Pregenerated sensors for WNT2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027840Ensembl transcript IDs: ENSMUST00000029429.6
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTTCCTAGTATACACTGATCCTCATGGAACCCCTGAGATCAGGTaGGCTCACCCTTCCCATGAGTTACCTCCCTTCCTACCGAATCTC | + |
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Preference number: 1 (lower is better) Translates to: AFLVYTDPHGTPEIR*AHPSHELPPFLPNL Trigger: GAGATTCGGTAGGAAGGGAGGTAACTCATGGGAAGGGTGAGCGCACCTGATCTCAGGGGTTCCATGAGGATCAGTGTATACTAGGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 90 bp | CAGCCTCCTGCTGCCTGGGCAGAAAGAGGTTGCTCCACAAACATCTaGGAGTACGATTGGATGAAGAGGAACCTGAGAAGAGAGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: QPPAAWAERGCSTNI*EYDWMKRNLRRERG Trigger: TCCTCTCTCTCTTCTCAGGTTCCTCTTCATCCAATCGTACTCTCAGATGTTTGTGGAGCAACCTCTTTCTGCCCAGGCAGCAGGAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR GCA 90 bp | AGAGTAGCATCAAACACGGAAGCTACCTCCAGGTTCCCTTCCTGTTaGATACCCAAAGAGGATCAGAAGTCAGTGCAAGCAAAGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RVASNTEATSRFPSC*IPKEDQKSVQAKGR Trigger: CCTCCCCTTTGCTTGCACTGACTTCTGATCCTCTTTGGGTATGCAACAGGAAGGGAACCTGGAGGTAGCTTCCGTGTTTGATGCTACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 90 bp | GCAAAGGGGAGGATGAGCCTTGACTTAGTGCAACTCAAATCACTCTaGAGACAGACCTCTCCTACTCTCCCTTCAAACCTCCAGATGGAC | + |
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Preference number: 1 (lower is better) Translates to: AKGRMSLDLVQLKSL*RQTSPTLPSNLQMD Trigger: GTCCATCTGGAGGTTTGAAGGGAGAGTAGGAGAGGTCTGTCTTCAGAGTGATTTGAGTTGCACTAAGTCAAGGCTCATCCTCCCCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 90 bp | CCAGACAGCCCTAAATCAGAAGGTCCCAGAGAAGCAGGAAGTACTTaGCCAGTGAGAGTGTTGATGACGTCTATCAGTCGGCTAGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: PDSPKSEGPREAGST*PVRVLMTSISRLEF Trigger: AAACTCTAGCCGACTGATAGACGTCATCAACACTCTCACTGGTCAAGTACTTCCTGCTTCTCTGGGACCTTCTGATTTAGGGCTGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 90 bp | CAAAGAGGATCAGAAGTCAGTGCAAGCAAAGGGGAGGATGAGCCTTaGCTTAGTGCAACTCAAATCACTCTGAAGACAGACCTCTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: QRGSEVSASKGEDEP*LSATQITLKTDLSY Trigger: GTAGGAGAGGTCTGTCTTCAGAGTGATTTGAGTTGCACTAAGTCAAGGCTCATCCTCCCCTTTGCTTGCACTGACTTCTGATCCTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR GCA 90 bp | TTTTGTTCCTACTTCAAAGCTGAAGATCCTCAAGAACTAGCAAAATaGGAGATCTCTGCCTTCCTAGTATACACTGATCCTCATGGAACC | + |
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Preference number: 1 (lower is better) Translates to: FCSYFKAEDPQELAK*EISAFLVYTDPHGT Trigger: GGTTCCATGAGGATCAGTGTATACTAGGAAGGCAGAGATCTCGCATTTTGCTAGTTCTTGAGGATCTTCAGCTTTGAAGTAGGAACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 90 bp | CCTATCAACACGTCCCTAGGGCTAAGGAACCAGGCGGCCGGGACATaGGGGTCCCTCCGGATCACTCTCCAGGTCCGTGACAGAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PINTSLGLRNQAAGT*GSLRITLQVRDRSH Trigger: ATGGCTTCTGTCACGGACCTGGAGAGTGATCCGGAGGGACCCCAATGTCCCGGCCGCCTGGTTCCTTAGCCCTAGGGACGTGTTGATAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCTCCGGATCACTCTCCAGGTCCGTGACAGAAGCCATAGCAGCCCAGGATAGAGGAAGGTGCGCATaGAAGGGTCTTGTGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GPSGSLSRSVTEAIAAQDRGRCA*KGLVLL Trigger: CAAAAGCACAAGACCCTTGCATGCGCACCTTCCTCT...ATCCTGGGCTGCTATGGCTTCTGTCACGGACCTGGAGAGTGATCCGGAGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTAGGGTCTTGTGCTTTTaGGTCAGAGGCTTGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: KVWNPHVTVPALFEGSTPRVLCF*VRGLKW Trigger: CCACTTCAAGCCTCTGACTCAAAAGCACAAGACCCT...AGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTCTTCAAACCTCCAGATaGACCATCAGGGAGTCACTC | + |
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Preference number: 2 (lower is better) Translates to: KVWNPHVTVPALFEGSTPLQTSR*TIRESL Trigger: GAGTGACTCCCTGATGGTCCATCTGGAGGTTTGAAG...AGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 90 bp | CAGAGTAGCATCAAACACGGAAGCTACCTCCAGGTTCCCTTCCTGTaGCATACCCAAAGAGGATCAGAAGTCAGTGCAAGCAAAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QSSIKHGSYLQVPFL*HTQRGSEVSASKGE Trigger: CTCCCCTTTGCTTGCACTGACTTCTGATCCTCTTTGGGTATGCAACAGGAAGGGAACCTGGAGGTAGCTTCCGTGTTTGATGCTACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTAAGAATTTGACCCACTGCAAGCTGCCTCACTCTGAACAGGCAGCCAGTTTTGAGTCAGAGGCTTaGAGTGGAGGGAAGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: PGKNLTHCKLPHSEQAASFESEA*SGGKNE Trigger: CTCATTCTTCCCTCCACTTCAAGCCTCTGACTCAAA...ACTGGCTGCCTGTTCAGAGTGAGGCAGCTTGCAGTGGGTCAAATTCTTACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTGTGTACCCTCGTTAGGCAACGGATCTGTAGAGCATTGTaGTTTTCCTCCTCACCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LCLLSLKAPLLCTLVRQRICRAL*FSSSPN Trigger: GTTTGGTGAGGAGGAAAATCACAATGCTCTACAGAT...CCGTTGCCTAACGAGGGTACACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTGTGTACCCTCGTTAGGCAACGGCTCTCTCTCTATAGCTaGTGCCTTTTGTTCCTACTT | + |
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Preference number: 2 (lower is better) Translates to: LCLLSLKAPLLCTLVRQRLSLYS*CLLFLL Trigger: AAGTAGGAACAAAAGGCAGCAGCTATAGAGAGAGAG...CCGTTGCCTAACGAGGGTACACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 90 bp | AGGATTGAGGGTAGAGGAAGGTGCGCATGCAAGGGTCTTGTGCTTTaGAGTCAGAGGCTTGAAGTGGAGGGAAGAATGAGGTTTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RIEGRGRCACKGLVL*SQRLEVEGRMRFLC Trigger: ACACAGAAACCTCATTCTTCCCTCCACTTCAAGCCTCTGACTCAAAAGCACAAGACCCTTGCATGCGCACCTTCCTCTACCCTCAATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTGTGTTCCTACTTCAAAGCTaGAGATCCTCAAGAACTAGC | + |
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Preference number: 2 (lower is better) Translates to: VWNPHVTVPALFEGSTPVFLLQS*RSSRTS Trigger: GCTAGTTCTTGAGGATCTTCAGCTTTGAAGTAGGAA...CACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 90 bp | TGCCTGGGCAGAAAGAGGTTGCTCCACAAACATCTGAGAGTACGATaGGATGAAGAGGAACCTGAGAAGAGAGAGAGGAGCTATATCCAG | + |
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Preference number: 2 (lower is better) Translates to: CLGRKRLLHKHLRVR*DEEEPEKRERSYIQ Trigger: CTGGATATAGCTCCTCTCTCTCTTCTCAGGTTCCTCTTCATCCAATCGTACTCTCAGATGTTTGTGGAGCAACCTCTTTCTGCCCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTGATTTGCTGGGTAAATaGGAAAGGCCTTATAGGATG | + |
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Preference number: 2 (lower is better) Translates to: KVWNPHVTVPALFEGSTPDLLGK*ERPYRM Trigger: CATCCTATAAGGCCTTTCTCATTTACCCAGCAAATC...AGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGAGGAACCTGAGAAGAGAGAGAGGAGCTATATCCAGAATTCCTTGTGAAACCCCTGAGATCAGGTaGGCTCACCCTTCCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: MKRNLRRERGAISRIPCETPEIR*AHPSHE Trigger: CTCATGGGAAGGGTGAGCGCACCTGATCTCAGGGGT...TTCACAAGGAATTCTGGATATAGCTCCTCTCTCTCTTCTCAGGTTCCTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGAGCTATATCCAGAATTCCTTGTGAAAGCCTTTGAATCTAGTCTGTTGGGGGAGGATGAGCCTTaGCTTAGTGCAACTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: REELYPEFLVKAFESSLLGEDEP*LSATQI Trigger: GATTTGAGTTGCACTAAGTCAAGGCTCATCCTCCCC...CAACAGACTAGATTCAAAGGCTTTCACAAGGAATTCTGGATATAGCTCCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR CAA 90 bp | GCGCTCACCCTTCCCATGAGTTACCTCCCTTCCTACCGAATCTCCGGAATAGTGCATAGCAGCCCAGGATaGAGGGTAGAGGAAGGTGCG | + |
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Preference number: 3 (lower is better) Translates to: ALTLPMSYLPSYRISGIVHSSPG*RVEEGA Trigger: CGCACCTTCCTCTACCCTCAATCCTGGGCTGCTATG...CACTATTCCGGAGATTCGGTAGGAAGGGAGGTAACTCATGGGAAGGGTGAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 72 bp | GGTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTaGAGGCTCCACTCCTGTGTACCCTCGTTAGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: GLEPPCHCACSL*RLHSCVPSLGN Trigger: GTTGCCTAACGAGGGTACACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 72 bp | ATCCTGTTCCGGGCCTCTAATGGCCTGGTAAGAATTTaGCCCACTGCAAGCTGCCTCACTCTGAACAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ILFRASNGLVRI*PTASCLTLNRQ Trigger: CTGCCTGTTCAGAGTGAGGCAGCTTGCAGTGGGTCAAATTCTTACCAGGCCATTAGAGGCCCGGAACAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR GCA 72 bp | ACTAGACCATCAAGGTTTGGAACCCCCATGTCACTGTaGCTGCTCTCTTTGAAGGCTCCACTCCTGTGTACC | + |
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Preference number: 3 (lower is better) Translates to: TRPSRFGTPMSL*LLSLKAPLLCT Trigger: GGTACACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAACCTTGATGGTCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAAATGCGAGATCTCTGCCTTCCTAGTATACACTGATCCTCATGGAACCCCTAAGGGTCTTGTGCTTTaGAGTCAGAGGCTTGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: AKCEISAFLVYTDPHGTPKGLVL*SQRLEV Trigger: CACTTCAAGCCTCTGACTCAAAAGCACAAGACCCTT...AGGGGTTCCATGAGGATCAGTGTATACTAGGAAGGCAGAGATCTCGCATTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGGAGCTATATCCAGAATTCCTTGTGAAAGCCTTTGAATCTAGTCTGTTGCTGTGCCTGCTCTCTTaGAAGGCTCCACTCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: REELYPEFLVKAFESSLLLCLLS*KAPLLC Trigger: ACACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAG...CAACAGACTAGATTCAAAGGCTTTCACAAGGAATTCTGGATATAGCTCCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 72 bp | AGGATGAGCCTTGACTTAGTGCAACTCAAATCACTCTaGAGACAGACCTCTCCTACTCTCCCTTCAAACCTC | + |
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Preference number: 3 (lower is better) Translates to: RMSLDLVQLKSL*RQTSPTLPSNL Trigger: GAGGTTTGAAGGGAGAGTAGGAGAGGTCTGTCTTCAGAGTGATTTGAGTTGCACTAAGTCAAGGCTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CCA 72 bp | GAGAGTGTTGATGACGTCTATCAGTCGGCTAGAGTTTaGGGCACAGTTAGATCTCAGTTTCACCCTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: ESVDDVYQSARV*GTVRSQFHPHF Trigger: AAAGTGAGGGTGAAACTGAGATCTAACTGTGCCCCAAACTCTAGCCGACTGATAGACGTCATCAACACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR-3UTR CAA 90 bp | ATGAAGAGGAACCTGAGAAGAGAGAGAGGAGCTATATCCAGAATTCCTTGTGAACTAGACCATCAAGGTTaGGAACCCCCATGTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: MKRNLRRERGAISRIPCELDHQG*EPPCHC Trigger: ACAGTGACATGGGGGTTCCAAACCTTGATGGTCTAG...TTCACAAGGAATTCTGGATATAGCTCCTCTCTCTCTTCTCAGGTTCCTCTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 72 bp | GAGAAGAGAGAGAGGAGCTATATCCAGAATTCCTTGTaGAAGCCTTTGAATCTAGTCTGTTGTCTGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: EKRERSYIQNSL*KPLNLVCCLPR Trigger: TCTGGGCAGACAACAGACTAGATTCAAAGGCTTTCACAAGGAATTCTGGATATAGCTCCTCTCTCTCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR TCA 72 bp | AGGGAGGCACAGAGAATGTGTATCTGTAGAGCATTGTaGTTTTCCTCCTCACCAAACCACTACTTTATAAGC | + |
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Preference number: 3 (lower is better) Translates to: REAQRMCICRAL*FSSSPNHYFIS Trigger: GCTTATAAAGTAGTGGTTTGGTGAGGAGGAAAATCACAATGCTCTACAGATACACATTCTCTGTGCCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR GCA 72 bp | TACTTCAAAGCTGAAGATCCTCAAGAACTAGCAAAATaGGAGATCTCTGCCTTCCTAGTATACACTGATCCT | + |
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Preference number: 3 (lower is better) Translates to: YFKAEDPQELAK*EISAFLVYTDP Trigger: AGGATCAGTGTATACTAGGAAGGCAGAGATCTCGCATTTTGCTAGTTCTTGAGGATCTTCAGCTTTGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | ACGTCCCTAGGGCTAAGGAACCAGGCGGCCGGGACATaGGGGTCCCTCCGGATCACTCTCCAGGTCCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TSLGLRNQAAGT*GSLRITLQVRD Trigger: GTCACGGACCTGGAGAGTGATCCGGAGGGACCCCAATGTCCCGGCCGCCTGGTTCCTTAGCCCTAGGGACGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CCA 90 bp | CTAGGGCTAAGGAACCAGGCGGCCGGGACATTGGGGTCCCTCCGGATCACTCTCACGCTCAGCTCACCCTaGCTGCAGGCCCGAGTGATA | + |
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Preference number: 4 (lower is better) Translates to: LGLRNQAAGTLGSLRITLTLSSP*LQARVI Trigger: TATCACTCGGGCCTGCAGCCAGGGTGAGCTGAGCGT...GAGAGTGATCCGGAGGGACCCCAATGTCCCGGCCGCCTGGTTCCTTAGCCCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | CTAGGGCTAAGGAACCAGGCGGCCGGGACATTGGGGTCCCTCCGGATCACTCTCTGTGTGGCCGTCACCTaGACAGCCCCATCATATCGC | + |
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Preference number: 4 (lower is better) Translates to: LGLRNQAAGTLGSLRITLCVAVT*TAPSYR Trigger: GCGATATGATGGGGCTGTGCAGGTGACGGCCACACA...GAGAGTGATCCGGAGGGACCCCAATGTCCCGGCCGCCTGGTTCCTTAGCCCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | GGTCCCTCCGGATCACTCTCCAGGTCCGTGACAGAAGCCATAGCAGCCCAGGATGTGCTCTCCAGCAGGTaGGCAGAGTACAGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPSGSLSRSVTEAIAAQDVLSSR*AEYRSH Trigger: GTGGCTCCTGTACTCTGCGCACCTGCTGGAGAGCAC...ATCCTGGGCTGCTATGGCTTCTGTCACGGACCTGGAGAGTGATCCGGAGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | GGTCCCTCCGGATCACTCTCCAGGTCCGTGACAGAAGCCATAGCAGCCCAGGATTGTTTCTGCACTCCTTaGACCGCACAGCACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: GPSGSLSRSVTEAIAAQDCFCTP*TAQHST Trigger: GGTGCTGTGCTGTGCGGTGCAAGGAGTGCAGAAACA...ATCCTGGGCTGCTATGGCTTCTGTCACGGACCTGGAGAGTGATCCGGAGGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CCA 90 bp | AGGTGCGCATGCAAGGGTCTTGTGCTTTTGAGTCAGAGGCTTGAAGTGGAGGGATGGCCCCATCCTGTGTaGCCGTCACCTGCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RCACKGLVLLSQRLEVEGWPHPV*PSPAQP Trigger: GGGCTGTGCAGGTGACGGCCACACAGGATGGGGCCA...TCCCTCCACTTCAAGCCTCTGACTCAAAAGCACAAGACCCTTGCATGCGCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR TCA 90 bp | GTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTGTGTCAAAGTCCCCTCGTTaGTCATGGTGCCGACCGCGG | + |
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Preference number: 4 (lower is better) Translates to: VWNPHVTVPALFEGSTPVSKSPR*SWCRPR Trigger: CCGCGGTCGGCACCATGATCAACGAGGGGACTTTGA...CACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | CTCCAGGTCCGTGACAGAAGCCATAGCAGCCCAGGATaGAGGGTAGAGGAAGGTGCGCATGCAAGGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LQVRDRSHSSPG*RVEEGAHARVL Trigger: CAAGACCCTTGCATGCGCACCTTCCTCTACCCTCAATCCTGGGCTGCTATGGCTTCTGTCACGGACCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | GTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTGTGCTGGTCCAGCCACTCTaGCTTCTTAGGGGCCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: VWNPHVTVPALFEGSTPVLVQPL*LLRGLA Trigger: TGCAAGGCCCCTAAGAAGGCAGAGTGGCTGGACCAG...CACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTAAGAATTTGACCCACTGCAAGCTGCCTCACTCTGAACAGGCAGCCAGTGGCACCCTCACCTACTaGGCGCATGATGTCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PGKNLTHCKLPHSEQAASGTLTY*AHDVWV Trigger: TACCCAGACATCATGCGCTCAGTAGGTGAGGGTGCC...ACTGGCTGCCTGTTCAGAGTGAGGCAGCTTGCAGTGGGTCAAATTCTTACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | AGGTGCGCATGCAAGGGTCTTGTGCTTTTGAGTCAGAGGCTTGAAGTGGAGGGAATAGCCCTGGCGCGCTaGTGTGAAATTGGCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: RCACKGLVLLSQRLEVEGIALAR*CEIGPI Trigger: GATGGGGCCAATTTCACAGCAGCGCGCCAGGGCTAT...TCCCTCCACTTCAAGCCTCTGACTCAAAAGCACAAGACCCTTGCATGCGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | CCCACCCCAGCCTCCTGCTGCCTGGGCAGAAAGAGGTaGCTCCACAAACATCTGAGAGTACGATTGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: PTPASCCLGRKR*LHKHLRVRLDE Trigger: TTCATCCAATCGTACTCTCAGATGTTTGTGGAGCAACCTCTTTCTGCCCAGGCAGCAGGAGGCTGGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | GTTTGGAACCCCCATGTCACTGTGCCTGCTCTCTTTGAAGGCTCCACTCCTGTGTATATGGGTCACAGCTaGACACGCTCAGCTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: VWNPHVTVPALFEGSTPVYMGHS*TRSAHP Trigger: AGGGTGAGCTGAGCGTGTGCAGCTGTGACCCATATA...CACAGGAGTGGAGCCTTCAAAGAGAGCAGGCACAGTGACATGGGGGTTCCAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | GCGCTCACCCTTCCCATGAGTTACCTCCCTTCCTACCGAATCTCCGGAATAGTGTCACACCGTGACACTTaGACTCCAGCTTCAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: ALTLPMSYLPSYRISGIVSHRDT*TPASGI Trigger: GATTCCTGAAGCTGGAGTGCAAGTGTCACGGTGTGA...CACTATTCCGGAGATTCGGTAGGAAGGGAGGTAACTCATGGGAAGGGTGAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CCA 90 bp | GCAAAATGCGAGATCTCTGCCTTCCTAGTATACACTGATCCTCATGGAACCCCTCCGACCGCGGGTATATaGGTCACAGCTGCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKCEISAFLVYTDPHGTPPTAGI*VTAAHA Trigger: AGCGTGTGCAGCTGTGACCCATATACCCGCGGTCGG...AGGGGTTCCATGAGGATCAGTGTATACTAGGAAGGCAGAGATCTCGCATTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CCA 90 bp | GTGAAAGCCTTTGAATCTAGTCTGTTGTCTGCCCAGACAGCCCTAAATCAGAAGCAAGATCAGTCCGGGTaGCGTGGCGATAGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKAFESSLLSAQTALNQKQDQSG*RGDSPG Trigger: GCCAGGGCTATCGCCACGCCACCCGGACTGATCTTG...CTTCTGATTTAGGGCTGTCTGGGCAGACAACAGACTAGATTCAAAGGCTTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | GGTAGAGGAAGGTGCGCATGCAAGGGTCTTGTGCTTTaGAGTCAGAGGCTTGAAGTGGAGGGAAGAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRGRCACKGLVL*SQRLEVEGRMR Trigger: CCTCATTCTTCCCTCCACTTCAAGCCTCTGACTCAAAAGCACAAGACCCTTGCATGCGCACCTTCCTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CCA 90 bp | GAGATCTCTGCCTTCCTAGTATACACTGATCCTCATGGAACCCCTGAGATCAGGAATTTGCACTCACACTaGGTGACGCGGGTGACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EISAFLVYTDPHGTPEIRNLHSH*VTRVTR Trigger: TCGGGTCACCCGCGTCACCCAGTGTGAGTGCAAATT...CCTGATCTCAGGGGTTCCATGAGGATCAGTGTATACTAGGAAGGCAGAGATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR GCA 90 bp | TACCTCCAGGTTCCCTTCCTGTTGCATACCCAAAGAGGATCAGAAGTCAGTGCACATCCACAGTGTTTCTaGACTCCTTGCACCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YLQVPFLLHTQRGSEVSAHPQCF*TPCTAQ Trigger: CTGTGCGGTGCAAGGAGTGCAGAAACACTGTGGATG...TGCACTGACTTCTGATCCTCTTTGGGTATGCAACAGGAAGGGAACCTGGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CCA 90 bp | TACCTCCAGGTTCCCTTCCTGTTGCATACCCAAAGAGGATCAGAAGTCAGTGCAACAGCACAGCACCAGTaGAATTTGCACTCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLQVPFLLHTQRGSEVSATAQHQ*NLHSHW Trigger: CCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGT...TGCACTGACTTCTGATCCTCTTTGGGTATGCAACAGGAAGGGAACCTGGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | ATCAAACACGGAAGCTACCTCCAGGTTCCCTTCCTGTaGCATACCCAAAGAGGATCAGAAGTCAGTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKHGSYLQVPFL*HTQRGSEVSAS Trigger: GCTTGCACTGACTTCTGATCCTCTTTGGGTATGCAACAGGAAGGGAACCTGGAGGTAGCTTCCGTGTTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | ATTTGCTGGGTAAATGAGAAAGGCCTTATAGGATGTTaGCCACCTCGGCTCCAGCACCAGCTCTCTCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ICWVNEKGLIGC*PPRLQHQLSLY Trigger: ATAGAGAGAGAGCTGGTGCTGGAGCCGAGGTGGCAAACATCCTATAAGGCCTTTCTCATTTACCCAGCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | CCAGAATTCCTTGTGAAAGCCTTTGAATCTAGTCTGTaGTCTGCCCAGACAGCCCTAAATCAGAAGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEFLVKAFESSL*SAQTALNQKVP Trigger: TGGGACCTTCTGATTTAGGGCTGTCTGGGCAGACAACAGACTAGATTCAAAGGCTTTCACAAGGAATTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| 3UTR CAA 72 bp | AGAAAGAGGTTGCTCCACAAACATCTGAGAGTACGATaGGATGAAGAGGAACCTGAGAAGAGAGAGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKRLLHKHLRVR*DEEEPEKRERS Trigger: GCTCCTCTCTCTCTTCTCAGGTTCCTCTTCATCCAATCGTACTCTCAGATGTTTGTGGAGCAACCTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CCA 90 bp | AGAGAGGAGCTATATCCAGAATTCCTTGTGAAAGCCTTTGAATCTAGTCTGTTGGGGGCCTTGCATGTGTaGACATCCACAGTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: REELYPEFLVKAFESSLLGALHV*TSTVFL Trigger: CAGAAACACTGTGGATGTCCACACATGCAAGGCCCC...CAACAGACTAGATTCAAAGGCTTTCACAAGGAATTCTGGATATAGCTCCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS TCA 90 bp | CAAGATCAGTCCGGGTGGCGTGGCGATAGCCCTGGCGCGCTGCTGTaGAATTGGCCCCATCCTGTGTGGCCGTCACCTGCACAGCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QDQSGWRGDSPGALL*NWPHPVWPSPAQPH Trigger: ATGGGGCTGTGCAGGTGACGGCCACACAGGATGGGGCCAATTTCACAGCAGCGCGCCAGGGCTATCGCCACGCCACCCGGACTGATCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CCA 90 bp | CGACCGCGGGTATATGGGTCACAGCTGCACACGCTCAGCTCACCCTaGCTGCAGGCCCGAGTGATAGCGTGGACCACTCCTGCTGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPRVYGSQLHTLSSP*LQARVIAWTTPADE Trigger: CTCGTCAGCAGGAGTGGTCCACGCTATCACTCGGGCCTGCAGCCAGGGTGAGCTGAGCGTGTGCAGCTGTGACCCATATACCCGCGGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS GCA 90 bp | GTAGACAAGATCAGTCCGGGTGGCGTGGCGATAGCCCTGGCGCGCTaGTGTGAAATTGGCCCCATCCTGTGTGGCCGTCACCTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDKISPGGVAIALAR*CEIGPILCGRHLHS Trigger: GCTGTGCAGGTGACGGCCACACAGGATGGGGCCAATTTCACAGCAGCGCGCCAGGGCTATCGCCACGCCACCCGGACTGATCTTGTCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CCA 90 bp | CCAGTCAAAGTCCCCTCGTTGATCATGGTGCCGACCGCGGGTATATaGGTCACAGCTGCACACGCTCAGCTCACCCTGGCTGCAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVKVPSLIMVPTAGI*VTAAHAQLTLAAGP Trigger: CGGGCCTGCAGCCAGGGTGAGCTGAGCGTGTGCAGCTGTGACCCATATACCCGCGGTCGGCACCATGATCAACGAGGGGACTTTGACTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS TCA 90 bp | GGCACTCTCGGATCCATTCCCGGGCACCCTCACCTACTGAGCGCATaGTGTCTGGGTAGCGTTGACACAACTGCCGCTGCCGGCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLGSIPGHPHLLSA*CLGSVDTTAAAGSP Trigger: TGGTGAGCCGGCAGCGGCAGTTGTGTCAACGCTACCCAGACATCATGCGCTCAGTAGGTGAGGGTGCCCGGGAATGGATCCGAGAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS TCA 90 bp | CTGGTGCTGGCACTCTCGGATCCATTCCCGGGCACCCTCACCTACTaGGCGCATGATGTCTGGGTAGCGTTGACACAACTGCCGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LVLALSDPFPGTLTY*AHDVWVALTQLPLP Trigger: CGGCAGCGGCAGTTGTGTCAACGCTACCCAGACATCATGCGCTCAGTAGGTGAGGGTGCCCGGGAATGGATCCGAGAGTGCCAGCACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CCA 90 bp | TCCACAGTGTTTCTGCACTCCTTGCACCGCACAGCACAGCACCAGTaGAATTTGCACTCACACTGGGTGACGCGGGTGACCCGAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: STVFLHSLHRTAQHQ*NLHSHWVTRVTRVV Trigger: CACAACTCGGGTCACCCGCGTCACCCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGTGCGGTGCAAGGAGTGCAGAAACACTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CAA 90 bp | AGGTGCGCATGCAAGGGTCTTGTGCTTTTGAGTCAGAGGCTTGAAGTGGAGGGAACCAGACCGGGGATGTaGTCACAGATCACTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCACKGLVLLSQRLEVEGTRPGM*SQITRA Trigger: AGCCCGAGTGATCTGTGACAACATCCCCGGTCTGGT...TCCCTCCACTTCAAGCCTCTGACTCAAAAGCACAAGACCCTTGCATGCGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CAA 90 bp | GCAAAATGCGAGATCTCTGCCTTCCTAGTATACACTGATCCTCATGGAACCCCTCGCGCTGCTGTGAAATaGGCCCCATCCTGTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKCEISAFLVYTDPHGTPRAAVK*APSCVA Trigger: GGCCACACAGGATGGGGCCAATTTCACAGCAGCGCG...AGGGGTTCCATGAGGATCAGTGTATACTAGGAAGGCAGAGATCTCGCATTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CAA 90 bp | AGGTGCGCATGCAAGGGTCTTGTGCTTTTGAGTCAGAGGCTTGAAGTGGAGGGAGCCTTCTTAGGGGCCTaGCATGTGTGGACATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RCACKGLVLLSQRLEVEGAFLGA*HVWTST Trigger: TGTGGATGTCCACACATGCAAGGCCCCTAAGAAGGC...TCCCTCCACTTCAAGCCTCTGACTCAAAAGCACAAGACCCTTGCATGCGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CAA 90 bp | GCAAAATGCGAGATCTCTGCCTTCCTAGTATACACTGATCCTCATGGAACCCCTGATGTCTGGGTAGCGTaGACACAACTGCCGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AKCEISAFLVYTDPHGTPDVWVA*TQLPLP Trigger: CGGCAGCGGCAGTTGTGTCAACGCTACCCAGACATC...AGGGGTTCCATGAGGATCAGTGTATACTAGGAAGGCAGAGATCTCGCATTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CAA 90 bp | GAGATCTCTGCCTTCCTAGTATACACTGATCCTCATGGAACCCCTGAGATCAGGCGACCACAGCGGTTGTaGTGTAAGTTCATGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EISAFLVYTDPHGTPEIRRPQRL*CKFMRA Trigger: GGCCCTCATGAACTTACACAACAACCGCTGTGGTCG...CCTGATCTCAGGGGTTCCATGAGGATCAGTGTATACTAGGAAGGCAGAGATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CAA 90 bp | TACCTCCAGGTTCCCTTCCTGTTGCATACCCAAAGAGGATCAGAAGTCAGTGCAGTGCGACCACAGCGGTaGTTGTGTAAGTTCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YLQVPFLLHTQRGSEVSAVRPQR*LCKFMR Trigger: CCTCATGAACTTACACAACAACCGCTGTGGTCGCAC...TGCACTGACTTCTGATCCTCTTTGGGTATGCAACAGGAAGGGAACCTGGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS-3UTR CAA 90 bp | ATGAAGAGGAACCTGAGAAGAGAGAGAGGAGCTATATCCAGAATTCCTTGTGAAGTGTTTCTGCACTCCTaGCACCGCACAGCACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: MKRNLRRERGAISRIPCEVFLHS*HRTAQH Trigger: GTGCTGTGCTGTGCGGTGCAAGGAGTGCAGAAACAC...TTCACAAGGAATTCTGGATATAGCTCCTCTCTCTCTTCTCAGGTTCCTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CCA 72 bp | CAGCAGCAGGCAGGCAAGACCCAGGCGGGCGGAAGATaGGGACACGTCGGGGGCCGTGGGTCTGGGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: QQQAGKTQAGGR*GHVGGRGSGHG Trigger: CCCGTGCCCAGACCCACGGCCCCCGACGTGTCCCCATCTTCCGCCCGCCTGGGTCTTGCCTGCCTGCTGCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS GCA 72 bp | ATCAGTCCGGGTGGCGTGGCGATAGCCCTGGCGCGCTaGTGTGAAATTGGCCCCATCCTGTGTGGCCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISPGGVAIALAR*CEIGPILCGRH Trigger: GTGACGGCCACACAGGATGGGGCCAATTTCACAGCAGCGCGCCAGGGCTATCGCCACGCCACCCGGACTGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CCA 72 bp | GTCCCCTCGTTGATCATGGTGCCGACCGCGGGTATATaGGTCACAGCTGCACACGCTCAGCTCACCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPSLIMVPTAGI*VTAAHAQLTLA Trigger: AGCCAGGGTGAGCTGAGCGTGTGCAGCTGTGACCCATATACCCGCGGTCGGCACCATGATCAACGAGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS TCA 72 bp | GGATCCATTCCCGGGCACCCTCACCTACTGAGCGCATaGTGTCTGGGTAGCGTTGACACAACTGCCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSIPGHPHLLSA*CLGSVDTTAAA Trigger: GGCAGCGGCAGTTGTGTCAACGCTACCCAGACATCATGCGCTCAGTAGGTGAGGGTGCCCGGGAATGGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS TCA 72 bp | TCGCCTCCTCAGGTAGTCACCTGTGCGTCGGAAGTCTaGGAGTGCTCTCCAGCAGGTGCGCAGAGTACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPPQVVTCASEV*ECSPAGAQSTG Trigger: TCCTGTACTCTGCGCACCTGCTGGAGAGCACTCTCAGACTTCCGACGCACAGGTGACTACCTGAGGAGGCGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS GCA 72 bp | CAGCCCCATCATATCGCCTCCTCAGGTAGTCACCTGTaGGTCGGAAGTCTGAGAGTGCTCTCCAGCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QPHHIASSGSHL*VGSLRVLSSRC Trigger: GCACCTGCTGGAGAGCACTCTCAGACTTCCGACGCACAGGTGACTACCTGAGGAGGCGATATGATGGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS TCA 72 bp | GCACTCTCGGATCCATTCCCGGGCACCCTCACCTACTaGGCGCATGATGTCTGGGTAGCGTTGACACAACTG | + |
|
Preference number: 6 (lower is better) Translates to: ALSDPFPGTLTY*AHDVWVALTQL Trigger: CAGTTGTGTCAACGCTACCCAGACATCATGCGCTCAGTAGGTGAGGGTGCCCGGGAATGGATCCGAGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS GCA 72 bp | TGCGCAGAGTACAGGAGCCACTCACACCGTGACACTTaGACTCCAGCTTCAGGAATCTCCGAACAGCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CAEYRSHSHRDT*TPASGISEQPC Trigger: GCACGGCTGTTCGGAGATTCCTGAAGCTGGAGTGCAAGTGTCACGGTGTGAGTGGCTCCTGTACTCTGCGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CCA 72 bp | TTTCTGCACTCCTTGCACCGCACAGCACAGCACCAGTaGAATTTGCACTCACACTGGGTGACGCGGGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: FLHSLHRTAQHQ*NLHSHWVTRVT Trigger: GGTCACCCGCGTCACCCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGTGCGGTGCAAGGAGTGCAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS TCA 72 bp | TTGTCACTACAGCCACCCCAGTCAAAGTCCCCTCGTTaGTCATGGTGCCGACCGCGGGTATATGGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLQPPQSKSPR*SWCRPRVYGSQ Trigger: CTGTGACCCATATACCCGCGGTCGGCACCATGATCAACGAGGGGACTTTGACTGGGGTGGCTGTAGTGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CAA 72 bp | GTTGTCACTACAGCCACCCCAGTCAAAGTCCCCTCGTaGATCATGGTGCCGACCGCGGGTATATGGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VVTTATPVKVPS*IMVPTAGIWVT Trigger: TGTGACCCATATACCCGCGGTCGGCACCATGATCAACGAGGGGACTTTGACTGGGGTGGCTGTAGTGACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CAA 90 bp | CGGCCACAACACATGATTTCACACCCATCTGTTCCTTTAGAAGTCTaGCTGCAGACGCGGCCTGCGGTACCTAGGGAACCTGCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPQHMISHPSVPLEV*LQTRPAVPREPAAL Trigger: CAAGGCTGCAGGTTCCCTAGGTACCGCAGGCCGCGTCTGCAGCAAGACTTCTAAAGGAACAGATGGGTGTGAAATCATGTGTTGTGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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| CDS CAA 72 bp | CACATGATTTCACACCCATCTGTTCCTTTAGAAGTCTaGCTGCAGACGCGGCCTGCGGTACCTAGGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: HMISHPSVPLEV*LQTRPAVPREP Trigger: AGGTTCCCTAGGTACCGCAGGCCGCGTCTGCAGCAAGACTTCTAAAGGAACAGATGGGTGTGAAATCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029429.6 |
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