Pregenerated sensors for WNT8B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036961Ensembl transcript IDs: ENSMUST00000041163.5
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTAGAGACTGCAGCCTCCTCCTGTCAGAATCTCTGGGCTAGGGAGTaGGAGGTCCCCCATTCTGGGTTCCTCTATTTCCGGGGGTCTCTA | + |
Preference number: 1 (lower is better) Translates to: VETAASSCQNLWARE*EVPHSGFLYFRGSL Trigger: TAGAGACCCCCGGAAATAGAGGAACCCAGAATGGGGGACCTCGCACTCCCTAGCCCAGAGATTCTGACAGGAGGAGGCTGCAGTCTCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 90 bp | AAGTGTCACTCGGTAGAGACTGCAGCCTCCTCCTGTCAGAATCTCTaGGCTAGGGAGTGCGAGGTCCCCCATTCTGGGTTCCTCTATTTC | + |
Preference number: 1 (lower is better) Translates to: KCHSVETAASSCQNL*ARECEVPHSGFLYF Trigger: GAAATAGAGGAACCCAGAATGGGGGACCTCGCACTCCCTAGCCCAGAGATTCTGACAGGAGGAGGCTGCAGTCTCTACCGAGTGACACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 90 bp | CAGAAGCACGATGCTTCCACGGTTCTGCTGAGAGCCCTGGAAAAATaGAGCTTCACGTTCCAATGTGGAACCCTTAGAGTTTTCAGTTGC | + |
Preference number: 1 (lower is better) Translates to: QKHDASTVLLRALEK*SFTFQCGTLRVFSC Trigger: GCAACTGAAAACTCTAAGGGTTCCACATTGGAACGTGAAGCTGCATTTTTCCAGGGCTCTCAGCAGAACCGTGGAAGCATCGTGCTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 90 bp | TTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAAAACCTTGATTTaGCTGTCTTGGCTCAGAAGATCAAAGCTCCCGCGGAGAAGGAGA | + |
Preference number: 1 (lower is better) Translates to: FLCPSLRGTDPKTLI*LSWLRRSKLPRRRR Trigger: TCTCCTTCTCCGCGGGAGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAGGTTTTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR TCA 90 bp | GGGGCATTTCACTCTTCCGATGTAGTCACTGTGGCTTTGGCATTGTaGGCTCAGCTCTGTACTTGCAGCAGAAGAGGAAGAAAGTATAGA | + |
Preference number: 1 (lower is better) Translates to: GAFHSSDVVTVALAL*AQLCTCSRRGRKYR Trigger: TCTATACTTTCTTCCTCTTCTGCTGCAAGTACAGAGCTGAGCTCACAATGCCAAAGCCACAGTGACTACATCGGAAGAGTGAAATGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR TCA 90 bp | TTATCAAGTAACTGTCCAGTAAGACCTGGGATTAACACGCACTGCTaGAAGACTAGGAAAAGGAGAGCTGAGGAGGCTCAGAAGGCACAG | + |
Preference number: 1 (lower is better) Translates to: LSSNCPVRPGINTHC*KTRKRRAEEAQKAQ Trigger: CTGTGCCTTCTGAGCCTCCTCAGCTCTCCTTTTCCTAGTCTTTCAGCAGTGCGTGTTAATCCCAGGTCTTACTGGACAGTTACTTGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 90 bp | AGGCCTGCCAGTGACATGATGTCACAGAGGAGTAACATTTGGCTCTaGGGTTACCTCTTACCCCTTATTCAAAGGCTTCTTCCCTTTTTC | + |
Preference number: 1 (lower is better) Translates to: RPASDMMSQRSNIWL*GYLLPLIQRLLPFF Trigger: GAAAAAGGGAAGAAGCCTTTGAATAAGGGGTAAGAGGTAACCCCAGAGCCAAATGTTACTCCTCTGTGACATCATGTCACTGGCAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 90 bp | AAATGCAGCTTCACGTTCCAATGTGGAACCCTTAGAGTTTTCAGTTaGACTGCCGGGTTTTCTTCTGTACACTTATCAAGTAACTGTCCA | + |
Preference number: 1 (lower is better) Translates to: KCSFTFQCGTLRVFS*TAGFSSVHLSSNCP Trigger: TGGACAGTTACTTGATAAGTGTACAGAAGAAAACCCGGCAGTGCAACTGAAAACTCTAAGGGTTCCACATTGGAACGTGAAGCTGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR TCA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGGCTGAGGCCTGCCAGTaGCATGATGTCACAGAGGAG | + |
Preference number: 2 (lower is better) Translates to: VSFCCASPSAISEVRTWEAEACQ*HDVTEE Trigger: CTCCTCTGTGACATCATGTCACTGGCAGGCCTCAGC...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR TCA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGTCTTTCCCTGGACCCTaGATATCTGAGAGGGGCCCT | + |
Preference number: 2 (lower is better) Translates to: VSFCCASPSAISEVRTWESFPGP*ISERGP Trigger: AGGGCCCCTCTCAGATATTCAGGGTCCAGGGAAAGA...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR TCA 90 bp | GACCAGAAGATGCACAGAGGTTTAACGAGGCCACTGTCCCCGAATGTCAGGGGCGTGGCTTTGGCATTGTaGGCTCAGCTCTGTACTTGC | + |
Preference number: 2 (lower is better) Translates to: DQKMHRGLTRPLSPNVRGVALAL*AQLCTC Trigger: GCAAGTACAGAGCTGAGCTCACAATGCCAAAGCCAC...GCCCCTGACATTCGGGGACAGTGGCCTCGTTAAACCTCTGTGCATCTTCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR CCA 90 bp | AAGTGGGGTGAGGAGACTCGCCTGTTCTCATCCTCTTTTCAGGAACAACTTGCACGAGGTCCCCCATTCTaGGTTCCTCTATTTCCGGGG | + |
Preference number: 2 (lower is better) Translates to: KWGEETRLFSSSFQEQLARGPPF*VPLFPG Trigger: CCCCGGAAATAGAGGAACCCAGAATGGGGGACCTCG...TGCAAGTTGTTCCTGAAAAGAGGATGAGAACAGGCGAGTCTCCTCACCCCACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR GCA 90 bp | TTAGAGGGTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACGGTTTCTCCTTCCTATaGCCTTCCTTAAGAGGCACA | + |
Preference number: 2 (lower is better) Translates to: LEGKFLLCFPLSNQRGQDGFSFL*PSLRGT Trigger: TGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAAACC...GTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTACCCTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CAA 90 bp | CTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAAAACCTTGATTaGCCTGTCTTGGCTCAGAAGATCAAAGCTCCCGCGGAGAAGGAG | + |
Preference number: 2 (lower is better) Translates to: LPMPFLKRHRSKNLD*PVLAQKIKAPAEKE Trigger: CTCCTTCTCCGCGGGAGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAGGTTTTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR GCA 90 bp | GCCTCCCACAAAGTTTCAATAGGACCAGAAGATGCACAGAGGTTTAACGAGGCCAAGACCCTGCCAGACTaGCCAAGGAAGAAACTCAGA | + |
Preference number: 2 (lower is better) Translates to: ASHKVSIGPEDAQRFNEAKTLPD*PRKKLR Trigger: TCTGAGTTTCTTCCTTGGGCAGTCTGGCAGGGTCTT...GGCCTCGTTAAACCTCTGTGCATCTTCTGGTCCTATTGAAACTTTGTGGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR GCA 90 bp | ATTAGGGTCTGGTTTCTCCTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAATCACTCGGTAGAGACTaGAGCCTCCTCCTGTCAGAA | + |
Preference number: 2 (lower is better) Translates to: IRVWFLLPMPFLKRHRSKSLGRD*SLLLSE Trigger: TTCTGACAGGAGGAGGCTGCAGTCTCTACCGAGTGA...TTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAAACCAGACCCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR CCA 90 bp | TTCTCCTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAAAACCTTGATTTGCAGGGAGGTGAAGCTATaGCGAGCAAGAGAAGGGCCA | + |
Preference number: 2 (lower is better) Translates to: FSFLCPSLRGTDPKTLICREVKL*RAREGP Trigger: TGGCCCTTCTCTTGCTCGCCATAGCTTCACCTCCCT...GCAAATCAAGGTTTTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR CCA 90 bp | GCCTCCCACAAAGTTTCAATAGGACCAGAAGATGCACAGAGGTTTAACGAGGCCCAGAGGAGTAACATTTaGCTCTGGGGTTACCTCTTA | + |
Preference number: 2 (lower is better) Translates to: ASHKVSIGPEDAQRFNEAQRSNI*LWGYLL Trigger: TAAGAGGTAACCCCAGAGCCAAATGTTACTCCTCTG...GGCCTCGTTAAACCTCTGTGCATCTTCTGGTCCTATTGAAACTTTGTGGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 72 bp | TCGGTAGAGACTGCAGCCTCCTCCTGTCAGAATCTCTaGGCTAGGGAGTGCGAGGTCCCCCATTCTGGGTTC | + |
Preference number: 3 (lower is better) Translates to: SVETAASSCQNL*ARECEVPHSGF Trigger: GAACCCAGAATGGGGGACCTCGCACTCCCTAGCCCAGAGATTCTGACAGGAGGAGGCTGCAGTCTCTACCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 72 bp | CTAGAAGCTCTGGCTCACAGGAGGGAGGTGAAGCTATaGCGAGCAAGAGAAGGGCCACGTCTTTCCCTGGAC | + |
Preference number: 3 (lower is better) Translates to: LEALAHRREVKL*RAREGPRLSLD Trigger: GTCCAGGGAAAGACGTGGCCCTTCTCTTGCTCGCCATAGCTTCACCTCCCTCCTGTGAGCCAGAGCTTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 72 bp | GAGGGAGGAGAGAGCTTAGAGGGTAAGTTTCTGCTGTaGTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTG | + |
Preference number: 3 (lower is better) Translates to: EGGESLEGKFLL*FPLSNQRGQDL Trigger: CAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTACCCTCTAAGCTCTCTCCTCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR CAA 90 bp | TTAGAGGGTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCCACTCCGAGACCCCTaGGGTGTGACTGGAGTATCT | + |
Preference number: 3 (lower is better) Translates to: LEGKFLLCFPLSNQRGQDPLRDP*GVTGVS Trigger: AGATACTCCAGTCACACCCAAGGGGTCTCGGAGTGG...GTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTACCCTCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 72 bp | CCCAATACCCATTTCATAAACAAGACCCTGCCAGACTaGCCAAGGAAGAAACTCAGAAGCGGCGCGGCGAGC | + |
Preference number: 3 (lower is better) Translates to: PNTHFINKTLPD*PRKKLRSGAAS Trigger: GCTCGCCGCGCCGCTTCTGAGTTTCTTCCTTGGGCAGTCTGGCAGGGTCTTGTTTATGAAATGGGTATTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR TCA 72 bp | ACTCAGAAGCGGCGCGGCGAGCTCTGGGCTTCCAAGTaGATGCATGAGCGGAAGGTTTATGTGGGTGATTTA | + |
Preference number: 3 (lower is better) Translates to: TQKRRGELWASK*MHERKVYVGDL Trigger: TAAATCACCCACATAAACCTTCCGCTCATGCATTCACTTGGAAGCCCAGAGCTCGCCGCGCCGCTTCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR TCA 72 bp | CCTAGGGCAAGGAACAGCTATGGGGAAGGTCTGGGCTaGGCTTGCTCTTCAGTTCTCCCAATACCCATTTCA | + |
Preference number: 3 (lower is better) Translates to: PRARNSYGEGLG*ACSSVLPIPIS Trigger: TGAAATGGGTATTGGGAGAACTGAAGAGCAAGCTCAGCCCAGACCTTCCCCATAGCTGTTCCTTGCCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 72 bp | TCTAACCTAGGGCAAGGAACAGCTATGGGGAAGGTCTaGGCTGAGCTTGCTCTTCAGTTCTCCCAATACCCA | + |
Preference number: 3 (lower is better) Translates to: SNLGQGTAMGKV*AELALQFSQYP Trigger: TGGGTATTGGGAGAACTGAAGAGCAAGCTCAGCCCAGACCTTCCCCATAGCTGTTCCTTGCCCTAGGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR TCA 72 bp | AACTGTCCAGTAAGACCTGGGATTAACACGCACTGCTaGAAGACTAGGAAAAGGAGAGCTGAGGAGGCTCAG | + |
Preference number: 3 (lower is better) Translates to: NCPVRPGINTHC*KTRKRRAEEAQ Trigger: CTGAGCCTCCTCAGCTCTCCTTTTCCTAGTCTTTCAGCAGTGCGTGTTAATCCCAGGTCTTACTGGACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR TCA 72 bp | TCTGAACACAGAAGCACGATGCTTCCACGGTTCTGCTaGGAGCCCTGGAAAAATGCAGCTTCACGTTCCAAT | + |
Preference number: 3 (lower is better) Translates to: SEHRSTMLPRFC*EPWKNAASRSN Trigger: ATTGGAACGTGAAGCTGCATTTTTCCAGGGCTCTCAGCAGAACCGTGGAAGCATCGTGCTTCTGTGTTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 72 bp | GATGCTTCCACGGTTCTGCTGAGAGCCCTGGAAAAATaGAGCTTCACGTTCCAATGTGGAACCCTTAGAGTT | + |
Preference number: 3 (lower is better) Translates to: DASTVLLRALEK*SFTFQCGTLRV Trigger: AACTCTAAGGGTTCCACATTGGAACGTGAAGCTGCATTTTTCCAGGGCTCTCAGCAGAACCGTGGAAGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 72 bp | AGAGGCACAGATCCAAAAACCTTGATTTGCCTGTCTTaGCTCAGAAGATCAAAGCTCCCGCGGAGAAGGAGA | + |
Preference number: 3 (lower is better) Translates to: RGTDPKTLICLS*LRRSKLPRRRR Trigger: TCTCCTTCTCCGCGGGAGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAGGTTTTTGGATCTGTGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 72 bp | CCTGCCAGTGACATGATGTCACAGAGGAGTAACATTTaGCTCTGGGGTTACCTCTTACCCCTTATTCAAAGG | + |
Preference number: 3 (lower is better) Translates to: PASDMMSQRSNI*LWGYLLPLIQR Trigger: CCTTTGAATAAGGGGTAAGAGGTAACCCCAGAGCCAAATGTTACTCCTCTGTGACATCATGTCACTGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 72 bp | TGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTaGGAGAAGGGACATATTTCAGACTGCAATAAATTA | + |
Preference number: 3 (lower is better) Translates to: CASPSAISEVRT*EKGHISDCNKL Trigger: TAATTTATTGCAGTCTGAAATATGTCCCTTCTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 72 bp | GAGTCTGACTTTAAAGTTCTGAACACAGAAGCACGATaGTTCCACGGTTCTGCTGAGAGCCCTGGAAAAATG | + |
Preference number: 3 (lower is better) Translates to: ESDFKVLNTEAR*FHGSAESPGKM Trigger: CATTTTTCCAGGGCTCTCAGCAGAACCGTGGAAGCATCGTGCTTCTGTGTTCAGAACTTTAAAGTCAGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR CAA 90 bp | GCCTCCCACAAAGTTTCAATAGGACCAGAAGATGCACAGAGGTTTAACGAGGCCCAAAGTGTTAGATTCTaGAATAATCAACAGCGGGGA | + |
Preference number: 3 (lower is better) Translates to: ASHKVSIGPEDAQRFNEAQSVRF*NNQQRG Trigger: TCCCCGCTGTTGATTATTCAAGAATCTAACACTTTG...GGCCTCGTTAAACCTCTGTGCATCTTCTGGTCCTATTGAAACTTTGTGGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR-3UTR CAA 90 bp | ATTAGGGTCTGGTTTCTCCTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAACTTGATTTGCCTGTCTaGGCTCAGAAGATCAAAGCT | + |
Preference number: 3 (lower is better) Translates to: IRVWFLLPMPFLKRHRSKLDLPV*AQKIKA Trigger: AGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAG...TTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAAACCAGACCCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR TCA 72 bp | CTTGCAGAATTTTATAACAGTTTTGAGACCTACGAGTaGGCTACAAAGTGTCACTCGGTAGAGACTGCAGCC | + |
Preference number: 3 (lower is better) Translates to: LAEFYNSFETYE*ATKCHSVETAA Trigger: GGCTGCAGTCTCTACCGAGTGACACTTTGTAGCTCACTCGTAGGTCTCAAAACTGTTATAAAATTCTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CCA 72 bp | AGTGACATGATGTCACAGAGGAGTAACATTTGGCTCTaGGGTTACCTCTTACCCCTTATTCAAAGGCTTCTT | + |
Preference number: 3 (lower is better) Translates to: SDMMSQRSNIWL*GYLLPLIQRLL Trigger: AAGAAGCCTTTGAATAAGGGGTAAGAGGTAACCCCAGAGCCAAATGTTACTCCTCTGTGACATCATGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR GCA 72 bp | TTCACGTTCCAATGTGGAACCCTTAGAGTTTTCAGTTaGACTGCCGGGTTTTCTTCTGTACACTTATCAAGT | + |
Preference number: 3 (lower is better) Translates to: FTFQCGTLRVFS*TAGFSSVHLSS Trigger: ACTTGATAAGTGTACAGAAGAAAACCCGGCAGTGCAACTGAAAACTCTAAGGGTTCCACATTGGAACGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR TCA 90 bp | GCTCACAGGAGGGAGGTGAAGCTATGGCGAGCAAGAGAAGGGCCACGTCTTTCCTGCAGAAGTACTTGGTaGCCCGCCGGCGGCACTGCT | + |
Preference number: 4 (lower is better) Translates to: AHRREVKLWRAREGPRLSCRSTW*PAGGTA Trigger: AGCAGTGCCGCCGGCGGGTCACCAAGTACTTCTGCA...GGAAAGACGTGGCCCTTCTCTTGCTCGCCATAGCTTCACCTCCCTCCTGTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | GCTCACAGGAGGGAGGTGAAGCTATGGCGAGCAAGAGAAGGGCCACGTCTTTCCTCTGCGTGGTGCAGCTaGCGGACACACCGTGGCACT | + |
Preference number: 4 (lower is better) Translates to: AHRREVKLWRAREGPRLSSAWCS*RTHRGT Trigger: AGTGCCACGGTGTGTCCGGCAGCTGCACCACGCAGA...GGAAAGACGTGGCCCTTCTCTTGCTCGCCATAGCTTCACCTCCCTCCTGTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | GACCAGAAGATGCACAGAGGTTTAACGAGGCCACTGTCCCCGAATGTCAGGGGCTCTGGGCGGCCGCTCTaGGCGGCTGCAGAAGTACTT | + |
Preference number: 4 (lower is better) Translates to: DQKMHRGLTRPLSPNVRGSGRPL*AAAEVL Trigger: AAGTACTTCTGCAGCCGCGCAGAGCGGCCGCCCAGA...GCCCCTGACATTCGGGGACAGTGGCCTCGTTAAACCTCTGTGCATCTTCTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | GCTCACAGGAGGGAGGTGAAGCTATGGCGAGCAAGAGAAGGGCCACGTCTTTCCGCAGAGCTGATGGCGTaGACAAATGCTGTCTCCCGG | + |
Preference number: 4 (lower is better) Translates to: AHRREVKLWRAREGPRLSAELMA*TNAVSR Trigger: CCGGGAGACAGCATTTGTGCACGCCATCAGCTCTGC...GGAAAGACGTGGCCCTTCTCTTGCTCGCCATAGCTTCACCTCCCTCCTGTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | CCTGCCTACTACAGACCTCTACCACTCCGAGACCCCTTGGGTGTGACTGGAGTACAGCGGCCACGCTGCTaGAGTAGACCAGGTAAGCCT | + |
Preference number: 4 (lower is better) Translates to: PAYYRPLPLRDPLGVTGVQRPRC*SRPGKP Trigger: AGGCTTACCTGGTCTACTCCAGCAGCGTGGCCGCTG...TACTCCAGTCACACCCAAGGGGTCTCGGAGTGGTAGAGGTCTGTAGTAGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGTCTTCAATACCACTCTaGGCGCCAGCGGCCACGCTG | + |
Preference number: 4 (lower is better) Translates to: VSFCCASPSAISEVRTWESSIPL*APAATL Trigger: CAGCGTGGCCGCTGGCGCCCAGAGTGGTATTGAAGA...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGCGGAACTCTGGCAGTTaGAACCAGCAGGTCTGCGTG | + |
Preference number: 4 (lower is better) Translates to: VSFCCASPSAISEVRTWERNSGS*NQQVCV Trigger: CACGCAGACCTGCTGGTTGCAACTGCCAGAGTTCCG...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | GCTCACAGGAGGGAGGTGAAGCTATGGCGAGCAAGAGAAGGGCCACGTCTTTCCTACTTCTCCTTCAAGTaGGCGCCTACCTCCCGGAAC | + |
Preference number: 4 (lower is better) Translates to: AHRREVKLWRAREGPRLSYFSFK*APTSRN Trigger: GTTCCGGGAGGTAGGCGCGCACTTGAAGGAGAAGTA...GGAAAGACGTGGCCCTTCTCTTGCTCGCCATAGCTTCACCTCCCTCCTGTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | CCTGCCTACTACAGACCTCTACCACTCCGAGACCCCTTGGGTGTGACTGGAGTACCAGCCTCATTGTTGTaGAGATTCATGGCTGCCCGG | + |
Preference number: 4 (lower is better) Translates to: PAYYRPLPLRDPLGVTGVPASLL*RFMAAR Trigger: CCGGGCAGCCATGAATCTGCACAACAATGAGGCTGG...TACTCCAGTCACACCCAAGGGGTCTCGGAGTGGTAGAGGTCTGTAGTAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | CTTGATTTGCCTGTCTTGGCTCAGAAGATCAAAGCTCCCGCGGAGAAGGAGACAGCACCAGCTCGCGGGTaGAGATGGAGCGGAAGGTGT | + |
Preference number: 4 (lower is better) Translates to: LDLPVLAQKIKAPAEKETAPARG*RWSGRC Trigger: ACACCTTCCGCTCCATCTCCACCCGCGAGCTGGTGC...TGTCTCCTTCTCCGCGGGAGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR TCA 90 bp | GCCTCCCACAAAGTTTCAATAGGACCAGAAGATGCACAGAGGTTTAACGAGGCCGTTTCATGGTGCCCTTaGCCGCCTTGCGGCCAGCCT | + |
Preference number: 4 (lower is better) Translates to: ASHKVSIGPEDAQRFNEAVSWCP*PPCGQP Trigger: AGGCTGGCCGCAAGGCGGTCAAGGGCACCATGAAAC...GGCCTCGTTAAACCTCTGTGCATCTTCTGGTCCTATTGAAACTTTGTGGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | GCCTCCCACAAAGTTTCAATAGGACCAGAAGATGCACAGAGGTTTAACGAGGCCTGCAACCAGCAGGTCTaGGTGGTGCAGCTGCCGGAC | + |
Preference number: 4 (lower is better) Translates to: ASHKVSIGPEDAQRFNEACNQQV*VVQLPD Trigger: GTCCGGCAGCTGCACCACGCAGACCTGCTGGTTGCA...GGCCTCGTTAAACCTCTGTGCATCTTCTGGTCCTATTGAAACTTTGTGGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | AAAACTGCCTCCCACAAAGTTTCAATAGGACCAGAAGATGCACAGAGGTTTAACGGCCCGCCGCGCTGTTaGCCGCGCCTTGCAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: KTASHKVSIGPEDAQRFNGPPRC*PRLAAG Trigger: ACCTGCTGCAAGGCGCGGGCAACAGCGCGGCGGGCC...GTTAAACCTCTGTGCATCTTCTGGTCCTATTGAAACTTTGTGGGAGGCAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | GCTGAGCTTGCTCTTCAGTTCTCCCAATACCCATTTCATAAACAAGACCCTGCCGCTCGCGGGTGGAGATaGAGCGGAAGGTGTCGGCGA | + |
Preference number: 4 (lower is better) Translates to: AELALQFSQYPFHKQDPAARGWR*SGRCRR Trigger: TCGCCGACACCTTCCGCTCCATCTCCACCCGCGAGC...GGCAGGGTCTTGTTTATGAAATGGGTATTGGGAGAACTGAAGAGCAAGCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | TTCTCCTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAAAACCTTGATTTGCACAGCCGGCGACAACTaGGGCGCTCCCAGCGACCCA | + |
Preference number: 4 (lower is better) Translates to: FSFLCPSLRGTDPKTLICTAGDN*GAPSDP Trigger: TGGGTCGCTGGGAGCGCCGCAGTTGTCGCCGGCTGT...GCAAATCAAGGTTTTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | CCTGCCTACTACAGACCTCTACCACTCCGAGACCCCTTGGGTGTGACTGGAGTAAGCACCAGTGAAACTTaGAGTTGCAGCTGGACACTG | + |
Preference number: 4 (lower is better) Translates to: PAYYRPLPLRDPLGVTGVSTSET*SCSWTL Trigger: CAGTGTCCAGCTGCAACTGCAAGTTTCACTGGTGCT...TACTCCAGTCACACCCAAGGGGTCTCGGAGTGGTAGAGGTCTGTAGTAGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGGAAGTCCACCATGGCTaGACAGCTGTAAAGCTCTCT | + |
Preference number: 4 (lower is better) Translates to: VSFCCASPSAISEVRTWEEVHHG*TAVKLS Trigger: AGAGAGCTTTACAGCTGTCCAGCCATGGTGGACTTC...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | ATTAGGGTCTGGTTTCTCCTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAACTGTTGCCCGCGCCTTaGAGCAGGTCCACCTTGAGC | + |
Preference number: 4 (lower is better) Translates to: IRVWFLLPMPFLKRHRSKLLPAP*SRSTLS Trigger: GCTCAAGGTGGACCTGCTGCAAGGCGCGGGCAACAG...TTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAAACCAGACCCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGCATCCACAAACTGCTTaGAAATTGCCTCTCCGAAGC | + |
Preference number: 4 (lower is better) Translates to: VSFCCASPSAISEVRTWEHPQTA*KLPLRS Trigger: GCTTCGGAGAGGCAATTTCCAAGCAGTTTGTGGATG...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | AAGTGGGGTGAGGAGACTCGCCTGTTCTCATCCTCTTTTCAGGAACAACTTGCACTGCCGGACACACCGTaGCACTTACACGTGCGTTTC | + |
Preference number: 4 (lower is better) Translates to: KWGEETRLFSSSFQEQLALPDTP*HLHVRF Trigger: GAAACGCACGTGTAAGTGCCACGGTGTGTCCGGCAG...TGCAAGTTGTTCCTGAAAAGAGGATGAGAACAGGCGAGTCTCCTCACCCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CAA 72 bp | CCTGCCTACTACAGACCTCTACCACTCCGAGACCCCTaGGGTGTGACTGGAGTATCTTTGGTGTTTAGGAAG | + |
Preference number: 4 (lower is better) Translates to: PAYYRPLPLRDP*GVTGVSLVFRK Trigger: CTTCCTAAACACCAAAGATACTCCAGTCACACCCAAGGGGTCTCGGAGTGGTAGAGGTCTGTAGTAGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR TCA 90 bp | CTTGATTTGCCTGTCTTGGCTCAGAAGATCAAAGCTCCCGCGGAGAAGGAGACAGGTGAAGGACACAAGTaGCTAGAAGAACGCACACGG | + |
Preference number: 4 (lower is better) Translates to: LDLPVLAQKIKAPAEKETGEGHK*LEERTR Trigger: CCGTGTGCGTTCTTCTAGTCACTTGTGTCCTTCACC...TGTCTCCTTCTCCGCGGGAGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR TCA 90 bp | TGCCCTTCCTTAAGAGGCACAGATCCAAAAACCTTGATTTGCCTGTCTTGGCTCCGGAGAAAGGCAGGGTaGGCGACTCAAACATTGAGA | + |
Preference number: 4 (lower is better) Translates to: CPSLRGTDPKTLICLSWLRRKAG*ATQTLR Trigger: TCTCAATGTTTGAGTCGCTCACCCTGCCTTTCTCCG...GAGCCAAGACAGGCAAATCAAGGTTTTTGGATCTGTGCCTCTTAAGGAAGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | AAGGTTTATGTGGGTGATTTACTAATCCTTGGCAGATTAACCTCAGTCAAATCAACTCTCGGCCCTCGGTaGCCAGCAGCCCCAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: KVYVGDLLILGRLTSVKSTLGPR*PAAPGS Trigger: AGACCCTGGGGCTGCTGGGCACCGAGGGCCGAGAGT...TGATTTGACTGAGGTTAATCTGCCAAGGATTAGTAAATCACCCACATAAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | AAGTGGGGTGAGGAGACTCGCCTGTTCTCATCCTCTTTTCAGGAACAACTTGCAAGTGAAACTTGCAGTTaGAGCTGGACACTGTCTCGG | + |
Preference number: 4 (lower is better) Translates to: KWGEETRLFSSSFQEQLASETCS*SWTLSR Trigger: CCGAGACAGTGTCCAGCTGCAACTGCAAGTTTCACT...TGCAAGTTGTTCCTGAAAAGAGGATGAGAACAGGCGAGTCTCCTCACCCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | AAGTGGGGTGAGGAGACTCGCCTGTTCTCATCCTCTTTTCAGGAACAACTTGCACTTCGAAGTCCACCATaGCTGGACAGCTGTAAAGCT | + |
Preference number: 4 (lower is better) Translates to: KWGEETRLFSSSFQEQLALRSPP*LDSCKA Trigger: AGCTTTACAGCTGTCCAGCCATGGTGGACTTCGAAG...TGCAAGTTGTTCCTGAAAAGAGGATGAGAACAGGCGAGTCTCCTCACCCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CAA 72 bp | CCCTTCCTTAAGAGGCACAGATCCAAAAACCTTGATTaGCCTGTCTTGGCTCAGAAGATCAAAGCTCCCGCG | + |
Preference number: 4 (lower is better) Translates to: PFLKRHRSKNLD*PVLAQKIKAPA Trigger: CGCGGGAGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAGGTTTTTGGATCTGTGCCTCTTAAGGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | GCTGAGCTTGCTCTTCAGTTCTCCCAATACCCATTTCATAAACAAGACCCTGCCAAACTGCTTGGAAATTaGCTCTCCGAAGCCCACGTT | + |
Preference number: 4 (lower is better) Translates to: AELALQFSQYPFHKQDPAKLLGN*LSEAHV Trigger: AACGTGGGCTTCGGAGAGGCAATTTCCAAGCAGTTT...GGCAGGGTCTTGTTTATGAAATGGGTATTGGGAGAACTGAAGAGCAAGCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR GCA 90 bp | AAGGTTTATGTGGGTGATTTACTAATCCTTGGCAGATTAACCTCAGTCAAATCAAGCAGGTCTGCGTGGTaGAGCTGCCGGACACACCGT | + |
Preference number: 4 (lower is better) Translates to: KVYVGDLLILGRLTSVKSSRSAW*SCRTHR Trigger: ACGGTGTGTCCGGCAGCTGCACCACGCAGACCTGCT...TGATTTGACTGAGGTTAATCTGCCAAGGATTAGTAAATCACCCACATAAACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | AAGGTTTATGTGGGTGATTTACTAATCCTTGGCAGATTAACCTCAGTCAAATCAACCAGCAGGTCTGCGTaGTGCAGCTGCCGGACACAC | + |
Preference number: 4 (lower is better) Translates to: KVYVGDLLILGRLTSVKSTSRSA*CSCRTH Trigger: GTGTGTCCGGCAGCTGCACCACGCAGACCTGCTGGT...TGATTTGACTGAGGTTAATCTGCCAAGGATTAGTAAATCACCCACATAAACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | AAGGAGACAAAGTTAGACGCTGCTATGATACAAAGTAATCAGAAAATGATTGCCACTTGCAGTTGCAGCTaGACACTGTCTCGGCGCGGC | + |
Preference number: 4 (lower is better) Translates to: KETKLDAAMIQSNQKMIATCSCS*TLSRRG Trigger: GCCGCGCCGAGACAGTGTCCAGCTGCAACTGCAAGT...GGCAATCATTTTCTGATTACTTTGTATCATAGCAGCGTCTAACTTTGTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR TCA 90 bp | AAGGTTTATGTGGGTGATTTACTAATCCTTGGCAGATTAACCTCAGTCAAATCAGCAGCAGGTCCACCTTaGGCGCCGCATGATACTTCT | + |
Preference number: 4 (lower is better) Translates to: KVYVGDLLILGRLTSVKSAAGPP*APHDTS Trigger: AGAAGTATCATGCGGCGCTCAAGGTGGACCTGCTGC...TGATTTGACTGAGGTTAATCTGCCAAGGATTAGTAAATCACCCACATAAACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR TCA 90 bp | AAGGAGACAAAGTTAGACGCTGCTATGATACAAAGTAATCAGAAAATGATTGCCACCTTGAGCGCCGCATaGTACTTCTCCTTCAAGTGC | + |
Preference number: 4 (lower is better) Translates to: KETKLDAAMIQSNQKMIATLSAA*YFSFKC Trigger: GCACTTGAAGGAGAAGTATCATGCGGCGCTCAAGGT...GGCAATCATTTTCTGATTACTTTGTATCATAGCAGCGTCTAACTTTGTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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3UTR CAA 72 bp | CTTTTCAGGAACAACTTGCAGAATTTTATAACAGTTTaGAGACCTACGAGTGAGCTACAAAGTGTCACTCGG | + |
Preference number: 4 (lower is better) Translates to: LFRNNLQNFITV*RPTSELQSVTR Trigger: CCGAGTGACACTTTGTAGCTCACTCGTAGGTCTCAAAACTGTTATAAAATTCTGCAAGTTGTTCCTGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CCA 90 bp | AAGGTTTATGTGGGTGATTTACTAATCCTTGGCAGATTAACCTCAGTCAAATCACGGTCCCAAGCAAACTaGTATTTACATTCTTCAATA | + |
Preference number: 4 (lower is better) Translates to: KVYVGDLLILGRLTSVKSRSQAN*YLHSSI Trigger: TATTGAAGAATGTAAATACCAGTTTGCTTGGGACCG...TGATTTGACTGAGGTTAATCTGCCAAGGATTAGTAAATCACCCACATAAACCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS TCA 90 bp | CAGCGCCTCTGGGCGGCCGCTCTGCGCGGCTGCAGAAGTACTTGGTaGCCCGCCGGCGGCACTGCTCGCAGCGGACCGCGCAGCACCAGT | + |
Preference number: 5 (lower is better) Translates to: QRLWAAALRGCRSTW*PAGGTARSGPRSTS Trigger: ACTGGTGCTGCGCGGTCCGCTGCGAGCAGTGCCGCCGGCGGGTCACCAAGTACTTCTGCAGCCGCGCAGAGCGGCCGCCCAGAGGCGCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 90 bp | GATGCACCAGCTCGCGGGTGGAGATGGAGCGGAAGGTGTCGGCGATaGCTCCGCGGCCCGCCGCGCTGTTGCCCGCGCCTTGCAGCAGGT | + |
Preference number: 5 (lower is better) Translates to: DAPARGWRWSGRCRR*LRGPPRCCPRLAAG Trigger: ACCTGCTGCAAGGCGCGGGCAACAGCGCGGCGGGCCGCGGAGCCATCGCCGACACCTTCCGCTCCATCTCCACCCGCGAGCTGGTGCATC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS GCA 90 bp | GGAGTTCTTTCCCGGTTTGTGCGCAGCGCCTCTGGGCGGCCGCTCTaGGCGGCTGCAGAAGTACTTGGTGACCCGCCGGCGGCACTGCTC | + |
Preference number: 5 (lower is better) Translates to: GVLSRFVRSASGRPL*AAAEVLGDPPAALL Trigger: GAGCAGTGCCGCCGGCGGGTCACCAAGTACTTCTGCAGCCGCGCAGAGCGGCCGCCCAGAGGCGCTGCGCACAAACCGGGAAAGAACTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 90 bp | AGTAGTCTGGGGAGTCCTCCAGATGCACCAGCTCGCGGGTGGAGATaGAGCGGAAGGTGTCGGCGATGGCTCCGCGGCCCGCCGCGCTGT | + |
Preference number: 5 (lower is better) Translates to: SSLGSPPDAPARGWR*SGRCRRWLRGPPRC Trigger: ACAGCGCGGCGGGCCGCGGAGCCATCGCCGACACCTTCCGCTCCATCTCCACCCGCGAGCTGGTGCATCTGGAGGACTCCCCAGACTACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 90 bp | AGTTGCAACCAGCAGGTCTGCGTGGTGCAGCTGCCGGACACACCGTaGCACTTACACGTGCGTTTCATGGTGCCCTTGACCGCCTTGCGG | + |
Preference number: 5 (lower is better) Translates to: SCNQQVCVVQLPDTP*HLHVRFMVPLTALR Trigger: CCGCAAGGCGGTCAAGGGCACCATGAAACGCACGTGTAAGTGCCACGGTGTGTCCGGCAGCTGCACCACGCAGACCTGCTGGTTGCAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGGCTGTTGCCCGCGCCTaGCAGCAGGTCCACCTTGAG | + |
Preference number: 5 (lower is better) Translates to: VSFCCASPSAISEVRTWEAVARA*QQVHLE Trigger: CTCAAGGTGGACCTGCTGCAAGGCGCGGGCAACAGC...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS GCA 90 bp | ATGGCTGCCCGGGCATCTTGTCCTGTCTCGAGGGCATCCACAAACTaGTTGGAAATTGCCTCTCCGAAGCCCACGTTGTCACTGCAGCCT | + |
Preference number: 5 (lower is better) Translates to: MAARASCPVSRASTN*LEIASPKPTLSLQP Trigger: AGGCTGCAGTGACAACGTGGGCTTCGGAGAGGCAATTTCCAAGCAGTTTGTGGATGCCCTCGAGACAGGACAAGATGCCCGGGCAGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | GCTCACAGGAGGGAGGTGAAGCTATGGCGAGCAAGAGAAGGGCCACGTCTTTCCCAAACTGCTTGGAAATaGCCTCTCCGAAGCCCACGT | + |
Preference number: 5 (lower is better) Translates to: AHRREVKLWRAREGPRLSQTAWK*PLRSPR Trigger: ACGTGGGCTTCGGAGAGGCAATTTCCAAGCAGTTTG...GGAAAGACGTGGCCCTTCTCTTGCTCGCCATAGCTTCACCTCCCTCCTGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | GGGTTCCTCTATTTCCGGGGGTCTCTAAAGGAAGCCGAGGACGAACAGGGGTGGGCATCCACAAACTGCTaGGAAATTGCCTCTCCGAAG | + |
Preference number: 5 (lower is better) Translates to: GFLYFRGSLKEAEDEQGWASTNC*EIASPK Trigger: CTTCGGAGAGGCAATTTCCAAGCAGTTTGTGGATGC...CCACCCCTGTTCGTCCTCGGCTTCCTTTAGAGACCCCCGGAAATAGAGGAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | CTTGATTTGCCTGTCTTGGCTCAGAAGATCAAAGCTCCCGCGGAGAAGGAGACACCGGAACTCTGGCAGTaGCAACCAGCAGGTCTGCGT | + |
Preference number: 5 (lower is better) Translates to: LDLPVLAQKIKAPAEKETPELWQ*QPAGLR Trigger: ACGCAGACCTGCTGGTTGCAACTGCCAGAGTTCCGG...TGTCTCCTTCTCCGCGGGAGCTTTGATCTTCTGAGCCAAGACAGGCAAATCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | GTAAGTTTCTGCTGTGCTTCCCCCTCAGCAATCAGCGAGGTCAGGACCTGGGAGAGACCAGGTAAGCCTTaGGACCGGTCATCAGAAAAT | + |
Preference number: 5 (lower is better) Translates to: VSFCCASPSAISEVRTWERPGKP*DRSSEN Trigger: ATTTTCTGATGACCGGTCCAAAGGCTTACCTGGTCT...CTCCCAGGTCCTGACCTCGCTGATTGCTGAGGGGGAAGCACAGCAGAAACTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | CTGAGGCCTGCCAGTGACATGATGTCACAGAGGAGTAACATTTGGCTCTGGGGTTTGCGGCCAGCCTCATaGTTGTGCAGATTCATGGCT | + |
Preference number: 5 (lower is better) Translates to: LRPASDMMSQRSNIWLWGLRPAS*LCRFMA Trigger: AGCCATGAATCTGCACAACAATGAGGCTGGCCGCAA...ACCCCAGAGCCAAATGTTACTCCTCTGTGACATCATGTCACTGGCAGGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | TTCTCCTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAAAACCTTGATTTGCCGTTTCATGGTGCCCTaGACCGCCTTGCGGCCAGCC | + |
Preference number: 5 (lower is better) Translates to: FSFLCPSLRGTDPKTLICRFMVP*TALRPA Trigger: GGCTGGCCGCAAGGCGGTCAAGGGCACCATGAAACG...GCAAATCAAGGTTTTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 90 bp | ATTTACATTCTTCAATACCACTCTGGGCGCCAGCGGCCACGCTGCTaGAGTAGACCAGGTAAGCCTTTGGACCGGTCATCAGAAAATTGT | + |
Preference number: 5 (lower is better) Translates to: IYILQYHSGRQRPRC*SRPGKPLDRSSENC Trigger: ACAATTTTCTGATGACCGGTCCAAAGGCTTACCTGGTCTACTCCAGCAGCGTGGCCGCTGGCGCCCAGAGTGGTATTGAAGAATGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | ATTAGGGTCTGGTTTCTCCTTCCTATGCCCTTCCTTAAGAGGCACAGATCCAAACGGCCAGCCTCATTGTaGTGCAGATTCATGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: IRVWFLLPMPFLKRHRSKRPASL*CRFMAA Trigger: GGCAGCCATGAATCTGCACAACAATGAGGCTGGCCG...TTTGGATCTGTGCCTCTTAAGGAAGGGCATAGGAAGGAGAAACCAGACCCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS-3UTR CAA 90 bp | AAAACTGCCTCCCACAAAGTTTCAATAGGACCAGAAGATGCACAGAGGTTTAACGAGTTCTTTCCCGGTTaGTGCGCAGCGCCTCTGGGC | + |
Preference number: 5 (lower is better) Translates to: KTASHKVSIGPEDAQRFNEFFPG*CAAPLG Trigger: GCCCAGAGGCGCTGCGCACAAACCGGGAAAGAACTC...GTTAAACCTCTGTGCATCTTCTGGTCCTATTGAAACTTTGTGGGAGGCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS TCA 72 bp | TGGGCGGCCGCTCTGCGCGGCTGCAGAAGTACTTGGTaGCCCGCCGGCGGCACTGCTCGCAGCGGACCGCGC | + |
Preference number: 6 (lower is better) Translates to: WAAALRGCRSTW*PAGGTARSGPR Trigger: GCGCGGTCCGCTGCGAGCAGTGCCGCCGGCGGGTCACCAAGTACTTCTGCAGCCGCGCAGAGCGGCCGCCCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 72 bp | GCTCGCGGGTGGAGATGGAGCGGAAGGTGTCGGCGATaGCTCCGCGGCCCGCCGCGCTGTTGCCCGCGCCTT | + |
Preference number: 6 (lower is better) Translates to: ARGWRWSGRCRR*LRGPPRCCPRL Trigger: AAGGCGCGGGCAACAGCGCGGCGGGCCGCGGAGCCATCGCCGACACCTTCCGCTCCATCTCCACCCGCGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CAA 90 bp | TGCGCAGCGCCTCTGGGCGGCCGCTCTGCGCGGCTGCAGAAGTACTaGGTGACCCGCCGGCGGCACTGCTCGCAGCGGACCGCGCAGCAC | + |
Preference number: 6 (lower is better) Translates to: CAAPLGGRSARLQKY*VTRRRHCSQRTAQH Trigger: GTGCTGCGCGGTCCGCTGCGAGCAGTGCCGCCGGCGGGTCACCAAGTACTTCTGCAGCCGCGCAGAGCGGCCGCCCAGAGGCGCTGCGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CAA 72 bp | AAGGTGTCGGCGATGGCTCCGCGGCCCGCCGCGCTGTaGCCCGCGCCTTGCAGCAGGTCCACCTTGAGCGCC | + |
Preference number: 6 (lower is better) Translates to: KVSAMAPRPAAL*PAPCSRSTLSA Trigger: GGCGCTCAAGGTGGACCTGCTGCAAGGCGCGGGCAACAGCGCGGCGGGCCGCGGAGCCATCGCCGACACCTT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CAA 72 bp | CCTCTGGGCGGCCGCTCTGCGCGGCTGCAGAAGTACTaGGTGACCCGCCGGCGGCACTGCTCGCAGCGGACC | + |
Preference number: 6 (lower is better) Translates to: PLGGRSARLQKY*VTRRRHCSQRT Trigger: GGTCCGCTGCGAGCAGTGCCGCCGGCGGGTCACCAAGTACTTCTGCAGCCGCGCAGAGCGGCCGCCCAGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS GCA 72 bp | TCCCGGTTTGTGCGCAGCGCCTCTGGGCGGCCGCTCTaGGCGGCTGCAGAAGTACTTGGTGACCCGCCGGCG | + |
Preference number: 6 (lower is better) Translates to: SRFVRSASGRPL*AAAEVLGDPPA Trigger: CGCCGGCGGGTCACCAAGTACTTCTGCAGCCGCGCAGAGCGGCCGCCCAGAGGCGCTGCGCACAAACCGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 72 bp | GGGAGTCCTCCAGATGCACCAGCTCGCGGGTGGAGATaGAGCGGAAGGTGTCGGCGATGGCTCCGCGGCCCG | + |
Preference number: 6 (lower is better) Translates to: GSPPDAPARGWR*SGRCRRWLRGP Trigger: CGGGCCGCGGAGCCATCGCCGACACCTTCCGCTCCATCTCCACCCGCGAGCTGGTGCATCTGGAGGACTCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CAA 72 bp | GATGGCTCCGCGGCCCGCCGCGCTGTTGCCCGCGCCTaGCAGCAGGTCCACCTTGAGCGCCGCATGATACTT | + |
Preference number: 6 (lower is better) Translates to: DGSAARRAVARA*QQVHLERRMIL Trigger: AAGTATCATGCGGCGCTCAAGGTGGACCTGCTGCAAGGCGCGGGCAACAGCGCGGCGGGCCGCGGAGCCATC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS TCA 72 bp | CCCGCGCCTTGCAGCAGGTCCACCTTGAGCGCCGCATaGTACTTCTCCTTCAAGTGCGCGCCTACCTCCCGG | + |
Preference number: 6 (lower is better) Translates to: PAPCSRSTLSAA*YFSFKCAPTSR Trigger: CCGGGAGGTAGGCGCGCACTTGAAGGAGAAGTATCATGCGGCGCTCAAGGTGGACCTGCTGCAAGGCGCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS GCA 72 bp | TTCAAGTGCGCGCCTACCTCCCGGAACTCTGGCAGTTaGAACCAGCAGGTCTGCGTGGTGCAGCTGCCGGAC | + |
Preference number: 6 (lower is better) Translates to: FKCAPTSRNSGS*NQQVCVVQLPD Trigger: GTCCGGCAGCTGCACCACGCAGACCTGCTGGTTGCAACTGCCAGAGTTCCGGGAGGTAGGCGCGCACTTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 72 bp | CAGCAGGTCTGCGTGGTGCAGCTGCCGGACACACCGTaGCACTTACACGTGCGTTTCATGGTGCCCTTGACC | + |
Preference number: 6 (lower is better) Translates to: QQVCVVQLPDTP*HLHVRFMVPLT Trigger: GGTCAAGGGCACCATGAAACGCACGTGTAAGTGCCACGGTGTGTCCGGCAGCTGCACCACGCAGACCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CAA 90 bp | GCTGCCCGGGCATCTTGTCCTGTCTCGAGGGCATCCACAAACTGCTaGGAAATTGCCTCTCCGAAGCCCACGTTGTCACTGCAGCCTCCC | + |
Preference number: 6 (lower is better) Translates to: AARASCPVSRASTNC*EIASPKPTLSLQPP Trigger: GGGAGGCTGCAGTGACAACGTGGGCTTCGGAGAGGCAATTTCCAAGCAGTTTGTGGATGCCCTCGAGACAGGACAAGATGCCCGGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 72 bp | CTTCAATACCACTCTGGGCGCCAGCGGCCACGCTGCTaGAGTAGACCAGGTAAGCCTTTGGACCGGTCATCA | + |
Preference number: 6 (lower is better) Translates to: LQYHSGRQRPRC*SRPGKPLDRSS Trigger: TGATGACCGGTCCAAAGGCTTACCTGGTCTACTCCAGCAGCGTGGCCGCTGGCGCCCAGAGTGGTATTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS GCA 72 bp | CGGGCATCTTGTCCTGTCTCGAGGGCATCCACAAACTaGTTGGAAATTGCCTCTCCGAAGCCCACGTTGTCA | + |
Preference number: 6 (lower is better) Translates to: RASCPVSRASTN*LEIASPKPTLS Trigger: TGACAACGTGGGCTTCGGAGAGGCAATTTCCAAGCAGTTTGTGGATGCCCTCGAGACAGGACAAGATGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 72 bp | AATGCTGTCTCCCGGTTAGCGCTTCGAAGTCCACCATaGCTGGACAGCTGTAAAGCTCTCTCGGGGCAATTC | + |
Preference number: 6 (lower is better) Translates to: NAVSRLALRSPP*LDSCKALSGQF Trigger: GAATTGCCCCGAGAGAGCTTTACAGCTGTCCAGCCATGGTGGACTTCGAAGCGCTAACCGGGAGACAGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CCA 72 bp | CATCTTGTCCTGTCTCGAGGGCATCCACAAACTGCTTaGAAATTGCCTCTCCGAAGCCCACGTTGTCACTGC | + |
Preference number: 6 (lower is better) Translates to: HLVLSRGHPQTA*KLPLRSPRCHC Trigger: GCAGTGACAACGTGGGCTTCGGAGAGGCAATTTCCAAGCAGTTTGTGGATGCCCTCGAGACAGGACAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |
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CDS CAA 72 bp | GCATCTTGTCCTGTCTCGAGGGCATCCACAAACTGCTaGGAAATTGCCTCTCCGAAGCCCACGTTGTCACTG | + |
Preference number: 6 (lower is better) Translates to: ASCPVSRASTNC*EIASPKPTLSL Trigger: CAGTGACAACGTGGGCTTCGGAGAGGCAATTTCCAAGCAGTTTGTGGATGCCCTCGAGACAGGACAAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041163.5 |