Pregenerated sensors for WNT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000125Ensembl transcript IDs: ENSMUST00000000127.6
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGCCCGTCCGTCCGAGGCCGGCTGGGTCCAGGTCGTTTATCACATaGAGCTGGCAACAGTCCATGCTCCTTGCTGGCCAGTGCCGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PPVRPRPAGSRSFIT*SWQQSMLLAGQCRR Trigger: CCTTCGGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGCATGTGATAAACGACCTGGACCCAGCCGGCCTCGGACGGACGGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR TCA 90 bp | TCTGTAAAGCCGTACACCATCCAGAGCAGGGGGAGAGACGTTAGTTaGGAAAGAAGCCGCCCGTCCGTCCGAGGCCGGCTGGGTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SVKPYTIQSRGRDVS*ERSRPSVRGRLGPG Trigger: ACCTGGACCCAGCCGGCCTCGGACGGACGGGCGGCTTCTTTCTCAACTAACGTCTCTCCCCCTGCTCTGGATGGTGTACGGCTTTACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 90 bp | TGGGGTGCTAGGAAGGGATGGGAGGTGTCCCTAGAGCAGTGCTCATaGTCACATGGTAGAGAGTGCAGGCAAGGGCCTACTGGAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: WGARKGWEVSLEQCS*SHGRECRQGPTGAC Trigger: GCAGGCTCCAGTAGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAGGGACACCTCCCATCCCTTCCTAGCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 90 bp | GGCATTTGGGGTGCTAGGAAGGGATGGGAGGTGTCCCTAGAGCAGTaGTCATGGTCACATGGTAGAGAGTGCAGGCAAGGGCCTACTGGA | + |
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Preference number: 1 (lower is better) Translates to: GIWGARKGWEVSLEQ*SWSHGRECRQGPTG Trigger: TCCAGTAGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAGGGACACCTCCCATCCCTTCCTAGCACCCCAAATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 90 bp | GCAGCTGGCAACAGTCCATGCTCCTTGCTGGCCAGTGCCGAAGGCTaGCCTGGATCTAGATCCTGCTTCTCATGGGACTTCGATGAATGG | + |
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Preference number: 1 (lower is better) Translates to: AAGNSPCSLLASAEG*PGSRSCFSWDFDEW Trigger: CCATTCATCGAAGTCCCATGAGAAGCAGGATCTAGATCCAGGCCAGCCTTCGGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 90 bp | CTGGAAGGAGAGATGGGAAGGGGCATTTGGGGTGCTAGGAAGGGATaGGAGGTGTCCCTAGAGCAGTGCTCATGGTCACATGGTAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LEGEMGRGIWGARKG*EVSLEQCSWSHGRE Trigger: CTCTCTACCATGTGACCATGAGCACTGCTCTAGGGACACCTCCCATCCCTTCCTAGCACCCCAAATGCCCCTTCCCATCTCTCCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 90 bp | GAAGTGGGACTCTTTACCCTCCCCACCTGCCAACCATGTTTAGATTaGTCTCTAAGGTGCCCCGCTGCTCTCCTCGGTGTCTGCTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: EVGLFTLPTCQPCLD*SLRCPAALLGVCWL Trigger: TAACCAGCAGACACCGAGGAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTGGGGAGGGTAAAGAGTCCCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 90 bp | AGGCTGAGAAGGGCAGAGCAGCCCATTCTTTCTGGGTGTGGTGGATaGAGCCAGAAGAGACCTGCCTCCACATCTGACCTATTTACAAGG | + |
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Preference number: 1 (lower is better) Translates to: RLRRAEQPILSGCGG*SQKRPASTSDLFTR Trigger: CCTTGTAAATAGGTCAGATGTGGAGGCAGGTCTCTTCTGGCTCCATCCACCACACCCAGAAAGAATGGGCTGCTCTGCCCTTCTCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 90 bp | CAAGGTATGTCCAATTTAAATGGGAGTCGACGGACAAGAGGGGACTaGGGGGCTCTGTCCTACTTCACAGTTCCCACCTCAGAGGCATCT | + |
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Preference number: 1 (lower is better) Translates to: QGMSNLNGSRRTRGD*GALSYFTVPTSEAS Trigger: AGATGCCTCTGAGGTGGGAACTGTGAAGTAGGACAGAGCCCCGCAGTCCCCTCTTGTCCGTCGACTCCCATTTAAATTGGACATACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 90 bp | CTGCCTTCTAACACAAAGGAAGTGGGACTCTTTACCCTCCCCACCTaGCAACCATGTTTAGATTGCTCTCTAAGGTGCCCCGCTGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LPSNTKEVGLFTLPT*QPCLDCSLRCPAAL Trigger: GAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTGGGGAGGGTAAAGAGTCCCACTTCCTTTGTGTTAGAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 90 bp | AAGCGTTATCCAGTTGACTTGATTTCCAACTTCTGGAAGGAGAGATaGGAAGGGGCATTTGGGGTGCTAGGAAGGGATGGGAGGTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: KRYPVDLISNFWKER*EGAFGVLGRDGRCP Trigger: GGGACACCTCCCATCCCTTCCTAGCACCCCAAATGCCCCTTCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 90 bp | TACCATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTaGTTGCCTCTTTTGAATATCTATCTAATCCAGATCCTTGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: YHHASGTELGAASIR*LPLLNIYLIQILGN Trigger: GTTCCCAAGGATCTGGATTAGATAGATATTCAAAAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR TCA 90 bp | TTGTATCCGTTCTGCTCAAGTGTCCTCACACAAGCGTTATCCAGTTaGCTTGATTTCCAACTTCTGGAAGGAGAGATGGGAAGGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: LYPFCSSVLTQALSS*LDFQLLEGEMGRGI Trigger: AATGCCCCTTCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTGTGAGGACACTTGAGCAGAACGGATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 90 bp | TTTTTACAAAACTTTGGATACAGCAGGTTGGTAGGGACCTCCCATTaGATGCTATTACCTGACTATGGCGAGGATAATTACAATGCGCTC | + |
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Preference number: 1 (lower is better) Translates to: FLQNFGYSRLVGTSH*MLLPDYGEDNYNAL Trigger: GAGCGCATTGTAATTATCCTCGCCATAGTCAGGTAATAGCATCCAATGGGAGGTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR TCA 90 bp | CATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTTTGAGGGGCGTGGAGATCTaGCTGTCGCTCCAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: HASGTELGAASIRCLPLLRGVEI*LSLQGR Trigger: TCTGCCCTGGAGCGACAGTCAGATCTCCACGCCCCT...CAAAAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGTTAGCAAGGCTGAGAAGGGCAGAGCAGCCCATTCTTTCTGGGTGTGGTCTTGCTCCCACTGTTaGCCAGGGGCCTCCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: LLVSKAEKGRAAHSFWVWSCSHC*PGASPS Trigger: TGATGGGGAGGCCCCTGGCCAACAGTGGGAGCAAGA...CCACACCCAGAAAGAATGGGCTGCTCTGCCCTTCTCAGCCTTGCTAACCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CAA 90 bp | GGAAGTGGGACTCTTTACCCTCCCCACCTGCCAACCATGTTTAGATaGCTCTCTAAGGTGCCCCGCTGCTCTCCTCGGTGTCTGCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: GSGTLYPPHLPTMFR*LSKVPRCSPRCLLV Trigger: AACCAGCAGACACCGAGGAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTGGGGAGGGTAAAGAGTCCCACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | GATTTCCAACTTCTGGAAGGAGAGATGGGAAGGGGCATTTGGGGTGCTAGGAAGGTCCATGCTCCTTGCTaGCCAGTGCCGAAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: DFQLLEGEMGRGIWGARKVHAPC*PVPKAG Trigger: GCCAGCCTTCGGCACTGGCCAGCAAGGAGCATGGAC...CTTCCTAGCACCCCAAATGCCCCTTCCCATCTCTCCTTCCAGAAGTTGGAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CAA 90 bp | GTTCCCACCTCAGAGGCATCTTGGAATGTCACGAGTAGAGGCAGCTaGGACACAGAATCTCGCCATGGTCTTGTCCTTCCCACCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VPTSEASWNVTSRGS*DTESRHGLVLPTRP Trigger: TGGCCTGGTGGGAAGGACAAGACCATGGCGAGATTCTGTGTCCAAGCTGCCTCTACTCGTGACATTCCAAGATGCCTCTGAGGTGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR GCA 90 bp | GTACCATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCAGGTCGTTTATCACATaGAGCTGGCAACAGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: VPSCVGNRAGSCLHSLLARSFIT*SWQQSM Trigger: CATGGACTGTTGCCAGCTGCATGTGATAAACGACCT...GGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | CATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTACCTCAGAGGCATCTTaGAATGTCACGAGTAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: HHASGTELGAASIRCLPLTSEAS*NVTSRG Trigger: GCCTCTACTCGTGACATTCCAAGATGCCTCTGAGGT...AAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCCTAGAGCAGTGCTCATGGTCACATGGTAGAGAGTGCAGGCAAGGGCCTCATTCTTTCTGGGTGTaGTGGATGGAGCCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSLEQCSWSHGRECRQGPHSFWV*WMEPEE Trigger: CTCTTCTGGCTCCATCCACCACACCCAGAAAGAATG...AGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAGGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGCAAGCCAACTGCACAACAGGAAAGAAGTGGCTGACCCCTCGTCAAGCCGCTGCCTCCATTCGCTaGTTGCCTCTTTTGAATATC | + |
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Preference number: 2 (lower is better) Translates to: AWQANCTTGKKWLTPRQAAASIR*LPLLNI Trigger: GATATTCAAAAGAGGCAAGCAGCGAATGGAGGCAGC...GGCTTGACGAGGGGTCAGCCACTTCTTTCCTGTTGTGCAGTTGGCTTGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR TCA 90 bp | CTAGAGCAGTGCTCATGGTCACATGGTAGAGAGTGCAGGCAAGGGCCTACTGGACAGATCCTTGGGAACTaGGATAGGCTATCCCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LEQCSWSHGRECRQGPTGQILGN*DRLSLL Trigger: TAAAAGGGATAGCCTATCTCAGTTCCCAAGGATCTG...TCCAGTAGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR GCA 90 bp | CACAAGCGTTATCCAGTTGACTTGATTTCCAACTTCTGGAAGGAGAGATGGGAAGCTGGCAACAGTCCATaGTCCTTGCTGGCCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HKRYPVDLISNFWKERWEAGNSP*SLLASA Trigger: GGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGC...TTCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGACTTGTAAATTGTTGTATCCGTTCTGCTCAAGTGTCCTCACACAAGCGGGGAGAGACGTTAGTTaGGAAAGAAGCCGCCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: EETCKLLYPFCSSVLTQAGRDVS*ERSRPS Trigger: GGACGGGCGGCTTCTTTCTCAACTAACGTCTCTCCC...CGCTTGTGTGAGGACACTTGAGCAGAACGGATACAACAATTTACAAGTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR GCA 90 bp | GATTTCCAACTTCTGGAAGGAGAGATGGGAAGGGGCATTTGGGGTGCTAGGAAGTTTACCCTCCCCACCTaGCAACCATGTTTAGATTGC | + |
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Preference number: 2 (lower is better) Translates to: DFQLLEGEMGRGIWGARKFTLPT*QPCLDC Trigger: GCAATCTAAACATGGTTGGCAGGTGGGGAGGGTAAA...CTTCCTAGCACCCCAAATGCCCCTTCCCATCTCTCCTTCCAGAAGTTGGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CAA 90 bp | ATCCGTTCTGCTCAAGTGTCCTCACACAAGCGTTATCCAGTTGACTaGATTTCCAACTTCTGGAAGGAGAGATGGGAAGGGGCATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: IRSAQVSSHKRYPVD*ISNFWKERWEGAFG Trigger: CCCAAATGCCCCTTCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTGTGAGGACACTTGAGCAGAACGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGACTTGTAAATTGTTGTATCCGTTCTGCTCAAGTGTCCTCACACAAGCGGGCCGCCCAGAACTCTaGGGTCTTCAAAACTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: EETCKLLYPFCSSVLTQAGRPEL*GLQNSR Trigger: TCTTGAGTTTTGAAGACCTCAGAGTTCTGGGCGGCC...CGCTTGTGTGAGGACACTTGAGCAGAACGGATACAACAATTTACAAGTCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTCAAGTGTCCTCACACAAGCGTTATCCAGTTGACTTGATTTCCAACTTCCAACCATGTTTAGATTaGTCTCTAAGGTGCCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SAQVSSHKRYPVDLISNFQPCLD*SLRCPA Trigger: AGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTG...GAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTGTGAGGACACTTGAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTCAAGTGTCCTCACACAAGCGTTATCCAGTTGACTTGATTTCCAACTTCAGATCCTGCTTCTCATaGGACTTCGATGAATGGATC | + |
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Preference number: 2 (lower is better) Translates to: SAQVSSHKRYPVDLISNFRSCFS*DFDEWI Trigger: GATCCATTCATCGAAGTCCCATGAGAAGCAGGATCT...GAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTGTGAGGACACTTGAGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | GGAACTGAGATAGGCTATCCCTTTTACAAGTGGGAAGAAGGGCTTGTTAAGGATTTTATCACATGCAGCTaGCAACAGTCCATGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GTEIGYPFYKWEEGLVKDFITCS*QQSMLL Trigger: AAGGAGCATGGACTGTTGCCAGCTGCATGTGATAAA...ATCCTTAACAAGCCCTTCTTCCCACTTGTAAAAGGGATAGCCTATCTCAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | CAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTTGGTAGGGACCACAGAATCTCGCCATaGTCTTGTCCTTCCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: QQLLQLFTKLWIQQVGRDHRISP*SCPSHQ Trigger: CTGGTGGGAAGGACAAGACCATGGCGAGATTCTGTG...GTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CAA 90 bp | ATCAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTaGGTAGGGACCTCCCATTGGATGCTATTACCTGACTATGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: INNFYNFLQNFGYSR*VGTSHWMLLPDYGE Trigger: CTCGCCATAGTCAGGTAATAGCATCCAATGGGAGGTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGACTTGTAAATTGTTGTATCCGTTCTGCTCAAGTGTCCTCACACAAGCGAGCTACACCTATCTATaGCTTTTCTCAGAACGACAA | + |
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Preference number: 2 (lower is better) Translates to: EETCKLLYPFCSSVLTQASYTYL*LFSERQ Trigger: TTGTCGTTCTGAGAAAAGCCATAGATAGGTGTAGCT...CGCTTGTGTGAGGACACTTGAGCAGAACGGATACAACAATTTACAAGTCTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR TCA 90 bp | CAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTTGGTAGGGACTTTATCTCCTCTTTCTaGTTCTCCTTAAGACGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QQLLQLFTKLWIQQVGRDFISSF*FSLRRS Trigger: ACTCCGTCTTAAGGAGAATCAGAAAGAGGAGATAAA...GTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR-3UTR GCA 90 bp | CAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTTGGTAGGGACATTTTCTTTAACATGTaGAAAGGTAAGCCTCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: QQLLQLFTKLWIQQVGRDIFFNM*KGKPRV Trigger: GACTCGAGGCTTACCTTTGCACATGTTAAAGAAAAT...GTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR TCA 72 bp | CCGTACACCATCCAGAGCAGGGGGAGAGACGTTAGTTaGGAAAGAAGCCGCCCGTCCGTCCGAGGCCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PYTIQSRGRDVS*ERSRPSVRGRL Trigger: CAGCCGGCCTCGGACGGACGGGCGGCTTCTTTCTCAACTAACGTCTCTCCCCCTGCTCTGGATGGTGTACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 72 bp | CGTCCGAGGCCGGCTGGGTCCAGGTCGTTTATCACATaGAGCTGGCAACAGTCCATGCTCCTTGCTGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: RPRPAGSRSFIT*SWQQSMLLAGQ Trigger: CTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGCATGTGATAAACGACCTGGACCCAGCCGGCCTCGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 72 bp | TGCTCTCTAAGGTGCCCCGCTGCTCTCCTCGGTGTCTaGTGGTTAGCAAGGCTGAGAAGGGCAGAGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: CSLRCPAALLGV*WLARLRRAEQP Trigger: GGGCTGCTCTGCCCTTCTCAGCCTTGCTAACCAGCAGACACCGAGGAGAGCAGCGGGGCACCTTAGAGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 72 bp | TCTCTAAGGTGCCCCGCTGCTCTCCTCGGTGTCTGCTaGTTAGCAAGGCTGAGAAGGGCAGAGCAGCCCATT | + |
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Preference number: 3 (lower is better) Translates to: SLRCPAALLGVC*LARLRRAEQPI Trigger: AATGGGCTGCTCTGCCCTTCTCAGCCTTGCTAACCAGCAGACACCGAGGAGAGCAGCGGGGCACCTTAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 72 bp | TCCCTAGAGCAGTGCTCATGGTCACATGGTAGAGAGTaGAGGCAAGGGCCTACTGGAGCCTGCTTGGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: SLEQCSWSHGRE*RQGPTGACLAS Trigger: GCTTGCCAAGCAGGCTCCAGTAGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 72 bp | GCTGAGAAGGGCAGAGCAGCCCATTCTTTCTGGGTGTaGTGGATGGAGCCAGAAGAGACCTGCCTCCACATC | + |
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Preference number: 3 (lower is better) Translates to: AEKGRAAHSFWV*WMEPEETCLHI Trigger: GATGTGGAGGCAGGTCTCTTCTGGCTCCATCCACCACACCCAGAAAGAATGGGCTGCTCTGCCCTTCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 72 bp | AGCAAGGCTGAGAAGGGCAGAGCAGCCCATTCTTTCTaGGTGTGGTGGATGGAGCCAGAAGAGACCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SKAEKGRAAHSF*VWWMEPEETCL Trigger: GAGGCAGGTCTCTTCTGGCTCCATCCACCACACCCAGAAAGAATGGGCTGCTCTGCCCTTCTCAGCCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR GCA 72 bp | CTCTTTACCCTCCCCACCTGCCAACCATGTTTAGATTaGTCTCTAAGGTGCCCCGCTGCTCTCCTCGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LFTLPTCQPCLD*SLRCPAALLGV Trigger: GACACCGAGGAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTGGGGAGGGTAAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 72 bp | AACAGTCCATGCTCCTTGCTGGCCAGTGCCGAAGGCTaGCCTGGATCTAGATCCTGCTTCTCATGGGACTTC | + |
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Preference number: 3 (lower is better) Translates to: NSPCSLLASAEG*PGSRSCFSWDF Trigger: GAAGTCCCATGAGAAGCAGGATCTAGATCCAGGCCAGCCTTCGGCACTGGCCAGCAAGGAGCATGGACTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 72 bp | TATCACATGCAGCTGGCAACAGTCCATGCTCCTTGCTaGCCAGTGCCGAAGGCTGGCCTGGATCTAGATCCT | + |
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Preference number: 3 (lower is better) Translates to: YHMQLATVHAPC*PVPKAGLDLDP Trigger: AGGATCTAGATCCAGGCCAGCCTTCGGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGCATGTGATA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| 3UTR CCA 72 bp | AGGGCAGAGCAGCCCATTCTTTCTGGGTGTGGTGGATaGAGCCAGAAGAGACCTGCCTCCACATCTGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: RAEQPILSGCGG*SQKRPASTSDL Trigger: TAGGTCAGATGTGGAGGCAGGTCTCTTCTGGCTCCATCCACCACACCCAGAAAGAATGGGCTGCTCTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | CCTGCTTGGCAAGCCAACTGCACAACAGGAAAGAAGTaGCTGACCCCTCGTCAAGCCAGCATTAGCAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: PAWQANCTTGKK*LTPRQASISRP Trigger: GGGTCTGCTAATGCTGGCTTGACGAGGGGTCAGCCACTTCTTTCCTGTTGTGCAGTTGGCTTGCCAAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | GTAGAGAGTGCAGGCAAGGGCCTACTGGAGCCTGCTTaGCAAGCCAACTGCACAACAGGAAAGAAGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VESAGKGLLEPA*QANCTTGKKWL Trigger: CAGCCACTTCTTTCCTGTTGTGCAGTTGGCTTGCCAAGCAGGCTCCAGTAGGCCCTTGCCTGCACTCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTTTGTCAAAACTCAAGATCTaGCTCCCACTGTTGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HASGTELGAASIRCLPLLSKLKI*LPLLAR Trigger: CCTGGCCAACAGTGGGAGCAAGATCTTGAGTTTTGA...CAAAAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR TCA 72 bp | GGACACTGTAGAACAACAGAAAGGGGCGTGGAGATCTaGCTGTCGCTCCAGGGCAGAACAGGGCTAGCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GHCRTTERGVEI*LSLQGRTGLAK Trigger: TTTCGCTAGCCCTGTTCTGCCCTGGAGCGACAGTCAGATCTCCACGCCCCTTTCTGTTGTTCTACAGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR GCA 72 bp | GTTTATCACATGCAGCTGGCAACAGTCCATGCTCCTTaGTGGCCAGTGCCGAAGGCTGGCCTGGATCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VYHMQLATVHAP*WPVPKAGLDLD Trigger: ATCTAGATCCAGGCCAGCCTTCGGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGCATGTGATAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR GCA 72 bp | CCAACCATGTTTAGATTGCTCTCTAAGGTGCCCCGCTaGTCTCCTCGGTGTCTGCTGGTTAGCAAGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTMFRLLSKVPR*SPRCLLVSKAE Trigger: CTCAGCCTTGCTAACCAGCAGACACCGAGGAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR GCA 72 bp | CATGGTAGAGAGTGCAGGCAAGGGCCTACTGGAGCCTaGTTGGCAAGCCAACTGCACAACAGGAAAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HGRECRQGPTGA*LASQLHNRKEV Trigger: CACTTCTTTCCTGTTGTGCAGTTGGCTTGCCAAGCAGGCTCCAGTAGGCCCTTGCCTGCACTCTCTACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTAGACAGAAGCGGGAAAGGACAAATTCTTTGTTCTGCCCCATTCCCCCATAACAGTCCATGCTCCTaGCTGGCCAGTGCCGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLDRSGKGQILCSAPFPHNSPCS*LASAEG Trigger: GCCTTCGGCACTGGCCAGCAAGGAGCATGGACTGTT...ATGGGGGAATGGGGCAGAACAAAGAATTTGTCCTTTCCCGCTTCTGTCTAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR TCA 72 bp | CTTGGCAAGCCAACTGCACAACAGGAAAGAAGTGGCTaGCCCCTCGTCAAGCCAGCATTAGCAGACCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGKPTAQQERSG*PLVKPALADPR Trigger: TCTAGGGTCTGCTAATGCTGGCTTGACGAGGGGTCAGCCACTTCTTTCCTGTTGTGCAGTTGGCTTGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | GGATCTAGATCCTGCTTCTCATGGGACTTCGATGAATaGATCCAGCCGCACAATCTACCCCTTCCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GSRSCFSWDFDE*IQPHNLPLPSA Trigger: GGCACTGGGAAGGGGTAGATTGTGCGGCTGGATCCATTCATCGAAGTCCCATGAGAAGCAGGATCTAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | GCCGAAGGCTGGCCTGGATCTAGATCCTGCTTCTCATaGGACTTCGATGAATGGATCCAGCCGCACAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: AEGWPGSRSCFS*DFDEWIQPHNL Trigger: TAGATTGTGCGGCTGGATCCATTCATCGAAGTCCCATGAGAAGCAGGATCTAGATCCAGGCCAGCCTTCGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | GGACGCAGGGTAGTCTGCCTTCTAACACAAAGGAAGTaGGACTCTTTACCCTCCCCACCTGCCAACCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: GRRVVCLLTQRK*DSLPSPPANHV Trigger: AACATGGTTGGCAGGTGGGGAGGGTAAAGAGTCCCACTTCCTTTGTGTTAGAAGGCAGACTACCCTGCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR TCA 72 bp | TGTTCTGCAGATGGCTTCCCAGGCCGCCCAGAACTCTaGGGTCTTCAAAACTCAAGATCTTGCTCCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: CSADGFPGRPEL*GLQNSRSCSHC Trigger: ACAGTGGGAGCAAGATCTTGAGTTTTGAAGACCTCAGAGTTCTGGGCGGCCTGGGAAGCCATCTGCAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | CAGAGGCATCTTGGAATGTCACGAGTAGAGGCAGCTTaGACACAGAATCTCGCCATGGTCTTGTCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QRHLGMSRVEAA*TQNLAMVLSFP Trigger: TGGGAAGGACAAGACCATGGCGAGATTCTGTGTCCAAGCTGCCTCTACTCGTGACATTCCAAGATGCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR GCA 72 bp | AACACAAAGGAAGTGGGACTCTTTACCCTCCCCACCTaGCAACCATGTTTAGATTGCTCTCTAAGGTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: NTKEVGLFTLPT*QPCLDCSLRCP Trigger: GGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTGGGGAGGGTAAAGAGTCCCACTTCCTTTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR GCA 72 bp | GCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTaGTTGCCTCTTTTGAATATCTATCTAATCCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: ASGTELGAASIR*LPLLNIYLIQI Trigger: GATCTGGATTAGATAGATATTCAAAAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR-3UTR CAA 90 bp | GATTTCCAACTTCTGGAAGGAGAGATGGGAAGGGGCATTTGGGGTGCTAGGAAGAGTGGGAAGAAGGGCTaGTTAAGGATCTCTTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DFQLLEGEMGRGIWGARKSGKKG*LRISCL Trigger: AAGACAAGAGATCCTTAACAAGCCCTTCTTCCCACT...CTTCCTAGCACCCCAAATGCCCCTTCCCATCTCTCCTTCCAGAAGTTGGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR TCA 72 bp | TTCTGCTCAAGTGTCCTCACACAAGCGTTATCCAGTTaGCTTGATTTCCAACTTCTGGAAGGAGAGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FCSSVLTQALSS*LDFQLLEGEMG Trigger: TCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTGTGAGGACACTTGAGCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | TTAAGGATCTCTTGTCTTTCTGGTTACTTCAGCCAATaGGAGAAAAGGACGCAGGGTAGTCTGCCTTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LRISCLSGYFSQ*EKRTQGSLPSN Trigger: GTTAGAAGGCAGACTACCCTGCGTCCTTTTCTCCCATTGGCTGAAGTAACCAGAAAGACAAGAGATCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | AACTTTGGATACAGCAGGTTGGTAGGGACCTCCCATTaGATGCTATTACCTGACTATGGCGAGGATAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: NFGYSRLVGTSH*MLLPDYGEDNY Trigger: GTAATTATCCTCGCCATAGTCAGGTAATAGCATCCAATGGGAGGTCCCTACCAACCTGCTGTATCCAAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGCGTTATCCAGTTGACTTGATTTCCAACTTCTGGAAGGAGAGATGGGAAGCCTCCATTCGCTGCTaGCCTCTTTTGAATATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: HKRYPVDLISNFWKERWEASIRC*PLLNIY Trigger: ATAGATATTCAAAAGAGGCAAGCAGCGAATGGAGGC...TTCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CCA 72 bp | TCCTTGGGAACTGAGATAGGCTATCCCTTTTACAAGTaGGAAGAAGGGCTTGTTAAGGATCTCTTGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLGTEIGYPFYK*EEGLVKDLLSF Trigger: GAAAGACAAGAGATCCTTAACAAGCCCTTCTTCCCACTTGTAAAAGGGATAGCCTATCTCAGTTCCCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGCGTTATCCAGTTGACTTGATTTCCAACTTCTGGAAGGAGAGATGGGAACGCTGCTTGCCTCTTTaGAATATCTATCTAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HKRYPVDLISNFWKERWERCLPL*NIYLIQ Trigger: CTGGATTAGATAGATATTCAAAAGAGGCAAGCAGCG...TTCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR TCA 72 bp | CTTTTGAATATCTATCTAATCCAGATCCTTGGGAACTaGGATAGGCTATCCCTTTTACAAGTGGGAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLNIYLIQILGN*DRLSLLQVGRR Trigger: CCTTCTTCCCACTTGTAAAAGGGATAGCCTATCTCAGTTCCCAAGGATCTGGATTAGATAGATATTCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR GCA 90 bp | CCCGCTGCTCTCCTCGGTGTCTGCTGGTTAGCAAGGCTGAGAAGGGCAGAGCAGGCCAGAGATGTGTACTaGTGGCCCAGGGCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PAALLGVCWLARLRRAEQARDVY*WPRARD Trigger: GTCCCTGGCCCTGGGCCAGCAGTACACATCTCTGGC...CTGCTCTGCCCTTCTCAGCCTTGCTAACCAGCAGACACCGAGGAGAGCAGCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR TCA 90 bp | ACACCATCCAGAGCAGGGGGAGAGACGTTAGTTGAGAAAGAAGCCGCCCGTCCGCGATGCCGTGGGAGGTaGCATTGCAAGTCCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPSRAGGETLVEKEAARPRCRGR*HCKSGP Trigger: GGGACCGGACTTGCAATGTCACCTCCCACGGCATCG...CGGACGGGCGGCTTCTTTCTCAACTAACGTCTCTCCCCCTGCTCTGGATGGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR GCA 90 bp | TACCATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTGCCGAGGCGATGGCATaGACGAAGGCCGATTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: YHHASGTELGAASIRCLPAEAMA*TKADSR Trigger: CCGTGAATCGGCCTTCGTGCATGCCATCGCCTCGGC...AGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR TCA 90 bp | AAAGAAGCCGCCCGTCCGTCCGAGGCCGGCTGGGTCCAGGTCGTTTATCACATGTGGCCCCTTATGATGTaGGTCACAGCCGCAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KEAARPSEAGWVQVVYHMWPLMM*VTAADG Trigger: ACCATCTGCGGCTGTGACTCACATCATAAGGGGCCA...CATGTGATAAACGACCTGGACCCAGCCGGCCTCGGACGGACGGGCGGCTTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | CTCGCCATGGTCTTGTCCTTCCCACCAGGCCAAGAGCTCACACTAGCCCAGCCTTGCAAGTCCGGTCCCTaGTACCAAAGGAGCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAMVLSFPPGQELTLAQPCKSGP*YQRSPS Trigger: AGACGGGCTCCTTTGGTACCAGGGACCGGACTTGCA...AGGCTGGGCTAGTGTGAGCTCTTGGCCTGGTGGGAAGGACAAGACCATGGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR GCA 90 bp | CATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTTTGGCTGGCACTCCTGGATaGCCAGCTTCACACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HASGTELGAASIRCLPLLAGTPG*PASHLL Trigger: CAGAAGGTGTGAAGCTGGGCATCCAGGAGTGCCAGC...CAAAAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCAACCATGTTTAGATTGCTCTCTAAGGTGCCCCGCTGCTCTCCTCGGAGAGATGTGTACTGCTaGCCCAGGGCCAGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLPTMFRLLSKVPRCSPRRDVYC*PRARDH Trigger: GTGGTCCCTGGCCCTGGGCCAGCAGTACACATCTCT...CCGAGGAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | CATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTTTGAGGCCGATTCACGGGTaGCTTTGTCCAAGACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HASGTELGAASIRCLPLLRPIHG*LCPRQA Trigger: GGCCTGTCTTGGACAAAGCCACCCGTGAATCGGCCT...CAAAAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | GTGTCCCTAGAGCAGTGCTCATGGTCACATGGTAGAGAGTGCAGGCAAGGGCCTCACCAGCCGAGGCGATaGCATGCACGAAGGCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEQCSWSHGRECRQGPHQPRR*HARRPI Trigger: AATCGGCCTTCGTGCATGCCATCGCCTCGGCTGGTG...AGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAGGGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCAACCATGTTTAGATTGCTCTCTAAGGTGCCCCGCTGCTCTCCTCGGAGTCACAGCCGCAGATaGTGGAGGTTCCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPTMFRLLSKVPRCSPRSHSRR*WRFPQR Trigger: GCGCTGAGGGAACCTCCACCATCTGCGGCTGTGACT...CCGAGGAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | TACCATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTAGCCCGTCTCTGGGTTaGGCTCACAAAAGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YHHASGTELGAASIRCLPSPSLG*AHKSWG Trigger: CCCCCAACTTTTGTGAGCCCAACCCAGAGACGGGCT...AGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR TCA 90 bp | CCATTCTTTCTGGGTGTGGTGGATGGAGCCAGAAGAGACCTGCCTCCACATCTGCCAGGTGGCCCCTTATaGTGTGAGTCACAGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFFLGVVDGARRDLPPHLPGGPL*CESQPQ Trigger: CTGCGGCTGTGACTCACATCATAAGGGGCCACCTGG...CAGATGTGGAGGCAGGTCTCTTCTGGCTCCATCCACCACACCCAGAAAGAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR TCA 90 bp | GTCGTTTATCACATGCAGCTGGCAACAGTCCATGCTCCTTGCTGGCCAGTGCCGCTGCTACGCTGGGCATaGTCTCGATGTAATTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVYHMQLATVHAPCWPVPLLRWA*SRCNCG Trigger: GCCGCAATTACATCGAGATCATGCCCAGCGTAGCAG...CGGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGCATGTGATAAACGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTAGACAGAAGCGGGAAAGGACAAATTCTTTGTTCTGCCCCATTCCCCCATCTTGGGGACCAGGCCTaGGATGGAGCCGCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLDRSGKGQILCSAPFPHLGDQA*DGAAEQ Trigger: CTGCTCTGCGGCTCCATCCCAGGCCTGGTCCCCAAG...ATGGGGGAATGGGGCAGAACAAAGAATTTGTCCTTTCCCGCTTCTGTCTAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | GTCGTTTATCACATGCAGCTGGCAACAGTCCATGCTCCTTGCTGGCCAGTGCCGGCATGTGGTCCAGGATaGTCGTTCGGCCTGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVYHMQLATVHAPCWPVPACGPG*SFGLLH Trigger: ATGAAGCAGGCCGAACGACCATCCTGGACCACATGC...CGGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGCATGTGATAAACGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CAA 72 bp | CGTTTATCACATGCAGCTGGCAACAGTCCATGCTCCTaGCTGGCCAGTGCCGAAGGCTGGCCTGGATCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSHAAGNSPCS*LASAEGWPGSR Trigger: TCTAGATCCAGGCCAGCCTTCGGCACTGGCCAGCAAGGAGCATGGACTGTTGCCAGCTGCATGTGATAAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CAA 72 bp | GTAGAGGCAGCTTGGACACAGAATCTCGCCATGGTCTaGTCCTTCCCACCAGGCCAAGAGCTCACACTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VEAAWTQNLAMV*SFPPGQELTLA Trigger: GGCTAGTGTGAGCTCTTGGCCTGGTGGGAAGGACAAGACCATGGCGAGATTCTGTGTCCAAGCTGCCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CAA 72 bp | GGTAGAGAGTGCAGGCAAGGGCCTACTGGAGCCTGCTaGGCAAGCCAACTGCACAACAGGAAAGAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRECRQGPTGAC*ASQLHNRKEVA Trigger: AGCCACTTCTTTCCTGTTGTGCAGTTGGCTTGCCAAGCAGGCTCCAGTAGGCCCTTGCCTGCACTCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR CCA 90 bp | GTGTCCCTAGAGCAGTGCTCATGGTCACATGGTAGAGAGTGCAGGCAAGGGCCTAGACAGGCCCAAAGATaGCCAGGCTGTCATCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLEQCSWSHGRECRQGPRQAQR*PGCHLW Trigger: CCATAGATGACAGCCTGGCCATCTTTGGGCCTGTCT...AGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAGGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CAA 72 bp | ACTCTTTACCCTCCCCACCTGCCAACCATGTTTAGATaGCTCTCTAAGGTGCCCCGCTGCTCTCCTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLYPPHLPTMFR*LSKVPRCSPRC Trigger: ACACCGAGGAGAGCAGCGGGGCACCTTAGAGAGCAATCTAAACATGGTTGGCAGGTGGGGAGGGTAAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCCCTAGAGCAGTGCTCATGGTCACATGGTAGAGAGTGCAGGCAAGGGCCTCCTGCTTCATTGTTGTaGTTGTTCATAGCTGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLEQCSWSHGRECRQGPPASLL*LFIAER Trigger: CCGCTCAGCTATGAACAAGCACAACAATGAAGCAGG...AGGCCCTTGCCTGCACTCTCTACCATGTGACCATGAGCACTGCTCTAGGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| 3UTR CAA 72 bp | TCAGAGGCATCTTGGAATGTCACGAGTAGAGGCAGCTaGGACACAGAATCTCGCCATGGTCTTGTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SEASWNVTSRGS*DTESRHGLVLP Trigger: GGGAAGGACAAGACCATGGCGAGATTCTGTGTCCAAGCTGCCTCTACTCGTGACATTCCAAGATGCCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR TCA 90 bp | TTACAAAACTTTGGATACAGCAGGTTGGTAGGGACCTCCCATTGGATGCTATTAGGACCCTGGTGCCACTaGGCAGGAGGCCGAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQNFGYSRLVGTSHWMLLGPWCH*AGGRVA Trigger: TGCTACTCGGCCTCCTGCTCAGTGGCACCAGGGTCC...TAATAGCATCCAATGGGAGGTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR TCA 90 bp | AATTGTTGTATCCGTTCTGCTCAAGTGTCCTCACACAAGCGTTATCCAGTTGACGTGCTTGTTCATAGCTaGGCGGGCATCTGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NCCIRSAQVSSHKRYPVDVLVHS*AGIWPV Trigger: AACAGGCCAGATGCCCGCTCAGCTATGAACAAGCAC...GTCAACTGGATAACGCTTGTGTGAGGACACTTGAGCAGAACGGATACAACAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
||
| CDS-3UTR GCA 90 bp | TTACAAAACTTTGGATACAGCAGGTTGGTAGGGACCTCCCATTGGATGCTATTATCTTCACCTCGCAGCTaGCGGACAACCCGTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: LQNFGYSRLVGTSHWMLLSSPRS*RTTRGI Trigger: AATGCCACGGGTTGTCCGGCAGCTGCGAGGTGAAGA...TAATAGCATCCAATGGGAGGTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CCA 90 bp | CCTTTTACAAGTGGGAAGAAGGGCTTGTTAAGGATCTCTTGTCTTTCTGGTTACCAGGGACCACCAAATTaGGTAGCCAGCGAGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: PFTSGKKGLLRISCLSGYQGPPN*VASEDP Trigger: AGGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTG...GTAACCAGAAAGACAAGAGATCCTTAACAAGCCCTTCTTCCCACTTGTAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CCA 90 bp | CAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTTGGTAGGGACCAGCCATCGATGCCGTaGGAGGTGACATTGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QQLLQLFTKLWIQQVGRDQPSMP*EVTLQV Trigger: GACTTGCAATGTCACCTCCCACGGCATCGATGGCTG...GTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR GCA 90 bp | CAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTTGGTAGGGACCAGCTTCACACCTTCTaGTACGCTGGGCATGATCTC | + |
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Preference number: 4 (lower is better) Translates to: QQLLQLFTKLWIQQVGRDQLHTF*YAGHDL Trigger: GAGATCATGCCCAGCGTAGCAGAAGGTGTGAAGCTG...GTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS TCA 90 bp | AGTCACAGCCGCAGATGGTGGAGGTTCCCTCAGCGCAGGAGCGTGTaGCTGCGAAGGCGACACCAGCCGAGGCGATGGCATGCACGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SHSRRWWRFPQRRSV*LRRRHQPRRWHARR Trigger: CCTTCGTGCATGCCATCGCCTCGGCTGGTGTCGCCTTCGCAGTCACACGCTCCTGCGCTGAGGGAACCTCCACCATCTGCGGCTGTGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CAA 90 bp | CATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTTTCTCCGTCCTCGTGTaGTGGCCCCGGCCACAGCAC | + |
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Preference number: 5 (lower is better) Translates to: HHASGTELGAASIRCLPLFSVLV*WPRPQH Trigger: GTGCTGTGGCCGGGGCCACAACACGAGGACGGAGAA...AAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CAA 90 bp | GCTTGGCAAGCCAACTGCACAACAGGAAAGAAGTGGCTGACCCCTCGTCAAGCCCCAGGGACCACCAAATaGGGTAGCCAGCGAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: AWQANCTTGKKWLTPRQAPGTTK*GSQRGP Trigger: GGGTCCTCGCTGGCTACCCAATTTGGTGGTCCCTGG...GGCTTGACGAGGGGTCAGCCACTTCTTTCCTGTTGTGCAGTTGGCTTGCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CAA 90 bp | AAAGAAGCCGCCCGTCCGTCCGAGGCCGGCTGGGTCCAGGTCGTTTATCACATGCTGTCGTACTTGTCCTaGAGGAAGTCGCCAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: KEAARPSEAGWVQVVYHMLSYLS*RKSPMA Trigger: TGCCATTGGCGACTTCCTCAAGGACAAGTACGACAG...CATGTGATAAACGACCTGGACCCAGCCGGCCTCGGACGGACGGGCGGCTTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CAA 90 bp | CATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTGCTTCATTGTTGTGCTaGTTCATAGCTGAGCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: HHASGTELGAASIRCLPLASLLC*FIAERA Trigger: TGCCCGCTCAGCTATGAACAAGCACAACAATGAAGC...AAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CAA 90 bp | CATCATGCGTCGGGAACAGAGCTGGGAGCTGCCTCCATTCGCTGCTTGCCTCTTGTTCGGCCTGCTTCATaGTTGTGCTTGTTCATAGCT | + |
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Preference number: 5 (lower is better) Translates to: HHASGTELGAASIRCLPLVRPAS*LCLFIA Trigger: AGCTATGAACAAGCACAACAATGAAGCAGGCCGAAC...AAGAGGCAAGCAGCGAATGGAGGCAGCTCCCAGCTCTGTTCCCGACGCATGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CAA 90 bp | CAACAACTTCTACAACTTTTTACAAAACTTTGGATACAGCAGGTTGGTAGGGACCCGTGGGAGGTGACATaGCAAGTCCGGTCCCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: QQLLQLFTKLWIQQVGRDPWEVT*QVRSLV Trigger: TACCAGGGACCGGACTTGCAATGTCACCTCCCACGG...GTCCCTACCAACCTGCTGTATCCAAAGTTTTGTAAAAAGTTGTAGAAGTTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS-3UTR CAA 90 bp | CACAAGCGTTATCCAGTTGACTTGATTTCCAACTTCTGGAAGGAGAGATGGGAAGATGCGAATACACTCTaGGCAGCTGACATAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HKRYPVDLISNFWKERWEDANTL*AADIAA Trigger: TGCTGCTATGTCAGCTGCCAAGAGTGTATTCGCATC...TTCCCATCTCTCCTTCCAGAAGTTGGAAATCAAGTCAACTGGATAACGCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS TCA 72 bp | ACCAAATTGGGTAGCCAGCGAGGACCCTGGTGCCACTaGGCAGGAGGCCGAGTAGCAGCCCGAGCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TKLGSQRGPWCH*AGGRVAARAGG Trigger: CCCACCTGCTCGGGCTGCTACTCGGCCTCCTGCTCAGTGGCACCAGGGTCCTCGCTGGCTACCCAATTTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS TCA 72 bp | CGCAGATGGTGGAGGTTCCCTCAGCGCAGGAGCGTGTaGCTGCGAAGGCGACACCAGCCGAGGCGATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RRWWRFPQRRSV*LRRRHQPRRWH Trigger: ATGCCATCGCCTCGGCTGGTGTCGCCTTCGCAGTCACACGCTCCTGCGCTGAGGGAACCTCCACCATCTGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS GCA 72 bp | GATGGTGGAGGTTCCCTCAGCGCAGGAGCGTGTGACTaGGAAGGCGACACCAGCCGAGGCGATGGCATGCAC | + |
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Preference number: 6 (lower is better) Translates to: DGGGSLSAGACD*EGDTSRGDGMH Trigger: GTGCATGCCATCGCCTCGGCTGGTGTCGCCTTCGCAGTCACACGCTCCTGCGCTGAGGGAACCTCCACCATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS TCA 72 bp | CCGCCCCACTTCCAGCCTTCTCCAGGTGGCCCCTTATaGTGTGAGTCACAGCCGCAGATGGTGGAGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PPHFQPSPGGPL*CESQPQMVEVP Trigger: GGGAACCTCCACCATCTGCGGCTGTGACTCACATCATAAGGGGCCACCTGGAGAAGGCTGGAAGTGGGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS TCA 72 bp | CCACTTCCAGCCTTCTCCAGGTGGCCCCTTATGATGTaGGTCACAGCCGCAGATGGTGGAGGTTCCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLPAFSRWPLMM*VTAADGGGSLS Trigger: GCTGAGGGAACCTCCACCATCTGCGGCTGTGACTCACATCATAAGGGGCCACCTGGAGAAGGCTGGAAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS GCA 72 bp | CAGCTGCCGGACAACCCGTGGCATTTACACTTTAGGTaGATGTGGTCCAGGATGGTCGTTCGGCCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QLPDNPWHLHFR*MWSRMVVRPAS Trigger: TGAAGCAGGCCGAACGACCATCCTGGACCACATGCACCTAAAGTGTAAATGCCACGGGTTGTCCGGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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| CDS GCA 72 bp | TGGTCCAGGATGGTCGTTCGGCCTGCTTCATTGTTGTaGTTGTTCATAGCTGAGCGGGCATCTGGCCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: WSRMVVRPASLL*LFIAERASGLF Trigger: GAACAGGCCAGATGCCCGCTCAGCTATGAACAAGCACAACAATGAAGCAGGCCGAACGACCATCCTGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000127.6 |
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