Pregenerated sensors for WNT5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030170Ensembl transcript IDs: ENSMUST00000117171.8, ENSMUST00000118120.8, ENSMUST00000119369.2, ENSMUST00000178696.8
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACCTAGGCTACCATCCCGGTTATCAGGTCTTTCCACAGGGCCTCTaGGTCTCCTGGCCAGGGTCACAGACACTCATCTTCCCCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: DLGYHPGYQVFPQGL*VSWPGSQTLIFPTG Trigger: TCCTGTGGGGAAGATGAGTGTCTGTGACCCTGGCCAGGAGACCCAGAGGCCCTGTGGAAAGACCTGATAACCGGGATGGTAGCCTAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGATCCCCACCTGTCTCCTaGAGGCTATGGCGCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: AVAGDRTVFLLAQELEAGSPPVS*RLWRTD Trigger: GTCTGTGCGCCATAGCCTCCAGGAGACAGGTGGGGA...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR CAA 90 bp | CCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTaGCTCCACGTCTTCCTGGCTGTAGCAGGTGACAGAACCGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PVLCNRHLVPSQIPG*LHVFLAVAGDRTVF Trigger: AAAGACGGTTCTGTCACCTGCTACAGCCAGGAAGACGTGGAGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAAGTCCTGGCCAGAAAATaGGGAAAAGCCCGTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PPVSWRLWRTDTLKPMSQVLARK*GKARFS Trigger: AGAGAAACGGGCTTTTCCCCATTTTCTGGCCAGGAC...TTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR CAA 90 bp | CTCCACGTCTTCCTGGCTGTAGCAGGTGACAGAACCGTCTTTCTCTaGGCACAAGAGCTTGAGGCAGGAGCTGGTGACATTCTCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: LHVFLAVAGDRTVFL*AQELEAGAGDILIR Trigger: TCTGATGAGAATGTCACCAGCTCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGCCAGGAAGACGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | TCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCACCGTTTCTCTCCCACTaGTTGTGGATTTCCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: SNPHLSPGGYGAQTLSSPPFLSH*LWISSK Trigger: TTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG...TGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGATTTCCACAGGGCCTCTaGGTCTCCTGGCCAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GRGLSCSVYSDEKRRKYRFPQGL*VSWPGS Trigger: TGACCCTGGCCAGGAGACCCAGAGGCCCTGTGGAAA...TCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTGCCCCTTCCCAAAGCTaGCTCCATTTTCAGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: DSCPVQQALGPQSNPRFAAPSQS*LHFQED Trigger: GTCTTCCTGAAAATGGAGCCAGCTTTGGGAAGGGGC...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGACCGTTTCTCTCCCACTaGTTGTGGATTTCCAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AVAGDRTVFLLAQELEAGPFLSH*LWISSK Trigger: TTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | TACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCTTCCCAAAGCTGGCTCCATGTCTCCTGGAGGCTATaGCGCACAGACACTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: YSDEKRRKYRAPSQSWLHVSWRL*RTDTLK Trigger: CTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGAC...ATGGAGCCAGCTTTGGGAAGGGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGTCTCCTGGAGGCTATaGCGCACAGACACTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GRGLSCSVYSDEKRRKYRVSWRL*RTDTLK Trigger: CTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGAC...TCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCCGTTTCTCTCCCACTaGTTGTGGATTTCCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPPFLSH*LWISSK Trigger: TTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CCA 90 bp | TACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCTTCCCAAAGCTGGCTCCATCCGTTTCTCTCCCACTaGTTGTGGATTTCCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: YSDEKRRKYRAPSQSWLHPFLSH*LWISSK Trigger: TTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG...ATGGAGCCAGCTTTGGGAAGGGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR TCA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTTCCACTTTCTTCTCTTaGTTATCTATCATCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: DSCPVQQALGPQSNPRFASTFFS*LSIIHP Trigger: TGGATGGATGATAGATAATCAAGAGAAGAAAGTGGA...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCATCCACTTTCTTCTCTTaGTTATCTATCATCCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: ISPVPSSNPHLSPGGYGASTFFS*LSIIHP Trigger: TGGATGGATGATAGATAATCAAGAGAAGAAAGTGGA...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR TCA 90 bp | CCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGTCCACTTTCTTCTCTTaGTTATCTATCATCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: PFLSHWLWISSKIQSSQRSTFFS*LSIIHP Trigger: TGGATGGATGATAGATAATCAAGAGAAGAAAGTGGA...CCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGTCCACTTTCTTCTCTTaGTTATCTATCATCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: AGDFPAVCTQMRKEGSTESTFFS*LSIIHP Trigger: TGGATGGATGATAGATAATCAAGAGAAGAAAGTGGA...CTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR CCA 72 bp | GGTTATCAGGTCTTTCCACAGGGCCTCTGGGTCTCCTaGCCAGGGTCACAGACACTCATCTTCCCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GYQVFPQGLWVS*PGSQTLIFPTG Trigger: TCCTGTGGGGAAGATGAGTGTCTGTGACCCTGGCCAGGAGACCCAGAGGCCCTGTGGAAAGACCTGATAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CAA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTTCTTGGCACAAGAGCTaGAGGCAGGAGCTGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: DSCPVQQALGPQSNPRFASWHKS*RQELVT Trigger: TGTCACCAGCTCCTGCCTCAAGCTCTTGTGCCAAGA...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTCCACGTCTTCCTGGCTGTAGAACCGTCTTTCTCTaGGCACAAGAGCTTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QALGPQSNPRFAPRLPGCRTVFL*AQELEA Trigger: TGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCT...ACAGCCAGGAAGACGTGGAGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTAGAACCGTCTTTCTCTaGGCACAAGAGCTTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGRTVFL*AQELEA Trigger: TGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCT...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR TCA 72 bp | CATGCCCTGTCATTCTCAAAGCCTCCCTTGACAGAGTaGCAGCAGATTCCTGTCCTGTGCAACAGGCACTTG | + |
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Preference number: 3 (lower is better) Translates to: HALSFSKPPLTE*QQIPVLCNRHL Trigger: CAAGTGCCTGTTGCACAGGACAGGAATCTGCTGTCACTCTGTCAAGGGAGGCTTTGAGAATGACAGGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR TCA 72 bp | CCTGCTAGCATGCCCTGTCATTCTCAAAGCCTCCCTTaGCAGAGTGACAGCAGATTCCTGTCCTGTGCAACA | + |
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Preference number: 3 (lower is better) Translates to: PASMPCHSQSLP*QSDSRFLSCAT Trigger: TGTTGCACAGGACAGGAATCTGCTGTCACTCTGTCAAGGGAGGCTTTGAGAATGACAGGGCATGCTAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTCCACGTCTTCCTGGCTGTCTCCACTTTCTTCTCTaGATTATCTATCATCCATCC | + |
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Preference number: 3 (lower is better) Translates to: QALGPQSNPRFAPRLPGCLHFLL*IIYHPS Trigger: GGATGGATGATAGATAATCAAGAGAAGAAAGTGGAG...ACAGCCAGGAAGACGTGGAGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAAAACTCCACTTTCTTCTCTaGATTATCTATCATCCATCC | + |
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Preference number: 3 (lower is better) Translates to: TCLLEAMAHRHSQAHVPKLHFLL*IIYHPS Trigger: GGATGGATGATAGATAATCAAGAGAAGAAAGTGGAG...TTTTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CAA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGCTCCACTTTCTTCTCTaGATTATCTATCATCCATCC | + |
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Preference number: 3 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGLHFLL*IIYHPS Trigger: GGATGGATGATAGATAATCAAGAGAAGAAAGTGGAG...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGACACTCATCTTCCCCACAGGACTGTAGATGTGGAATAAGTCCAGTTCCTCTCCACTTTCTTCTCTaGATTATCTATCATCCATCC | + |
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Preference number: 3 (lower is better) Translates to: HRHSSSPQDCRCGISPVPLHFLL*IIYHPS Trigger: GGATGGATGATAGATAATCAAGAGAAGAAAGTGGAG...AGGAACTGGACTTATTCCACATCTACAGTCCTGTGGGGAAGATGAGTGTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | CCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAAAACGGTCCCCCACCTTaGGGAACTCGGCCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PPVSWRLWRTDTLKPMSQNGPPP*GTRPAG Trigger: TCCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTT...TTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | CCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAACGGAACTCGGCCAGCTaGAGCCAGCAGGTCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PPVSWRLWRTDTLKPMSQRNSAS*SQQVLR Trigger: CCTCAAGACCTGCTGGCTCCAGCTGGCCGAGTTCCG...TTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTCTGGGGTGGGCTGGTTaGAGCGGCTGTTGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGLGWAG*SGCWPA Trigger: AGCTGGCCAACAGCCGCTTCAACCAGCCCACCCCAG...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | TCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCAAACGGTCCCCCACCTTaGGGAACTCGGCCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SNPHLSPGGYGAQTLSSPNGPPP*GTRPAG Trigger: TCCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTT...TGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCAGAGGCGACCCTaGGTGCCCAGGGAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGLQRRP*VPREPV Trigger: CACAGGCTCCCTGGGCACCCAGGGTCGCCTCTGCAA...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | CCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAAGACCCGGAGACTCCGTaGCATTTGCAGGCGACATCA | + |
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Preference number: 4 (lower is better) Translates to: PPVSWRLWRTDTLKPMSQDPETP*HLQATS Trigger: TGATGTCGCCTGCAAATGTCACGGAGTCTCCGGGTC...TTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | GACCTAGGCTACCATCCCGGTTATCAGGTCTTTCCACAGGGCCTCTGGGTCTCCTGGCAGCGTTCCACCTaGACGCTCTTGAAGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DLGYHPGYQVFPQGLWVSWQRST*TLLKRS Trigger: TGACCGCTTCAAGAGCGTTCAGGTGGAACGCTGCCA...GGAGACCCAGAGGCCCTGTGGAAAGACCTGATAACCGGGATGGTAGCCTAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GACCTAGGCTACCATCCCGGTTATCAGGTCTTTCCACAGGGCCTCTGGGTCTCCTGTTGTCCACGGTGCTaGAGTTCCAGCGCCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: DLGYHPGYQVFPQGLWVSCCPRC*SSSASV Trigger: GACAGAGGCGCTGGAACTGCAGCACCGTGGACAACA...GGAGACCCAGAGGCCCTGTGGAAAGACCTGATAACCGGGATGGTAGCCTAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGAGCCTCGCAGCACGGCTaGAGCCACAGGTGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: AVAGDRTVFLLAQELEAGASQHG*SHRWTA Trigger: AGCTGTCCACCTGTGGCTGCAGCCGTGCTGCGAGGC...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTGCCTCGCAGCACGGCTaGAGCCACAGGTGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: DSCPVQQALGPQSNPRFAASQHG*SHRWTA Trigger: AGCTGTCCACCTGTGGCTGCAGCCGTGCTGCGAGGC...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCACTGGGGTGGGCTGGTTaGAGCGGCTGTTGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ISPVPSSNPHLSPGGYGALGWAG*SGCWPA Trigger: AGCTGGCCAACAGCCGCTTCAACCAGCCCACCCCAG...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGGCCTCGCAGCACGGCTaGAGCCACAGGTGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGASQHG*SHRWTA Trigger: AGCTGTCCACCTGTGGCTGCAGCCGTGCTGCGAGGC...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTATGAGAGCTCGGCCCTaGTCCTCCGATCCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGMRARP*SSDPLA Trigger: TGCCAAGGGATCGGAGGAGCAGGGCCGAGCTCTCAT...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTGCAGCTGTGCCCAGCTaGAGAGCAGAGCTGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: DSCPVQQALGPQSNPRFAAAVPS*RAELPR Trigger: TCGTGGCAGCTCTGCTCTCCAGCTGGGCACAGCTGC...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGCCCAGGGAGCCTGTaGTCTCATTACGCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNPHLSPGGYGAQTLSSPCPGSL*SHYAGS Trigger: ACTGCCTGCGTAATGAGACCACAGGCTCCCTGGGCA...TGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCATTGCAGAGGCGACCCTaGGTGCCCAGGGAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPVPSSNPHLSPGGYGALQRRP*VPREPV Trigger: CACAGGCTCCCTGGGCACCCAGGGTCGCCTCTGCAA...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTGACCCGGAGACTCCGTaGCATTTGCAGGCGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGDPETP*HLQATS Trigger: TGATGTCGCCTGCAAATGTCACGGAGTCTCCGGGTC...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCAGCTGGAGAGCAGAGCTaGCACGACCACCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISPVPSSNPHLSPGGYGAAGEQS*HDHQQQ Trigger: CTGCTGCTGGTGGTCGTGGCAGCTCTGCTCTCCAGC...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCGCCTCGCAGCACGGCTaGAGCCACAGGTGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPASQHG*SHRWTA Trigger: AGCTGTCCACCTGTGGCTGCAGCCGTGCTGCGAGGC...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGAATGAGAGCTCGGCCCTaGTCCTCCGATCCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVAGDRTVFLLAQELEAGMRARP*SSDPLA Trigger: TGCCAAGGGATCGGAGGAGCAGGGCCGAGCTCTCAT...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | CCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGAACGGTCCCCCACCTTaGGGAACTCGGCCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFLSHWLWISSKIQSSQRNGPPP*GTRPAG Trigger: TCCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTT...CCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR GCA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTCCTCTGAGGTCTTGTTaGAGAGGCGACCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSCPVQQALGPQSNPRFAPLRSC*RGDPGC Trigger: GCACCCAGGGTCGCCTCTGCAACAAGACCTCAGAGG...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | CCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGCAGCTGTGCCCAGCTaGAGAGCAGAGCTGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: PFLSHWLWISSKIQSSQRAAVPS*RAELPR Trigger: TCGTGGCAGCTCTGCTCTCCAGCTGGGCACAGCTGC...CCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTCCACGTCTTCCTGGCTGTCAGCTTTCTCTGGCCTaGGGAAAGCCCAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QALGPQSNPRFAPRLPGCQLSLA*GKPRKL Trigger: CAACTTCCTGGGCTTTCCCCAGGCCAGAGAAAGCTG...ACAGCCAGGAAGACGTGGAGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCTTGCAGAGGCGACCCTaGGTGCCCAGGGAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPLQRRP*VPREPV Trigger: CACAGGCTCCCTGGGCACCCAGGGTCGCCTCTGCAA...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTTGGCTGCACACGGGCTaGGCGCCAATGATGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: DSCPVQQALGPQSNPRFAWLHTG*APMMNI Trigger: GATGTTCATCATTGGCGCTCAGCCCGTGTGCAGCCA...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGAGACCCGGAGACTCCGTaGCATTTGCAGGCGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: AVAGDRTVFLLAQELEAGDPETP*HLQATS Trigger: TGATGTCGCCTGCAAATGTCACGGAGTCTCCGGGTC...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | GCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCTGGGGTGGGCTGGTTaGAGCGGCTGTTGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGDFPAVCTQMRKEGSTELGWAG*SGCWPA Trigger: AGCTGGCCAACAGCCGCTTCAACCAGCCCACCCCAG...CTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCGCTGGAGAGCAGAGCTaGCACGACCACCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPAGEQS*HDHQQQ Trigger: CTGCTGCTGGTGGTCGTGGCAGCTCTGCTCTCCAGC...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACGCTGGAGAGCAGAGCTaGCACGACCACCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KARFSPTGCGFPAKSSPHAGEQS*HDHQQQ Trigger: CTGCTGCTGGTGGTCGTGGCAGCTCTGCTCTCCAGC...GTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GACCTAGGCTACCATCCCGGTTATCAGGTCTTTCCACAGGGCCTCTGGGTCTCCAACATCTCCGGTCTCTaGACTGGGTTCAGAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLGYHPGYQVFPQGLWVSNISGL*TGFRAS Trigger: ACTAGCTCTGAACCCAGTGCAGAGACCGGAGATGTT...GGAGACCCAGAGGCCCTGTGGAAAGACCTGATAACCGGGATGGTAGCCTAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTTGTTGTCCACGGTGCTaGAGTTCCAGCGCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSCPVQQALGPQSNPRFACCPRC*SSSASV Trigger: GACAGAGGCGCTGGAACTGCAGCACCGTGGACAACA...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTTTCTTCTCTATGAGAGCTCGGCCCTaGTCCTCCGATCCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPHRGPASPKLFLSTFFSMRARP*SSDPLA Trigger: TGCCAAGGGATCGGAGGAGCAGGGCCGAGCTCTCAT...AGAGAAGAAAGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCACCTCTGAGGTCTTGTTaGAGAGGCGACCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISPVPSSNPHLSPGGYGAPLRSC*RGDPGC Trigger: GCACCCAGGGTCGCCTCTGCAACAAGACCTCAGAGG...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCGCAGCTGTGCCCAGCTaGAGAGCAGAGCTGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPAAVPS*RAELPR Trigger: TCGTGGCAGCTCTGCTCTCCAGCTGGGCACAGCTGC...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | TCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCAGCTCCTCCGATCCCTTaGCAAAGTTCTTCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNPHLSPGGYGAQTLSSPAPPIP*QSSSHA Trigger: AGCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGC...TGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCGGAACTCGGCCAGCTaGAGCCAGCAGGTCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPRNSAS*SQQVLR Trigger: CCTCAAGACCTGCTGGCTCCAGCTGGCCGAGTTCCG...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGAGGCAGTAGTCAGGACTaGGGTCCACGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVAGDRTVFLLAQELEAGGSSQD*GPRRPG Trigger: ACCTGGTCTACGTGGACCCCAGTCCTGACTACTGCC...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGATGCCCAGGGAGCCTGTaGTCTCATTACGCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVAGDRTVFLLAQELEAGCPGSL*SHYAGS Trigger: ACTGCCTGCGTAATGAGACCACAGGCTCCCTGGGCA...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CCA 90 bp | TACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCTTCCCAAAGCTGGCTCCATTTGCAGAGGCGACCCTaGGTGCCCAGGGAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSDEKRRKYRAPSQSWLHLQRRP*VPREPV Trigger: CACAGGCTCCCTGGGCACCCAGGGTCGCCTCTGCAA...ATGGAGCCAGCTTTGGGAAGGGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| 3UTR CAA 72 bp | TGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTaGCTCCACGTCTTCCTGGCTGTAGCAGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CNRHLVPSQIPG*LHVFLAVAGDR Trigger: TCTGTCACCTGCTACAGCCAGGAAGACGTGGAGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | AGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTTTCTTCTCTTGGCAGCGTTCCACCTaGACGCTCTTGAAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPHRGPASPKLFLSTFFSWQRST*TLLKRS Trigger: TGACCGCTTCAAGAGCGTTCAGGTGGAACGCTGCCA...AGAGAAGAAAGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR TCA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGTGGCAGCGTTCCACCTaGACGCTCTTGAAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGWQRST*TLLKRS Trigger: TGACCGCTTCAAGAGCGTTCAGGTGGAACGCTGCCA...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTTTCTTCTCTTGTTGTCCACGGTGCTaGAGTTCCAGCGCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPHRGPASPKLFLSTFFSCCPRC*SSSASV Trigger: GACAGAGGCGCTGGAACTGCAGCACCGTGGACAACA...AGAGAAGAAAGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR GCA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCATGAGAGCTCGGCCCTaGTCCTCCGATCCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPMRARP*SSDPLA Trigger: TGCCAAGGGATCGGAGGAGCAGGGCCGAGCTCTCAT...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR GCA 90 bp | TACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCTTCCCAAAGCTGGCTCCATAACGGTCCCCCACCTTaGGGAACTCGGCCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSDEKRRKYRAPSQSWLHNGPPP*GTRPAG Trigger: TCCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTT...ATGGAGCCAGCTTTGGGAAGGGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAAAAGCTCCTCCGATCCCTTaGCAAAGTTCTTCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCLLEAMAHRHSQAHVPKAPPIP*QSSSHA Trigger: AGCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGC...TTTTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACACTCATCTTCCCCACAGGACTGTAGATGTGGAATAAGTCCAGTTCCTCGGAACTCGGCCAGCTaGAGCCAGCAGGTCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRHSSSPQDCRCGISPVPRNSAS*SQQVLR Trigger: CCTCAAGACCTGCTGGCTCCAGCTGGCCGAGTTCCG...AGGAACTGGACTTATTCCACATCTACAGTCCTGTGGGGAAGATGAGTGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTTTCTTCTCTGGCAGTAGTCAGGACTaGGGTCCACGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPHRGPASPKLFLSTFFSGSSQD*GPRRPG Trigger: ACCTGGTCTACGTGGACCCCAGTCCTGACTACTGCC...AGAGAAGAAAGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCATGCCCAGGGAGCCTGTaGTCTCATTACGCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPVPSSNPHLSPGGYGACPGSL*SHYAGS Trigger: ACTGCCTGCGTAATGAGACCACAGGCTCCCTGGGCA...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACTGGCAGCGTTCCACCTaGACGCTCTTGAAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KARFSPTGCGFPAKSSPHWQRST*TLLKRS Trigger: TGACCGCTTCAAGAGCGTTCAGGTGGAACGCTGCCA...GTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAAAAAACATCTCCGGTCTCTaGACTGGGTTCAGAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TCLLEAMAHRHSQAHVPKNISGL*TGFRAS Trigger: ACTAGCTCTGAACCCAGTGCAGAGACCGGAGATGTT...TTTTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCTCTGAGGTCTTGTTaGAGAGGCGACCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGDFPAVCTQMRKEGSTEPLRSC*RGDPGC Trigger: GCACCCAGGGTCGCCTCTGCAACAAGACCTCAGAGG...CTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTTTCTTCTCTCAGCTTTCTCTGGCCTaGGGAAAGCCCAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPHRGPASPKLFLSTFFSQLSLA*GKPRKL Trigger: CAACTTCCTGGGCTTTCCCCAGGCCAGAGAAAGCTG...AGAGAAGAAAGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACGGCAGTAGTCAGGACTaGGGTCCACGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KARFSPTGCGFPAKSSPHGSSQD*GPRRPG Trigger: ACCTGGTCTACGTGGACCCCAGTCCTGACTACTGCC...GTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| 3UTR CAA 72 bp | CAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTaGAGGCAGGAGCTGGTGACATTCTCATCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTEPSFSWHKS*RQELVTFSSEG Trigger: GCCTTCTGATGAGAATGTCACCAGCTCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| 3UTR CAA 72 bp | TTCCTGGCTGTAGCAGGTGACAGAACCGTCTTTCTCTaGGCACAAGAGCTTGAGGCAGGAGCTGGTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: FLAVAGDRTVFL*AQELEAGAGDI Trigger: AATGTCACCAGCTCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGCCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR TCA 90 bp | TACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCTTCCCAAAGCTGGCTCCATTGGCTGCACACGGGCTaGGCGCCAATGATGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: YSDEKRRKYRAPSQSWLHWLHTG*APMMNI Trigger: GATGTTCATCATTGGCGCTCAGCCCGTGTGCAGCCA...ATGGAGCCAGCTTTGGGAAGGGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGTGTTGTCCACGGTGCTaGAGTTCCAGCGCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGDFPAVCTQMRKEGSTECCPRC*SSSASV Trigger: GACAGAGGCGCTGGAACTGCAGCACCGTGGACAACA...CTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACACTCATCTTCCCCACAGGACTGTAGATGTGGAATAAGTCCAGTTCCTGGCAGTAGTCAGGACTaGGGTCCACGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRHSSSPQDCRCGISPVPGSSQD*GPRRPG Trigger: ACCTGGTCTACGTGGACCCCAGTCCTGACTACTGCC...AGGAACTGGACTTATTCCACATCTACAGTCCTGTGGGGAAGATGAGTGTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACACTCATCTTCCCCACAGGACTGTAGATGTGGAATAAGTCCAGTTCCTGCTCCTCCGATCCCTTaGCAAAGTTCTTCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRHSSSPQDCRCGISPVPAPPIP*QSSSHA Trigger: AGCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGC...AGGAACTGGACTTATTCCACATCTACAGTCCTGTGGGGAAGATGAGTGTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GACCTAGGCTACCATCCCGGTTATCAGGTCTTTCCACAGGGCCTCTGGGTCTCCTTGGCCAGCTCCAGCTaGCCCTGGCGGGTGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DLGYHPGYQVFPQGLWVSLASSS*PWRVMR Trigger: GCGCATCACCCGCCAGGGCAAGCTGGAGCTGGCCAA...GGAGACCCAGAGGCCCTGTGGAAAGACCTGATAACCGGGATGGTAGCCTAGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATCTGGGGTGGGCTGGTaGAAGCGGCTGTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNPHLSPGGYGAQTLSSPSGVGW*KRLLAS Trigger: GCTGGCCAACAGCCGCTTCAACCAGCCCACCCCAGA...TGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTAAACGGTCCCCCACCTaGCGGAACTCGGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGKRSPT*RNSASW Trigger: CCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTTT...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTCTGGGGTGGGCTGGTaGAAGCGGCTGTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGSGVGW*KRLLAS Trigger: GCTGGCCAACAGCCGCTTCAACCAGCCCACCCCAGA...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCATTGGCCAGCTCCAGCTaGCCCTGGCGGGTGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ISPVPSSNPHLSPGGYGALASSS*PWRVMR Trigger: GCGCATCACCCGCCAGGGCAAGCTGGAGCTGGCCAA...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCTCCTGGAGGCTATGGCGCACAGACACTCTCAAGCCCATGTCCCAAAACCCTCTGAGGTCTTGTaGCAGAGGCGACCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCLLEAMAHRHSQAHVPKPSEVL*QRRPWV Trigger: CACCCAGGGTCGCCTCTGCAACAAGACCTCAGAGGG...TTTTGGGACATGGGCTTGAGAGTGTCTGTGCGCCATAGCCTCCAGGAGACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS TCA 90 bp | TTTCTCTGGCCTGGGGAAAGCCCAGGAAGTTGGCTGCACACGGGCTaGGCGCCAATGATGAACATCTCCGGTCTCTGCACTGGGTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLWPGESPGSWLHTG*APMMNISGLCTGFR Trigger: TCTGAACCCAGTGCAGAGACCGGAGATGTTCATCATTGGCGCTCAGCCCGTGTGCAGCCAACTTCCTGGGCTTTCCCCAGGCCAGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGAGGAAAGCCCAGGAAGTaGGCTGCACACGGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVAGDRTVFLLAQELEAGGKPRK*AAHGLS Trigger: GCTCAGCCCGTGTGCAGCCAACTTCCTGGGCTTTCC...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGAAACGGTCCCCCACCTaGCGGAACTCGGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGKRSPT*RNSASW Trigger: CCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTTT...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACTTGGCCAGCTCCAGCTaGCCCTGGCGGGTGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KARFSPTGCGFPAKSSPHLASSS*PWRVMR Trigger: GCGCATCACCCGCCAGGGCAAGCTGGAGCTGGCCAA...GTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGTCTGGGGTGGGCTGGTaGAAGCGGCTGTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGSGVGW*KRLLAS Trigger: GCTGGCCAACAGCCGCTTCAACCAGCCCACCCCAGA...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTTTCTTCTCTTCTGGGGTGGGCTGGTaGAAGCGGCTGTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPHRGPASPKLFLSTFFSSGVGW*KRLLAS Trigger: GCTGGCCAACAGCCGCTTCAACCAGCCCACCCCAGA...AGAGAAGAAAGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGGGAAAGCCCAGGAAGTaGGCTGCACACGGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGGKPRK*AAHGLS Trigger: GCTCAGCCCGTGTGCAGCCAACTTCCTGGGCTTTCC...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | CAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTCCACGTCTTCCTGGCTGTTGCTCCTCCGATCCCTaGGCAAAGTTCTTCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QALGPQSNPRFAPRLPGCCSSDP*AKFFSR Trigger: GCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGCA...ACAGCCAGGAAGACGTGGAGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAAACGGTCCCCCACCTaGCGGAACTCGGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KARFSPTGCGFPAKSSPHKRSPT*RNSASW Trigger: CCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTTT...GTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGGGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | GGCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGATTGGCCAGCTCCAGCTaGCCCTGGCGGGTGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGLSCSVYSDEKRRKYRLASSS*PWRVMR Trigger: GCGCATCACCCGCCAGGGCAAGCTGGAGCTGGCCAA...TCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGCAGGTGACAGAACCGTCTTTCTCTTGGCACAAGAGCTTGAGGCAGGAATGCCCTCTGAGGTCTaGTTGCAGAGGCGACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVAGDRTVFLLAQELEAGMPSEV*LQRRPW Trigger: CCAGGGTCGCCTCTGCAACAAGACCTCAGAGGGCAT...TCCTGCCTCAAGCTCTTGTGCCAAGAGAAAGACGGTTCTGTCACCTGCTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | GATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTTGCTAGTGACCACCAGGAGTaGGCGTCAGTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSCPVQQALGPQSNPRFASDHQE*ASVSSC Trigger: ACAGCTGCTGACTGACGCCAACTCCTGGTGGTCACT...AGCAAACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGATTCCTGTCCTGTGCAACAGGCACTTGGTCCCCAGTCAAATCCCAGGTTGCTCCTCCGATCCCTaGGCAAAGTTCTTCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QQIPVLCNRHLVPSQIPGCSSDP*AKFFSR Trigger: GCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGCA...ACCTGGGATTTGACTGGGGACCAAGTGCCTGTTGCACAGGACAGGAATCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | GGCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAAAACGGTCCCCCACCTaGCGGAACTCGGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGLSCSVYSDEKRRKYRKRSPT*RNSASW Trigger: CCAGCTGGCCGAGTTCCGCAAGGTGGGGGACCGTTT...TCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCCCTCTGAGGTCTTGTaGCAGAGGCGACCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GDFPAVCTQMRKEGSTEPPSEVL*QRRPWV Trigger: CACCCAGGGTCGCCTCTGCAACAAGACCTCAGAGGG...GGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGATGCCCTCTGAGGTCTaGTTGCAGAGGCGACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGMPSEV*LQRRPW Trigger: CCAGGGTCGCCTCTGCAACAAGACCTCAGAGGGCAT...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGTCCAGTTCCTTCATCTAATCCCCACCTGTCTCCTGGAGGCTATGGCGCAATGCCCTCTGAGGTCTaGTTGCAGAGGCGACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ISPVPSSNPHLSPGGYGAMPSEV*LQRRPW Trigger: CCAGGGTCGCCTCTGCAACAAGACCTCAGAGGGCAT...TGCGCCATAGCCTCCAGGAGACAGGTGGGGATTAGATGAAGGAACTGGACTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGATGCCCTCTGAGGTCTaGTTGCAGAGGCGACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFLSHWLWISSKIQSSQRMPSEV*LQRRPW Trigger: CCAGGGTCGCCTCTGCAACAAGACCTCAGAGGGCAT...CCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTTTCTTCTCTAGTGACCACCAGGAGTaGGCGTCAGTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPHRGPASPKLFLSTFFSSDHQE*ASVSSC Trigger: ACAGCTGCTGACTGACGCCAACTCCTGGTGGTCACT...AGAGAAGAAAGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCTCTGAGGTCTTGTaGCAGAGGCGACCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGDFPAVCTQMRKEGSTEPSEVL*QRRPWV Trigger: CACCCAGGGTCGCCTCTGCAACAAGACCTCAGAGGG...CTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CACAGACACTCATCTTCCCCACAGGACTGTAGATGTGGAATAAGTCCAGTTCCTCCCTCTGAGGTCTTGTaGCAGAGGCGACCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRHSSSPQDCRCGISPVPPSEVL*QRRPWV Trigger: CACCCAGGGTCGCCTCTGCAACAAGACCTCAGAGGG...AGGAACTGGACTTATTCCACATCTACAGTCCTGTGGGGAAGATGAGTGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGTGACCACCAGGAGTaGGCGTCAGTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KARFSPTGCGFPAKSSPHSDHQE*ASVSSC Trigger: ACAGCTGCTGACTGACGCCAACTCCTGGTGGTCACT...GTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACAGAGGGTGCTCCTCCGATCCCTaGGCAAAGTTCTTCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSPTGCGFPAKSSPHRGCSSDP*AKFFSR Trigger: GCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGCA...CCCTCTGTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GACCTAGGCTACCATCCCGGTTATCAGGTCTTTCCACAGGGCCTCTGGGTCTCCACCTCGGTGCATTTTTaGCATCTGACAAAGCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: DLGYHPGYQVFPQGLWVSTSVHF*HLTKQH Trigger: GTGTTGCTTTGTCAGATGCAAAAAATGCACCGAGGT...GGAGACCCAGAGGCCCTGTGGAAAGACCTGATAACCGGGATGGTAGCCTAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGACTTTCCTGCAGTGTGTACTCAGATGAGAAAAGAAGGAAGTACAGAGTGCTCCTCCGATCCCTaGGCAAAGTTCTTCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: AGDFPAVCTQMRKEGSTECSSDP*AKFFSR Trigger: GCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGCA...CTCTGTACTTCCTTCTTTTCTCATCTGAGTACACACTGCAGGAAAGTCCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAATCCAGTCCTCACAGAGGGCCAGCATCTCCTAAGCTCTTCCTCTCCACTACCTCGGTGCATTTTTaGCATCTGACAAAGCAACAC | + |
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Preference number: 5 (lower is better) Translates to: AKSSPHRGPASPKLFLSTTSVHF*HLTKQH Trigger: GTGTTGCTTTGTCAGATGCAAAAAATGCACCGAGGT...AGTGGAGAGGAAGAGCTTAGGAGATGCTGGCCCTCTGTGAGGACTGGATTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCGTTTCTCTCCCACTGGTTGTGGATTTCCAGCAAAATCCAGTCCTCACACCTCGGTGCATTTTTaGCATCTGACAAAGCAACAC | + |
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Preference number: 5 (lower is better) Translates to: KARFSPTGCGFPAKSSPHTSVHF*HLTKQH Trigger: GTGTTGCTTTGTCAGATGCAAAAAATGCACCGAGGT...GTGAGGACTGGATTTTGCTGGAAATCCACAACCAGTGGGAGAGAAACGGGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS-3UTR CAA 90 bp | TACTCAGATGAGAAAAGAAGGAAGTACAGAGCCCCTTCCCAAAGCTGGCTCCATACCTCGGTGCATTTTTaGCATCTGACAAAGCAACAC | + |
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Preference number: 5 (lower is better) Translates to: YSDEKRRKYRAPSQSWLHTSVHF*HLTKQH Trigger: GTGTTGCTTTGTCAGATGCAAAAAATGCACCGAGGT...ATGGAGCCAGCTTTGGGAAGGGGCTCTGTACTTCCTTCTTTTCTCATCTGAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS TCA 72 bp | CCTGGGGAAAGCCCAGGAAGTTGGCTGCACACGGGCTaGGCGCCAATGATGAACATCTCCGGTCTCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: PGESPGSWLHTG*APMMNISGLCT Trigger: AGTGCAGAGACCGGAGATGTTCATCATTGGCGCTCAGCCCGTGTGCAGCCAACTTCCTGGGCTTTCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS TCA 72 bp | TCCAGCGCCTCTGTCGAAACTGGTGTTGGCACTCTCTaGTGCCCGTCTTGGCTCCCTCCCCGATGTAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SSASVETGVGTL*CPSWLPPRCRT Trigger: TGTCCTACATCGGGGAGGGAGCCAAGACGGGCATCAGAGAGTGCCAACACCAGTTTCGACAGAGGCGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS CCA 72 bp | TCTGCACTGGGTTCAGAGCTAGTGACCACCAGGAGTTaGCGTCAGTCAGCAGCTGTGCCCAGCTGGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SALGSELVTTRS*RQSAAVPSWRA Trigger: TGCTCTCCAGCTGGGCACAGCTGCTGACTGACGCCAACTCCTGGTGGTCACTAGCTCTGAACCCAGTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS CAA 72 bp | AGGTTCATGAGAGCTCGGCCCTGCTCCTCCGATCCCTaGGCAAAGTTCTTCTCACGCTCTCGGGCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: RFMRARPCSSDP*AKFFSRSRAST Trigger: TGTGGATGCCCGAGAGCGTGAGAAGAACTTTGCCAAGGGATCGGAGGAGCAGGGCCGAGCTCTCATGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS TCA 72 bp | CAGCAGGTCTTGAGGCTGCAGGACCCGGAGACTCCGTaGCATTTGCAGGCGACATCAGCCATCTTATACACG | + |
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Preference number: 6 (lower is better) Translates to: QQVLRLQDPETP*HLQATSAILYT Trigger: CGTGTATAAGATGGCTGATGTCGCCTGCAAATGTCACGGAGTCTCCGGGTCCTGCAGCCTCAAGACCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS CAA 72 bp | ACACAGCTTTCTCTGGCCTGGGGAAAGCCCAGGAAGTaGGCTGCACACGGGCTGAGCGCCAATGATGAACAT | + |
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Preference number: 6 (lower is better) Translates to: TQLSLAWGKPRK*AAHGLSANDEH Trigger: ATGTTCATCATTGGCGCTCAGCCCGTGTGCAGCCAACTTCCTGGGCTTTCCCCAGGCCAGAGAAAGCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117171.8 ENSMUST00000118120.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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| CDS CAA 90 bp | ATACAACTGACACAGCTTTCTCTGGCCTGGGGAAAGCCCAGGAAGTaGGCTGCACACGGGCTGAGCGCCAATGATGAACATCTCCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IQLTQLSLAWGKPRK*AAHGLSANDEHLRS Trigger: AGACCGGAGATGTTCATCATTGGCGCTCAGCCCGTGTGCAGCCAACTTCCTGGGCTTTCCCCAGGCCAGAGAAAGCTGTGTCAGTTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117171.8 ENSMUST00000119369.2 ENSMUST00000178696.8 |
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