Pregenerated sensors for WNT8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012282Ensembl transcript IDs: ENSMUST00000012426.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCCTGGAACTAGAAGTACAGATGGCTCACAGCCATCAAGTGGGTaGTGTGAAGTGAGCCAGTCCTCTGGAGGGCCAGCCAGGGCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: SPGTRSTDGSQPSSG*CEVSQSSGGPARAL Trigger: AAGGGCCCTGGCTGGCCCTCCAGAGGACTGGCTCACTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGTACTTCTAGTTCCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR CCA 90 bp | TCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGCAGCACAGCTaGGTGGAACGGTATCTGAAACTTAATGGAATACGGTTCTTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: SFPLTSLPSHSQQHS*VERYLKLNGIRFFQ Trigger: CTGGAAGAACCGTATTCCATTAAGTTTCAGATACCGTTCCACCCAGCTGTGCTGCTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR-3UTR GCA 90 bp | CGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGCAGCACAAGTCCAAGAGTAACTaGGCAGGAAAGGCTGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RPQNSFPLTSLPSHSQQHKSKSN*AGKAGS Trigger: GGACCCAGCCTTTCCTGCGCAGTTACTCTTGGACTT...GTGCTGCTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR CAA 90 bp | CTGTGCACATTTGTGCCTGGTGGTCACAGAGACCAGGCAAGGACATaGGATCCCCTGGAACTAGAAGTACAGATGGCTCACAGCCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: LCTFVPGGHRDQART*DPLELEVQMAHSHQ Trigger: TTGATGGCTGTGAGCCATCTGTACTTCTAGTTCCAGGGGATCCAATGTCCTTGCCTGGTCTCTGTGACCACCAGGCACAAATGTGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTGTGCCTGGTGGTCACAGAGACCAGGCAAGGACATTGGATCCCCTGGAATCTTCCAGGCTCCTCTaGATGTGCACCCAAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TFVPGGHRDQARTLDPLESSRLL*MCTQIK Trigger: TTTGATTTGGGTGCACATTCAGAGGAGCCTGGAAGA...TTCCAGGGGATCCAATGTCCTTGCCTGGTCTCTGTGACCACCAGGCACAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAAACTCCCTCTTTAACAAGCTGCTTAAGTCCAAGAGTAACTGCGCAGGAAAGCTCCTGCGAAGAAGATaGTTAAAGATCATCCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: SNSLFNKLLKSKSNCAGKLLRRR*LKIIHL Trigger: TAGATGGATGATCTTTAAGCATCTTCTTCGCAGGAG...CTTTCCTGCGCAGTTACTCTTGGACTTAAGCAGCTTGTTAAAGAGGGAGTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR TCA 72 bp | AAGTACAGATGGCTCACAGCCATCAAGTGGGTGCTGTaGAGTGAGCCAGTCCTCTGGAGGGCCAGCCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KYRWLTAIKWVL*SEPVLWRASQG Trigger: GCCCTGGCTGGCCCTCCAGAGGACTGGCTCACTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGTACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR GCA 72 bp | ACTAGAAGTACAGATGGCTCACAGCCATCAAGTGGGTaGTGTGAAGTGAGCCAGTCCTCTGGAGGGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TRSTDGSQPSSG*CEVSQSSGGPA Trigger: GGCTGGCCCTCCAGAGGACTGGCTCACTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGTACTTCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR TCA 72 bp | CGCACTCCCAGCAGCACAGCTGGGTGGAACGGTATCTaGAACTTAATGGAATACGGTTCTTCCAGGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTPSSTAGWNGI*NLMEYGSSRLL Trigger: GAGGAGCCTGGAAGAACCGTATTCCATTAAGTTTCAGATACCGTTCCACCCAGCTGTGCTGCTGGGAGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR-3UTR CAA 90 bp | CGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGCAGCACCCTGTGATGTCCCAATaGTTTTCCAGTCTGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RPQNSFPLTSLPSHSQQHPVMSQ*FSSLCP Trigger: GGGACACAGACTGGAAAACAATTGGGACATCACAGG...GTGCTGCTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR GCA 72 bp | TCCCTCTTTAACAAGCTGCTTAAGTCCAAGAGTAACTaGGCAGGAAAGGCTGGGTCCACAAGCCAGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLFNKLLKSKSN*AGKAGSTSQEN Trigger: GTTCTCCTGGCTTGTGGACCCAGCCTTTCCTGCGCAGTTACTCTTGGACTTAAGCAGCTTGTTAAAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR CCA 72 bp | TTAACTTCTCTTCCCTCGCACTCCCAGCAGCACAGCTaGGTGGAACGGTATCTGAAACTTAATGGAATACGG | + |
|
Preference number: 3 (lower is better) Translates to: LTSLPSHSQQHS*VERYLKLNGIR Trigger: CCGTATTCCATTAAGTTTCAGATACCGTTCCACCCAGCTGTGCTGCTGGGAGTGCGAGGGAAGAGAAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR GCA 72 bp | GAGAACAAGGTTCCGATTTCACTCCTGCGAAGAAGATaGTTAAAGATCATCCATCTACCCCGCCTATCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ENKVPISLLRRR*LKIIHLPRLSW Trigger: CCACGATAGGCGGGGTAGATGGATGATCTTTAAGCATCTTCTTCGCAGGAGTGAAATCGGAACCTTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR CCA 72 bp | ATGTATAAATGTCTGTCTGTGCACATTTGTGCCTGGTaGTCACAGAGACCAGGCAAGGACATTGGATCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: MYKCLSVHICAW*SQRPGKDIGSP Trigger: AGGGGATCCAATGTCCTTGCCTGGTCTCTGTGACCACCAGGCACAAATGTGCACAGACAGACATTTATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR GCA 72 bp | AATGTGCACCCAAATCAAACTCCCTCTTTAACAAGCTaGTTAAGTCCAAGAGTAACTGCGCAGGAAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NVHPNQTPSLTS*LSPRVTAQERL Trigger: CAGCCTTTCCTGCGCAGTTACTCTTGGACTTAAGCAGCTTGTTAAAGAGGGAGTTTGATTTGGGTGCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGCTCACAGCCATCAAGTGGGTGCTGTGAAGTGAGCCAGTCCTCTGGAGAAGGAAGGCCTCCGTaGGAGCCCAGCGGCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TDGSQPSSGCCEVSQSSGEGRPP*EPSGPR Trigger: CCGAGGGCCGCTGGGCTCTCACGGAGGCCTTCCTTC...TCCAGAGGACTGGCTCACTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGGCAGCCCGCACTCCGTaGACAGGCGCCCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPQNSFPLTSLPSHSQAARTP*TGAHSC Trigger: GCAGCTGTGGGCGCCTGTGCACGGAGTGCGGGCTGC...CTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCGGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGCACTGTCCTTGCCCCTaGCCCGGGGCCTGGCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPQNSFPLTSLPSHSQHCPCP*PGAWHY Trigger: GTAGTGCCAGGCCCCGGGGCAGGGGCAAGGACAGTG...CTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCGGGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | CTAGGCCAGAAGTTCAGGCTCTATCTCCACTGTCCTGCAACTAGGCAGCACGTGCTCCTCTCCTCCACCTaGAGCCCGCACTCCGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGQKFRLYLHCPATRQHVLLSST*SPHSVH Trigger: GTGCACGGAGTGCGGGCTGCAGGTGGAGGAGAGGAG...CACGTGCTGCCTAGTTGCAGGACAGTGGAGATAGAGCCTGAACTTCTGGCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | CGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGCAGCACACTCCCTCCCCTCTGTaGCCTGGATGCTCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPQNSFPLTSLPSHSQQHTPSPL*PGCSGW Trigger: CCAGCCTGAGCATCCAGGGCACAGAGGGGAGGGAGT...GTGCTGCTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | GAGCCATCTCTCCCGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACCGGCCCTGTTGTTGTaGAGGTTCACCAGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPSLPPPEFLSFNFSSLAPALLL*RFTRAL Trigger: CAGAGCCCTGGTGAACCTTCACAACAACAGGGCCGG...TGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCGGGAGAGATGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | ATCCATCTACCCCGCCTATCGTGGAAGGTCTACAGGCTAACCCACCTATCGTGGCCCTCACTGCCAGTCTaGCGGCCCTGTTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHLPRLSWKVYRLTHLSWPSLPV*RPCCCE Trigger: TTCACAACAACAGGGCCGGCAGACTGGCAGTGAGGG...CCACGATAGGTGGGTTAGCCTGTAGACCTTCCACGATAGGCGGGGTAGATGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | ACAGATGGCTCACAGCCATCAAGTGGGTGCTGTGAAGTGAGCCAGTCCTCTGGAAGTTGCAGTCACAGCTaGTCACGGCCTCTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDGSQPSSGCCEVSQSSGSCSHS*SRPLLS Trigger: GGAGAGCAGAGGCCGTGAGCAGCTGTGACTGCAACT...TCCAGAGGACTGGCTCACTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | AACTTCTCTTCCCTCGCACTCCCAGCAGCACAGCTGGGTGGAACGGTATCTGAACAGGAAGTTGTTCACTaGCCAGGCAGAAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFSSLALPAAQLGGTVSEQEVVH*PGRSTQ Trigger: CTGGGTGCTTCTGCCTGGTCAGTGAACAACTTCCTG...TTCAGATACCGTTCCACCCAGCTGTGCTGCTGGGAGTGCGAGGGAAGAGAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGCCAGAAGTTCAGGCTCTATCTCCACTGTCCTGCAACTAGGCAGCACGTGTCTTCGATGCCAATCTaGGCTCCCAAGGCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGQKFRLYLHCPATRQHVSSMPI*APKATL Trigger: CAGTGTGGCCTTGGGAGCTCAGATTGGCATCGAAGA...CACGTGCTGCCTAGTTGCAGGACAGTGGAGATAGAGCCTGAACTTCTGGCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | ACATTGGATCCCCTGGAACTAGAAGTACAGATGGCTCACAGCCATCAAGTGGGTGGGCTGGATAGCACATaGCCGCAGCCACCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLDPLELEVQMAHSHQVGGLDST*PQPPTA Trigger: TGCTGTGGGTGGCTGCGGGCATGTGCTATCCAGCCC...ACCCACTTGATGGCTGTGAGCCATCTGTACTTCTAGTTCCAGGGGATCCAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACTCCCTCTTTAACAAGCTGCTTAAGTCCAAGAGTAACTGCGCAGGAAAGACCAGGCACTGTCCTTaGCCCTGCCCCGGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSLFNKLLKSKSNCAGKTRHCP*PCPGAW Trigger: CCAGGCCCCGGGGCAGGGGCAAGGACAGTGCCTGGT...CTTTCCTGCGCAGTTACTCTTGGACTTAAGCAGCTTGTTAAAGAGGGAGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CCA 90 bp | AGTACAGATGGCTCACAGCCATCAAGTGGGTGCTGTGAAGTGAGCCAGTCCTCTCTCCCAAGGCCACACTaGCGGTGTAGGTCAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: STDGSQPSSGCCEVSQSSLPRPH*RCRSDR Trigger: CCTATCTGACCTACACCGCCAGTGTGGCCTTGGGAG...AGAGGACTGGCTCACTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGCTCACAGCCATCAAGTGGGTGCTGTGAAGTGAGCCAGTCCTCTGGATGCAGCCAACACGTCTaGATGCTGCAGCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDGSQPSSGCCEVSQSSGCSQHV*MLQLPE Trigger: CTCAGGAAGCTGCAGCATCCAGACGTGTTGGCTGCA...TCCAGAGGACTGGCTCACTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | ACATTGGATCCCCTGGAACTAGAAGTACAGATGGCTCACAGCCATCAAGTGGGTGGCTGGCGTTGCGGTTaGAGTAGTCAGGAGACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLDPLELEVQMAHSHQVGGWRCG*SSQETP Trigger: AGGGGTCTCCTGACTACTGCAACCGCAACGCCAGCC...ACCCACTTGATGGCTGTGAGCCATCTGTACTTCTAGTTCCAGGGGATCCAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CCA 90 bp | AGCCATCTCTCCCGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACGGTTCACCAGGGCTCTaGCATCCTTCCCTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLSRPQNSFPLTSLPSHGSPGL*HPSLSP Trigger: TGGAGAAAGGGAAGGATGCCAGAGCCCTGGTGAACC...GTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCGGGAGAGATGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | ACATTTGTGCCTGGTGGTCACAGAGACCAGGCAAGGACATTGGATCCCCTGGAAGATGCTGCAGCTTCCTaGGATGCCATGACACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFVPGGHRDQARTLDPLEDAAAS*DAMTLA Trigger: TGCAAGTGTCATGGCATCTCAGGAAGCTGCAGCATC...TTCCAGGGGATCCAATGTCCTTGCCTGGTCTCTGTGACCACCAGGCACAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGCCCCAGATCCAGCCATaGCCACCTGTTTTTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRPQNSFPLTSLPSHSQPQIQP*PPVFPF Trigger: AAATGGAAAAACAGGTGGCCATGGCTGGATCTGGGG...CTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCGGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGGCGCGCGGTCATACTTaGCCTTTAGGTAATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRPQNSFPLTSLPSHSQARGHT*PLGNFP Trigger: TGGGAAATTACCTAAAGGCCAAGTATGACCGCGCGC...CTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCGGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| 3UTR CAA 72 bp | TTTGTGCCTGGTGGTCACAGAGACCAGGCAAGGACATaGGATCCCCTGGAACTAGAAGTACAGATGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVPGGHRDQART*DPLELEVQMAH Trigger: GTGAGCCATCTGTACTTCTAGTTCCAGGGGATCCAATGTCCTTGCCTGGTCTCTGTGACCACCAGGCACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | TCCCCTGGAACTAGAAGTACAGATGGCTCACAGCCATCAAGTGGGTGCTGTGAAGCAGAGCGGATGGCATaGATGAAGGATGTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGTRSTDGSQPSSGCCEAERMA*MKDVSL Trigger: GAGAGAGACATCCTTCATTCATGCCATCCGCTCTGC...TTCACAGCACCCACTTGATGGCTGTGAGCCATCTGTACTTCTAGTTCCAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | CCCCTGGAACTAGAAGTACAGATGGCTCACAGCCATCAAGTGGGTGCTGTGAAGAACACGTCTGGATGCTaGAGCTTCCTGAGATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLELEVQMAHSHQVGAVKNTSGC*SFLRCH Trigger: ATGGCATCTCAGGAAGCTGCAGCATCCAGACGTGTT...CTTCACAGCACCCACTTGATGGCTGTGAGCCATCTGTACTTCTAGTTCCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAAGAGTAACTGCGCAGGAAAGGCTGGGTCCACAAGCCAGGAGAACAAGTTGCCAGCCCTTAGCTaGCGCTTGTCCATCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KSKSNCAGKAGSTSQENKLPALS*RLSISI Trigger: AATTGAGATGGACAAGCGCCAGCTAAGGGCTGGCAA...CTTGTTCTCCTGGCTTGTGGACCCAGCCTTTCCTGCGCAGTTACTCTTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | TCCCCTGGAACTAGAAGTACAGATGGCTCACAGCCATCAAGTGGGTGCTGTGAACAGCCTGTTGTGGGTTaGAAACTGAAAAGCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGTRSTDGSQPSSGCCEQPVVG*KLKSML Trigger: GAGCATGCTTTTCAGTTTTCAACCCACAACAGGCTG...TTCACAGCACCCACTTGATGGCTGTGAGCCATCTGTACTTCTAGTTCCAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | AACAAGGTTCCGATTTCACTCCTGCGAAGAAGATGCTTAAAGATCATCCATCTAGCCAACACGTCTGGATaGTGCAGCTTCCTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NKVPISLLRRRCLKIIHLANTSG*CSFLRC Trigger: GCATCTCAGGAAGCTGCAGCATCCAGACGTGTTGGC...TAGATGGATGATCTTTAAGCATCTTCTTCGCAGGAGTGAAATCGGAACCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | AATCAAACTCCCTCTTTAACAAGCTGCTTAAGTCCAAGAGTAACTGCGCAGGAAGTGTGCAGTAGTATCTaGTCACCACACGCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NQTPSLTSCLSPRVTAQEVCSSI*SPHACT Trigger: AGTGCAGGCGTGTGGTGAGCAGATACTACTGCACAC...TTCCTGCGCAGTTACTCTTGGACTTAAGCAGCTTGTTAAAGAGGGAGTTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR GCA 90 bp | AATCAAACTCCCTCTTTAACAAGCTGCTTAAGTCCAAGAGTAACTGCGCAGGAAGCAGTTCTTGGTGACTaGGTACATGATGGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQTPSLTSCLSPRVTAQEAVLGD*VHDGSR Trigger: TCTGCTGCCATCATGTACGCAGTCACCAAGAACTGC...TTCCTGCGCAGTTACTCTTGGACTTAAGCAGCTTGTTAAAGAGGGAGTTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | AACAAGGTTCCGATTTCACTCCTGCGAAGAAGATGCTTAAAGATCATCCATCTACTTCCTGAGATGCCATaGCACTTGCAGGTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKVPISLLRRRCLKIIHLLPEMP*HLQVLF Trigger: GAAAAGGACCTGCAAGTGTCATGGCATCTCAGGAAG...TAGATGGATGATCTTTAAGCATCTTCTTCGCAGGAGTGAAATCGGAACCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR TCA 90 bp | AACAAGGTTCCGATTTCACTCCTGCGAAGAAGATGCTTAAAGATCATCCATCTATTGTGGGTTGAAAACTaGAAAGCATGCTCAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: NKVPISLLRRRCLKIIHLLWVEN*KACSGQ Trigger: TTGTCCTGAGCATGCTTTTCAGTTTTCAACCCACAA...TAGATGGATGATCTTTAAGCATCTTCTTCGCAGGAGTGAAATCGGAACCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 90 bp | TCCACCTGCAGCCCGCACTCCGTGCACAGGCGCCCACAGCTGCGCTaGTCCCGCCGGGAAGCACTGCGGGCATTCTGCAGGCACTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STCSPHSVHRRPQLR*SRREALRAFCRHSL Trigger: GAGGGAGTGCCTGCAGAATGCCCGCAGTGCTTCCCGGCGGGAGCAGCGCAGCTGTGGGCGCCTGTGCACGGAGTGCGGGCTGCAGGTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 90 bp | TCTCCTCCACCTGCAGCCCGCACTCCGTGCACAGGCGCCCACAGCTaGGCTGCTCCCGCCGGGAAGCACTGCGGGCATTCTGCAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPPPAARTPCTGAHS*AAPAGKHCGHSAGT Trigger: AGTGCCTGCAGAATGCCCGCAGTGCTTCCCGGCGGGAGCAGCGCAGCTGTGGGCGCCTGTGCACGGAGTGCGGGCTGCAGGTGGAGGAGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 90 bp | AGTGCAACACCACTGAAAGTTGCAGTCACAGCTGCTCACGGCCTCTaGTCTCCTCTCCTCCACCTGCAGCCCGCACTCCGTGCACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SATPLKVAVTAAHGL*SPLLHLQPALRAQA Trigger: CGCCTGTGCACGGAGTGCGGGCTGCAGGTGGAGGAGAGGAGAGCAGAGGCCGTGAGCAGCTGTGACTGCAACTTTCAGTGGTGTTGCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CAA 90 bp | TTAACTTCTCTTCCCTCGCACTCCCAGCAGCACAGCTGGGTGGAACGGTATCTGCGGCCCTCGGCTCTGTaGCCAGCCCTTAGCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTSLPSHSQQHSWVERYLRPSAL*PALSWR Trigger: GCGCCAGCTAAGGGCTGGCAACAGAGCCGAGGGCCG...CAGATACCGTTCCACCCAGCTGTGCTGCTGGGAGTGCGAGGGAAGAGAAGTTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 90 bp | GCAGGCACTCCCTCCCCTCTGTGCCCTGGATGCTCAGGCTGGCGTTaGGGTTGCAGTAGTCAGGAGACCCCTCTAAGAAGATCAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGTPSPLCPGCSGWR*GCSSQETPLRRSAQ Trigger: CTGAGCTGATCTTCTTAGAGGGGTCTCCTGACTACTGCAACCGCAACGCCAGCCTGAGCATCCAGGGCACAGAGGGGAGGGAGTGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 90 bp | ACTCCCTCCCCTCTGTGCCCTGGATGCTCAGGCTGGCGTTGCGGTTaGAGTAGTCAGGAGACCCCTCTAAGAAGATCAGCTCAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPSPLCPGCSGWRCG*SSQETPLRRSAQPL Trigger: CAGAGGCTGAGCTGATCTTCTTAGAGGGGTCTCCTGACTACTGCAACCGCAACGCCAGCCTGAGCATCCAGGGCACAGAGGGGAGGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CCA 90 bp | CATTCTGCAGGCACTCCCTCCCCTCTGTGCCCTGGATGCTCAGGCTaGCGTTGCGGTTGCAGTAGTCAGGAGACCCCTCTAAGAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: HSAGTPSPLCPGCSG*RCGCSSQETPLRRS Trigger: TGATCTTCTTAGAGGGGTCTCCTGACTACTGCAACCGCAACGCCAGCCTGAGCATCCAGGGCACAGAGGGGAGGGAGTGCCTGCAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS TCA 90 bp | GTAGGTCAGATAGGCCTTGGGACGGGTTATCAGGAAGTTGTTCACTaGCCAGGCAGAAGCACCCAGGGCTGGATAGCACATGCCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGQIGLGTGYQEVVH*PGRSTQGWIAHARS Trigger: GCTGCGGGCATGTGCTATCCAGCCCTGGGTGCTTCTGCCTGGTCAGTGAACAACTTCCTGATAACCCGTCCCAAGGCCTATCTGACCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS TCA 90 bp | GTGTGCAGTAGTATCTGCTCACCACACGCCTGCACTGGCCACACTTaGCAGTGCAACACCACTGAAAGTTGCAGTCACAGCTGCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: VCSSICSPHACTGHT*QCNTTESCSHSCSR Trigger: CCGTGAGCAGCTGTGACTGCAACTTTCAGTGGTGTTGCACTGTCAAGTGTGGCCAGTGCAGGCGTGTGGTGAGCAGATACTACTGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CCA 90 bp | GGAACTTACACTCTTCGATGCCAATCTGAGCTCCCAAGGCCACACTaGCGGTGTAGGTCAGATAGGCCTTGGGACGGGTTATCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTYTLRCQSELPRPH*RCRSDRPWDGLSGS Trigger: ACTTCCTGATAACCCGTCCCAAGGCCTATCTGACCTACACCGCCAGTGTGGCCTTGGGAGCTCAGATTGGCATCGAAGAGTGTAAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CAA 90 bp | CGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACTCCCAGCAGCACCGGGTTATCAGGAAGTaGTTCACTGACCAGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPQNSFPLTSLPSHSQQHRVIRK*FTDQAE Trigger: TTCTGCCTGGTCAGTGAACAACTTCCTGATAACCCG...GTGCTGCTGGGAGTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCCAAGAGTAACTGCGCAGGAAAGGCTGGGTCCACAAGCCAGGAGAACAAGCCCATGCTGCAGTTCTaGGTGACTGCGTACATGATG | + |
|
Preference number: 5 (lower is better) Translates to: KSKSNCAGKAGSTSQENKPMLQF*VTAYMM Trigger: CATCATGTACGCAGTCACCAAGAACTGCAGCATGGG...CTTGTTCTCCTGGCTTGTGGACCCAGCCTTTCCTGCGCAGTTACTCTTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CAA 90 bp | ACATTTGTGCCTGGTGGTCACAGAGACCAGGCAAGGACATTGGATCCCCTGGAAGCCCTTAGCTGGCGCTaGTCCATCTCAATTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFVPGGHRDQARTLDPLEALSWR*SISIFS Trigger: GCTGAAAATTGAGATGGACAAGCGCCAGCTAAGGGC...TTCCAGGGGATCCAATGTCCTTGCCTGGTCTCTGTGACCACCAGGCACAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CCA 90 bp | TTAGCTGGCGCTTGTCCATCTCAATTTTCAGCGCGCGGTCATACTTaGCCTTTAGGTAATTTCCCATCTGCCGGAAGTCAGCCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAGACPSQFSARGHT*PLGNFPSAGSQPAA Trigger: TGCAGCTGGCTGACTTCCGGCAGATGGGAAATTACCTAAAGGCCAAGTATGACCGCGCGCTGAAAATTGAGATGGACAAGCGCCAGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS-3UTR CAA 90 bp | AGCCATCTCTCCCGCCCCCAGAATTCCTTTCCTTTAACTTCTCTTCCCTCGCACGCAGCCTGTTGTGGGTaGAAAACTGAAAAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHLSRPQNSFPLTSLPSHAACCG*KTEKHA Trigger: AGCATGCTTTTCAGTTTTCAACCCACAACAGGCTGC...GTGCGAGGGAAGAGAAGTTAAAGGAAAGGAATTCTGGGGGCGGGAGAGATGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 72 bp | AGCCCGCACTCCGTGCACAGGCGCCCACAGCTGCGCTaGTCCCGCCGGGAAGCACTGCGGGCATTCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPHSVHRRPQLR*SRREALRAFCR Trigger: CCTGCAGAATGCCCGCAGTGCTTCCCGGCGGGAGCAGCGCAGCTGTGGGCGCCTGTGCACGGAGTGCGGGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 72 bp | CTGCGCTGCTCCCGCCGGGAAGCACTGCGGGCATTCTaGAGGCACTCCCTCCCCTCTGTGCCCTGGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRCSRREALRAF*RHSLPSVPWML Trigger: GAGCATCCAGGGCACAGAGGGGAGGGAGTGCCTGCAGAATGCCCGCAGTGCTTCCCGGCGGGAGCAGCGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 72 bp | CCCTGCCCCGGGGCCTGGCACTACCTACAGGGCGTGTaGAGTAGTATCTGCTCACCACACGCCTGCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PCPGAWHYLQGV*SSICSPHACTG Trigger: GCCAGTGCAGGCGTGTGGTGAGCAGATACTACTGCACACGCCCTGTAGGTAGTGCCAGGCCCCGGGGCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CCA 72 bp | GGCACTCCCTCCCCTCTGTGCCCTGGATGCTCAGGCTaGCGTTGCGGTTGCAGTAGTCAGGAGACCCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GTPSPLCPGCSG*RCGCSSQETPL Trigger: TAGAGGGGTCTCCTGACTACTGCAACCGCAACGCCAGCCTGAGCATCCAGGGCACAGAGGGGAGGGAGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CAA 72 bp | CGGCCCTCGGCTCTGTTGCCAGCCCTTAGCTGGCGCTaGTCCATCTCAATTTTCAGCGCGCGGTCATACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPSALLPALSWR*SISIFSARSYL Trigger: CAAGTATGACCGCGCGCTGAAAATTGAGATGGACAAGCGCCAGCTAAGGGCTGGCAACAGAGCCGAGGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CCA 72 bp | TTCCTGAGATGCCATGACACTTGCAGGTCCTTTTCGTaGAGGCCCTCACTGCCAGTCTGCCGGCCCTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLRCHDTCRSFS*RPSLPVCRPCC Trigger: ACAACAGGGCCGGCAGACTGGCAGTGAGGGCCTCCACGAAAAGGACCTGCAAGTGTCATGGCATCTCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS TCA 72 bp | GTGACTGCGTACATGATGGCAGCAGAGCGGATGGCATaGATGAAGGATGTCTCTCTCGTGGCAGCTCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTAYMMAAERMA*MKDVSLVAARS Trigger: GCTGCGAGCTGCCACGAGAGAGACATCCTTCATTCATGCCATCCGCTCTGCTGCCATCATGTACGCAGTCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CCA 72 bp | ACTCTTCGATGCCAATCTGAGCTCCCAAGGCCACACTaGCGGTGTAGGTCAGATAGGCCTTGGGACGGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: TLRCQSELPRPH*RCRSDRPWDGL Trigger: TAACCCGTCCCAAGGCCTATCTGACCTACACCGCCAGTGTGGCCTTGGGAGCTCAGATTGGCATCGAAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CAA 72 bp | CAGCCGCAGTTTTCCAAGTCACCCATGCTGCAGTTCTaGGTGACTGCGTACATGATGGCAGCAGAGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: QPQFSKSPMLQF*VTAYMMAAERM Trigger: CATCCGCTCTGCTGCCATCATGTACGCAGTCACCAAGAACTGCAGCATGGGTGACTTGGAAAACTGCGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS TCA 72 bp | ATAGGCCTTGGGACGGGTTATCAGGAAGTTGTTCACTaGCCAGGCAGAAGCACCCAGGGCTGGATAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: IGLGTGYQEVVH*PGRSTQGWIAH Trigger: ATGTGCTATCCAGCCCTGGGTGCTTCTGCCTGGTCAGTGAACAACTTCCTGATAACCCGTCCCAAGGCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS TCA 72 bp | CTCGTGGCAGCTCGCAGCCTGTTGTGGGTTGAAAACTaGAAAGCATGCTCAGGACAATTCCACCGTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LVAARSLLWVEN*KACSGQFHRSQ Trigger: CTGGGAACGGTGGAATTGTCCTGAGCATGCTTTTCAGTTTTCAACCCACAACAGGCTGCGAGCTGCCACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS GCA 72 bp | GTTTTCCAAGTCACCCATGCTGCAGTTCTTGGTGACTaGGTACATGATGGCAGCAGAGCGGATGGCATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VFQVTHAAVLGD*VHDGSRADGMN Trigger: ATTCATGCCATCCGCTCTGCTGCCATCATGTACGCAGTCACCAAGAACTGCAGCATGGGTGACTTGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||
| CDS CCA 72 bp | GCTTGTCCATCTCAATTTTCAGCGCGCGGTCATACTTaGCCTTTAGGTAATTTCCCATCTGCCGGAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ACPSQFSARGHT*PLGNFPSAGSQ Trigger: CTGACTTCCGGCAGATGGGAAATTACCTAAAGGCCAAGTATGACCGCGCGCTGAAAATTGAGATGGACAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012426.3 |
||