCCAGAGTaGTATCTCAATACAGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RIHRLHKEGPAWCHGVYLGHTPE*YLNTEP Trigger: AGGCTCTGTATTGAGATACCACTCTGGAGTGTGTCC...GAGATAAACCCCGTGACACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CAA 90 bp | CTGAAGATGGAAAGTGCTTTACAAATCCAGAGCTGCTCACCCTTTTaGTCCTTTATGAGCAAAACCCTTGGGCCAGAGCAGAAAGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LKMESALQIQSCSPF*SFMSKTLGPEQKGL Trigger: GAGGCCTTTCTGCTCTGGCCCAAGGGTTTTGCTCATAAAGGACAAAAAGGGTGAGCAGCTCTGGATTTGTAAAGCACTTTCCATCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCCAGAGTGGTATCTCAATACAGAGCCTGTCATATCTCTTCCAGGCATTTGGAATTCCTGCCCTACCCTaGTCCTCAAAGATTCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LQSGISIQSLSYLFQAFGIPALP*SSKIPL Trigger: AAGGGGAATCTTTGAGGACCAGGGTAGGGCAGGAAT...TCCAAATGCCTGGAAGAGATATGACAGGCTCTGTATTGAGATACCACTCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTTACAAATCCAGAGCTGCTCACCCTTTTTGTCCTTTATGAGCAAAACCCTCTAGTTATGTTTATCTaGGTCTCACCGAGGAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: CFTNPELLTLFVLYEQNPLVMFI*VSPRRL Trigger: CAGTCTCCTCGGTGAGACTCAGATAAACATAACTAG...AGGGTTTTGCTCATAAAGGACAAAAAGGGTGAGCAGCTCTGGATTTGTAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | GCTGGAGAGACGCCGCACTGCTCCTTGGGATGTCTGTaGCTGGCTAGGCTGAGTGTGTGCACGTGTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AGETPHCSLGCL*LARLSVCTCEP Trigger: AGGCTCACACGTGCACACACTCAGCCTAGCCAGGCACAGACATCCCAAGGAGCAGTGCGGCGTCTCTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | GTGAGGTCTTTGCCCTGGGCTGGAGAGACGCCGCACTaGTCCTTGGGATGTCTGTGCCTGGCTAGGCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VRSLPWAGETPH*SLGCLCLARLS Trigger: ACTCAGCCTAGCCAGGCACAGACATCCCAAGGAGCAGTGCGGCGTCTCTCCAGCCCAGGGCAAAGACCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGTTTGGTGTCGCTCCTGATGCAGGCAGCCAGGTCAGGATGCAGGTCCCAACGCCGCACTGCTCCTaGGGATGTCTGTGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLFGVAPDAGSQVRMQVPTPHCS*GCLCLA Trigger: AGCCAGGCACAGACATCCCAAGGAGCAGTGCGGCGT...TGGGACCTGCATCCTGACCTGGCTGCCTGCATCAGGAGCGACACCAAACAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCGCTGGGGTTCTCCTCAGTGCTCAGACAGGAAGCATGGACGTTCATGGGTGACCCCAGTGAGGTCTTaGCCCTGGGCTGGAGAGACG | + |
|
Preference number: 3 (lower is better) Translates to: LRWGSPQCSDRKHGRSWVTPVRS*PWAGET Trigger: CGTCTCTCCAGCCCAGGGCAAAGACCTCACTGGGGT...CACCCATGAACGTCCATGCTTCCTGTCTGAGCACTGAGGAGAACCCCAGCGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | CTCCGTCTCTGGGCCTGGAACGTGGTAACAGTGGCATaGCCTCATAGGGAACCGGGGGTAACCGAGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRLWAWNVVTVA*PHREPGVTEGE Trigger: CTCTCCCTCGGTTACCCCCGGTTCCCTATGAGGTCATGCCACTGTTACCACGTTCCAGGCCCAGAGACGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | ATCTGTTGGGGAAGAGAGATGAGTCGCACACTCTTGTaGACGGCAGGTGCGTCGACAGGTGCGCGCTTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: ICWGREMSRTLL*TAGASTGARLR Trigger: GCGCAAGCGCGCACCTGTCGACGCACCTGCCGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCAGCATGCTGCCCGGAGGCACTGAAGAAAGGGTAGCCCCTTCTGCCCCAATCTCTTCCAGGCATTaGGACCCTGCCTCTCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSMLPGGTEERVAPSAPISSRH*DPASLH Trigger: GTGGAGAGAGGCAGGGTCCAAATGCCTGGAAGAGAT...TGGGGCAGAAGGGGCTACCCTTTCTTCAGTGCCTCCGGGCAGCATGCTGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | CATCAAAGATCTTCCCAGCATGCTGCCCGGAGGCACTaGAGAAAGGGTAGCCCCTTCTGCCCCACGGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: HQRSSQHAARRH*RKGSPFCPTDL Trigger: GAGGTCCGTGGGGCAGAAGGGGCTACCCTTTCTTCAGTGCCTCCGGGCAGCATGCTGGGAAGATCTTTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | AAGCAGCTCCCAATCTGTTTACCCCTCCTGCCAAGCTaGGGGTGGGTGGCAAAGTCGTCCCAGAGAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KQLPICLPLLPS*GWVAKSSQRRV Trigger: GACCCTTCTCTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGGTAAACAGATTGGGAGCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | GGCAAAGTCGTCCCAGAGAAGGGTCTCAGGTCACGGTaGCTCCGCCTCGGGGCTTTCCACCATCAAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: GKVVPEKGLRSR*LRLGAFHHQRS Trigger: AGATCTTTGATGGTGGAAAGCCCCGAGGCGGAGCCACCGTGACCTGAGACCCTTCTCTGGGACGACTTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | CAATCTGTTTACCCCTCCTGCCAAGCTGCGGGTGGGTaGCAAAGTCGTCCCAGAGAAGGGTCTCAGGTCACG | + |
|
Preference number: 3 (lower is better) Translates to: QSVYPSCQAAGG*QSRPREGSQVT Trigger: CGTGACCTGAGACCCTTCTCTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGGTAAACAGATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCTTTAACCCTCCTCCACCCCTGGCCCTCCTGGCCATAGAGTCAGGGTACCCTGCACAAGCATCTTaGAGAGCAGGGGGTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FIFNPPPPLALLAIESGYPAQAS*RAGGGS Trigger: GCTTCCACCCCCTGCTCTCAAAGATGCTTGTGCAGG...GTACCCTGACTCTATGGCCAGGAGGGCCAGGGGTGGAGGAGGGTTAAAGATGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | AGAAGGGCTGGCCAACCATCTGTTGGGGAAGAGAGATaGGTCGCACACTCTTGTGCACGGCAGGTGCGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: RRAGQPSVGEER*VAHSCARQVRR Trigger: TCGACGCACCTGCCGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGATGGTTGGCCAGCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | AGGGGATCTCAAGACAAGGAGACAAGGTGGCAGCCCTaGGTGCCAGGACGTAAGACTTCAGGGCATGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGSQDKETRWQP*VPGRKTSGHGL Trigger: GAGCCCATGCCCTGAAGTCTTACGTCCTGGCACTCAGGGCTGCCACCTTGTCTCCTTGTCTTGAGATCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | CCCCTGGCCCTCCTGGCCATAGAGTCAGGGTACAGGTaGTTTGGCTGTAGGTCCAGGTGTTCTAGTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLALLAIESGYR*FGCRSRCSSPQ Trigger: TTGGGGACTAGAACACCTGGACCTACAGCCAAATCACCTGTACCCTGACTCTATGGCCAGGAGGGCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | CTTCCTCAACCTCTGGGTTCAGAGAGTGACTGGCTTTaGCCAACCTGCCTCCGTCTCTGGGCCTGGAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPQPLGSESDWL*PTCLRLWAWNV Trigger: CACGTTCCAGGCCCAGAGACGGAGGCAGGTTGGTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | GATCTCAAGACAAGGAGACAAGGTGGCAGCCCTGAGTaGCAGGACGTAAGACTTCAGGGCATGGGCTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: DLKTRRQGGSPE*QDVRLQGMGSA Trigger: CGCAGAGCCCATGCCCTGAAGTCTTACGTCCTGGCACTCAGGGCTGCCACCTTGTCTCCTTGTCTTGAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | GCCATCCATGGGGGAAGACCAGCGTTCCACGCAGCATaGACTCTTCCTCAACCTCTGGGTTCAGAGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: AIHGGRPAFHAA*TLPQPLGSESD Trigger: GTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCTGCGTGGAACGCTGGTCTTCCCCCATGGATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | TGTCGGGGAAGGCAGAAGGGCTGGCCAACCATCTGTTaGGGAAGAGAGATGAGTCGCACACTCTTGTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: CRGRQKGWPTIC*GREMSRTLLCT Trigger: CGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGATGGTTGGCCAGCCCTTCTGCCTTCCCCGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCACATGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTAAGTCCTCCAGCAGGTaGGTGATCCTGGGACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QPHGQRLPKGGHFLLVGLKSSSR*VILGLG Trigger: TCCTAGTCCCAGGATCACCAACCTGCTGGAGGACTT...AAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCATGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | AGCATGCACTCTTCCTCAACCTCTGGGTTCAGAGAGTaGCTGGCTTTGACCAACCTGCCTCCGTCTCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SMHSSSTSGFRE*LALTNLPPSLG Trigger: GCCCAGAGACGGAGGCAGGTTGGTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | TTCTCCATGCTCACGAAAGCCACACGGGAGCTTGTGTaGCTTAAGGAAGGGCCGGGGGACACTGGGCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: FSMLTKATRELV*LKEGPGDTGPI Trigger: AATTGGCCCAGTGTCCCCCGGCCCTTCCTTAAGTCACACAAGCTCCCGTGTGGCTTTCGTGAGCATGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | GAAGTAGAAAGCAGCTCCCAATCTGTTTACCCCTCCTaGCAAGCTGCGGGTGGGTGGCAAAGTCGTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EVESSSQSVYPS*QAAGGWQSRPR Trigger: TCTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGGTAAACAGATTGGGAGCTGCTTTCTACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | CCGCTGGGGTTCTCCTCAGTGCTCAGACAGGAAGCATaGACGTTCATGGGTGTTGAGAGAGGAAGCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLGFSSVLRQEA*TFMGVERGSFG Trigger: GCCAAAGCTTCCTCTCTCAACACCCATGAACGTCCATGCTTCCTGTCTGAGCACTGAGGAGAACCCCAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | CGCCTCCCTCTTCCCCATCCTCCCAGTTTTTGGCCTTaGGATAGGAGGATGTTTCTCTCTTCCCGCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLPLPHPPSFWP*DRRMFLSSRTA Trigger: TGCTGTGCGGGAAGAGAGAAACATCCTCCTATCTCAAGGCCAAAAACTGGGAGGATGGGGAAGAGGGAGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | GCACTGAACAATGAGCTCCGCTGGGGTTCTCCTCAGTaGTCAGACAGGAAGCATGGACGTTCATGGGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ALNNELRWGSPQ*SDRKHGRSWVL Trigger: CAACACCCATGAACGTCCATGCTTCCTGTCTGAGCACTGAGGAGAACCCCAGCGGAGCTCATTGTTCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | ACGCAGCATGCACTCTTCCTCAACCTCTGGGTTCAGAGAGTGACTGGCTTTGACCTGGCCAACCATCTGTaGGGGAAGAGAGATGAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: TQHALFLNLWVQRVTGFDLANHL*GKRDES Trigger: CGACTCATCTCTCTTCCCCAACAGATGGTTGGCCAG...GTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | GGAGGATGTTTCTCTCTTCCCGCACAGCATCATTCCTaGCCTACCCTGGTCCTCAAAGATTCCCCTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGCFSLPAQHHS*PTLVLKDSPSQ Trigger: CTGAGAAGGGGAATCTTTGAGGACCAGGGTAGGGCAGGAATGATGCTGTGCGGGAAGAGAGAAACATCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | TCTCTCTTCCCGCACAGCATCATTCCTGCCCTACCCTaGTCCTCAAAGATTCCCCTTCTCAGTCTGTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLFPHSIIPALP*SSKIPLLSLFS Trigger: GGAGAACAGACTGAGAAGGGGAATCTTTGAGGACCAGGGTAGGGCAGGAATGATGCTGTGCGGGAAGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | CTTGTCTCTCCAGGCTTCTCAGGAAGTCCCCGTCTTTaGGGACATGAGACTCAGCTTGCTGGAGAAACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVSPGFSGSPRL*GHETQLAGETS Trigger: GCTAGTTTCTCCAGCAAGCTGAGTCTCATGTCCCCAAAGACGGGGACTTCCTGAGAAGCCTGGAGAGACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | TCTGTCTGCCAGACAAACAGAGGGTGGCAGAATGGCTaGCTTTCTCTAAGACCAGGGGACAGGTTCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SVCQTNRGWQNG*LSLRPGDRFSM Trigger: CATGGAGAACCTGTCCCCTGGTCTTAGAGAAAGCCAGCCATTCTGCCACCCTCTGTTTGTCTGGCAGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTATATTAGGGGTCTCGTaGAGCAGAGCTCAATGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGARGRESTDFTRKALLGILGVS*SRAQWL Trigger: AAGCCATTGAGCTCTGCTCAACGAGACCCCTAATAT...ACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCAGCATGCTGCCCGGAGGCACTGAAGAAAGGGTAGCCCCTTCTGCCCCAGTGATTAAAGGTTCCTaGGACCAAAGGAAAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPSMLPGGTEERVAPSAPVIKGS*DQRKEK Trigger: TTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCAC...TGGGGCAGAAGGGGCTACCCTTTCTTCAGTGCCTCCGGGCAGCATGCTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | GTAATCTGTCTGCCAGACAAACAGAGGGTGGCAGAATaGCTGGCTTTCTCTAAGACCAGGGGACAGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VICLPDKQRVAE*LAFSKTRGQVL Trigger: GAGAACCTGTCCCCTGGTCTTAGAGAAAGCCAGCCATTCTGCCACCCTCTGTTTGTCTGGCAGACAGATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTGCTTGGTCCTAAAGTGCTTCCCTaGCTCCTAATAAACATTTCG | + |
|
Preference number: 3 (lower is better) Translates to: SGARGRESTDFTRKALLGPKVLP*LLINIS Trigger: CGAAATGTTTATTAGGAGCAAGGGAAGCACTTTAGG...ACCAAGCAGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | TTTGAGAGCAGGGGGTGGAAGCAGACGTGTGGCCCATaGGTCACTCGTTCTTATGTATCACTAACATGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FESRGWKQTCGP*VTRSYVSLTWM Trigger: CATCCATGTTAGTGATACATAAGAACGAGTGACTCATGGGCCACACGTCTGCTTCCACCCCCTGCTCTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CCA 72 bp | CCCTGGTCACAGGAATTGGTAGGACACACTCCAGAGTaGTATCTCAATACAGAGCCTGTCATATCTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PWSQELVGHTPE*YLNTEPVISLP Trigger: TGGAAGAGATATGACAGGCTCTGTATTGAGATACCACTCTGGAGTGTGTCCTACCAATTCCTGTGACCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | GCCAGGTCAGGATGCAGGTCCCATTTGCCAGTGAACTaGTTTTCAAAGAGAAACTTAGAAATCCAGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ARSGCRSHLPVN*FSKRNLEIQWG Trigger: TCCCCACTGGATTTCTAAGTTTCTCTTTGAAAATCAGTTCACTGGCAAATGGGACCTGCATCCTGACCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR TCA 72 bp | GAAAATTACATGTATGAGGTAGGCAGAAATACCCTGTaGATATCTTCCTTAAAGTTCCAGTGTGGGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ENYMYEVGRNTL*ISSLKFQCGGR Trigger: CCTTCCCCCACACTGGAACTTTAAGGAAGATATTCACAGGGTATTTCTGCCTACCTCATACATGTAATTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR GCA 72 bp | TTTCTGAAGATGGAAAGTGCTTTACAAATCCAGAGCTaGTCACCCTTTTTGTCCTTTATGAGCAAAACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLKMESALQIQS*SPFLSFMSKTL Trigger: AAGGGTTTTGCTCATAAAGGACAAAAAGGGTGAGCAGCTCTGGATTTGTAAAGCACTTTCCATCTTCAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTGGGCCCTGAGCCTGTGCCGGGGCTaGTGCCGTACCCAGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WPKASQRRSLPPGWPWALSLCRG*CRTQAW Trigger: CCAGGCCTGGGTACGGCAGCAGCCCCGGCACAGGCT...CAGGGCCCAAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTGGGCCCTGCCCACGTGGGTGTTGTaGGCGTCAGCCCTCGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPKASQRRSLPPGWPWALPTWVL*ASALAL Trigger: GAGGGCGAGGGCTGACGCCCACAACACCCACGTGGG...CAGGGCCCAAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAGCATGCTGCCCGGAGGCACTGAAGAAAGGGTAGCCCCTTCTGCCCCAAAGTACAGCGCTCCATaGGCCCAGCACTGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSMLPGGTEERVAPSAPKYSAP*AQHCRP Trigger: GGGCCTGCAGTGCTGGGCGCATGGAGCGCTGTACTT...TGGGGCAGAAGGGGCTACCCTTTCTTCAGTGCCTCCGGGCAGCATGCTGGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCACATGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTCTGTGCCGGGGCTGCTaGCGTACCCAGGCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPHGQRLPKGGHFLLVGLLCRGC*RTQAWE Trigger: TTCCCAGGCCTGGGTACGGCAGCAGCCCCGGCACAG...AAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCATGTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CAA 72 bp | TCTTTGCCCTGGGCTGGAGAGACGCCGCACTGCTCCTaGGGATGTCTGTGCCTGGCTAGGCTGAGTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPWAGETPHCS*GCLCLARLSVC Trigger: GCACACACTCAGCCTAGCCAGGCACAGACATCCCAAGGAGCAGTGCGGCGTCTCTCCAGCCCAGGGCAAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCCAGCATGCTGCCCGGAGGCACTGAAGAAAGGGTAGCCCCTTCTGCCCCATCCTTAAAGCCTCTCTaGAGCAGGCCAGTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSMLPGGTEERVAPSAPSLKPL*SRPVLP Trigger: GGGGAGGACTGGCCTGCTCCAGAGAGGCTTTAAGGA...TGGGGCAGAAGGGGCTACCCTTTCTTCAGTGCCTCCGGGCAGCATGCTGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTGGGCCCTGTGCCTGAACTGGAACTaGCATTCCAGCAGCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPKASQRRSLPPGWPWALCLNWN*HSSSPR Trigger: CCTGGGGCTGCTGGAATGTCAGTTCCAGTTCAGGCA...CAGGGCCCAAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCTCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTTGGCCAGTGCATGCGTaGGGGCAGCTGCAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLWGQRQRIHRLHKEGPWPVHA*GQLQTL Trigger: CAGTGTCTGCAGCTGCCCTCACGCATGCACTGGCCA...AGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGAGGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | ACGCAGCATGCACTCTTCCTCAACCTCTGGGTTCAGAGAGTGACTGGCTTTGACCCACACACACCCCACTaGCAGGCCTGCCGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQHALFLNLWVQRVTGFDPHTPH*QACRLS Trigger: GGAGAGCCGGCAGGCCTGGCAGTGGGGTGTGTGTGG...GTCAAAGCCAGTCACTCTCTGAACCCAGAGGTTGAGGAAGAGTGCATGCTGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | CTGCGAGGCCCCAGACAGACCCAGCCATGTTTCCTCAGAGGCTTCTGGGTAAACTCGCCCTCAGGTCCTTaGTTCCTCTCTTGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGPRQTQPCFLRGFWVNSPSGP*FLSWAP Trigger: TGGGGCCCAAGAGAGGAAGCAAGGACCTGAGGGCGA...GTTTACCCAGAAGCCTCTGAGGAAACATGGCTGGGTCTGTCTGGGGCCTCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | TTCATCTTTAACCCTCCTCCACCCCTGGCCCTCCTGGCCATAGAGTCAGGGTACACACCCTGCCTGCCGTaGCCGGAGAGTACTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIFNPPPPLALLAIESGYTPCLP*PESTCW Trigger: CCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGT...GTACCCTGACTCTATGGCCAGGAGGGCCAGGGGTGGAGGAGGGTTAAAGATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CAA 72 bp | ACCATCTGTTGGGGAAGAGAGATGAGTCGCACACTCTaGTGCACGGCAGGTGCGTCGACAGGTGCGCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TICWGREMSRTL*CTAGASTGARL Trigger: CAAGCGCGCACCTGTCGACGCACCTGCCGTGCACAAGAGTGTGCGACTCATCTCTCTTCCCCAACAGATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CAA 72 bp | ACAGGTTCTCCATGCTCACGAAAGCCACACGGGAGCTaGTGTGACTTAAGGAAGGGCCGGGGGACACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSPCSRKPHGS*CDLRKGRGTLG Trigger: GCCCAGTGTCCCCCGGCCCTTCCTTAAGTCACACAAGCTCCCGTGTGGCTTTCGTGAGCATGGAGAACCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGTTGGTGATCCTGGGACTAGGAGGCAGGGCTTTCTTTCTCTTTGCTGAGCCATGCGCCCAGCACTaGAGGCCCTGGCCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLVILGLGGRAFFLFAEPCAQH*RPWPVH Trigger: ATGCACTGGCCAGGGCCTGCAGTGCTGGGCGCATGG...CTCAGCAAAGAGAAAGAAAGCCCTGCCTCCTAGTCCCAGGATCACCAACCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCCTGTCATATCTCTTCCAGGCATTTGGACCCTGCCTCTCTCCACCTCTGGCCGGAGAGTACTTGCTaGGCCGGCAGAAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RACHISSRHLDPASLHLWPESTC*AGRSWE Trigger: CTCCCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGG...CCAGAGGTGGAGAGAGGCAGGGTCCAAATGCCTGGAAGAGATATGACAGGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR TCA 90 bp | TTCATCTTTAACCCTCCTCCACCCCTGGCCCTCCTGGCCATAGAGTCAGGGTACCAGCACCACTGCACCTaGCAGTGGCAGGAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: FIFNPPPPLALLAIESGYQHHCT*QWQEKT Trigger: GGTTTTCTCCTGCCACTGTCAGGTGCAGTGGTGCTG...GTACCCTGACTCTATGGCCAGGAGGGCCAGGGGTGGAGGAGGGTTAAAGATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR GCA 90 bp | TGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTGGGCCCTGCACAGCATAGGCTGCTaGAACTGGAGTCTCGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WPKASQRRSLPPGWPWALHSIGC*NWSLEN Trigger: GTTCTCGAGACTCCAGTTGCAGCAGCCTATGCTGTG...CAGGGCCCAAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCCTGTCATATCTCTTCCAGGCATTTGGACCCTGCCTCTCTCCACCTCTGGCACGAGCTCCTGCTGTaGACACTGCTGGCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RACHISSRHLDPASLHLWHELLL*TLLALH Trigger: GTGGAGTGCCAGCAGTGTGCACAGCAGGAGCTCGTG...CCAGAGGTGGAGAGAGGCAGGGTCCAAATGCCTGGAAGAGATATGACAGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTGGGCCCTGTGGGCCGGCAGAAGCTaGGAGAATCTTCCATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPKASQRRSLPPGWPWALWAGRS*ENLPCR Trigger: TCTACATGGAAGATTCTCCCAGCTTCTGCCGGCCCA...CAGGGCCCAAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR GCA 90 bp | GTTGCCAAGGAACACATCTGTCTTCATCAGGGAAGTAGAAAGCAGCTCCCAATCGCAGGCCCTGGCCAGTaGATGCGTGAGGGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VAKEHICLHQGSRKQLPIAGPGQ*MREGSC Trigger: GCAGCTGCCCTCACGCATGCACTGGCCAGGGCCTGC...GATTGGGAGCTGCTTTCTACTTCCCTGATGAAGACAGATGTGTTCCTTGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| 3UTR CAA 72 bp | AGGACACCCTCCCTAAGAGTGACATCCACGGAGCCCTaGTCTCTCCAGGCTTCTCAGGAAGTCCCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLRVTSTEP*SLQASQEVPVF Trigger: AAAGACGGGGACTTCCTGAGAAGCCTGGAGAGACAAGGGCTCCGTGGATGTCACTCTTAGGGAGGGTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR GCA 90 bp | TGTACACTACTTCCTCTCCTCTCACAGAGGGCCTTGATGGGGGCATTAAAAATGTCCCGCCTGCAGAGCTaGTTCTGCCGCCTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTLLPLLSQRALMGALKMSRLQS*FCRLDS Trigger: GCTGTCCAGGCGGCAGAAGCAGCTCTGCAGGCGGGA...CATTTTTAATGCCCCCATCAAGGCCCTCTGTGAGAGGAGAGGAAGTAGTGTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | CACCTCTGGGCTGTGATTAAAGGTTCCTTGGACCAAAGGAAAGAGAAAGGGTCAGCCCTGGCCAGTGCATaGGTGAGGGCAGCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLWAVIKGSLDQRKEKGSALASA*VRAAAD Trigger: GTCTGCAGCTGCCCTCACGCATGCACTGGCCAGGGC...TGACCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | TTCATCTTTAACCCTCCTCCACCCCTGGCCCTCCTGGCCATAGAGTCAGGGTACCGAAACGGGGAGAGCTaGTTCCAACAGGTACGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FIFNPPPPLALLAIESGYRNGES*FQQVRT Trigger: TGTTCGTACCTGTTGGAAGCAGCTCTCCCCGTTTCG...GTACCCTGACTCTATGGCCAGGAGGGCCAGGGGTGGAGGAGGGTTAAAGATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR GCA 90 bp | CTACTTCCTCTCCTCTCACAGAGGGCCTTGATGGGGGCATTAAAAATGACCAAATGCCCGGAGAGTACTTaGTGGGCCGGCAGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPLLSQRALMGALKMTKCPEST*WAGRSW Trigger: CCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCA...TTTGGTCATTTTTAATGCCCCCATCAAGGCCCTCTGTGAGAGGAGAGGAAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGTTGGTGATCCTGGGACTAGGAGGCAGGGCTTTCTTTCTCTTTGCTGAGAGGAGAAAACCACCATaGGGCTCTGGGTGTCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLVILGLGGRAFFLFAERRKPP*GSGCRS Trigger: GCTACGACACCCAGAGCCGCATGGTGGTTTTCTCCT...CTCAGCAAAGAGAAAGAAAGCCCTGCCTCCTAGTCCCAGGATCACCAACCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR CCA 90 bp | CACCTCTGGGCTGTGATTAAAGGTTCCTTGGACCAAAGGAAAGAGAAAGGGTCATGCCGTACCCAGGCCTaGGAAGGGTGTCAGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLWAVIKGSLDQRKEKGSCRTQA*EGCQDL Trigger: GAGGTCCTGACACCCTTCCCAGGCCTGGGTACGGCA...TGACCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR CCA 90 bp | CACCTCTGGGCTGTGATTAAAGGTTCCTTGGACCAAAGGAAAGAGAAAGGGTCAGCCTTGATGCCCACGTaGGTGTTGTGGGCGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLWAVIKGSLDQRKEKGSALMPT*VLWASA Trigger: GGCTGACGCCCACAACACCCACGTGGGCATCAAGGC...TGACCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CAA 72 bp | GCCTCTCTCCACCTCTGGGCTGTGATTAAAGGTTCCTaGGACCAAAGGAAAGAGAAAGGGTCACTGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLHLWAVIKGS*DQRKEKGSLSP Trigger: GGGAGACAGTGACCCTTTCTCTTTCCTTTGGTCCAAGGAACCTTTAATCACAGCCCAGAGGTGGAGAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CAA 72 bp | CAGTGCTCAGACAGGAAGCATGGACGTTCATGGGTGTaGAGAGAGGAAGCTTTGGCTAGAAAGACAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: QCSDRKHGRSWV*REEALARKTAT Trigger: CGTGGCTGTCTTTCTAGCCAAAGCTTCCTCTCTCAACACCCATGAACGTCCATGCTTCCTGTCTGAGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR CCA 90 bp | CTACTTCCTCTCCTCTCACAGAGGGCCTTGATGGGGGCATTAAAAATGACCAAAATAGGCTGCTGCAACTaGAGTCTCGAGAACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLLSQRALMGALKMTKIGCCN*SLENTP Trigger: GGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTAT...TTTGGTCATTTTTAATGCCCCCATCAAGGCCCTCTGTGAGAGGAGAGGAAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR TCA 90 bp | TGCTTTACAAATCCAGAGCTGCTCACCCTTTTTGTCCTTTATGAGCAAAACCCTGCCCCAGGAAGTTGCTaGGGAACTTGGTGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CFTNPELLTLFVLYEQNPAPGSC*GTWCCT Trigger: AGTACAGCACCAAGTTCCTCAGCAACTTCCTGGGGC...AGGGTTTTGCTCATAAAGGACAAAAAGGGTGAGCAGCTCTGGATTTGTAAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| 3UTR CAA 72 bp | GAAAGTGCTTTACAAATCCAGAGCTGCTCACCCTTTTaGTCCTTTATGAGCAAAACCCTTGGGCCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESALQIQSCSPF*SFMSKTLGPEQ Trigger: CTGCTCTGGCCCAAGGGTTTTGCTCATAAAGGACAAAAAGGGTGAGCAGCTCTGGATTTGTAAAGCACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CCA 90 bp | CAGGTGAGCACCAGCCTGTGCCGGGGCTGCTGCCGTACCCAGGCCTaGGAAGGGTGTCAGGACCTCACGACCGGTCAGGCCGAAGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QVSTSLCRGCCRTQA*EGCQDLTTGQAEVG Trigger: GCCTACTTCGGCCTGACCGGTCGTGAGGTCCTGACACCCTTCCCAGGCCTGGGTACGGCAGCAGCCCCGGCACAGGCTGGTGCTCACCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 90 bp | CCACCATGCGGCTCTGGGTGTCGTAGCCTCGCCCACAGCATAGGCTaGTGCAACTGGAGTCTCGAGAACACACCCTGCCTGCCGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPCGSGCRSLAHSIG*CNWSLENTPCLPCP Trigger: CGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTATGCTGTGGGCGAGGCTACGACACCCAGAGCCGCATGGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 90 bp | GCCCACAGCATAGGCTGCTGCAACTGGAGTCTCGAGAACACACCCTaGCTGCCGTGCCCGGAGAGTACTTGCTGGGCCGGCAGAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AHSIGCCNWSLENTP*LPCPESTCWAGRSW Trigger: CCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTATGCTGTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 90 bp | GCGCCCAGCACTGCAGGCCCTGGCCAGTGCATGCGTGAGGGCAGCTaGAGACACTGCATACAGGAAGGCCGTCTCCTTAAAGCCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: APSTAGPGQCMREGS*RHCIQEGRLLKASL Trigger: CAGAGAGGCTTTAAGGAGACGGCCTTCCTGTATGCAGTGTCTGCAGCTGCCCTCACGCATGCACTGGCCAGGGCCTGCAGTGCTGGGCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CCA 90 bp | GGCTCTGGGTGTCGTAGCCTCGCCCACAGCATAGGCTGCTGCAACTaGAGTCTCGAGAACACACCCTGCCTGCCGTGCCCGGAGAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GSGCRSLAHSIGCCN*SLENTPCLPCPEST Trigger: AGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTATGCTGTGGGCGAGGCTACGACACCCAGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR CAA 90 bp | TTCATCTTTAACCCTCCTCCACCCCTGGCCCTCCTGGCCATAGAGTCAGGGTACATGCCCACGTGGGTGTaGTGGGCGTCAGCCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FIFNPPPPLALLAIESGYMPTWV*WASALA Trigger: GGCGAGGGCTGACGCCCACAACACCCACGTGGGCAT...GTACCCTGACTCTATGGCCAGGAGGGCCAGGGGTGGAGGAGGGTTAAAGATGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CCA 90 bp | TTGCAGGTTGTTCTCAGGCCGCTCTTCACAGCCTTGATGCCCACGTaGGTGTTGTGGGCGTCAGCCCTCGCCCTCAGGTCCTTGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQVVLRPLFTALMPT*VLWASALALRSLLP Trigger: AGGAAGCAAGGACCTGAGGGCGAGGGCTGACGCCCACAACACCCACGTGGGCATCAAGGCTGTGAAGAGCGGCCTGAGAACAACCTGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 90 bp | TGGAGTCTCGAGAACACACCCTGCCTGCCGTGCCCGGAGAGTACTTaGTGGGCCGGCAGAAGCTGGGAGAATCTTCCATGTAGACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WSLENTPCLPCPEST*WAGRSWENLPCRPG Trigger: ACCTGGTCTACATGGAAGATTCTCCCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 90 bp | ATAGGCTGCTGCAACTGGAGTCTCGAGAACACACCCTGCCTGCCGTaGCCGGAGAGTACTTGCTGGGCCGGCAGAAGCTGGGAGAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: IGCCNWSLENTPCLP*PESTCWAGRSWENL Trigger: AAGATTCTCCCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACCCCTCCTGCCAAGCTGCGGGTGGGTGGCAAAGTCGTCCCAGAGAAGTTGGGCCCCAGGAAGTaGCTGAGGAACTTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFTPPAKLRVGGKVVPEKLGPRK*LRNLVL Trigger: CAGCACCAAGTTCCTCAGCAACTTCCTGGGGCCCAA...CTTCTCTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGGTAAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS-3UTR CAA 90 bp | TGGCCAAAGGCTTCCCAAAGGAGGTCACTTCCTCCTGGTTGGCCTTGGGCCCTGTCCTTGCTTCCTCTCTaGGGCCCCAGGAAGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WPKASQRRSLPPGWPWALSLLPL*GPRKLL Trigger: CAGCAACTTCCTGGGGCCCAAGAGAGGAAGCAAGGA...CAGGGCCCAAGGCCAACCAGGAGGAAGTGACCTCCTTTGGGAAGCCTTTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACCCCTCCTGCCAAGCTGCGGGTGGGTGGCAAAGTCGTCCCAGAGAAGGACACACCATGGCACTaGCAGGTTGTTCTCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LFTPPAKLRVGGKVVPEKDTPWH*QVVLRP Trigger: CGGCCTGAGAACAACCTGCAAGTGCCATGGTGTGTC...CTTCTCTGGGACGACTTTGCCACCCACCCGCAGCTTGGCAGGAGGGGTAAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCTCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTCGACCCAAGGCCTCGTaGGTGGCACTGGACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGLWGQRQRIHRLHKEGPRPKAS*VALDTL Trigger: CAAGGTGTCCAGTGCCACCAACGAGGCCTTGGGTCG...AGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGAGGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCTCTGGGGCCAGAGGCAGAGAATCCACAGACTTCACAAGGAAGGCCCTCCGCTCTTCACAGCCTaGATGCCCACGTGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGLWGQRQRIHRLHKEGPPLFTA*MPTWVL Trigger: CAACACCCACGTGGGCATCAAGGCTGTGAAGAGCGG...AGGGCCTTCCTTGTGAAGTCTGTGGATTCTCTGCCTCTGGCCCCAGAGGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CAA 90 bp | AGACAGCCACGGTGTGGTAATCTGTCTGCCAGACAAACAGAGGGTGGCAGAATGGTGCTGTACTTCAGATaGTCACCACACACACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQPRCGNLSARQTEGGRMVLYFR*SPHTPH Trigger: GTGGGGTGTGTGTGGTGACAATCTGAAGTACAGCAC...CATTCTGCCACCCTCTGTTTGTCTGGCAGACAGATTACCACACCGTGGCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CAA 90 bp | ACTCTGTTTGGTGTCGCTCCTGATGCAGGCAGCCAGGTCAGGATGCAGGTCCCAAAGTTGCTGAGGAACTaGGTGCTGTACTTCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: TLFGVAPDAGSQVRMQVPKLLRN*VLYFRL Trigger: CAATCTGAAGTACAGCACCAAGTTCCTCAGCAACTT...TGGGACCTGCATCCTGACCTGGCTGCCTGCATCAGGAGCGACACCAAACAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTTACAAATCCAGAGCTGCTCACCCTTTTTGTCCTTTATGAGCAAAACCCTGTGCCCGGAGAGTACTaGCTGGGCCGGCAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFTNPELLTLFVLYEQNPVPGEY*LGRQKL Trigger: CAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCAC...AGGGTTTTGCTCATAAAGGACAAAAAGGGTGAGCAGCTCTGGATTTGTAAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS CCA 72 bp | ACCAGCCTGTGCCGGGGCTGCTGCCGTACCCAGGCCTaGGAAGGGTGTCAGGACCTCACGACCGGTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSLCRGCCRTQA*EGCQDLTTGQA Trigger: GGCCTGACCGGTCGTGAGGTCCTGACACCCTTCCCAGGCCTGGGTACGGCAGCAGCCCCGGCACAGGCTGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
||
| CDS TCA 72 bp | TGCGCCCAGCACTGCAGGCCCTGGCCAGTGCATGCGTaGGGGCAGCTGCAGACACTGCATACAGGAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CAQHCRPWPVHA*GQLQTLHTGRP Trigger: CGGCCTTCCTGTATGCAGTGTCTGCAGCTGCCCTCACGCATGCACTGGCCAGGGCCTGCAGTGCTGGGCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CCA 72 bp | GTTCTCAGGCCGCTCTTCACAGCCTTGATGCCCACGTaGGTGTTGTGGGCGTCAGCCCTCGCCCTCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VLRPLFTALMPT*VLWASALALRS Trigger: GGACCTGAGGGCGAGGGCTGACGCCCACAACACCCACGTGGGCATCAAGGCTGTGAAGAGCGGCCTGAGAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | TGCAACTGGAGTCTCGAGAACACACCCTGCCTGCCGTaGCCGGAGAGTACTTGCTGGGCCGGCAGAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CNWSLENTPCLP*PESTCWAGRSW Trigger: CCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | GCTGCTGCAACTGGAGTCTCGAGAACACACCCTGCCTaGCGTGCCCGGAGAGTACTTGCTGGGCCGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: AAATGVSRTHPA*RARRVLAGPAE Trigger: TTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | ATAGGCTGCTGCAACTGGAGTCTCGAGAACACACCCTaGCTGCCGTGCCCGGAGAGTACTTGCTGGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: IGCCNWSLENTP*LPCPESTCWAG Trigger: GCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CAA 72 bp | AGGCCGCTCTTCACAGCCTTGATGCCCACGTGGGTGTaGTGGGCGTCAGCCCTCGCCCTCAGGTCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RPLFTALMPTWV*WASALALRSLL Trigger: AAGCAAGGACCTGAGGGCGAGGGCTGACGCCCACAACACCCACGTGGGCATCAAGGCTGTGAAGAGCGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CAA 90 bp | ATGCCCACGTGGGTGTTGTGGGCGTCAGCCCTCGCCCTCAGGTCCTaGCTTCCTCTCTTGGGCCCCAGGAAGTTGCTGAGGAACTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: MPTWVLWASALALRS*LPLLGPRKLLRNLV Trigger: CACCAAGTTCCTCAGCAACTTCCTGGGGCCCAAGAGAGGAAGCAAGGACCTGAGGGCGAGGGCTGACGCCCACAACACCCACGTGGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | TCTGGGTGTCGTAGCCTCGCCCACAGCATAGGCTGCTaGAACTGGAGTCTCGAGAACACACCCTGCCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SGCRSLAHSIGC*NWSLENTPCLP Trigger: CGGCAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTATGCTGTGGGCGAGGCTACGACACCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | GGCTCTGGGTGTCGTAGCCTCGCCCACAGCATAGGCTaGTGCAACTGGAGTCTCGAGAACACACCCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GSGCRSLAHSIG*CNWSLENTPCL Trigger: CAGGCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTATGCTGTGGGCGAGGCTACGACACCCAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CAA 72 bp | CGAGAACACACCCTGCCTGCCGTGCCCGGAGAGTACTaGCTGGGCCGGCAGAAGCTGGGAGAATCTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: REHTLPAVPGEY*LGRQKLGESSM Trigger: CATGGAAGATTCTCCCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CAA 90 bp | GTTGTTCTCAGGCCGCTCTTCACAGCCTTGATGCCCACGTGGGTGTaGTGGGCGTCAGCCCTCGCCCTCAGGTCCTTGCTTCCTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: VVLRPLFTALMPTWV*WASALALRSLLPLL Trigger: CAAGAGAGGAAGCAAGGACCTGAGGGCGAGGGCTGACGCCCACAACACCCACGTGGGCATCAAGGCTGTGAAGAGCGGCCTGAGAACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | TTCAGCACCTGGCCGGTCTCGCGAAACGGGGAGAGCTaGTTCCAACAGGTACGAACAGCACAGGAGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: FSTWPVSRNGES*FQQVRTAQEPD Trigger: GTCAGGCTCCTGTGCTGTTCGTACCTGTTGGAAGCAGCTCTCCCCGTTTCGCGAGACCGGCCAGGTGCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | GAGAACACACCCTGCCTGCCGTGCCCGGAGAGTACTTaGTGGGCCGGCAGAAGCTGGGAGAATCTTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: ENTPCLPCPEST*WAGRSWENLPC Trigger: ACATGGAAGATTCTCCCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | CCTGGCCAGTGCATGCGTGAGGGCAGCTGCAGACACTaGATACAGGAAGGCCGTCTCCTTAAAGCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PGQCMREGSCRH*IQEGRLLKASL Trigger: CAGAGAGGCTTTAAGGAGACGGCCTTCCTGTATGCAGTGTCTGCAGCTGCCCTCACGCATGCACTGGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS GCA 72 bp | ACTGCAGGCCCTGGCCAGTGCATGCGTGAGGGCAGCTaGAGACACTGCATACAGGAAGGCCGTCTCCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: TAGPGQCMREGS*RHCIQEGRLLK Trigger: TTTAAGGAGACGGCCTTCCTGTATGCAGTGTCTGCAGCTGCCCTCACGCATGCACTGGCCAGGGCCTGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CCA 72 bp | AACACACCCTGCCTGCCGTGCCCGGAGAGTACTTGCTaGGCCGGCAGAAGCTGGGAGAATCTTCCATGTAGA | + |
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Preference number: 6 (lower is better) Translates to: NTPCLPCPESTC*AGRSWENLPCR Trigger: TCTACATGGAAGATTCTCCCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAGGCAGGGTGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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| CDS CAA 90 bp | GTGTTGTGGGCGTCAGCCCTCGCCCTCAGGTCCTTGCTTCCTCTCTaGGGCCCCAGGAAGTTGCTGAGGAACTTGGTGCTGTACTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VLWASALALRSLLPL*GPRKLLRNLVLYFR Trigger: TCTGAAGTACAGCACCAAGTTCCTCAGCAACTTCCTGGGGCCCAAGAGAGGAAGCAAGGACCTGAGGGCGAGGGCTGACGCCCACAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018630.3 |
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