Pregenerated sensors for WNT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033227Ensembl transcript IDs: ENSMUST00000006716.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATCTCATGACCGTTAATTTCATCAGGAGTCACAGAAAGACAGAATaGCATAAAAGTTCACACAGACGCCTGACAACTAAGCCCACTACT | + |
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Preference number: 1 (lower is better) Translates to: NLMTVNFIRSHRKTE*HKSSHRRLTTKPTT Trigger: AGTAGTGGGCTTAGTTGTCAGGCGTCTGTGTGAACTTTTATGGCATTCTGTCTTTCTGTGACTCCTGATGAAATTAACGGTCATGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCTCAGACAGCGCCCCCTaGTGGAATCTAATAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GTTSSREPRKNRRCAKGFSDSAP*WNLIVL Trigger: CAGGACTATTAGATTCCAGCAGGGGGCGCTGTCTGA...GAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAACATGGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTGCCTTGGTAACAGGTaGAATGATAGACTCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: PLTWDHKFSRAKKEQKVCCLGNR*NDRLRL Trigger: CAGTCTGAGTCTATCATTCCACCTGTTACCAAGGCA...GCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| 3UTR CCA 72 bp | ACTAGAAGCTTCTGGCCTCTTTGTGTTCCTTTAACATaGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: TRSFWPLCVPLT*DHKFSRAKKEQ Trigger: CTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGGAACACAAAGAGGCCAGAAGCTTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| 3UTR GCA 72 bp | ACCGTTAATTTCATCAGGAGTCACAGAAAGACAGAATaGCATAAAAGTTCACACAGACGCCTGACAACTAAG | + |
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Preference number: 3 (lower is better) Translates to: TVNFIRSHRKTE*HKSSHRRLTTK Trigger: CTTAGTTGTCAGGCGTCTGTGTGAACTTTTATGGCATTCTGTCTTTCTGTGACTCCTGATGAAATTAACGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| 3UTR TCA 72 bp | TTGCATTTTACAGTTCATGACGAGCTTTTAATCTCATaGCCGTTAATTTCATCAGGAGTCACAGAAAGACAG | + |
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Preference number: 3 (lower is better) Translates to: LHFTVHDELLIS*PLISSGVTERQ Trigger: CTGTCTTTCTGTGACTCCTGATGAAATTAACGGTCATGAGATTAAAAGCTCGTCATGAACTGTAAAATGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCGCGCTCCAGCAGCCGTaGGCCCACCTCGCGGAACGG | + |
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Preference number: 4 (lower is better) Translates to: RPLLESNSPVDGPEVAASALQQP*AHLAER Trigger: CCGTTCCGCGAGGTGGGCGCACGGCTGCTGGAGCGC...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCAGCTGTACGCTCTCCTaGCGGTGCCCGCGACCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RPLLESNSPVDGPEVAASSCTLS*RCPRPQ Trigger: CTGCGGTCGCGGGCACCGCCAGGAGAGCGTACAGCT...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCTCCCCACTCCCAGGCTaGGCTAGCATCTGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RPLLESNSPVDGPEVAASSPLPG*ASIWRA Trigger: GGCTCTCCAGATGCTAGCGCAGCCTGGGAGTGGGGA...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCTTCCTGCCAGCCGCCTaGCCTTCCTGCAGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPLLESNSPVDGPEVAASFLPAA*PSCRCW Trigger: CCAGCATCTGCAGGAAGGCCAGGCGGCTGGCAGGAA...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCACTTCCGGCTCCGCCTaGCACAGCTCGGCCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: RPLLESNSPVDGPEVAASTSGSA*HSSACL Trigger: AAGACAGGCCGAGCTGTGCCAGGCGGAGCCGGAAGT...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCCCCGCCTCGTTGTTGTaGAGTTGCACCAATGCACGG | + |
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Preference number: 4 (lower is better) Translates to: RPLLESNSPVDGPEVAASPASLL*SCTNAR Trigger: CCGTGCATTGGTGCAACTGCACAACAACGAGGCGGG...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTACGCTCTCCTGGCGGTaGCCGCGACCGCAGCACAAC | + |
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Preference number: 4 (lower is better) Translates to: TPSSWLAPVISQGLDRYFTLSWR*PRPQHN Trigger: GTTGTGCTGCGGTCGCGGGCACCGCCAGGAGAGCGT...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGCGTCGTTGGTGCCCATaGCGCGCGAGGCGCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWRRWCP*RARRRG Trigger: TCCACGGCGCCTCGCGCGTCATGGGCACCAACGACG...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTTCCGCACCGCCAGCCTaGCCGCCTCGTTGTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TPSSWLAPVISQGLDRYFSAPPA*PPRCCA Trigger: TGCACAACAACGAGGCGGGCAGGCTGGCGGTGCGGA...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCATCTGGAGAGCCAGTTaGTCCTGGAGGTCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RPLLESNSPVDGPEVAASIWRAS*SWRSRS Trigger: ACTCCTGGACCTCCAGGACCAACTGGCTCTCCAGAT...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTTGGAACAGGCTTGAGTaGCCGCGTGGCTGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: TPSSWLAPVISQGLDRYFWNRLE*PRGWHQ Trigger: CTGGTGCCAGCCACGCGGTCACTCAAGCCTGTTCCA...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGCGCCCGCGGGGTGCCTaGCAACCACACTGTAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWRPRGA*QPHCRS Trigger: GCTCCTACAGTGTGGTTGTCAGGCACCCCGCGGGCG...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTTCGAACCCCCAGTCTTaGGCCTCGGGCAAGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TPSSWLAPVISQGLDRYFSNPQS*ASGKLC Trigger: GCAGAGCTTGCCCGAGGCGCAAGACTGGGGGTTCGA...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | ACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCAGGAGCACTCGGTGCGCGTGTaGCTCCGCACCGCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TSSREPRKNRRCAKGFQEHSVRV*LRTASL Trigger: CAGGCTGGCGGTGCGGAGTCACACGCGCACCGAGTG...CTCCTGGAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | CCTTTAACATGGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCCTGGAGGTCCAGGAGTaGCCAGAAGGCCGGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLTWDHKFSRAKKEQKVCLEVQE*PEGRRA Trigger: GGCCCTCCGGCCTTCTGGGCACTCCTGGACCTCCAG...GCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGCGGCAGCGGTGGCATTaGACCACGCAGCACCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWRQRWH*TTQHQW Trigger: CCACTGGTGCTGCGTGGTGCAATGCCACCGCTGCCG...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTAGGCCTTGCTGTGGCTaGAGCAGTTCCAGCGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: TPSSWLAPVISQGLDRYFRPCCG*SSSSVG Trigger: TCCGACGCTGGAACTGCTCCAGCCACAGCAAGGCCT...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAACATGGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCCGCACCCGGCAGCGGTaGCATTGCACCACGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PLTWDHKFSRAKKEQKVCRTRQR*HCTTQH Trigger: GTGCTGCGTGGTGCAATGCCACCGCTGCCGGGTGCG...GCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | CCTTTAACATGGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCCTCGGCCTGTCTTCCTaGCAGCCGCCTGGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PLTWDHKFSRAKKEQKVCLGLSS*QPPGLP Trigger: AGGAAGGCCAGGCGGCTGGCAGGAAGACAGGCCGAG...GCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTGAACCCGAAAGCCCATaGCACTTACACTCGGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: TPSSWLAPVISQGLDRYFEPESP*HLHSVR Trigger: GCGCACCGAGTGTAAGTGCCATGGGCTTTCGGGTTC...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | CCTTTAACATGGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCGGCGCAGAAGTCGGGTaGATCGGCTGCGTAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PLTWDHKFSRAKKEQKVCGAEVG*IGCVEE Trigger: CTCCTCTACGCAGCCGATTCACCCGACTTCTGCGCC...GCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTCGGCCCCGCTTGTGCTaGGCATCCATAAAGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TPSSWLAPVISQGLDRYFRPRLC*ASIKSL Trigger: AAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCG...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CCA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGAGAGCCAGTTGGTCCTaGAGGTCCAGGAGTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWRASWS*RSRSAQ Trigger: CTGGGCACTCCTGGACCTCCAGGACCAACTGGCTCT...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | ACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCAGGAGCCCATGGAACAGGCTTaGGTGACCGCGTGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: TSSREPRKNRRCAKGFQEPMEQA*VTAWLA Trigger: TGCCAGCCACGCGGTCACTCAAGCCTGTTCCATGGG...CTCCTGGAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCAGGAGAACGGAGGCAGCTTCTaGCAGCAGGTGCGCAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: TSSREPRKNRRCAKGFQENGGSF*QQVRRA Trigger: CGCTCTGCGCACCTGCTGGCAGAAGCTGCCTCCGTT...CTCCTGGAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGGTGGCTGGCACCAGCTaGGGTGATTGCAAACACGAA | + |
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Preference number: 4 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWVAGTS*GDCKHE Trigger: TTCGTGTTTGCAATCACCGCAGCTGGTGCCAGCCAC...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | CCTTTAACATGGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCCCACGGCCCCGCTTGTaGTGCGCATCCATAAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: PLTWDHKFSRAKKEQKVCPRPRL*CASIKS Trigger: ACTCTTTATGGATGCGCAGCACAAGCGGGGCCGTGG...GCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGAAACGGAACTGGAACTaGCATTCTCGAACCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWKRNWN*HSRTPS Trigger: ACTGGGGGTTCGAGAATGTCAGTTCCAGTTCCGTTT...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGACCAGCTGCGGTGATTaGAAACACGAAAGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWTSCGD*KHESCL Trigger: GAGACAGCTTTCGTGTTTGCAATCACCGCAGCTGGT...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR TCA 90 bp | ACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCAGGAGATCCATAAAGAGTCTTaGCTTCTCATCCCCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: TSSREPRKNRRCAKGFQEIHKES*LLIPEV Trigger: GACTTCGGGGATGAGAAGTCAAGACTCTTTATGGAT...CTCCTGGAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR GCA 90 bp | ACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCAGGAGTCGTTGTTGTGCAGTTaGACCAATGCACGGATATCT | + |
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Preference number: 4 (lower is better) Translates to: TSSREPRKNRRCAKGFQESLLCS*TNARIS Trigger: AGATATCCGTGCATTGGTGCAACTGCACAACAACGA...CTCCTGGAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | TCCATGACCAAGGGGCTGCCCACGGCCCACCACAGTCCATCGACGTaGGCGGGGCACAAGAGCAGCAGCAGCAGTCCGAGGCGGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SMTKGLPTAHHSPST*AGHKSSSSSPRREG Trigger: GCCCTCCCGCCTCGGACTGCTGCTGCTGCTCTTGTGCCCCGCGCACGTCGATGGACTGTGGTGGGCCGTGGGCAGCCCCTTGGTCATGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 90 bp | CGTGCCCGGCGAACCCGTGCGCCGGTTAGGGGCGCAGAAGTCGGGTaGATCGGCTGCGTAGAGGAGATCCGCTCGTCCGGGAGGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: RARRTRAPVRGAEVG*IGCVEEIRSSGRLE Trigger: CTCAAGCCTCCCGGACGAGCGGATCTCCTCTACGCAGCCGATTCACCCGACTTCTGCGCCCCTAACCGGCGCACGGGTTCGCCGGGCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 90 bp | CGGGTGAATCGGCTGCGTAGAGGAGATCCGCTCGTCCGGGAGGCTTaGGTGTGCGGACCGCAGGCAGCAGAGCTTTGCCGTCGTTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: RVNRLRRGDPLVREA*VCGPQAAELCRRWC Trigger: GCACCAACGACGGCAAAGCTCTGCTGCCTGCGGTCCGCACACTCAAGCCTCCCGGACGAGCGGATCTCCTCTACGCAGCCGATTCACCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | GAACTGACATTCTCGAACCCCCAGTCTTGCGCCTCGGGCAAGCTCTaGCACTACTTCCGGCTCCGCCTGGCACAGCTCGGCCTGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ELTFSNPQSCASGKL*HYFRLRLAQLGLSS Trigger: GGAAGACAGGCCGAGCTGTGCCAGGCGGAGCCGGAAGTAGTGGCAGAGCTTGCCCGAGGCGCAAGACTGGGGGTTCGAGAATGTCAGTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | CCGCACCGCCAGCCTGCCCGCCTCGTTGTTGTGCAGTTGCACCAATaGACGGATATCTCCACGGCCCCGCTTGTGCTGCGCATCCATAAA | + |
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Preference number: 5 (lower is better) Translates to: PHRQPARLVVVQLHQ*TDISTAPLVLRIHK Trigger: TTTATGGATGCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCACAACAACGAGGCGGGCAGGCTGGCGGTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | CGCCCCCTGCTGGAATCTAATAGTCCTGTAGATGGCCCAGAGGTGGCTGCCAGCTCCCATGGAACAGGCTaGAGTGACCGCGTGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RPLLESNSPVDGPEVAASSHGTG*SDRVAG Trigger: GCCAGCCACGCGGTCACTCAAGCCTGTTCCATGGGA...GCTGGCAGCCACCTCTGGGCCATCTACAGGACTATTAGATTCCAGCAGGGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | GGAACAGGCTTGAGTGACCGCGTGGCTGGCACCAGCTGCGGTGATTaGAAACACGAAAGCTGTCTCTCGGATGTCCTGCTGCAGGACGCG | + |
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Preference number: 5 (lower is better) Translates to: GTGLSDRVAGTSCGD*KHESCLSDVLLQDA Trigger: CGCGTCCTGCAGCAGGACATCCGAGAGACAGCTTTCGTGTTTGCAATCACCGCAGCTGGTGCCAGCCACGCGGTCACTCAAGCCTGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | GCTGCGGTGATTGCAAACACGAAAGCTGTCTCTCGGATGTCCTGCTaGAGGACGCGCCCAAAGGCCTTGCTGTGGCTGGAGCAGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: AAVIANTKAVSRMSC*RTRPKALLWLEQFQ Trigger: CTGGAACTGCTCCAGCCACAGCAAGGCCTTTGGGCGCGTCCTGCAGCAGGACATCCGAGAGACAGCTTTCGTGTTTGCAATCACCGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | CCAGCTGCGGTGATTGCAAACACGAAAGCTGTCTCTCGGATGTCCTaGTGCAGGACGCGCCCAAAGGCCTTGCTGTGGCTGGAGCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: PAAVIANTKAVSRMS*CRTRPKALLWLEQF Trigger: GAACTGCTCCAGCCACAGCAAGGCCTTTGGGCGCGTCCTGCAGCAGGACATCCGAGAGACAGCTTTCGTGTTTGCAATCACCGCAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | CTCTCCCATGGAACAGGCTTGAGTGACCGCGTGGCTGGCACCAGCTaGGGTGATTGCAAACACGAAAGCTGTCTCTCGGATGTCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSHGTGLSDRVAGTS*GDCKHESCLSDVLL Trigger: CAGCAGGACATCCGAGAGACAGCTTTCGTGTTTGCAATCACCGCAGCTGGTGCCAGCCACGCGGTCACTCAAGCCTGTTCCATGGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTAGAGCTTTGCCGTCGTaGGTGCCCATGACGCGCGAG | + |
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Preference number: 5 (lower is better) Translates to: TPSSWLAPVISQGLDRYFRALPS*VPMTRE Trigger: CTCGCGCGTCATGGGCACCAACGACGGCAAAGCTCT...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | GGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCCGGCAGCGGTGGCATaGCACCACGCAGCACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: GTTSSREPRKNRRCAKGFPAAVA*HHAAPV Trigger: CACTGGTGCTGCGTGGTGCAATGCCACCGCTGCCGG...GAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | ACCCCAAGTTCCTGGCTGGCCCCTGTAATTTCCCAAGGCCTGGATAGGTACTTTAGCCTGCCCGCCTCGTaGTTGTGCAGTTGCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: TPSSWLAPVISQGLDRYFSLPAS*LCSCTN Trigger: ATTGGTGCAACTGCACAACAACGAGGCGGGCAGGCT...AAAGTACCTATCCAGGCCTTGGGAAATTACAGGGGCCAGCCAGGAACTTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | ACCAACTTTCTTCCATATCCTGGCCCTCTAGGACTACCTCCTCTCAAACTGTGGGCAGGCAGCAGAGCTTaGCCGTCGTTGGTGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: TNFLPYPGPLGLPPLKLWAGSRA*PSLVPM Trigger: CATGGGCACCAACGACGGCAAAGCTCTGCTGCCTGC...CCACAGTTTGAGAGGAGGTAGTCCTAGAGGGCCAGGATATGGAAGAAAGTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | ACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCAGGAGCACAGGCTGAGTTCCTaGCGCACCCGGCAGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TSSREPRKNRRCAKGFQEHRLSS*RTRQRW Trigger: CCACCGCTGCCGGGTGCGCAAGGAACTCAGCCTGTG...CTCCTGGAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | TGCAGTTGCACCAATGCACGGATATCTCCACGGCCCCGCTTGTGCTaGGCATCCATAAAGAGTCTTGACTTCTCATCCCCGAAGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: CSCTNARISPRPRLC*ASIKSLDFSSPKST Trigger: TGTGGACTTCGGGGATGAGAAGTCAAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 90 bp | TTGTGCAGTTGCACCAATGCACGGATATCTCCACGGCCCCGCTTGTaGTGCGCATCCATAAAGAGTCTTGACTTCTCATCCCCGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LCSCTNARISPRPRL*CASIKSLDFSSPKS Trigger: GGACTTCGGGGATGAGAAGTCAAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | CCTTTAACATGGGACCACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCCTGCCCGCCTCGTTGTaGTGCAGTTGCACCAATGCA | + |
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Preference number: 5 (lower is better) Translates to: PLTWDHKFSRAKKEQKVCLPASL*CSCTNA Trigger: TGCATTGGTGCAACTGCACAACAACGAGGCGGGCAG...GCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGTGGTCCCATGTTAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS-3UTR CAA 90 bp | ACAAGTTCTCGAGAGCCAAGAAAGAACAGAAGGTGTGCTAAAGGTTTCCAGGAGCTCGTTGTTGTGCAGTaGCACCAATGCACGGATATC | + |
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Preference number: 5 (lower is better) Translates to: TSSREPRKNRRCAKGFQELVVVQ*HQCTDI Trigger: GATATCCGTGCATTGGTGCAACTGCACAACAACGAG...CTCCTGGAAACCTTTAGCACACCTTCTGTTCTTTCTTGGCTCTCGAGAACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 72 bp | AACAGGTCGCAGCCGCTGAGGTCCGGGGCACTGCTGTaGCAGGCGCGTCCGCGCGTGCCCGGCGAACCCGTG | + |
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Preference number: 6 (lower is better) Translates to: NRSQPLRSGALL*QARPRVPGEPV Trigger: CACGGGTTCGCCGGGCACGCGCGGACGCGCCTGCAACAGCAGTGCCCCGGACCTCAGCGGCTGCGACCTGTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 72 bp | CCGGAGGGCCTAGGCGGTGCCCGCCCGCGGGGTGCCTaGCAACCACACTGTAGGAGCTCTCCCATGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: PEGLGGARPRGA*QPHCRSSPMEQ Trigger: CTGTTCCATGGGAGAGCTCCTACAGTGTGGTTGTCAGGCACCCCGCGGGCGGGCACCGCCTAGGCCCTCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | AAGGGGCTGCCCACGGCCCACCACAGTCCATCGACGTaGGCGGGGCACAAGAGCAGCAGCAGCAGTCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: KGLPTAHHSPST*AGHKSSSSSPR Trigger: CCTCGGACTGCTGCTGCTGCTCTTGTGCCCCGCGCACGTCGATGGACTGTGGTGGGCCGTGGGCAGCCCCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CCA 72 bp | CCTCGGGCAAGCTCTGCCACTACTTCCGGCTCCGCCTaGCACAGCTCGGCCTGTCTTCCTGCCAGCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PRASSATTSGSA*HSSACLPASRL Trigger: CAGGCGGCTGGCAGGAAGACAGGCCGAGCTGTGCCAGGCGGAGCCGGAAGTAGTGGCAGAGCTTGCCCGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 72 bp | GGAGGCTTGAGTGTGCGGACCGCAGGCAGCAGAGCTTaGCCGTCGTTGGTGCCCATGACGCGCGAGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: GGLSVRTAGSRA*PSLVPMTREAP Trigger: CGGCGCCTCGCGCGTCATGGGCACCAACGACGGCAAAGCTCTGCTGCCTGCGGTCCGCACACTCAAGCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 72 bp | CGAACCCGTGCGCCGGTTAGGGGCGCAGAAGTCGGGTaGATCGGCTGCGTAGAGGAGATCCGCTCGTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RTRAPVRGAEVG*IGCVEEIRSSG Trigger: CCCGGACGAGCGGATCTCCTCTACGCAGCCGATTCACCCGACTTCTGCGCCCCTAACCGGCGCACGGGTTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | CGCAGGAACCCGAAAGCCCATGGCACTTACACTCGGTaGGCGTGTGACTCCGCACCGCCAGCCTGCCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: RRNPKAHGTYTR*ACDSAPPACPP Trigger: AGGCGGGCAGGCTGGCGGTGCGGAGTCACACGCGCACCGAGTGTAAGTGCCATGGGCTTTCGGGTTCCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 72 bp | CCCGAAAGCCCATGGCACTTACACTCGGTGCGCGTGTaGCTCCGCACCGCCAGCCTGCCCGCCTCGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PESPWHLHSVRV*LRTASLPASLL Trigger: CAACAACGAGGCGGGCAGGCTGGCGGTGCGGAGTCACACGCGCACCGAGTGTAAGTGCCATGGGCTTTCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 72 bp | CGGCTGCGTAGAGGAGATCCGCTCGTCCGGGAGGCTTaGGTGTGCGGACCGCAGGCAGCAGAGCTTTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: RLRRGDPLVREA*VCGPQAAELCR Trigger: ACGGCAAAGCTCTGCTGCCTGCGGTCCGCACACTCAAGCCTCCCGGACGAGCGGATCTCCTCTACGCAGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | TTCTCGAACCCCCAGTCTTGCGCCTCGGGCAAGCTCTaGCACTACTTCCGGCTCCGCCTGGCACAGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: FSNPQSCASGKL*HYFRLRLAQLG Trigger: GCCGAGCTGTGCCAGGCGGAGCCGGAAGTAGTGGCAGAGCTTGCCCGAGGCGCAAGACTGGGGGTTCGAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CCA 72 bp | CGGCACAGACAGTTCTCCTCGAGCTGTACGCTCTCCTaGCGGTGCCCGCGACCGCAGCACAACAGGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RHRQFSSSCTLS*RCPRPQHNRSQ Trigger: CTGCGACCTGTTGTGCTGCGGTCGCGGGCACCGCCAGGAGAGCGTACAGCTCGAGGAGAACTGTCTGTGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 90 bp | CGTGTGACTCCGCACCGCCAGCCTGCCCGCCTCGTTGTTGTGCAGTaGCACCAATGCACGGATATCTCCACGGCCCCGCTTGTGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RVTPHRQPARLVVVQ*HQCTDISTAPLVLR Trigger: GCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCACAACAACGAGGCGGGCAGGCTGGCGGTGCGGAGTCACACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | CGCACCGCCAGCCTGCCCGCCTCGTTGTTGTGCAGTTaGACCAATGCACGGATATCTCCACGGCCCCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RTASLPASLLCS*TNARISPRPRL Trigger: CAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCACAACAACGAGGCGGGCAGGCTGGCGGTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CCA 72 bp | CCACTCCCAGGCTGCGCTAGCATCTGGAGAGCCAGTTaGTCCTGGAGGTCCAGGAGTGCCCAGAAGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PLPGCASIWRAS*SWRSRSAQKAG Trigger: TCCGGCCTTCTGGGCACTCCTGGACCTCCAGGACCAACTGGCTCTCCAGATGCTAGCGCAGCCTGGGAGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 72 bp | CCGCACCGCCAGCCTGCCCGCCTCGTTGTTGTGCAGTaGCACCAATGCACGGATATCTCCACGGCCCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: PHRQPARLVVVQ*HQCTDISTAPL Trigger: AAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCACAACAACGAGGCGGGCAGGCTGGCGGTGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | CAGCCTGCCCGCCTCGTTGTTGTGCAGTTGCACCAATaGACGGATATCTCCACGGCCCCGCTTGTGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: QPARLVVVQLHQ*TDISTAPLVLR Trigger: GCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCACAACAACGAGGCGGGCAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 72 bp | TCTCGGATGTCCTGCTGCAGGACGCGCCCAAAGGCCTaGCTGTGGCTGGAGCAGTTCCAGCGTCGGAAACGG | + |
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Preference number: 6 (lower is better) Translates to: SRMSCCRTRPKA*LWLEQFQRRKR Trigger: CCGTTTCCGACGCTGGAACTGCTCCAGCCACAGCAAGGCCTTTGGGCGCGTCCTGCAGCAGGACATCCGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 90 bp | AGCGTCGGAAACGGAACTGGAACTGACATTCTCGAACCCCCAGTCTaGCGCCTCGGGCAAGCTCTGCCACTACTTCCGGCTCCGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SVGNGTGTDILEPPV*RLGQALPLLPAPPG Trigger: GCCAGGCGGAGCCGGAAGTAGTGGCAGAGCTTGCCCGAGGCGCAAGACTGGGGGTTCGAGAATGTCAGTTCCAGTTCCGTTTCCGACGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 72 bp | CAACCACACTGTAGGAGCTCTCCCATGGAACAGGCTTaGGTGACCGCGTGGCTGGCACCAGCTGCGGTGATT | + |
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Preference number: 6 (lower is better) Translates to: QPHCRSSPMEQA*VTAWLAPAAVI Trigger: AATCACCGCAGCTGGTGCCAGCCACGCGGTCACTCAAGCCTGTTCCATGGGAGAGCTCCTACAGTGTGGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | ATTGCAAACACGAAAGCTGTCTCTCGGATGTCCTGCTaGAGGACGCGCCCAAAGGCCTTGCTGTGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: IANTKAVSRMSC*RTRPKALLWLE Trigger: CTCCAGCCACAGCAAGGCCTTTGGGCGCGTCCTGCAGCAGGACATCCGAGAGACAGCTTTCGTGTTTGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | GTGATTGCAAACACGAAAGCTGTCTCTCGGATGTCCTaGTGCAGGACGCGCCCAAAGGCCTTGCTGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VIANTKAVSRMS*CRTRPKALLWL Trigger: CAGCCACAGCAAGGCCTTTGGGCGCGTCCTGCAGCAGGACATCCGAGAGACAGCTTTCGTGTTTGCAATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | TTGAGTGACCGCGTGGCTGGCACCAGCTGCGGTGATTaGAAACACGAAAGCTGTCTCTCGGATGTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSDRVAGTSCGD*KHESCLSDVLL Trigger: CAGCAGGACATCCGAGAGACAGCTTTCGTGTTTGCAATCACCGCAGCTGGTGCCAGCCACGCGGTCACTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | GGAACAGGCTTGAGTGACCGCGTGGCTGGCACCAGCTaGGGTGATTGCAAACACGAAAGCTGTCTCTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: GTGLSDRVAGTS*GDCKHESCLSD Trigger: ATCCGAGAGACAGCTTTCGTGTTTGCAATCACCGCAGCTGGTGCCAGCCACGCGGTCACTCAAGCCTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 72 bp | AACGGAACTGGAACTGACATTCTCGAACCCCCAGTCTaGCGCCTCGGGCAAGCTCTGCCACTACTTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: NGTGTDILEPPV*RLGQALPLLPA Trigger: AGCCGGAAGTAGTGGCAGAGCTTGCCCGAGGCGCAAGACTGGGGGTTCGAGAATGTCAGTTCCAGTTCCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS TCA 72 bp | ACGGCCCCGCTTGTGCTGCGCATCCATAAAGAGTCTTaGCTTCTCATCCCCGAAGTCCACATCGTCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TAPLVLRIHKES*LLIPEVHIVSA Trigger: TGCGGAGACGATGTGGACTTCGGGGATGAGAAGTCAAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | ACCAATGCACGGATATCTCCACGGCCCCGCTTGTGCTaGGCATCCATAAAGAGTCTTGACTTCTCATCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TNARISPRPRLC*ASIKSLDFSSP Trigger: CGGGGATGAGAAGTCAAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS GCA 72 bp | TGCACCAATGCACGGATATCTCCACGGCCCCGCTTGTaGTGCGCATCCATAAAGAGTCTTGACTTCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CTNARISPRPRL*CASIKSLDFSS Trigger: GGATGAGAAGTCAAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 90 bp | TTGTTGTGCAGTTGCACCAATGCACGGATATCTCCACGGCCCCGCTaGTGCTGCGCATCCATAAAGAGTCTTGACTTCTCATCCCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLCSCTNARISPRPR*CCASIKSLDFSSPK Trigger: CTTCGGGGATGAGAAGTCAAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACTGCACAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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| CDS CAA 72 bp | AGTTGCACCAATGCACGGATATCTCCACGGCCCCGCTaGTGCTGCGCATCCATAAAGAGTCTTGACTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCTNARISPRPR*CCASIKSLDFS Trigger: TGAGAAGTCAAGACTCTTTATGGATGCGCAGCACAAGCGGGGCCGTGGAGATATCCGTGCATTGGTGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006716.8 |
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