Pregenerated sensors for WNT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010797Ensembl transcript IDs: ENSMUST00000010941.6
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCTATGTaGTGTTTCTCCCCGCAGCCAAAGAGGAAATGTCTAGGTGACAGT | + |
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Preference number: 1 (lower is better) Translates to: GCWNLGKHRGSSFAM*CFSPQPKRKCLGDS Trigger: ACTGTCACCTAGACATTTCCTCTTTGGCTGCGGGGAGAAACATCACATAGCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR TCA 90 bp | CAGCCTGTCATGCCATTTCCAAAAAGAAATCAGCAGGAAGAGAGGTaGCATCAGAATGCCCAAGATAGACAGAATAGGGTGTACTTATGT | + |
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Preference number: 1 (lower is better) Translates to: QPVMPFPKRNQQEER*HQNAQDRQNRVYLC Trigger: ACATAAGTACACCCTATTCTGTCTATCTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTTTTGGAAATGGCATGACAGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR-3UTR CCA 90 bp | AATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGTTCAAAAATAACACAGGTGGTTCCCAGTCCTaGGGCCCCCAGAGAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: NSNHFLRCWLTGKFKNNTGGSQS*GPQRGE Trigger: TTCCCCTCTCTGGGGGCCCCAGGACTGGGAACCACC...TGTGTTATTTTTGAACTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR-3UTR TCA 90 bp | ATCCATTCCCCTTTCAGATTCTCTCCAGAGCACACTGAGAAGTCTCATCTCTTATTAAGAAAGAGCCCCTaGAAACAACCCAGAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: IHSPFRFSPEHTEKSHLLLRKSP*KQPRGP Trigger: TGGACCTCTGGGTTGTTTTCAGGGGCTCTTTCTTAA...TAAGAGATGAGACTTCTCAGTGTGCTCTGGAGAGAATCTGAAAGGGGAATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR-3UTR TCA 90 bp | GACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCTATGTGTAATTGGAGTCCTTaGGGGAAGAAAAGGCGAATA | + |
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Preference number: 2 (lower is better) Translates to: DFLGCWNLGKHRGSSFAMCNWSP*GKKRRI Trigger: TATTCGCCTTTTCTTCCCTCAAGGACTCCAATTACA...CATAGCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCATTCCCCTTTCAGATTCTCTCCAGAGCACACTGAGAAGTCTCATCTCTTACACTTTCTAAGGTGTTaGCTGACAGGAAAGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: IHSPFRFSPEHTEKSHLLHFLRC*LTGKFK Trigger: TTTGAACTTTCCTGTCAGCCAACACCTTAGAAAGTG...TAAGAGATGAGACTTCTCAGTGTGCTCTGGAGAGAATCTGAAAGGGGAATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR-3UTR TCA 90 bp | AATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGTTCAAAAATAACACAGAGGTCCAGTGTCCTTaGAGATGTAATTGGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NSNHFLRCWLTGKFKNNTEVQCP*RCNWSP Trigger: AGGACTCCAATTACATCTTCAAGGACACTGGACCTC...TGTGTTATTTTTGAACTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR-3UTR TCA 90 bp | AATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGTTCAAAAATAACACAAAAGGGGGTTTCTCTTaGGATGAAGGCTTCATGCCT | + |
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Preference number: 2 (lower is better) Translates to: NSNHFLRCWLTGKFKNNTKGGFS*DEGFMP Trigger: AGGCATGAAGCCTTCATCTCAAGAGAAACCCCCTTT...TGTGTTATTTTTGAACTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR CCA 72 bp | CCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTaGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCT | + |
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Preference number: 3 (lower is better) Translates to: PAPQGNTDFLGC*NLGKHRGSSFA Trigger: AGCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR TCA 72 bp | AATCTGGGAAAACACAGAGGAAGTTCCTTCGCTATGTaGTGTTTCTCCCCGCAGCCAAAGAGGAAATGTCTA | + |
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Preference number: 3 (lower is better) Translates to: NLGKHRGSSFAM*CFSPQPKRKCL Trigger: TAGACATTTCCTCTTTGGCTGCGGGGAGAAACATCACATAGCGAAGGAACTTCCTCTGTGTTTTCCCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR TCA 72 bp | ATGCCATTTCCAAAAAGAAATCAGCAGGAAGAGAGGTaGCATCAGAATGCCCAAGATAGACAGAATAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: MPFPKRNQQEER*HQNAQDRQNRV Trigger: CACCCTATTCTGTCTATCTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTTTTGGAAATGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGTCACCAAGGATGCTATCAACAGCTATCACTTAGTTAAAGCCCTTGCTTACAGACTTTCTGGGTTGTaGGAATCTGGGAAAACACAG | + |
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Preference number: 3 (lower is better) Translates to: KVTKDAINSYHLVKALAYRLSGL*ESGKTQ Trigger: CTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTCT...GTAAGCAAGGGCTTTAACTAAGTGATAGCTGTTGATAGCATCCTTGGTGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| 3UTR TCA 72 bp | TGTTGGCTGACAGGAAAGTTCAAAAATAACACAGTCTaGAAGGACAAACATTCTCACCCTATTATATCCAAT | + |
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Preference number: 3 (lower is better) Translates to: CWLTGKFKNNTV*KDKHSHPIISN Trigger: ATTGGATATAATAGGGTGAGAATGTTTGTCCTTTCAGACTGTGTTATTTTTGAACTTTCCTGTCAGCCAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | CCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATCTGGGACCCAGTCGGCACTCTTaGGGGCCTTGCATGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PYPAPQGNTDFLGCWNLGPSRHS*GPCMCA Trigger: TGCACACATGCAAGGCCCCCAAGAGTGCCGACTGGG...TCCCAGATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | CCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATCTGGGAAGTCGCCTGTTTTCCTaGAGTCAGCCATGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PYPAPQGNTDFLGCWNLGSRLFS*SQPWPA Trigger: GGCTGGCCATGGCTGACTTCAGGAAAACAGGCGACT...TCCCAGATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | TTCCATCCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATGGCACGCATCACATCTaGGTGTCGGTGGCACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FHPYPAPQGNTDFLGCWNGTHHI*VSVAQL Trigger: CAGCTGTGCCACCGACACCCAGATGTGATGCGTGCC...ATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGGATGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | TTCCATCCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATCGGCCAAAGAGGCTGTaGTCTCTGTCCAGGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: FHPYPAPQGNTDFLGCWNRPKRL*SLSRVL Trigger: CAACACCCTGGACAGAGATCACAGCCTCTTTGGCCG...ATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGGATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | CCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATCTGGGACTGCCTCTCGGTCCCTaGTACAGTAGTCTGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PYPAPQGNTDFLGCWNLGLPLGP*YSSLEN Trigger: ATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAG...TCCCAGATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | TTCCATCCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATTGCCATCCTGGTTCATaGCTACCTGGATGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: FHPYPAPQGNTDFLGCWNCHPGS*LPGWPH Trigger: ATGGGGCCATCCAGGTAGTCATGAACCAGGATGGCA...ATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGGATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | TTCCATCCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATACTTGGTCATCCGGGTaGCGTGGGATGTGTCATAGC | + |
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Preference number: 4 (lower is better) Translates to: FHPYPAPQGNTDFLGCWNTWSSG*RGMCHS Trigger: GCTATGACACATCCCACGTCACCCGGATGACCAAGT...ATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGGATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | AAGGGGGTTTCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAAGGGGCCTTGCATGTGTaGACGTCCAGGGCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KGVSLEMKASCLKKEPLKGALHV*TSRASR Trigger: CCTGGAGGCCCTGGACGTGCACACATGCAAGGCCCC...TTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGAAACCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | CCCTACCCCGCGCCCCAGGGAAACACAGACTTTCTGGGTTGTTGGAATCTGGGATGGTTCATGACTACCTaGATGGCCCCATTGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: PYPAPQGNTDFLGCWNLGWFMTT*MAPLYF Trigger: GAAGTACAATGGGGCCATCCAGGTAGTCATGAACCA...TCCCAGATTCCAACAACCCAGAAAGTCTGTGTTTCCCTGGGGCGCGGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | AAAGTCACCAAGGATGCTATCAACAGCTATCACTTAGTTAAAGCCCTTGCTTACTGTCGGTGGCACAGCTaGCGCTGCCGGCTCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: KVTKDAINSYHLVKALAYCRWHS*RCRLTR Trigger: CCTGGTGAGCCGGCAGCGTCAGCTGTGCCACCGACA...GTAAGCAAGGGCTTTAACTAAGTGATAGCTGTTGATAGCATCCTTGGTGACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | GATGGGACAGTGAGGAATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGCACTCTTGGGGGCCTTaGATGTGTGCACGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: DGTVRNSNHFLRCWLTGKHSWGP*MCARPG Trigger: CCCTGGACGTGCACACATGCAAGGCCCCCAAGAGTG...CTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATTCCTCACTGTCCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | TCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAAACAACCCAGGGCTACAGGCCCTGGTaGTGGCAAATACAACGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLEMKASCLKKEPLKTTQGYRPW*WQIQRQ Trigger: CTGGCGTTGTATTTGCCATCACCAGGGCCTGTAGCC...CTGGGTTGTTTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | TCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAAACAACCCAGCTCTGTCCAGGGTGTTaGAGTTCCAGCGATGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLEMKASCLKKEPLKTTQLCPGC*SSSDAG Trigger: GCCAGCATCGCTGGAACTGCAACACCCTGGACAGAG...CTGGGTTGTTTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | AAGGGGGTTTCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAACACCCCAGTCGAAGGTaGCTTTGCTGTCCTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KGVSLEMKASCLKKEPLKHPSRR*LCCPWH Trigger: GTGCCAAGGACAGCAAAGGCACCTTCGACTGGGGTG...TTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGAAACCCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | GACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCTATGTGTACCCAGGGAGCCTaGCTCTCGGTCCCTGATACA | + |
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Preference number: 4 (lower is better) Translates to: DFLGCWNLGKHRGSSFAMCTQGA*LSVPDT Trigger: TGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACA...CATAGCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | TCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAAACAACCCAGCCGGCTCACCAGGCCTaGCACATTGTCACACATCAC | + |
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Preference number: 4 (lower is better) Translates to: SLEMKASCLKKEPLKTTQPAHQA*HIVTHH Trigger: GTGATGTGTGACAATGTGCCAGGCCTGGTGAGCCGG...CTGGGTTGTTTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | AAGGGGGTTTCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAATGGCGGAACTGGTGTTaGCACTCTGCAGTCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: KGVSLEMKASCLKKEPLKWRNWC*HSAVHS Trigger: TGAGTGGACTGCAGAGTGCCAACACCAGTTCCGCCA...TTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGAAACCCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | TGCCATTTCCAAAAAGAAATCAGCAGGAAGAGAGGTGACATCAGAATGCCCAAGCGATGCTGGCGGAACTaGTGTTGGCACTCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: CHFQKEISRKRGDIRMPKRCWRN*CWHSAV Trigger: GACTGCAGAGTGCCAACACCAGTTCCGCCAGCATCG...CTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTTTTGGAAATGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | TCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAAACAACCCAGTCTCATGTACCACCATaGAGAGCTGACCTCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLEMKASCLKKEPLKTTQSHVPP*RADLRG Trigger: ACCCCTGAGGTCAGCTCTTCATGGTGGTACATGAGA...CTGGGTTGTTTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | ATAACACAGTCTGAAAGGACAAACATTCTCACCCTATTATATCCAATAGCCAATGCCTCCAGGCAGTCCTaGCAGCGCACGGCACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ITQSERTNILTLLYPIANASRQS*QRTAQH Trigger: GTGCTGTGCCGTGCGCTGTCAGGACTGCCTGGAGGC...ATTGGCTATTGGATATAATAGGGTGAGAATGTTTGTCCTTTCAGACTGTGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | CACAGACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCCGCCAGCTGAAGAGATaGCGTAAACAAAGGCCGATT | + |
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Preference number: 4 (lower is better) Translates to: HRLSGLLESGKTQRKFLRRQLKR*RKQRPI Trigger: AATCGGCCTTTGTTTACGCCATCTCTTCAGCTGGCG...GCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | TCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAAACAACCCAGTGCCTTTCCTCTCCTTaGCATCTACAAAGGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: SLEMKASCLKKEPLKTTQCLSSP*HLQRHG Trigger: CCCGTGCCTTTGTAGATGCCAAGGAGAGGAAAGGCA...CTGGGTTGTTTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | GACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCTATGTCTTATTGGCTACAGTaGAGCCAGTGCCATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DFLGCWNLGKHRGSSFAMSYWLQ*SQCHPG Trigger: ACCAGGATGGCACTGGCTTCACTGTAGCCAATAAGA...CATAGCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | AAGGGGGTTTCTCTTGAGATGAAGGCTTCATGCCTTAAGAAAGAGCCCCTGAAAAGTCAATATTGTCACTaGAGCCACCCCAGTCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KGVSLEMKASCLKKEPLKSQYCH*SHPSRR Trigger: CCTTCGACTGGGGTGGCTGCAGTGACAATATTGACT...TTTCAGGGGCTCTTTCTTAAGGCATGAAGCCTTCATCTCAAGAGAAACCCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | TGCCATTTCCAAAAAGAAATCAGCAGGAAGAGAGGTGACATCAGAATGCCCAAGAGTCGAAGGTGCCTTTaGTGTCCTTGGCACTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CHFQKEISRKRGDIRMPKSRRCL*CPWHFL Trigger: AAGGAAGTGCCAAGGACAGCAAAGGCACCTTCGACT...CTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTTTTGGAAATGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | TGCCATTTCCAAAAAGAAATCAGCAGGAAGAGAGGTGACATCAGAATGCCCAAGGACTTTAATTCTCCTTaGCTACAGGCCCTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: CHFQKEISRKRGDIRMPKDFNSP*LQALVM Trigger: CATCACCAGGGCCTGTAGCCAAGGAGAATTAAAGTC...CTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTTTTGGAAATGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | AATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGTTCAAAAATAACACACCACACCCAGGCCAATaGCACGCATCACATCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NSNHFLRCWLTGKFKNNTPHPGQ*HASHLG Trigger: ACCCAGATGTGATGCGTGCCATTGGCCTGGGTGTGG...TGTGTTATTTTTGAACTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | GACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCTATGACTTCCTTTCTTCTTTaGATCACAGGAGCAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: DFLGCWNLGKHRGSSFAMTSFLL*ITGAGL Trigger: AAGTCCTGCTCCTGTGATCCAAAGAAGAAAGGAAGT...CATAGCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | AAAGTCACCAAGGATGCTATCAACAGCTATCACTTAGTTAAAGCCCTTGCTTACAAGCCAGTGCCATCCTaGTTCATGACTACCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: KVTKDAINSYHLVKALAYKPVPS*FMTTWM Trigger: CATCCAGGTAGTCATGAACCAGGATGGCACTGGCTT...GTAAGCAAGGGCTTTAACTAAGTGATAGCTGTTGATAGCATCCTTGGTGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR TCA 90 bp | AAAGAAATCAGCAGGAAGAGAGGTGACATCAGAATGCCCAAGATAGACAGAATAGAGCCACTCACACCATaGCACTTGCATTCTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: KEISRKRGDIRMPKIDRIEPLTP*HLHSCF Trigger: GAAACAAGAATGCAAGTGTCATGGTGTGAGTGGCTC...TATTCTGTCTATCTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | AATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGTTCAAAAATAACACAGGGCTCTGGCATCCTTaGCTTTCCTCTCCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: NSNHFLRCWLTGKFKNNTGLWHP*LSSPWH Trigger: ATGCCAAGGAGAGGAAAGGCAAGGATGCCAGAGCCC...TGTGTTATTTTTGAACTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR GCA 90 bp | ATAACACAGTCTGAAAGGACAAACATTCTCACCCTATTATATCCAATAGCCAATCTTCGCAGCTGTCCATaGCTCGGGAAGTCAAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: ITQSERTNILTLLYPIANLRSCP*LGKSSC Trigger: GCAACTTGACTTCCCGAGGCATGGACAGCTGCGAAG...ATTGGCTATTGGATATAATAGGGTGAGAATGTTTGTCCTTTCAGACTGTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | CACAGACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCCCTGATACAGTAGTCTaGAGAATTCTCAAAATACAC | + |
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Preference number: 4 (lower is better) Translates to: HRLSGLLESGKTQRKFLRPDTVV*RILKIH Trigger: GTGTATTTTGAGAATTCTCCAGACTACTGTATCAGG...GCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CCA 90 bp | AAAGAAATCAGCAGGAAGAGAGGTGACATCAGAATGCCCAAGATAGACAGAATAACGGCACAGCACCAGTaGAATTTACACTCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: KEISRKRGDIRMPKIDRITAQHQ*NLHSHL Trigger: CAAGTGTGAGTGTAAATTCCACTGGTGCTGTGCCGT...TATTCTGTCTATCTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS GCA 90 bp | GGAGGAGGACCCGGCCAAAGAGGCTGTGATCTCTGTCCAGGGTGTTaGAGTTCCAGCGATGCTGGCGGAACTGGTGTTGGCACTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GGGPGQRGCDLCPGC*SSSDAGGTGVGTLQ Trigger: CTGCAGAGTGCCAACACCAGTTCCGCCAGCATCGCTGGAACTGCAACACCCTGGACAGAGATCACAGCCTCTTTGGCCGGGTCCTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS TCA 90 bp | GGATGGCCCCATTGTACTTCCTCCAGAGATAGTCGCCTGTTTTCCTaGAGTCAGCCATGGCCAGCCAGCATGTCCTCAGAGTACAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GWPHCTSSRDSRLFS*SQPWPASMSSEYRS Trigger: GCTCCTGTACTCTGAGGACATGCTGGCTGGCCATGGCTGACTTCAGGAAAACAGGCGACTATCTCTGGAGGAAGTACAATGGGGCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | CACAGACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCCTGGCGGAACTGGTGTaGGCACTCTGCAGTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: HRLSGLLESGKTQRKFLRLAELV*ALCSPL Trigger: GAGTGGACTGCAGAGTGCCAACACCAGTTCCGCCAG...GCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | GATGGGACAGTGAGGAATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGGCACTCTTGGGGGCCTaGCATGTGTGCACGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DGTVRNSNHFLRCWLTGKALLGA*HVCTSR Trigger: CCTGGACGTGCACACATGCAAGGCCCCCAAGAGTGC...CTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATTCCTCACTGTCCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | CACAGACTTTCTGGGTTGTTGGAATCTGGGAAAACACAGAGGAAGTTCCTTCGCACCAGGCCTGGCACATaGTCACACATCACCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: HRLSGLLESGKTQRKFLRTRPGT*SHITLE Trigger: CTCCAGGGTGATGTGTGACAATGTGCCAGGCCTGGT...GCGAAGGAACTTCCTCTGTGTTTTCCCAGATTCCAACAACCCAGAAAGTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | GATGGGACAGTGAGGAATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGTCTCTGTCCAGGGTGTaGCAGTTCCAGCGATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: DGTVRNSNHFLRCWLTGKSLSRV*QFQRCW Trigger: CCAGCATCGCTGGAACTGCAACACCCTGGACAGAGA...CTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATTCCTCACTGTCCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CCA 90 bp | GGCTTCTTAAACCTCTTATTGGCTACAGTGAAGCCAGTGCCATCCTaGTTCATGACTACCTGGATGGCCCCATTGTACTTCCTCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: GFLNLLLATVKPVPS*FMTTWMAPLYFLQR Trigger: TCTCTGGAGGAAGTACAATGGGGCCATCCAGGTAGTCATGAACCAGGATGGCACTGGCTTCACTGTAGCCAATAAGAGGTTTAAGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CCA 90 bp | CGCTGTACCCAGGGAGCCTGCCTCTCGGTCCCTGATACAGTAGTCTaGAGAATTCTCAAAATACACGAGGTCATTTTTCGTTGGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: RCTQGACLSVPDTVV*RILKIHEVIFRWLL Trigger: AAGAAGCCAACGAAAAATGACCTCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | GATGGGACAGTGAGGAATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGAATTTACACTCACACTaGGTCATCCGGGTGACGTGG | + |
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Preference number: 5 (lower is better) Translates to: DGTVRNSNHFLRCWLTGKNLHSH*VIRVTW Trigger: CCACGTCACCCGGATGACCAAGTGTGAGTGTAAATT...CTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATTCCTCACTGTCCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | ATAACACAGTCTGAAAGGACAAACATTCTCACCCTATTATATCCAATAGCCAATGCCCAGTCGGCACTCTaGGGGGCCTTGCATGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: ITQSERTNILTLLYPIANAQSAL*GALHVC Trigger: GCACACATGCAAGGCCCCCAAGAGTGCCGACTGGGC...ATTGGCTATTGGATATAATAGGGTGAGAATGTTTGTCCTTTCAGACTGTGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | AAAGAAATCAGCAGGAAGAGAGGTGACATCAGAATGCCCAAGATAGACAGAATACAGTCGAAGGTGCCTTaGCTGTCCTTGGCACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: KEISRKRGDIRMPKIDRIQSKVP*LSLALP Trigger: AGGAAGTGCCAAGGACAGCAAAGGCACCTTCGACTG...TATTCTGTCTATCTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | AATAGCAATCACTTTCTAAGGTGTTGGCTGACAGGAAAGTTCAAAAATAACACACCTCGGGAAGTCAAGTaGCACACACGGCCCGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: NSNHFLRCWLTGKFKNNTPREVK*HTRPAV Trigger: TACAGCGGGCCGTGTGTGCAACTTGACTTCCCGAGG...TGTGTTATTTTTGAACTTTCCTGTCAGCCAACACCTTAGAAAGTGATTGCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CCA 90 bp | ACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTTATTGGCTACAGTGAAGCCAGTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: TVVWRILKIHEVIFR*LLKPLIGYSEASAI Trigger: GATGGCACTGGCTTCACTGTAGCCAATAAGAGGTTTAAGAAGCCAACGAAAAATGACCTCGTGTATTTTGAGAATTCTCCAGACTACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS-3UTR CAA 90 bp | AAAGAAATCAGCAGGAAGAGAGGTGACATCAGAATGCCCAAGATAGACAGAATAATGACACTTGCATTCTaGTTTCAAGAAGCGCTTTAC | + |
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Preference number: 5 (lower is better) Translates to: KEISRKRGDIRMPKIDRIMTLAF*FQEALY Trigger: GTAAAGCGCTTCTTGAAACAAGAATGCAAGTGTCAT...TATTCTGTCTATCTTGGGCATTCTGATGTCACCTCTCTTCCTGCTGATTTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CAA 72 bp | CATGTAGGCGTCGCCCAGTCGGCACTCTTGGGGGCCTaGCATGTGTGCACGTCCAGGGCCTCCAGGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: HVGVAQSALLGA*HVCTSRASRQS Trigger: GGACTGCCTGGAGGCCCTGGACGTGCACACATGCAAGGCCCCCAAGAGTGCCGACTGGGCGACGCCTACATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CAA 90 bp | CCACAACACATAACTTCGCAGCTGTCCATGCCTCGGGAAGTCAAGTaGCACACACGGCCCGCTGTACCCAGGGAGCCTGCCTCTCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PQHITSQLSMPREVK*HTRPAVPREPASRS Trigger: GGACCGAGAGGCAGGCTCCCTGGGTACAGCGGGCCGTGTGTGCAACTTGACTTCCCGAGGCATGGACAGCTGCGAAGTTATGTGTTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS GCA 72 bp | CCCGGCCAAAGAGGCTGTGATCTCTGTCCAGGGTGTTaGAGTTCCAGCGATGCTGGCGGAACTGGTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PGQRGCDLCPGC*SSSDAGGTGVG Trigger: GCCAACACCAGTTCCGCCAGCATCGCTGGAACTGCAACACCCTGGACAGAGATCACAGCCTCTTTGGCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CAA 72 bp | ATAACTTCGCAGCTGTCCATGCCTCGGGAAGTCAAGTaGCACACACGGCCCGCTGTACCCAGGGAGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ITSQLSMPREVK*HTRPAVPREPA Trigger: GGCAGGCTCCCTGGGTACAGCGGGCCGTGTGTGCAACTTGACTTCCCGAGGCATGGACAGCTGCGAAGTTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS TCA 72 bp | GGCCCGCTGTACCCAGGGAGCCTGCCTCTCGGTCCCTaGTACAGTAGTCTGGAGAATTCTCAAAATACACGA | + |
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Preference number: 6 (lower is better) Translates to: GPLYPGSLPLGP*YSSLENSQNTR Trigger: TCGTGTATTTTGAGAATTCTCCAGACTACTGTATCAGGGACCGAGAGGCAGGCTCCCTGGGTACAGCGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS TCA 72 bp | AGCAGGACTTTAATTCTCCTTGGCTACAGGCCCTGGTaGTGGCAAATACAACGCCAGCTGAAGAGATGGCGT | + |
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Preference number: 6 (lower is better) Translates to: SRTLILLGYRPW*WQIQRQLKRWR Trigger: ACGCCATCTCTTCAGCTGGCGTTGTATTTGCCATCACCAGGGCCTGTAGCCAAGGAGAATTAAAGTCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CCA 72 bp | AACCTCTTATTGGCTACAGTGAAGCCAGTGCCATCCTaGTTCATGACTACCTGGATGGCCCCATTGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: NLLLATVKPVPS*FMTTWMAPLYF Trigger: GAAGTACAATGGGGCCATCCAGGTAGTCATGAACCAGGATGGCACTGGCTTCACTGTAGCCAATAAGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CAA 72 bp | AGTACAGGAGCCACTCACACCATGACACTTGCATTCTaGTTTCAAGAAGCGCTTTACAGCCTTCCTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: STGATHTMTLAF*FQEALYSLPSS Trigger: GCTGGAAGGAAGGCTGTAAAGCGCTTCTTGAAACAAGAATGCAAGTGTCATGGTGTGAGTGGCTCCTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CAA 72 bp | ACGAGGTCATTTTTCGTTGGCTTCTTAAACCTCTTATaGGCTACAGTGAAGCCAGTGCCATCCTGGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: TRSFFVGFLNLL*ATVKPVPSWFM Trigger: CATGAACCAGGATGGCACTGGCTTCACTGTAGCCAATAAGAGGTTTAAGAAGCCAACGAAAAATGACCTCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CAA 90 bp | TCAAAATACACGAGGTCATTTTTCGTTGGCTTCTTAAACCTCTTATaGGCTACAGTGAAGCCAGTGCCATCCTGGTTCATGACTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: SKYTRSFFVGFLNLL*ATVKPVPSWFMTTW Trigger: CCAGGTAGTCATGAACCAGGATGGCACTGGCTTCACTGTAGCCAATAAGAGGTTTAAGAAGCCAACGAAAAATGACCTCGTGTATTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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| CDS CCA 72 bp | TGGAGAATTCTCAAAATACACGAGGTCATTTTTCGTTaGCTTCTTAAACCTCTTATTGGCTACAGTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: WRILKIHEVIFR*LLKPLIGYSEA Trigger: GGCTTCACTGTAGCCAATAAGAGGTTTAAGAAGCCAACGAAAAATGACCTCGTGTATTTTGAGAATTCTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010941.6 |
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