Pregenerated sensors for WNT5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021994Ensembl transcript IDs: ENSMUST00000063465.12, ENSMUST00000112272.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTTCTGGGAGCCTCTCGAAGTCCAGGGCTGCGACAAACCACAGTaGCCTCCCCACAAAGAACACCAAAGAGAGGGTGGAGAACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GFWEPLEVQGCDKPQ*PPHKEHQREGGELA Trigger: GGCCAGTTCTCCACCCTCTCTTTGGTGTTCTTTGTGGGGAGGGCACTGTGGTTTGTCGCAGCCCTGGACTTCGAGAGGCTCCCAGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR GCA 90 bp | GAGGCTGGTGATCCTGGGTTCTGGGAGCCTCTCGAAGTCCAGGGCTaGGACAAACCACAGTGCCCTCCCCACAAAGAACACCAAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: EAGDPGFWEPLEVQG*DKPQCPPHKEHQRE Trigger: CTCTCTTTGGTGTTCTTTGTGGGGAGGGCACTGTGGTTTGTCGCAGCCCTGGACTTCGAGAGGCTCCCAGAACCCAGGATCACCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CCA 90 bp | GCCCTACCAGCAGTGAGTGTCCACCAGGGCTGCCATTCGGAAGCATaGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: ALPAVSVHQGCHSEA*PAESPERAWDHAGR Trigger: TCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCTGGTGGACACTCACTGCTGGTAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR GCA 90 bp | TCGTGTACATTTTCTGCCCTACCAGCAGTGAGTGTCCACCAGGGCTaGCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGG | + |
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Preference number: 1 (lower is better) Translates to: SCTFSALPAVSVHQG*HSEAWPAESPERAW Trigger: CCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCTGGTGGACACTCACTGCTGGTAGGGCAGAAAATGTACACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CCA 90 bp | GGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATaGGATCATGCAGGAAGATGGCTGCCATCATCTCCTCACAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: GCHSEAWPAESPERA*DHAGRWLPSSPHRG Trigger: ACCTCTGTGAGGAGATGATGGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR GCA 90 bp | TTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATaGAGGAAGATGGCTGCCATCATCTCCTCACAGAGGTGTTCGCAG | + |
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Preference number: 1 (lower is better) Translates to: FGSMASRESRKGMGS*RKMAAIISSQRCSQ Trigger: CTGCGAACACCTCTGTGAGGAGATGATGGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CCA 90 bp | TGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATaGCTGCCATCATCTCCTCACAGAGGTGTTCGCAGTGCTCAACTA | + |
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Preference number: 1 (lower is better) Translates to: WPAESPERAWDHAGR*LPSSPHRGVRSAQL Trigger: TAGTTGAGCACTGCGAACACCTCTGTGAGGAGATGATGGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CCA 90 bp | CAGGAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTaGGCCAAGAGATATCATCAAAACACATCAAGTTACCGTACCTCC | + |
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Preference number: 1 (lower is better) Translates to: QEDNNQTAATPLWTP*AKRYHQNTSSYRTS Trigger: GGAGGTACGGTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CCA 90 bp | TTAGTTCCTGTTCTCTGCAGACCCTTGCTTTCTTCCCATAAAGACTaGGACACAGAGATGTCCCACAAGACCCCTCTTCAGTCAAACCGA | + |
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Preference number: 1 (lower is better) Translates to: LVPVLCRPLLSSHKD*DTEMSHKTPLQSNR Trigger: TCGGTTTGACTGAAGAGGGGTCTTGTGGGACATCTCTGTGTCCCAGTCTTTATGGGAAGAAAGCAAGGGTCTGCAGAGAACAGGAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR CCA 90 bp | ACCAGAGCACCTGCAATTCATTTTGGTCACAGGAACTGTTATTCATaGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: TRAPAIHFGHRNCYS*VCTSSFTWIPPISK Trigger: CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACAGTTCCTGTGACCAAAATGAATTGCAGGTGCTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CCA 90 bp | GCTTGCCACCGCCTGTATATAAATGCTTCATTGATGTTCCTGTACTaGGAAGGTCTTGAATGCTCTCCAGGATGGGAAGGGAAAAGATGC | + |
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Preference number: 1 (lower is better) Translates to: ACHRLYINASLMFLY*EGLECSPGWEGKRC Trigger: GCATCTTTTCCCTTCCCATCCTGGAGAGCATTCAAGACCTTCCCAGTACAGGAACATCAATGAAGCATTTATATACAGGCGGTGGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR CCA 90 bp | GGTCACAGGAACTGTTATTCATGGGTCTGTACCTCCTCCTTCACCTaGATACCACCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: GHRNCYSWVCTSSFT*IPPISKDSLFEKKM Trigger: CATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACAGTTCCTGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR GCA 90 bp | CATGCGTGTGTGCATTCAACATGTACCAGAAGTTACAAGCAACCTTaGCATCCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: HACVHSTCTRSYKQP*HPRSLPIFQTKQLL Trigger: CAAGAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTAACTTCTGGTACATGTTGAATGCACACACGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR CCA 90 bp | GCAAAGGACCAGATAATGTATCAGTCTACAGTCCTGGCCAGATTCTaGTCTACATTTCCAGAAAGCAGGAGGCCTTCTATTAATTGCACA | + |
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Preference number: 1 (lower is better) Translates to: AKDQIMYQSTVLARF*STFPESRRPSINCT Trigger: TGTGCAATTAATAGAAGGCCTCCTGCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGACTGTAGACTGATACATTATCTGGTCCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR GCA 90 bp | TCTATTAATTGCACATCACACAGGGATTCTTTAGTTCCTGTTCTCTaGAGACCCTTGCTTTCTTCCCATAAAGACTGGGACACAGAGATG | + |
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Preference number: 1 (lower is better) Translates to: SINCTSHRDSLVPVL*RPLLSSHKDWDTEM Trigger: CATCTCTGTGTCCCAGTCTTTATGGGAAGAAAGCAAGGGTCTGCAGAGAACAGGAACTAAAGAATCCCTGTGTGATGTGCAATTAATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR CCA 90 bp | CCTTATTTTAAAACATTGTTTAAACTAGCTATCTATGTGGTGAGCTaGTTTGCTTCGGGAACTCAGATCCGTCCTGTCAGACAGGACAGT | + |
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Preference number: 1 (lower is better) Translates to: PYFKTLFKLAIYVVS*FASGTQIRPVRQDS Trigger: ACTGTCCTGTCTGACAGGACGGATCTGAGTTCCCGAAGCAAACCAGCTCACCACATAGATAGCTAGTTTAAACAATGTTTTAAAATAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR GCA 90 bp | AAATGCAACTGTTCAAGTACACTAGGAACAGTTTTAGGGTACACCTaGAGGGTAATAGGAAAAGCACAAATGGAAAGTCTAAACGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: KCNCSSTLGTVLGYT*RVIGKAQMESLNAG Trigger: TCCTGCGTTTAGACTTTCCATTTGTGCTTTTCCTATTACCCTGCAGGTGTACCCTAAAACTGTTCCTAGTGTACTTGAACAGTTGCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CCA 90 bp | TTGTTTGAATTTGCCCAGAAAAGCTATTTTAAACACTCTATATGTTaGTCTACTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LFEFAQKSYFKHSIC*STVVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACTACAGTAGACCAACATATAGAGTGTTTAAAATAGCTTTTCTGGGCAAATTCAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR TCA 90 bp | CCGAGTATATGTTTTAGCAATAAAGAATACTGGTCAATATACAACTaGAGAAAAACGGAAACAGATGTGCGTCCTAGAGCCACAAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: PSICFSNKEYWSIYN*RKTETDVRPRATSC Trigger: ACAACTTGTGGCTCTAGGACGCACATCTGTTTCCGTTTTTCTTCAGTTGTATATTGACCAGTATTCTTTATTGCTAAAACATATACTCGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR TCA 90 bp | AGGTGGGACACAGTAACATACATGATATGCCTGCTTCTGAAGATATaGGATTCTTGCTTGTACCTTCTAAAAGATCATTCTAGAAATACA | + |
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Preference number: 1 (lower is better) Translates to: RWDTVTYMICLLLKI*DSCLYLLKDHSRNT Trigger: TGTATTTCTAGAATGATCTTTTAGAAGGTACAAGCAAGAATCTCATATCTTCAGAAGCAGGCATATCATGTATGTTACTGTGTCCCACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGATATCATCAAGTGGGTCCTGGGAGTaGGACTGGGTGAAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QPNSCNTSVDSLGQEISSSGSWE*DWVKGR Trigger: CCTGCCCTTCACCCAGTCCCACTCCCAGGACCCACT...TGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGCTCCTGGGTGAGAGGGTGAGCCTTTTTGATTCATCTCTGGGATGTTACTCCTGGGAGTGGGACTaGGTGAAGGGCAGGCACACC | + |
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Preference number: 2 (lower is better) Translates to: KLLLGERVSLFDSSLGCYSWEWD*VKGRHT Trigger: GGTGTGCCTGCCCTTCACCCAGTCCCACTCCCAGGA...GTAACATCCCAGAGATGAATCAAAAAGGCTCACCCTCTCACCCAGGAGCAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCAAGTTTTCTAATTTCTaGGGACCTCCCTCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIKFSNF*GPPSPS Trigger: GCTGGGGGAGGGAGGTCCCCAGAAATTAGAAAACTT...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGAGTGGGTCCTGGGAGTaGGACTGGGTGAAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CYSWVCTSSFTWIPPISKSGSWE*DWVKGR Trigger: CCTGCCCTTCACCCAGTCCCACTCCCAGGACCCACT...CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CAA 90 bp | TCTCCTCACAGAGGTGTTCGCAGTGCTCAACTACATGGGACTTTCTaGTTGCCTGTGGGGGTGAGGGGTTGCAAATGGGATTCATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: SPHRGVRSAQLHGTF*LPVGVRGCKWDSWV Trigger: TACCCATGAATCCCATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCACTGCGAACACCTCTGTGAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGCAACTGTTCAAGTACACTAGGAACAGTTTTAGGGTACACCTGCAGGGTACTGCCCTACCAGCAGTaGGTGTCCACCAGGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: KCNCSSTLGTVLGYTCRVLPYQQ*VSTRAA Trigger: GGCAGCCCTGGTGGACACTCACTGCTGGTAGGGCAG...TACCCTGCAGGTGTACCCTAAAACTGTTCCTAGTGTACTTGAACAGTTGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATCCTGGGAGTGGGACTaGGTGAAGGGCAGGCACACC | + |
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Preference number: 2 (lower is better) Translates to: PISKDSLFEKKMAPTPSRSWEWD*VKGRHT Trigger: GGTGTGCCTGCCCTTCACCCAGTCCCACTCCCAGGA...TCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCAGGAGGCCTTCTATTAATTGCCACAGGACTGAGGTaGCCAGAAGGCTACCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SWPDSGLHFQKAGGLLLIATGLR*PEGYQA Trigger: GGCTTGGTAGCCTTCTGGTCACCTCAGTCCTGTGGC...AATTAATAGAAGGCCTCCTGCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAACTACATGGGACTTTCTTGTTGCCTGTGGGGGTGAGGGGTTGCAAATGAAGTTTTCTAATTTCTaGGGACCTCCCTCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSTTWDFLVACGGEGLQMKFSNF*GPPSPS Trigger: GCTGGGGGAGGGAGGTCCCCAGAAATTAGAAAACTT...CATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGAAGAACAACCCCTAAGTaGCTGGTTCTGAACATGGCT | + |
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Preference number: 2 (lower is better) Translates to: EDNNQTAATPLWTPWAKRRTTPK*LVLNMA Trigger: AGCCATGTTCAGAACCAGCCACTTAGGGGTTGTTCT...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAGCAACCTTGCCATCCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCGGTGATCCTGGGTTCTaGGAGCCTCTCGAAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: YKQPCHPRSLPIFQTKQLGDPGF*EPLEVQ Trigger: CTGGACTTCGAGAGGCTCCCAGAACCCAGGATCACC...GAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCACAAAACAAAACACATaGTTCCAGCTGCAATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RAAIRKHGQQRVQKGHGITKQNT*FQLQFL Trigger: CAAGAATTGCAGCTGGAACCATGTGTTTTGTTTTGT...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGTGGAGTATCTGTAGGTaGGACACAGTAACATACATG | + |
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Preference number: 2 (lower is better) Translates to: GSMASRESRKGMGSCRKMWSICR*DTVTYM Trigger: CATGTATGTTACTGTGTCCCACCTACAGATACTCCA...CATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCGTGAGGGGTTGCAAATaGGATTCATGGGTAATTTTT | + |
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Preference number: 2 (lower is better) Translates to: MASRESRKGMGSCRKMAAVRGCK*DSWVIF Trigger: AAAAATTACCCATGAATCCCATTTGCAACCCCTCAC...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAGCAACCTTGCCATCCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCACACCAAAGAGAGGGTaGAGAACTGGCCATGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: YKQPCHPRSLPIFQTKQLTPKRG*RTGHGQ Trigger: CTGCCCATGGCCAGTTCTCCACCCTCTCTTTGGTGT...GAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTGGGCCAAGAGATATCATCAAAACACATCAAGTTACCGTACCTCCAAAGCTAAGTGGCTGGTTCTaGACATGGCTCCTCGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LPGPRDIIKTHQVTVPPKLSGWF*TWLLVY Trigger: GTACACGAGGAGCCATGTTCAGAACCAGCCACTTAG...CTTTGGAGGTACGGTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCACCTGCAATTCATTTTaGTCACAGGAACTGTTATTC | + |
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Preference number: 2 (lower is better) Translates to: MASRESRKGMGSCRKMAATCNSF*SQELLF Trigger: GAATAACAGTTCCTGTGACCAAAATGAATTGCAGGT...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR CAA 90 bp | TGCACATCACACAGGGATTCTTTAGTTCCTGTTCTCTGCAGACCCTaGCTTTCTTCCCATAAAGACTGGGACACAGAGATGTCCCACAAG | + |
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Preference number: 2 (lower is better) Translates to: CTSHRDSLVPVLCRP*LSSHKDWDTEMSHK Trigger: CTTGTGGGACATCTCTGTGTCCCAGTCTTTATGGGAAGAAAGCAAGGGTCTGCAGAGAACAGGAACTAAAGAATCCCTGTGTGATGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR-3UTR TCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGACTGCTTCTGAAGATATaGGATTCTTGCTTGTACCTT | + |
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Preference number: 2 (lower is better) Translates to: EDNNQTAATPLWTPWAKRLLLKI*DSCLYL Trigger: AAGGTACAAGCAAGAATCTCATATCTTCAGAAGCAG...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGCAACTGTTCAAGTACACTAGGAACAGTTTTAGGGTACACCTGCAGGGTATGTTGCCTGTGGGGGTaGGGGGTTGCAAATGGGATT | + |
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Preference number: 2 (lower is better) Translates to: KCNCSSTLGTVLGYTCRVCCLWG*GVANGI Trigger: AATCCCATTTGCAACCCCTCACCCCCACAGGCAACA...TACCCTGCAGGTGTACCCTAAAACTGTTCCTAGTGTACTTGAACAGTTGCATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR GCA 90 bp | GATTTAGAGCTTGCCTCCATGCGTGTGTGCATTCAACATGTACCAGAAGTTACATGCGACAAACCACAGTaGCCTCCCCACAAAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: DLELASMRVCIQHVPEVTCDKPQ*PPHKEH Trigger: GTGTTCTTTGTGGGGAGGGCACTGTGGTTTGTCGCA...TGTAACTTCTGGTACATGTTGAATGCACACACGCATGGAGGCAAGCTCTAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGTGTTTGAGAAGAAAATaGCTCCTACACCTTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: GSMASRESRKGMGSCRKMCLRRK*LLHLLD Trigger: ATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACA...CATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGTATTAAGAATCAGCTaGGCTAACACAAGATTATGG | + |
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Preference number: 2 (lower is better) Translates to: GSMASRESRKGMGSCRKMVLRIS*ANTRLW Trigger: CCATAATCTTGTGTTAGCCCAGCTGATTCTTAATAC...CATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAACTACATGGGACTTTCTTGTTGCCTGTGGGGGTGAGGGGTTGCAAATGCTGCTTCTGAAGATATaGGATTCTTGCTTGTACCTT | + |
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Preference number: 2 (lower is better) Translates to: CSTTWDFLVACGGEGLQMLLLKI*DSCLYL Trigger: AAGGTACAAGCAAGAATCTCATATCTTCAGAAGCAG...CATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGCTTTCTATAAATAAGTaGGTCCTGGGAGTGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: CYSWVCTSSFTWIPPISKLSINK*VLGVGL Trigger: CAGTCCCACTCCCAGGACCCACTTATTTATAGAAAG...CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGAACCTGCAATTCATTTTaGTCACAGGAACTGTTATTC | + |
|
Preference number: 2 (lower is better) Translates to: EDNNQTAATPLWTPWAKRTCNSF*SQELLF Trigger: GAATAACAGTTCCTGTGACCAAAATGAATTGCAGGT...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGCAACCTTGCCATCCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCTTAGTTCCTGTTCTCTaGAGACCCTTGCTTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YKQPCHPRSLPIFQTKQLLVPVL*RPLLSS Trigger: GGAAGAAAGCAAGGGTCTGCAGAGAACAGGAACTAA...GAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGCAACCTTGCCATCCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCTTTTGGATGTGGTTCTaGTTGCCACCGCCTGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: YKQPCHPRSLPIFQTKQLFWMWF*LPPPVY Trigger: ATATACAGGCGGTGGCAAGCAGAACCACATCCAAAA...GAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CCA 90 bp | CAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGATATCATCAGTATTAAGAATCAGCTaGGCTAACACAAGATTATGG | + |
|
Preference number: 2 (lower is better) Translates to: QPNSCNTSVDSLGQEISSVLRIS*ANTRLW Trigger: CCATAATCTTGTGTTAGCCCAGCTGATTCTTAATAC...TGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTTAGAGCTTGCCTCCATGCGTGTGTGCATTCAACATGTACCAGAAGTTACATCTTCCCATAAAGACTaGGACACAGAGATGTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: DLELASMRVCIQHVPEVTSSHKD*DTEMSH Trigger: GTGGGACATCTCTGTGTCCCAGTCTTTATGGGAAGA...TGTAACTTCTGGTACATGTTGAATGCACACACGCATGGAGGCAAGCTCTAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR TCA 90 bp | TACAAGCAACCTTGCCATCCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCAGCAGATGTCACTTTTaGAACAGAGGTGCCCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: YKQPCHPRSLPIFQTKQLSRCHF*NRGALI Trigger: AATAAGGGCACCTCTGTTTCAAAAGTGACATCTGCT...GAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CCA 90 bp | TGTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGTCCAGCTGCAATTCTTaGGGGAGAAATAAAAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CYSWVCTSSFTWIPPISKSSCNS*GRNKKN Trigger: GTTCTTTTTATTTCTCCCCCAAGAATTGCAGCTGGA...CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTGGGCCAAGAGATATCATCAAAACACATCAAGTTACCGTACCTCCAAAGTGGAGTATCTGTAGGTaGGACACAGTAACATACATG | + |
|
Preference number: 2 (lower is better) Translates to: LPGPRDIIKTHQVTVPPKWSICR*DTVTYM Trigger: CATGTATGTTACTGTGTCCCACCTACAGATACTCCA...CTTTGGAGGTACGGTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATACTGGTCAATATACAACTGAAGAAAAACGGAAACAGATGTGCGTCCTAGTGGAGAACTGGCCATaGGCAGGAAGCAGAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KNTGQYTTEEKRKQMCVLVENWP*AGSRKA Trigger: AGCCTTTCTGCTTCCTGCCCATGGCCAGTTCTCCAC...TAGGACGCACATCTGTTTCCGTTTTTCTTCAGTTGTATATTGACCAGTATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR TCA 90 bp | TGTACCAGAGCACCTGCAATTCATTTTGGTCACAGGAACTGTTATTCATGGGTCAAAGGACTCTCTGTTTaGGAAGAAAATGGCTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: CTRAPAIHFGHRNCYSWVKGLSV*EENGSY Trigger: GTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTT...GACCCATGAATAACAGTTCCTGTGACCAAAATGAATTGCAGGTGCTCTGGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGGCTTGAATACCGTTGCAGAAAAAGACACATGGGAACTGGCTATTGGGAAAGAGGGTGAGCCTTTTTaGTTCATCTCTGGGATGTTA | + |
|
Preference number: 2 (lower is better) Translates to: IGLNTVAEKDTWELAIGKEGEPF*FISGML Trigger: TAACATCCCAGAGATGAATCAAAAAGGCTCACCCTC...TTTCCCAATAGCCAGTTCCCATGTGTCTTTTTCTGCAACGGTATTCAAGCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR GCA 90 bp | ATTGGCTTGAATACCGTTGCAGAAAAAGACACATGGGAACTGGCTATTGGGAAAGGATGTGGTTCTGCTTaGCACCGCCTGTATATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: IGLNTVAEKDTWELAIGKGCGSA*HRLYIN Trigger: ATTTATATACAGGCGGTGGCAAGCAGAACCACATCC...TTTCCCAATAGCCAGTTCCCATGTGTCTTTTTCTGCAACGGTATTCAAGCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTGGGCCAAGAGATATCATCAAAACACATCAAGTTACCGTACCTCCAAAGTCCAGCTGCAATTCTTaGGGGAGAAATAAAAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LPGPRDIIKTHQVTVPPKSSCNS*GRNKKN Trigger: GTTCTTTTTATTTCTCCCCCAAGAATTGCAGCTGGA...CTTTGGAGGTACGGTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTGGCTTGAATACCGTTGCAGAAAAAGACACATGGGAACTGGCTATTGGGAAACAGTGCTCAACTACATaGGACTTTCTTGTTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IGLNTVAEKDTWELAIGKQCSTT*DFLVAC Trigger: ACAGGCAACAAGAAAGTCCCATGTAGTTGAGCACTG...TTTCCCAATAGCCAGTTCCCATGTGTCTTTTTCTGCAACGGTATTCAAGCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR TCA 90 bp | AAATGCAACTGTTCAAGTACACTAGGAACAGTTTTAGGGTACACCTGCAGGGTAAAAGGACTCTCTGTTTaGGAAGAAAATGGCTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: KCNCSSTLGTVLGYTCRVKGLSV*EENGSY Trigger: GTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTT...TACCCTGCAGGTGTACCCTAAAACTGTTCCTAGTGTACTTGAACAGTTGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCAACTGTTCAAGTACACTAGGAACAGTTTTAGGGTACACCTGCAGGGTAGTGAGGGGTTGCAAATaGGATTCATGGGTAATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: KCNCSSTLGTVLGYTCRVVRGCK*DSWVIF Trigger: AAAAATTACCCATGAATCCCATTTGCAACCCCTCAC...TACCCTGCAGGTGTACCCTAAAACTGTTCCTAGTGTACTTGAACAGTTGCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTTAGAGCTTGCCTCCATGCGTGTGTGCATTCAACATGTACCAGAAGTTACAAAACACTCTATATGTTaGTCTACTGTAGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: DLELASMRVCIQHVPEVTKHSIC*STVVCV Trigger: CACACACACTACAGTAGACCAACATATAGAGTGTTT...TGTAACTTCTGGTACATGTTGAATGCACACACGCATGGAGGCAAGCTCTAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CCA 90 bp | ATAATGTATCAGTCTACAGTCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCACAAAACAAAACACATaGTTCCAGCTGCAATTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IMYQSTVLARFWSTFPESTKQNT*FQLQFL Trigger: CAAGAATTGCAGCTGGAACCATGTGTTTTGTTTTGT...GCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGACTGTAGACTGATACATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATACTGGTCAATATACAACTGAAGAAAAACGGAAACAGATGTGCGTCCTAGAGCCACAAGTTGTTTaGATTTGCCCAGAAAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: KNTGQYTTEEKRKQMCVLEPQVV*ICPEKL Trigger: TAGCTTTTCTGGGCAAATTCAAACAACTTGTGGCTC...TAGGACGCACATCTGTTTCCGTTTTTCTTCAGTTGTATATTGACCAGTATTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR GCA 90 bp | AAGAATACTGGTCAATATACAACTGAAGAAAAACGGAAACAGATGTGCGTCCTAGTTTTAGGGTACACCTaGAGGGTAATAGGAAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KNTGQYTTEEKRKQMCVLVLGYT*RVIGKA Trigger: TGCTTTTCCTATTACCCTGCAGGTGTACCCTAAAAC...TAGGACGCACATCTGTTTCCGTTTTTCTTCAGTTGTATATTGACCAGTATTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR CCA 72 bp | GGGACAGTGTGGGCAGGCAGTGGTCGTCCTGGGAAGTaGCAGCCCCAAAGGTCAGGAGCACAAAGAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTVWAGSGRPGK*QPQRSGAQRNR Trigger: CCTGTTTCTTTGTGCTCCTGACCTTTGGGGCTGCCACTTCCCAGGACGACCACTGCCTGCCCACACTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR GCA 72 bp | GATCCTGGGTTCTGGGAGCCTCTCGAAGTCCAGGGCTaGGACAAACCACAGTGCCCTCCCCACAAAGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: DPGFWEPLEVQG*DKPQCPPHKEH Trigger: GTGTTCTTTGTGGGGAGGGCACTGTGGTTTGTCGCAGCCCTGGACTTCGAGAGGCTCCCAGAACCCAGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCTGTGGGGGTGAGGGGTaGCAAATGGGATTCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RAAIRKHGQQRVQKGHGICGGEG*QMGFMG Trigger: ACCCATGAATCCCATTTGCAACCCCTCACCCCCACA...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CCA 72 bp | GCAGTGAGTGTCCACCAGGGCTGCCATTCGGAAGCATaGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: AVSVHQGCHSEA*PAESPERAWDH Trigger: ATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCTGGTGGACACTCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR TCA 72 bp | ATGGCTCCTCGTGTACATTTTCTGCCCTACCAGCAGTaGGTGTCCACCAGGGCTGCCATTCGGAAGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: MAPRVHFLPYQQ*VSTRAAIRKHG Trigger: GCCATGCTTCCGAATGGCAGCCCTGGTGGACACTCACTGCTGGTAGGGCAGAAAATGTACACGAGGAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR GCA 72 bp | TTTTCTGCCCTACCAGCAGTGAGTGTCCACCAGGGCTaGCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FSALPAVSVHQG*HSEAWPAESPE Trigger: TTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCTGGTGGACACTCACTGCTGGTAGGGCAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CCA 72 bp | TCCGTCCTGTCAGACAGGACAGTCCCAAGTCCTCCCTaGGAAAGGAGTGAAGCAAACAGACAGGAGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVLSDRTVPSPP*ERSEANRQEAG Trigger: ACCAGCCTCCTGTCTGTTTGCTTCACTCCTTTCCCAGGGAGGACTTGGGACTGTCCTGTCTGACAGGACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CCA 72 bp | TCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATaGGATCATGCAGGAAGATGGCTGCCATCATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SEAWPAESPERA*DHAGRWLPSSP Trigger: AGGAGATGATGGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGATGTGGGGGTGAGGGGTaGCAAATGGGATTCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EDNNQTAATPLWTPWAKRCGGEG*QMGFMG Trigger: ACCCATGAATCCCATTTGCAACCCCTCACCCCCACA...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CCA 72 bp | GTTCTCTGCAGACCCTTGCTTTCTTCCCATAAAGACTaGGACACAGAGATGTCCCACAAGACCCCTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLCRPLLSSHKD*DTEMSHKTPLQ Trigger: CTGAAGAGGGGTCTTGTGGGACATCTCTGTGTCCCAGTCTTTATGGGAAGAAAGCAAGGGTCTGCAGAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR TCA 72 bp | TTGTTGGGCAATAAGTTAAGAGCCACAGGACTGAGGTaGCCAGAAGGCTACCAAGCCCATGAATGGATACAC | + |
|
Preference number: 3 (lower is better) Translates to: LLGNKLRATGLR*PEGYQAHEWIH Trigger: GTGTATCCATTCATGGGCTTGGTAGCCTTCTGGTCACCTCAGTCCTGTGGCTCTTAACTTATTGCCCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CCA 72 bp | CCTGCAATTCATTTTGGTCACAGGAACTGTTATTCATaGGTCTGTACCTCCTCCTTCACCTGGATACCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PAIHFGHRNCYS*VCTSSFTWIPP Trigger: GGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACAGTTCCTGTGACCAAAATGAATTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CCA 72 bp | CAGGAGGATAACAACCAAACAGCTGCAACACCTCTGTaGACTCCCTGGGCCAAGAGATATCATCAAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: QEDNNQTAATPL*TPWAKRYHQNT Trigger: TGTGTTTTGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGATATCATCACAAAGGACTCTCTGTTaGAGAAGAAAATGGCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QPNSCNTSVDSLGQEISSQRTLC*RRKWLL Trigger: TAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG...TGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGCTCCTGGGTGAGAGGGTGAGCCTTTTTGATTCATCTCTGGGATGTTACCAAAGGACTCTCTGTTaGAGAAGAAAATGGCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KLLLGERVSLFDSSLGCYQRTLC*RRKWLL Trigger: TAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG...GTAACATCCCAGAGATGAATCAAAAAGGCTCACCCTCTCACCCAGGAGCAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR GCA 72 bp | TGCACATCACACAGGGATTCTTTAGTTCCTGTTCTCTaGAGACCCTTGCTTTCTTCCCATAAAGACTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: CTSHRDSLVPVL*RPLLSSHKDWD Trigger: GTCCCAGTCTTTATGGGAAGAAAGCAAGGGTCTGCAGAGAACAGGAACTAAAGAATCCCTGTGTGATGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR GCA 72 bp | GAGCCCGACACTGACCATTTTGGATGTGGTTCTGCTTaGCACCGCCTGTATATAAATGCTTCATTGATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: EPDTDHFGCGSA*HRLYINASLMF Trigger: GAACATCAATGAAGCATTTATATACAGGCGGTGGCAAGCAGAACCACATCCAAAATGGTCAGTGTCGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR CCA 72 bp | CACCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATaGCTCCTACACCTTCTAGATGTGAACCCCCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: HPSQRTLCLRRK*LLHLLDVNPQL Trigger: CAGTTGGGGGTTCACATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CCA 72 bp | AACTGTTATTCATGGGTCTGTACCTCCTCCTTCACCTaGATACCACCCATCTCAAAGGACTCTCTGTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NCYSWVCTSSFT*IPPISKDSLFE Trigger: CTCAAACAGAGAGTCCTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR TCA 72 bp | AAATGCTTCATTGATGTTCCTGTACTGGGAAGGTCTTaGATGCTCTCCAGGATGGGAAGGGAAAAGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KCFIDVPVLGRS*MLSRMGREKML Trigger: CAGCATCTTTTCCCTTCCCATCCTGGAGAGCATTCAAGACCTTCCCAGTACAGGAACATCAATGAAGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR GCA 72 bp | CAGTGCAGTGATTTAGAGCTTGCCTCCATGCGTGTGTaGATTCAACATGTACCAGAAGTTACAAGCAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: QCSDLELASMRV*IQHVPEVTSNL Trigger: AAGGTTGCTTGTAACTTCTGGTACATGTTGAATGCACACACGCATGGAGGCAAGCTCTAAATCACTGCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR CCA 72 bp | AACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTaGGCCAAGAGATATCATCAAAACACATCAAGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: NNQTAATPLWTP*AKRYHQNTSSY Trigger: GTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATACTGGTCAATATACAACTGAAGAAAAACGGAAACAGATGTGCGTCCTACTACATGGGACTTTCTaGTTGCCTGTGGGGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KNTGQYTTEEKRKQMCVLLHGTF*LPVGVR Trigger: CCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAG...TAGGACGCACATCTGTTTCCGTTTTTCTTCAGTTGTATATTGACCAGTATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCAGGAGGCCTTCTATTAATTCAGCAGATGTCACTTTaGAAACAGAGGTGCCCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SWPDSGLHFQKAGGLLLIQQMSL*KQRCPY Trigger: ATAAGGGCACCTCTGTTTCAAAAGTGACATCTGCTG...AATTAATAGAAGGCCTCCTGCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCAGGAGGCCTTCTATTAATTGCCCTAAGCTGTCTCTaGTGGCTTCAACTAAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SWPDSGLHFQKAGGLLLIALSCL*WLQLKI Trigger: TATTTTTAGTTGAAGCCACAAGAGACAGCTTAGGGC...AATTAATAGAAGGCCTCCTGCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR GCA 72 bp | CCCGCTCTCTACCTATATTTCAGACTAAACAGCTCTTaGAGGCGCCTTTCATGGGTGATCATGTTAATATTA | + |
|
Preference number: 3 (lower is better) Translates to: PALYLYFRLNSS*RRLSWVIMLIL Trigger: TAATATTAACATGATCACCCATGAAAGGCGCCTGCAAGAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR GCA 72 bp | GTGCATTCAACATGTACCAGAAGTTACAAGCAACCTTaGCATCCCCGCTCTCTACCTATATTTCAGACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VHSTCTRSYKQP*HPRSLPIFQTK Trigger: TTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTAACTTCTGGTACATGTTGAATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR CCA 72 bp | AGAAAAAGGCCCATTCATGAATGGAGTATCTGTAGGTaGGACACAGTAACATACATGATATGCCTGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RKRPIHEWSICR*DTVTYMICLLL Trigger: CAGAAGCAGGCATATCATGTATGTTACTGTGTCCCACCTACAGATACTCCATTCATGAATGGGCCTTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR GCA 72 bp | TCTACATTTCCAGAAAGCAGGAGGCCTTCTATTAATTaGACATCACACAGGGATTCTTTAGTTCCTGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: STFPESRRPSIN*TSHRDSLVPVL Trigger: GAGAACAGGAACTAAAGAATCCCTGTGTGATGTGCAATTAATAGAAGGCCTCCTGCTTTCTGGAAATGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CAA 90 bp | ATTGGCTTGAATACCGTTGCAGAAAAAGACACATGGGAACTGGCTATTGGGAAAAAAAAGAAATCCCAATaGGACTGCAATGAAGGACGA | + |
|
Preference number: 3 (lower is better) Translates to: IGLNTVAEKDTWELAIGKKKKSQ*DCNEGR Trigger: TCGTCCTTCATTGCAGTCCAATTGGGATTTCTTTTT...TTTCCCAATAGCCAGTTCCCATGTGTCTTTTTCTGCAACGGTATTCAAGCCAAT 41% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CAA 90 bp | ATAATGTATCAGTCTACAGTCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCTTCAACATCTTTTGCTaGCAATTCATTGTAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IMYQSTVLARFWSTFPESFNIFC*QFIVAE Trigger: CTCAGCTACAATGAATTGCAAGCAAAAGATGTTGAA...GCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGACTGTAGACTGATACATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR-3UTR CAA 90 bp | ATAATGTATCAGTCTACAGTCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCTTTTTAAAGCTAGGATaGTTAAACTCCACTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IMYQSTVLARFWSTFPESFLKLG*LNSTLL Trigger: GAGCAGAGTGGAGTTTAACAATCCTAGCTTTAAAAA...GCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGACTGTAGACTGATACATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR CCA 72 bp | TATTTCAGACTAAACAGCTCTTGCAGGCGCCTTTCATaGGTGATCATGTTAATATTAGCTCATACTAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YFRLNSSCRRLS*VIMLILAHTSD Trigger: ATCACTAGTATGAGCTAATATTAACATGATCACCCATGAAAGGCGCCTGCAAGAGCTGTTTAGTCTGAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR CCA 72 bp | CTCCGTTCTTTGAAAACACTGTTCAACCTTCTAGATTaGCTCACATCAACCTTTAATTACATCTGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LRSLKTLFNLLD*LTSTFNYICFM Trigger: CATGAAGCAGATGTAATTAAAGGTTGATGTGAGCCAATCTAGAAGGTTGAACAGTGTTTTCAAAGAACGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR TCA 72 bp | AATATTTTTAAAGTATGCTTTACAGTAACAGTGCAGTaGTTTAGAGCTTGCCTCCATGCGTGTGTGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: NIFKVCFTVTVQ*FRACLHACVHS Trigger: TGAATGCACACACGCATGGAGGCAAGCTCTAAATCACTGCACTGTTACTGTAAAGCATACTTTAAAAATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| 3UTR TCA 72 bp | ATTGGCTCACATCAACCTTTAATTACATCTGCTTCATaGAGTTCGTTAACAAGGCATTTCCCTAACATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IGSHQPLITSAS*SSLTRHFPNIK Trigger: TTTTATGTTAGGGAAATGCCTTGTTAACGAACTTCATGAAGCAGATGTAATTAAAGGTTGATGTGAGCCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| CDS-3UTR TCA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCGCTTGCCCCGGCTGTTaGGCCTCATGGCCGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MASRESRKGMGSCRKMAAACPGC*ASWPPR Trigger: GCGCGGCGGCCATGAGGCTCAACAGCCGGGGCAAGC...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCCACGCCCACAGCACATaGGCTCGCAGCCGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIHAHST*ARSRPS Trigger: GGATGGACGGCTGCGAGCTCATGTGCTGTGGGCGTG...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCTTGCACAGGCGTCCCTaGGTGCCCAGCGAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGILHRRP*VPSEPV Trigger: CACTGGCTCGCTGGGCACGCAGGGACGCCTGTGCAA...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCAAGCGGCTGTTGACCTaGACCAGCTTGCCCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIKRLLT*TSLPRL Trigger: CAGCCGGGGCAAGCTGGTGCAGGTCAACAGCCGCTT...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTGCTCCTGGGTGAGAGGGTGAGCCTTTTTGATTCATCTCTGGGATGTTACGCTTGCCCCGGCTGTTaGGCCTCATGGCCGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLLGERVSLFDSSLGCYACPGC*ASWPPR Trigger: GCGCGGCGGCCATGAGGCTCAACAGCCGGGGCAAGC...GTAACATCCCAGAGATGAATCAAAAAGGCTCACCCTCTCACCCAGGAGCAGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| CDS-3UTR TCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGACACGCCCACAGCACATaGGCTCGCAGCCGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EDNNQTAATPLWTPWAKRHAHST*ARSRPS Trigger: GGATGGACGGCTGCGAGCTCATGTGCTGTGGGCGTG...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCAGAACTTGGAAGACATaGCACCTCCAGCGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIRTWKT*HLQRSP Trigger: TGGGGACCGCTGGAGGTGCCATGTCTTCCAAGTTCT...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| CDS-3UTR CCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGAGGCATGCTCGGCTCATaGCGTTCACCACCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDNNQTAATPLWTPWAKRGMLGS*RSPPQL Trigger: CAGCTGGGGTGGTGAACGCCATGAGCCGAGCATGCC...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCTATCATACTTCTCCTTaGGGGCATCGCCCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIYHTSP*GHRPPS Trigger: GGAAGGTGGGCGATGCCCTCAAGGAGAAGTATGATA...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGAGTTCACCACCCCAGCTaGGCTCACCGCGTACGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EDNNQTAATPLWTPWAKRVHHPS*AHRVRE Trigger: TTCACGTACGCGGTGAGCGCAGCTGGGGTGGTGAAC...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCCACAGTAGTCCGGACTaGGGTCGATGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MASRESRKGMGSCRKMAAHSSPD*GRCRPG Trigger: ACCTGGTCTACATCGACCCCAGTCCGGACTACTGTG...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCGAGCCAGACACTCCATaGCACTTACAGGCTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIEPDTP*HLQATS Trigger: AGATGTAGCCTGTAAGTGTCATGGAGTGTCTGGCTC...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCTATTGTCCACTGTGCTaGAGTTCCATCTCCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIYCPLC*SSISDA Trigger: GGCATCGGAGATGGAACTGCAGCACAGTGGACAATA...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCGTTCATGAGGATGCGTaGGCTCTCATAGGAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGIVHEDA*ALIGTL Trigger: AAGGGTTCCTATGAGAGCGCACGCATCCTCATGAAC...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCAGTTTCTTCTGTCCTTaGGAAAGTCCTGCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAAIRKHGQQRVQKGHGISFFCP*ESPASW Trigger: CCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACT...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR CCA 90 bp | TGTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGGGCATGCTCGGCTCATaGCGTTCACCACCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CYSWVCTSSFTWIPPISKGMLGS*RSPPQL Trigger: CAGCTGGGGTGGTGAACGCCATGAGCCGAGCATGCC...CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGACTCGCCCTCCCGGCATaGTCGGCTCATGGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PISKDSLFEKKMAPTPSRLALPA*SAHGVH Trigger: GTGAACGCCATGAGCCGAGCATGCCGGGAGGGCGAG...TCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | GTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGGAGCCAGTGCTCTCGTTaGGCACACAGTAGTCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VIHGSVPPPSPGYHPSQRSQCSR*AHSSPD Trigger: GTCCGGACTACTGTGTGCGCAACGAGAGCACTGGCT...CCTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | TGTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGCCTCTGAGGTCTTGTTaGACAGGCGTCCCTGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CYSWVCTSSFTWIPPISKPLRSC*TGVPAC Trigger: GCACGCAGGGACGCCTGTGCAACAAGACCTCAGAGG...CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CAA 72 bp | GGTGTTCGCAGTGCTCAACTACATGGGACTTTCTTGTaGCCTGTGGGGGTGAGGGGTTGCAAATGGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVRSAQLHGTFL*PVGVRGCKWDS Trigger: TGAATCCCATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCACTGCGAACACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CAA 72 bp | AGAGGTGTTCGCAGTGCTCAACTACATGGGACTTTCTaGTTGCCTGTGGGGGTGAGGGGTTGCAAATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGVRSAQLHGTF*LPVGVRGCKWD Trigger: ATCCCATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCACTGCGAACACCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGTGTTGTGTAAGTTCATaGGGATGCGTGCGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSMASRESRKGMGSCRKMCCVSS*GCVRSH Trigger: ATGAGAGCGCACGCATCCTCATGAACTTACACAACA...CATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | CAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGATATCATCATATCATACTTCTCCTTaGGGGCATCGCCCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPNSCNTSVDSLGQEISSYHTSP*GHRPPS Trigger: GGAAGGTGGGCGATGCCCTCAAGGAGAAGTATGATA...TGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATGTGAACCTCGCCCTCCCGGCATaGTCGGCTCATGGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRTLCLRRKWLLHLLDVNLALPA*SAHGVH Trigger: GTGAACGCCATGAGCCGAGCATGCCGGGAGGGCGAG...GTTCACATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCTGGGCCAAGAGATATCATCAAAACACATCAAGTTACCGTACCTCCAAAGCCTCTGAGGTCTTGTTaGACAGGCGTCCCTGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGPRDIIKTHQVTVPPKPLRSC*TGVPAC Trigger: GCACGCAGGGACGCCTGTGCAACAAGACCTCAGAGG...CTTTGGAGGTACGGTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | TGTACCAGAGCACCTGCAATTCATTTTGGTCACAGGAACTGTTATTCATGGGTCGTTCACCACCCCAGCTaGGCTCACCGCGTACGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTRAPAIHFGHRNCYSWVVHHPS*AHRVRE Trigger: TTCACGTACGCGGTGAGCGCAGCTGGGGTGGTGAAC...GACCCATGAATAACAGTTCCTGTGACCAAAATGAATTGCAGGTGCTCTGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATGTGAACAAGCGGCTGTTGACCTaGACCAGCTTGCCCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRTLCLRRKWLLHLLDVNKRLLT*TSLPRL Trigger: CAGCCGGGGCAAGCTGGTGCAGGTCAACAGCCGCTT...GTTCACATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | CAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGATATCATCATACTGCATGTGGTCCTaGTACAAGTGGCAGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPNSCNTSVDSLGQEISSYCMWS*YKWQSF Trigger: GAAACTCTGCCACTTGTATCAGGACCACATGCAGTA...TGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGAAGCCAGTGCTCTCGTTaGGCACACAGTAGTCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PISKDSLFEKKMAPTPSRSQCSR*AHSSPD Trigger: GTCCGGACTACTGTGTGCGCAACGAGAGCACTGGCT...TCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGAGAGGCTGTGCACCTATaGTATATACTTCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: EDNNQTAATPLWTPWAKREAVHL*YILLTS Trigger: AGATGTCAGAAGTATATATCATAGGTGCACAGCCTC...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR GCA 90 bp | AAGAATACTGGTCAATATACAACTGAAGAAAAACGGAAACAGATGTGCGTCCTATTGCACAGGCGTCCCTaGGTGCCCAGCGAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTGQYTTEEKRKQMCVLLHRRP*VPSEPV Trigger: CACTGGCTCGCTGGGCACGCAGGGACGCCTGTGCAA...TAGGACGCACATCTGTTTCCGTTTTTCTTCAGTTGTATATTGACCAGTATTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGACACAGTAGTCCGGACTaGGGTCGATGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PISKDSLFEKKMAPTPSRHSSPD*GRCRPG Trigger: ACCTGGTCTACATCGACCCCAGTCCGGACTACTGTG...TCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS-3UTR TCA 90 bp | TACAAGCAACCTTGCCATCCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCGAGCCAGACACTCCATaGCACTTACAGGCTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: YKQPCHPRSLPIFQTKQLEPDTP*HLQATS Trigger: AGATGTAGCCTGTAAGTGTCATGGAGTGTCTGGCTC...GAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGGATGGCAAGGTTGCTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| CDS-3UTR GCA 90 bp | GAGGATAACAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGACTATTTGCATCACCCTaGCAAAGACAGAAGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDNNQTAATPLWTPWAKRLFASP*QRQKYC Trigger: ACAATACTTCTGTCTTTGGCAGGGTGATGCAAATAG...TCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTGTTATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CCA 90 bp | GTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGGGCTTCTATAACAACCTaGGCGAAGGAGAAAAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VIHGSVPPPSPGYHPSQRASITT*AKEKNV Trigger: CACGTTTTTCTCCTTCGCCCAGGTTGTTATAGAAGC...CCTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CCA 90 bp | ATAATGTATCAGTCTACAGTCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCGAAAGTCCTGCCAGTTaGCTGCAGAGAGGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IMYQSTVLARFWSTFPESESPAS*LQRGCA Trigger: TGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTC...GCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGACTGTAGACTGATACATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| CDS-3UTR GCA 90 bp | CCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATATTGTCCACTGTGCTaGAGTTCCATCTCCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PISKDSLFEKKMAPTPSRYCPLC*SSISDA Trigger: GGCATCGGAGATGGAACTGCAGCACAGTGGACAATA...TCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR GCA 90 bp | TGTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGAAGTATTGTCCACTGTaGTGCAGTTCCATCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: CYSWVCTSSFTWIPPISKKYCPL*CSSISD Trigger: ATCGGAGATGGAACTGCAGCACAGTGGACAATACTT...CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR GCA 90 bp | TGCTCAACTACATGGGACTTTCTTGTTGCCTGTGGGGGTGAGGGGTTGCAAATGCTATTTGCATCACCCTaGCAAAGACAGAAGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSTTWDFLVACGGEGLQMLFASP*QRQKYC Trigger: ACAATACTTCTGTCTTTGGCAGGGTGATGCAAATAG...CATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTGGGCCAAGAGATATCATCAAAACACATCAAGTTACCGTACCTCCAAAGAGCACCAGTGAAACTTaGAATGACAGCGTTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGPRDIIKTHQVTVPPKSTSET*NDSVRS Trigger: AGACCGAACGCTGTCATTGCAAGTTTCACTGGTGCT...CTTTGGAGGTACGGTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR TCA 90 bp | TGCTCAACTACATGGGACTTTCTTGTTGCCTGTGGGGGTGAGGGGTTGCAAATGTATACTTCTGACATCTaGACAGGGTTATTCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTTWDFLVACGGEGLQMYTSDI*TGLFIP Trigger: AGGTATGAATAACCCTGTTCAGATGTCAGAAGTATA...CATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR TCA 90 bp | TGTACCAGAGCACCTGCAATTCATTTTGGTCACAGGAACTGTTATTCATGGGTCTACTGCATGTGGTCCTaGTACAAGTGGCAGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTRAPAIHFGHRNCYSWVYCMWS*YKWQSF Trigger: GAAACTCTGCCACTTGTATCAGGACCACATGCAGTA...GACCCATGAATAACAGTTCCTGTGACCAAAATGAATTGCAGGTGCTCTGGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATGTGAACGTTCATGAGGATGCGTaGGCTCTCATAGGAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRTLCLRRKWLLHLLDVNVHEDA*ALIGTL Trigger: AAGGGTTCCTATGAGAGCGCACGCATCCTCATGAAC...GTTCACATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR TCA 90 bp | CAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATGTGAACTGTTGTGTAAGTTCATaGGGATGCGTGCGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRTLCLRRKWLLHLLDVNCCVSS*GCVRSH Trigger: ATGAGAGCGCACGCATCCTCATGAACTTACACAACA...GTTCACATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR GCA 90 bp | GATTTAGAGCTTGCCTCCATGCGTGTGTGCATTCAACATGTACCAGAAGTTACACTTACAGGCTACATCTaGCAGGTTGTATACTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLELASMRVCIQHVPEVTLTGYI*QVVYCP Trigger: AGGACAGTATACAACCTGGCAGATGTAGCCTGTAAG...TGTAACTTCTGGTACATGTTGAATGCACACACGCATGGAGGCAAGCTCTAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| CDS-3UTR GCA 90 bp | TGTACCAGAGCACCTGCAATTCATTTTGGTCACAGGAACTGTTATTCATGGGTCCTTACAGGCTACATCTaGCAGGTTGTATACTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTRAPAIHFGHRNCYSWVLTGYI*QVVYCP Trigger: AGGACAGTATACAACCTGGCAGATGTAGCCTGTAAG...GACCCATGAATAACAGTTCCTGTGACCAAAATGAATTGCAGGTGCTCTGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATGTGAACAGCACCAGTGAAACTTaGAATGACAGCGTTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRTLCLRRKWLLHLLDVNSTSET*NDSVRS Trigger: AGACCGAACGCTGTCATTGCAAGTTTCACTGGTGCT...GTTCACATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CCA 90 bp | CAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGATGTGAACCCATTAGGAAGAACTTaGAAGACATGGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRTLCLRRKWLLHLLDVNPLGRT*KTWHLQ Trigger: CTGGAGGTGCCATGTCTTCCAAGTTCTTCCTAATGG...GTTCACATCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
||
| CDS-3UTR CCA 90 bp | TCCTGGCCAGATTCTGGTCTACATTTCCAGAAAGCAGGAGGCCTTCTATTAATTGCTTCTATAACAACCTaGGCGAAGGAGAAAAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWPDSGLHFQKAGGLLLIASITT*AKEKNV Trigger: CACGTTTTTCTCCTTCGCCCAGGTTGTTATAGAAGC...AATTAATAGAAGGCCTCCTGCTTTCTGGAAATGTAGACCAGAATCTGGCCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR CAA 72 bp | CCCCGCTCTCTACCTATATTTCAGACTAAACAGCTCTaGCAGGCGCCTTTCATGGGTGATCATGTTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: PRSLPIFQTKQL*QAPFMGDHVNI Trigger: AATATTAACATGATCACCCATGAAAGGCGCCTGCAAGAGCTGTTTAGTCTGAAATATAGGTAGAGAGCGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| CDS-3UTR TCA 90 bp | TGTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGTATACTTCTGACATCTaGACAGGGTTATTCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: CYSWVCTSSFTWIPPISKYTSDI*TGLFIP Trigger: AGGTATGAATAACCCTGTTCAGATGTCAGAAGTATA...CTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| 3UTR CAA 72 bp | ACGGAAACAGATGTGCGTCCTAGAGCCACAAGTTGTTaGAATTTGCCCAGAAAAGCTATTTTAAACACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TETDVRPRATSC*NLPRKAILNTL Trigger: TAGAGTGTTTAAAATAGCTTTTCTGGGCAAATTCAAACAACTTGTGGCTCTAGGACGCACATCTGTTTCCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| CDS-3UTR TCA 90 bp | AAGAATACTGGTCAATATACAACTGAAGAAAAACGGAAACAGATGTGCGTCCTAGAGGCTGTGCACCTATaGTATATACTTCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTGQYTTEEKRKQMCVLEAVHL*YILLTS Trigger: AGATGTCAGAAGTATATATCATAGGTGCACAGCCTC...TAGGACGCACATCTGTTTCCGTTTTTCTTCAGTTGTATATTGACCAGTATTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR CAA 72 bp | ATAAAGATTGGTCTAAAATGTAAGTCTCTCCGTTCTTaGAAAACACTGTTCAACCTTCTAGATTGGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IKIGLKCKSLRS*KTLFNLLDWLT Trigger: TGTGAGCCAATCTAGAAGGTTGAACAGTGTTTTCAAAGAACGGAGAGACTTACATTTTAGACCAATCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| 3UTR CAA 72 bp | CTGTTATTTGAACACATAACTGCCCTAAGCTGTCTCTaGTGGCTTCAACTAAAAATATTTCTCTACATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFEHITALSCL*WLQLKIFLYMN Trigger: ATTCATGTAGAGAAATATTTTTAGTTGAAGCCACAAGAGACAGCTTAGGGCAGTTATGTGTTCAAATAACAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063465.12 |
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| CDS-3UTR CAA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCAGCTTGCCCCGGCTGTaGAGCCTCATGGCCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: MASRESRKGMGSCRKMAASLPRL*SLMAAA Trigger: CGCGGCGGCCATGAGGCTCAACAGCCGGGGCAAGCT...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCAGAAAGTCCTGCCAGTaGGCTGCAGAGAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MASRESRKGMGSCRKMAARKSCQ*AAERLC Trigger: GCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCT...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCCTCTCGGCTGCCTATTaGCATCACCCTGCCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MASRESRKGMGSCRKMAALSAAY*HHPAKD Trigger: GTCTTTGGCAGGGTGATGCAAATAGGCAGCCGAGAG...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | TGCTCAACTACATGGGACTTTCTTGTTGCCTGTGGGGGTGAGGGGTTGCAAATGTTGACCTGCACCAGCTaGCCCCGGCTGTTGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSTTWDFLVACGGEGLQMLTCTS*PRLLSL Trigger: GAGGCTCAACAGCCGGGGCAAGCTGGTGCAGGTCAA...CATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | TGCTCAACTACATGGGACTTTCTTGTTGCCTGTGGGGGTGAGGGGTTGCAAATGTGCGTGGTCGGGGAGTaGAAGCGGCTGTTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSTTWDFLVACGGEGLQMCVVGE*KRLLTC Trigger: GCAGGTCAACAGCCGCTTCAACTCCCCGACCACGCA...CATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | TGTACCAGAGCACCTGCAATTCATTTTGGTCACAGGAACTGTTATTCATGGGTCAGCTTGCCCCGGCTGTaGAGCCTCATGGCCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CTRAPAIHFGHRNCYSWVSLPRL*SLMAAA Trigger: CGCGGCGGCCATGAGGCTCAACAGCCGGGGCAAGCT...GACCCATGAATAACAGTTCCTGTGACCAAAATGAATTGCAGGTGCTCTGGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | TGCTCAACTACATGGGACTTTCTTGTTGCCTGTGGGGGTGAGGGGTTGCAAATGATCCCCTCTGAGGTCTaGTTGCACAGGCGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSTTWDFLVACGGEGLQMIPSEV*LHRRPC Trigger: GCAGGGACGCCTGTGCAACAAGACCTCAGAGGGGAT...CATTTGCAACCCCTCACCCCCACAGGCAACAAGAAAGTCCCATGTAGTTGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | CAACCAAACAGCTGCAACACCTCTGTGGACTCCCTGGGCCAAGAGATATCATCAAGAAAGTCCTGCCAGTaGGCTGCAGAGAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPNSCNTSVDSLGQEISSRKSCQ*AAERLC Trigger: GCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCT...TGATGATATCTCTTGGCCCAGGGAGTCCACAGAGGTGTTGCAGCTGTTTGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTGCCATTCGGAAGCATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCCTACGGCCTGCTTCATaGTTGTGTAAGTTCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAAIRKHGQQRVQKGHGILRPAS*LCKFMR Trigger: CCTCATGAACTTACACAACAATGAAGCAGGCCGTAG...GATCCCATGCCCTTTCTGGACTCTCTGCTGGCCATGCTTCCGAATGGCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | GTTATTCATGGGTCTGTACCTCCTCCTTCACCTGGATACCACCCATCTCAAAGGATCCCCTCTGAGGTCTaGTTGCACAGGCGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VIHGSVPPPSPGYHPSQRIPSEV*LHRRPC Trigger: GCAGGGACGCCTGTGCAACAAGACCTCAGAGGGGAT...CCTTTGAGATGGGTGGTATCCAGGTGAAGGAGGAGGTACAGACCCATGAATAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCAGCAGAGAGTCCAGAAAGGGCATGGGATCATGCAGGAAGATGGCTGCCGAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MASRESRKGMGSCRKMAAEFLLS*RKSCQL Trigger: CAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTC...GGCAGCCATCTTCCTGCATGATCCCATGCCCTTTCTGGACTCTCTGCTGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | CTCCCTGGGCCAAGAGATATCATCAAAACACATCAAGTTACCGTACCTCCAAAGTGCGTGGTCGGGGAGTaGAAGCGGCTGTTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGPRDIIKTHQVTVPPKCVVGE*KRLLTC Trigger: GCAGGTCAACAGCCGCTTCAACTCCCCGACCACGCA...CTTTGGAGGTACGGTAACTTGATGTGTTTTGATGATATCTCTTGGCCCAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS TCA 90 bp | CTTGAGAAAGTCCTGCCAGTTGGCTGCAGAGAGGCTGTGCACCTATaGTATATACTTCTGACATCTGAACAGGGTTATTCATACCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEKVLPVGCREAVHL*YILLTSEQGYSYLE Trigger: CTCTAGGTATGAATAACCCTGTTCAGATGTCAGAAGTATATATCATAGGTGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | CCCATCTCAAAGGACTCTCTGTTTGAGAAGAAAATGGCTCCTACACCTTCTAGACTACGGCCTGCTTCATaGTTGTGTAAGTTCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PISKDSLFEKKMAPTPSRLRPAS*LCKFMR Trigger: CCTCATGAACTTACACAACAATGAAGCAGGCCGTAG...TCTAGAAGGTGTAGGAGCCATTTTCTTCTCAAACAGAGAGTCCTTTGAGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS-3UTR CAA 90 bp | AAATGCAACTGTTCAAGTACACTAGGAACAGTTTTAGGGTACACCTGCAGGGTAGAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KCNCSSTLGTVLGYTCRVEFLLS*RKSCQL Trigger: CAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTC...TACCCTGCAGGTGTACCCTAAAACTGTTCCTAGTGTACTTGAACAGTTGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS CAA 72 bp | TTGAGCCTCATGGCCGCCGCGCTATCATACTTCTCCTaGAGGGCATCGCCCACCTTCCGGAAGTCCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLMAAALSYFS*RASPTFRKSAS Trigger: GCTGGCGGACTTCCGGAAGGTGGGCGATGCCCTCAAGGAGAAGTATGATAGCGCGGCGGCCATGAGGCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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| CDS CAA 72 bp | GTGGTCCTGATACAAGTGGCAGAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTGGCTGCAGAGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVLIQVAEFLLS*RKSCQLAAERL Trigger: CAGCCTCTCTGCAGCCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTCTGCCACTTGTATCAGGACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS CAA 90 bp | GTACTGCATGTGGTCCTGATACAAGTGGCAGAGTTTCTTCTGTCCTaGAGAAAGTCCTGCCAGTTGGCTGCAGAGAGGCTGTGCACCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VLHVVLIQVAEFLLS*RKSCQLAAERLCTY Trigger: ATAGGTGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTCTGCCACTTGTATCAGGACCACATGCAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS GCA 72 bp | GGAGCCAGACACTCCATGACACTTACAGGCTACATCTaGCAGGTTGTATACTGTCCTACGGCCTGCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: GARHSMTLTGYI*QVVYCPTACFI Trigger: AATGAAGCAGGCCGTAGGACAGTATACAACCTGGCAGATGTAGCCTGTAAGTGTCATGGAGTGTCTGGCTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS CAA 72 bp | GCAGAGTTTCTTCTGTCCTTGAGAAAGTCCTGCCAGTaGGCTGCAGAGAGGCTGTGCACCTATGATATATAC | + |
|
Preference number: 6 (lower is better) Translates to: AEFLLSLRKSCQ*AAERLCTYDIY Trigger: GTATATATCATAGGTGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCTCAAGGACAGAAGAAACTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
||
| CDS CCA 72 bp | CCTAGAGACCACCAAGAATTAGCTTCTATAACAACCTaGGCGAAGGAGAAAAACGTGGCCAAAGCCATTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRDHQELASITT*AKEKNVAKAIR Trigger: CCTAATGGCTTTGGCCACGTTTTTCTCCTTCGCCCAGGTTGTTATAGAAGCTAATTCTTGGTGGTCTCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063465.12 ENSMUST00000112272.2 |
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