Pregenerated sensors for WNT16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029671Ensembl transcript IDs: ENSMUST00000031681.10, ENSMUST00000128245.8, ENSMUST00000148639.2, ENSMUST00000176681.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCAGCATCTCGTTCTTACTTTCACAAGGAGAAACCTTAAGGCATaGAGTGCTGAACTTGAGCAGCTGGGGAAAAGGCATGCAGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: SQHLVLTFTRRNLKA*SAELEQLGKRHAAN Trigger: GTTAGCTGCATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGAAAGTAAGAACGAGATGCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR TCA 90 bp | ACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTGTaGTTTGAAGCCTGCCAGAAAGAAAGAAATCGTAGACTAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: TFSTSESQAILWISL*FEACQKERNRRLAQ Trigger: CTGGGCTAGTCTACGATTTCTTTCTTTCTGGCAGGCTTCAAATCACAAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| 3UTR CCA 90 bp | ATCACATCATTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTaGAGTCATAACTTTAGGAATGGTGTCAGAAACCAATTGGGAATC | + |
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Preference number: 1 (lower is better) Translates to: ITSFSQPITARQHYS*SHNFRNGVRNQLGI Trigger: GATTCCCAATTGGTTTCTGACACCATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAATGATGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR TCA 90 bp | CCTAAGAGATACTGCAACTTGTCTGAGTTTACTTCAGGAAGCTGTTaGAGTTTGGCAATTCACTATAACTTTCCCAAAAAGACTAACATG | + |
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Preference number: 1 (lower is better) Translates to: PKRYCNLSEFTSGSC*SLAIHYNFPKKTNM Trigger: CATGTTAGTCTTTTTGGGAAAGTTATAGTGAATTGCCAAACTTCAACAGCTTCCTGAAGTAAACTCAGACAAGTTGCAGTATCTCTTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR CCA 90 bp | ATTATTCTTGGAGTCATAACTTTAGGAATGGTGTCAGAAACCAATTaGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAATCATCTATC | + |
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Preference number: 1 (lower is better) Translates to: IILGVITLGMVSETN*ESEYLRSAVRKSSI Trigger: GATAGATGATTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCATTCCTAAAGTTATGACTCCAAGAATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR GCA 90 bp | GCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTCGACTTCCCCATCAGTaGACAGTAGGGGCGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ATANLFNFRIPSNPLDQLRLPHQ*TVGAPS Trigger: GGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCG...AAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| 3UTR CAA 90 bp | TTCTTACTTTCACAAGGAGAAACCTTAAGGCATGCAGTGCTGAACTaGAGCAGCTGGGGAAAAGGCATGCAGCTAACAGCGGTGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: FLLSQGETLRHAVLN*SSWGKGMQLTAVLN Trigger: GTTCAGCACCGCTGTTAGCTGCATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGAAAGTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGGAATGTCTGAAGTTCCTACATaGAGCTGCGGGAGACTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSQSPPGNIILGVITLGMSEVPT*SCGRLS Trigger: TGAAAGTCTCCCGCAGCTTCATGTAGGAACTTCAGA...CATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCGATCAGCTTGTGATTTaGAGCCTGCCAGAAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: FPNHPKATANLFNFRIPSDQLVI*SLPERK Trigger: CTTTCTTTCTGGCAGGCTTCAAATCACAAGCTGATC...GCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGGAATGCGCTTTCCTACAGTTTaGGTTTGGGATTTTGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LSQSPPGNIILGVITLGMRFPTV*VWDFES Trigger: ACTCTCAAAATCCCAAACTCAAACTGTAGGAAAGCG...CATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGGAATGTCTAAGCATTGTGAATaGGCCTCATTATTCACTTGC | + |
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Preference number: 2 (lower is better) Translates to: LSQSPPGNIILGVITLGMSKHCE*ASLFTC Trigger: GCAAGTGAATAATGAGGCTCATTCACAATGCTTAGA...CATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGGAATGAAATGGAAATGCAGATaGAAACTTCAGGAGTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LSQSPPGNIILGVITLGMKWKCR*KLQELW Trigger: CCACAACTCCTGAAGTTTGCATCTGCATTTCCATTT...CATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTACTTCAGGAAGCTGTTaGAGTTTGGCAATTCACTAT | + |
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Preference number: 2 (lower is better) Translates to: SFSQPITARQHYSWSHNFTSGSC*SLAIHY Trigger: ATAGTGAATTGCCAAACTTCAACAGCTTCCTGAAGT...AAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR GCA 90 bp | TCATTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTATCTCATTCTGGAAATaGCAGAAATCAGTCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: SFSQPITARQHYSWSHNFISFWK*QKSVYL Trigger: GAGATAGACTGATTTCTGGCATTTCCAGAATGAGAT...AAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGAAATACCCATAAATATTCCAAGTCACATTATTCCCAGAAGTTCTGCCCCAGAAACCTTAAGGCATaGAGTGCTGAACTTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KRNTHKYSKSHYSQKFCPRNLKA*SAELEQ Trigger: CTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCT...GGGGCAGAACTTCTGGGAATAATGTGACTTGGAATATTTATGGGTATTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAAGCCAATATTAAAAACTaGGTCAATGTCTCGTCTACG | + |
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Preference number: 2 (lower is better) Translates to: MVSETNWESEYLRSAVRKANIKN*VNVSST Trigger: CGTAGACGAGACATTGACTCAGTTTTTAATATTGGC...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR CAA 90 bp | AGGAAGGAACAGCTGCCTATTTTATTTCTTATAAACTGTCAGCGTTaGACTCTTAAATCATTGGCATTGATTCACCCGGAAGCATTAATC | + |
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Preference number: 2 (lower is better) Translates to: RKEQLPILFLINCQR*TLKSLALIHPEALI Trigger: GATTAATGCTTCCGGGTGAATCAATGCCAATGATTTAAGAGTCAAACGCTGACAGTTTATAAGAAATAAAATAGGCAGCTGTTCCTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAAATACCCATAAATATTCCAAGTCACATTATTCCCAGAAGTTCTGCCCCTGGTGTTTGTCTAAATaGAACCAACATAGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: KRNTHKYSKSHYSQKFCPWCLSK*NQHSPC Trigger: GCATGGACTATGTTGGTTTCATTTAGACAAACACCA...GGGGCAGAACTTCTGGGAATAATGTGACTTGGAATATTTATGGGTATTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAAGAGTTAGTCATAAGATaGGCTTCTGAGGTTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: MVSETNWESEYLRSAVRKELVIR*ASEVFV Trigger: AACAAAAACCTCAGAAGCTCATCTTATGACTAACTC...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAAAACGAAACTGAAATTTaGACAAAACATACCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: MVSETNWESEYLRSAVRKNETEI*TKHTPL Trigger: CAGAGGGGTATGTTTTGTGCAAATTTCAGTTTCGTT...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCATCCTTTAAACATAGTGATTTGATGCGCCCTGGTGATTTTCTTGAGCAGATACAAATCTCATTCTaGAAATGCCAGAAATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: FSSFKHSDLMRPGDFLEQIQISF*KCQKSV Trigger: GACTGATTTCTGGCATTTCCAGAATGAGATTTGTAT...CTGCTCAAGAAAATCACCAGGGCGCATCAAATCACTATGTTTAAAGGATGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAAGAAGCTGTTGAAGTTTaGCAATTCACTATAACTTTC | + |
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Preference number: 2 (lower is better) Translates to: MVSETNWESEYLRSAVRKEAVEV*QFTITF Trigger: GAAAGTTATAGTGAATTGCCAAACTTCAACAGCTTC...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR GCA 72 bp | CTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATaGCAACACCACACCTTGGTTACTACAGAGGCGTCT | + |
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Preference number: 3 (lower is better) Translates to: LPHQCTVGAPSR*QHHTLVTTEAS Trigger: AGACGCCTCTGTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| 3UTR CCA 72 bp | GAAACCTTAAGGCATGCAGTGCTGAACTTGAGCAGCTaGGGAAAAGGCATGCAGCTAACAGCGGTGCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: ETLRHAVLNLSS*GKGMQLTAVLN Trigger: GTTCAGCACCGCTGTTAGCTGCATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR CAA 90 bp | CATGCAGTGCTGAACTTGAGCAGCTGGGGAAAAGGCATGCAGCTAACAGCGGTGACTCACGGAGCAGTCTaGTTTTCTACTTTACCTGTT | + |
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Preference number: 3 (lower is better) Translates to: HAVLNLSSWGKGMQLTAVTHGAV*FSTLPV Trigger: AACAGGTAAAGTAGAAAACAAGACTGCTCCGTGAGT...CACCGCTGTTAGCTGCATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR GCA 72 bp | CTCGTTCTTACTTTCACAAGGAGAAACCTTAAGGCATaGAGTGCTGAACTTGAGCAGCTGGGGAAAAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: LVLTFTRRNLKA*SAELEQLGKRH Trigger: ATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGAAAGTAAGAACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAACATGCAGTGCTGAACTaGAGCAGCTGGGGAAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: MVSETNWESEYLRSAVRKHAVLN*SSWGKG Trigger: GCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATG...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGGAATGGCCCTGGTGATTTTCTaGAGCAGAATGCTAGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: LSQSPPGNIILGVITLGMALVIF*SRMLEF Trigger: AAACTCTAGCATTCTGCTCAAGAAAATCACCAGGGC...CATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR CAA 90 bp | TCACAAGGAGAAACCTTAAGGCATGCAGTGCTGAACTTGAGCAGCTGGGGAAAATACTTCAGGAAGCTGTaGAAGTTTGGCAATTCACTA | + |
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Preference number: 3 (lower is better) Translates to: SQGETLRHAVLNLSSWGKYFRKL*KFGNSL Trigger: TAGTGAATTGCCAAACTTCAACAGCTTCCTGAAGTA...TTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR CCA 72 bp | TTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTaGAGTCATAACTTTAGGAATGGTGTCAGAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: FSQPITARQHYS*SHNFRNGVRNQ Trigger: TTGGTTTCTGACACCATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR-3UTR CAA 90 bp | TCATTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAACGAAAGCAAGCAGTaGAATAAAGAAAACTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SFSQPITARQHYSWSHNFNESKQ*NKENWL Trigger: CAGCCAGTTTTCTTTATTCAACTGCTTGCTTTCGTT...AAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR GCA 72 bp | TATCAATGTATATTTCCCAAATCATCCAAAGGCGACTaGCAACCTTTTCAACTTCAGAATCCCAAGCAATCC | + |
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Preference number: 3 (lower is better) Translates to: YQCIFPKSSKGD*QPFQLQNPKQS Trigger: GGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAAATATACATTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| 3UTR GCA 72 bp | ATATTTAAAGATCTTGCCGAAACTCTCCAAAAGGTGTaGCCTGTATCTTCTCTGCTGCGGTTCTTAATTAAC | + |
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Preference number: 3 (lower is better) Translates to: IFKDLAETLQKV*PVSSLLRFLIN Trigger: GTTAATTAAGAACCGCAGCAGAGAAGATACAGGGCACACCTTTTGGAGAGTTTCGGCAAGATCTTTAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148639.2 |
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| 3UTR CCA 72 bp | GGAGTCATAACTTTAGGAATGGTGTCAGAAACCAATTaGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: GVITLGMVSETN*ESEYLRSAVRK Trigger: TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCATTCCTAAAGTTATGACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR CCA 72 bp | ACTTGTCTGAGTTTACTTCAGGAAGCTGTTGAAGTTTaGCAATTCACTATAACTTTCCCAAAAAGACTAACA | + |
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Preference number: 3 (lower is better) Translates to: TCLSLLQEAVEV*QFTITFPKRLT Trigger: TGTTAGTCTTTTTGGGAAAGTTATAGTGAATTGCCAAACTTCAACAGCTTCCTGAAGTAAACTCAGACAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| 3UTR TCA 72 bp | GTTTTCTACTTTACCTGTTTGAATTGCATGTTCAAATaGAATGGAAATGCAGATGCAAACTTCAGGAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: VFYFTCLNCMFK*NGNADANFRSC Trigger: ACAACTCCTGAAGTTTGCATCTGCATTTCCATTTCATTTGAACATGCAATTCAAACAGGTAAAGTAGAAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR CCA 90 bp | AGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACACCACATCCAGTTGCCCTaGGTTCCGCAGGGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQRLPHQCTVGAPSRCQHHIQLP*VPQGSS Trigger: GCTGCTCCCCTGCGGAACCCAGGGCAACTGGATGTG...GTGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR TCA 90 bp | AGGGGCGCCCTCCAGATGCCAACACCACACCTTGGTTACTACAGAGGCGTCTCATGGCTTCTGCACTCCTaGATGCCCAGCCTGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGALQMPTPHLGYYRGVSWLLHS*MPSLAP Trigger: GGGCGCCAGGCTGGGCATTCAGGAGTGCAGAAGCCA...TGAGACGCCTCTGTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR GCA 90 bp | TTACAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCACCAACCACATCCAGTTaGCCTGGGTTCCGCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LQAATSPSVHSRGALQMPPTTSS*PGFRRG Trigger: TCCCCTGCGGAACCCAGGGCAACTGGATGTGGTTGG...TGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR TCA 90 bp | CAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACACCAGCCTTCACTTGGTaGGCCACCATTCTGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: QAATSPSVHSRGALQMPTPAFTW*ATILQG Trigger: ACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGG...TGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR GCA 90 bp | AGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACACTACTTTCACACCTCCTaGAGCGGACGTAGCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: RQRLPHQCTVGAPSRCQHYFHTS*SGRSST Trigger: GGTGCTGCTACGTCCGCTGCAGGAGGTGTGAAAGTA...GTGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR CCA 90 bp | TTACAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCATTGCACTCTCTGCCCTaGGTCCCAGGAATCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LQAATSPSVHSRGALQMPLHSLP*VPGIPS Trigger: ACTGGGGATTCCTGGGACCCAGGGCAGAGAGTGCAA...TGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR TCA 90 bp | TTACAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACCTCTCCACGTGCCTaGCTACATGGGTGTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LQAATSPSVHSRGALQMPTSPRA*LHGCCS Trigger: GCTACAACACCCATGTAGTCAGGCACGTGGAGAGGT...TGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR CCA 90 bp | CATGCAGTGCTGAACTTGAGCAGCTGGGGAAAAGGCATGCAGCTAACAGCGGTGCACATCCAGTTGCCCTaGGTTCCGCAGGGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HAVLNLSSWGKGMQLTAVHIQLP*VPQGSS Trigger: GCTGCTCCCCTGCGGAACCCAGGGCAACTGGATGTG...CACCGCTGTTAGCTGCATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR CCA 90 bp | TTACAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAATGGGGGTCTGCCTCTaGTCTTTTTCTCTCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LQAATSPSVHSRGALQMPMGVCL*SFSLLR Trigger: GCGCAGGAGAGAAAAAGACCAGAGGCAGACCCCCAT...TGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| 3UTR CAA 72 bp | ACAGTAGGGGCGCCCTCCAGATGCCAACACCACACCTaGGTTACTACAGAGGCGTCTCATGCTAGGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: TVGAPSRCQHHT*VTTEASHARLD Trigger: GTCCAGCCTAGCATGAGACGCCTCTGTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCTACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR GCA 90 bp | AGGGGCGCCCTCCAGATGCCAACACCACACCTTGGTTACTACAGAGGCGTCTCATCACACCTCTCCACGTaGCTGACTACATGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGALQMPTPHLGYYRGVSSHLST*LTTWVL Trigger: CAACACCCATGTAGTCAGGCACGTGGAGAGGTGTGA...TGAGACGCCTCTGTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR CCA 90 bp | TCACAAGGAGAAACCTTAAGGCATGCAGTGCTGAACTTGAGCAGCTGGGGAAAAACAGCGCACACAAGCTaGGCAGGGCCAGGAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQGETLRHAVLNLSSWGKTAHTS*AGPGAP Trigger: CGGCGCTCCTGGCCCTGCCCAGCTTGTGTGCGCTGT...TTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR TCA 90 bp | AGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCCACTGCATGACCTGGTaGCAGAGTGCACCAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRLPTFSTSESQAILWISHCMTW*QSAPGP Trigger: CGGGCCTGGTGCACTCTGTCACCAGGTCATGCAGTG...GCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR CCA 90 bp | TATTTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAACAGCGCACACAAGCTaGGCAGGGCCAGGAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YFPNHPKATANLFNFRIPTAHTS*AGPGAP Trigger: CGGCGCTCCTGGCCCTGCCCAGCTTGTGTGCGCTGT...TGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTGTGGAGCCGGAAACTCCGTaGCAGCGGCAGTCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TANLFNFRIPSNPLDQLVEPETP*QRQSTD Trigger: GTCTGTGGACTGCCGCTGCCACGGAGTTTCCGGCTC...CACAAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAGATGCCAACACCACACCTTGGTTACTACAGAGGCGTCTCATGCTAGGCTAGAAACTTTCTGCTaGACCACATGCCGTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSRCQHHTLVTTEASHARLETFC*TTCRTG Trigger: TCCAGTACGGCATGTGGTTCAGCAGAAAGTTTCTAG...CCTAGCATGAGACGCCTCTGTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR TCA 90 bp | AGGGGCGCCCTCCAGATGCCAACACCACACCTTGGTTACTACAGAGGCGTCTCATTCCTGTGGTGTTTCTaGTGGGAAGATCTAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RGALQMPTPHLGYYRGVSFLWCF*WEDLET Trigger: AGTTTCTAGATCTTCCCATCAGAAACACCACAGGAA...TGAGACGCCTCTGTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR TCA 90 bp | CATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACACCACACCTTGGTTACTCCTCTTGGTTTTGTCTaGGATCTGGATGCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQCTVGAPSRCQHHTLVTPLGFV*DLDAVF Trigger: GAAAACAGCATCCAGATCTCAGACAAAACCAAGAGG...AGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR GCA 90 bp | TCACAAGGAGAAACCTTAAGGCATGCAGTGCTGAACTTGAGCAGCTGGGGAAAAGGTACGGTTTCCTCTTaGACAGCTCCTTCTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQGETLRHAVLNLSSWGKGTVSS*TAPSGG Trigger: GCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACC...TTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR GCA 90 bp | GCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTGTCGGAACTGGCTTCTaGACTCCTGAATGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATANLFNFRIPSNPLDQLVGTGF*TPECPA Trigger: GGCTGGGCATTCAGGAGTGCAGAAGCCAGTTCCGAC...AAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTGTGTCCGGTTGCACTCTCTaGCCTGGGTCCCAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TANLFNFRIPSNPLDQLVSGCTL*PGSQES Trigger: GGATTCCTGGGACCCAGGGCAGAGAGTGCAACCGGA...CACAAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR TCA 90 bp | TTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCGTTGCCTGCACTGCATaGCCTGGTGACAGAGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPNHPKATANLFNFRIPSVACTA*PGDRVH Trigger: GTGCACTCTGTCACCAGGTCATGCAGTGCAGGCAAC...GCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR GCA 90 bp | AGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCGGTGAGCCACCATTCTaGAAGGTGGTGTCACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRLPTFSTSESQAILWISGEPPF*KVVSQE Trigger: TTCCTGTGACACCACCTTGCAGAATGGTGGCTCACC...GCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR CCA 90 bp | TTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCTTGCACAGCTCCTTCTaGCGGCTGTTCAGCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPNHPKATANLFNFRIPSLHSSF*RLFSGK Trigger: CTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAA...GCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| 3UTR CAA 72 bp | TCACAAGGAGAAACCTTAAGGCATGCAGTGCTGAACTaGAGCAGCTGGGGAAAAGGCATGCAGCTAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQGETLRHAVLN*SSWGKGMQLTA Trigger: CGCTGTTAGCTGCATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAATGGCTTCTGCACTCCTaGATGCCCAGCCTGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MVSETNWESEYLRSAVRKWLLHS*MPSLAP Trigger: GGGCGCCAGGCTGGGCATTCAGGAGTGCAGAAGCCA...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCATCCTTTAAACATAGTGATTTGATGCGCCCTGGTGATTTTCTTGAGCAGCACTGCATGACCTGGTaGCAGAGTGCACCAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FSSFKHSDLMRPGDFLEQHCMTW*QSAPGP Trigger: CGGGCCTGGTGCACTCTGTCACCAGGTCATGCAGTG...CTGCTCAAGAAAATCACCAGGGCGCATCAAATCACTATGTTTAAAGGATGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCATCCTTTAAACATAGTGATTTGATGCGCCCTGGTGATTTTCTTGAGCAGCCAACCACATCCAGTTaGCCTGGGTTCCGCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSSFKHSDLMRPGDFLEQPTTSS*PGFRRG Trigger: TCCCCTGCGGAACCCAGGGCAACTGGATGTGGTTGG...CTGCTCAAGAAAATCACCAGGGCGCATCAAATCACTATGTTTAAAGGATGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGGTACGGTTTCCTCTTaGACAGCTCCTTCTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISQIIQRRLPTFSTSESQGTVSS*TAPSGG Trigger: GCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACC...TTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR CCA 90 bp | TCACAAGGAGAAACCTTAAGGCATGCAGTGCTGAACTTGAGCAGCTGGGGAAAACACCATTCTGCAAGGTaGTGTCACAGGAACATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQGETLRHAVLNLSSWGKHHSAR*CHRNIR Trigger: CCGAATGTTCCTGTGACACCACCTTGCAGAATGGTG...TTTTCCCCAGCTGCTCAAGTTCAGCACTGCATGCCTTAAGGTTTCTCCTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTGTGAACATTCGGTCATGTTaGCTGCACTGCATGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TANLFNFRIPSNPLDQLVNIRSC*LHCMTW Trigger: CCAGGTCATGCAGTGCAGGCAACATGACCGAATGTT...CACAAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGGAATGAACATTCGGTCATGTTaGCTGCACTGCATGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQSPPGNIILGVITLGMNIRSC*LHCMTW Trigger: CCAGGTCATGCAGTGCAGGCAACATGACCGAATGTT...CATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCTGGCTAGCAGGACTCTaGTTTCTTTTCCTGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRRLPTFSTSESQAILWIWLAGL*FLFLWC Trigger: ACACCACAGGAAAAGAAAGCAGAGTCCTGCTAGCCA...GATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR TCA 90 bp | CAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTGTGATTTGACAGCAAGTCATCCTTaGGAATGGGGGTCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPFQLQNPKQSSGSACDLTASHP*EWGSAS Trigger: AGAGGCAGACCCCCATTCTCAAGGATGACTTGCTGT...CAAATCACAAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR GCA 90 bp | CTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGGAATGTGGCTAGCAGGACTCTaGTTTCTTTTCCTGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQSPPGNIILGVITLGMWLAGL*FLFLWC Trigger: ACACCACAGGAAAAGAAAGCAGAGTCCTGCTAGCCA...CATTCCTAAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR CCA 90 bp | TCATTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAACCACATGCCGTACTaGACATCATCCGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSQPITARQHYSWSHNFNHMPY*TSSEHP Trigger: AGGATGCTCGGATGATGTCCAGTACGGCATGTGGTT...AAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR TCA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAACCAGCCTTCACTTGGTaGGCCACCATTCTGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MVSETNWESEYLRSAVRKPAFTW*ATILQG Trigger: ACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGG...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTCTAGAAACTTTCTGCTaGACCACATGCCGTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSQPITARQHYSWSHNFLETFC*TTCRTG Trigger: TCCAGTACGGCATGTGGTTCAGCAGAAAGTTTCTAG...AAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR CCA 90 bp | CAACCTTTTCAACTTCAGAATCCCAAGCAATCCTCTGGATCAGCTTGTGATTTGCACCATTCTGCAAGGTaGTGTCACAGGAACATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QPFQLQNPKQSSGSACDLHHSAR*CHRNIR Trigger: CCGAATGTTCCTGTGACACCACCTTGCAGAATGGTG...CAAATCACAAGCTGATCCAGAGGATTGCTTGGGATTCTGAAGTTGAAAAGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR CCA 90 bp | CAATCCTCTGGATCAGCTTGTGATTTGAAGCCTGCCAGAAAGAAAGAAATCGTAAACCACATGCCGTACTaGACATCATCCGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSGSACDLKPARKKEIVNHMPY*TSSEHP Trigger: AGGATGCTCGGATGATGTCCAGTACGGCATGTGGTT...TACGATTTCTTTCTTTCTGGCAGGCTTCAAATCACAAGCTGATCCAGAGGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR GCA 90 bp | ATGGTGTCAGAAACCAATTGGGAATCAGAGTATTTAAGGTCAGCGGTTAGAAAAGGTGAGCCACCATTCTaGAAGGTGGTGTCACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MVSETNWESEYLRSAVRKGEPPF*KVVSQE Trigger: TTCCTGTGACACCACCTTGCAGAATGGTGGCTCACC...TTTTCTAACCGCTGACCTTAAATACTCTGATTCCCAATTGGTTTCTGACACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCATCCTTTAAACATAGTGATTTGATGCGCCCTGGTGATTTTCTTGAGCAGGATGGCATAAATGAATaGTGTCTCCTTGGTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSFKHSDLMRPGDFLEQDGINE*CLLGAA Trigger: AGCGGCACCAAGGAGACAGCATTCATTTATGCCATC...CTGCTCAAGAAAATCACCAGGGCGCATCAAATCACTATGTTTAAAGGATGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS-3UTR GCA 90 bp | TATCAATGTATATTTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTGATGGCATAAATGAATaGTGTCTCCTTGGTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YQCIFPKSSKGDCQPFQLDGINE*CLLGAA Trigger: AGCGGCACCAAGGAGACAGCATTCATTTATGCCATC...AAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAAATATACATTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAATACCCATAAATATTCCAAGTCACATTATTCCCAGAAGTTCTGCCCCTTCCTGTGGTGTTTCTaGTGGGAAGATCTAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KRNTHKYSKSHYSQKFCPFLWCF*WEDLET Trigger: AGTTTCTAGATCTTCCCATCAGAAACACCACAGGAA...GGGGCAGAACTTCTGGGAATAATGTGACTTGGAATATTTATGGGTATTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| 3UTR CAA 72 bp | CAGCTGCCTATTTTATTTCTTATAAACTGTCAGCGTTaGACTCTTAAATCATTGGCATTGATTCACCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPILFLINCQR*TLKSLALIHPE Trigger: TTCCGGGTGAATCAATGCCAATGATTTAAGAGTCAAACGCTGACAGTTTATAAGAAATAAAATAGGCAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
||
| CDS GCA 90 bp | CATCCAGTTGCCCTGGGTTCCGCAGGGGAGCAGCGACAGCACGGCTaGCCACAGCGCACACAAGCTGGGCAGGGCCAGGAGCGCCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPVALGSAGEQRQHG*PQRTQAGQGQERRS Trigger: AGAGCGGCGCTCCTGGCCCTGCCCAGCTTGTGTGCGCTGTGGGCAGCCGTGCTGTCGCTGCTCCCCTGCGGAACCCAGGGCAACTGGATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
||
| CDS-3UTR CAA 90 bp | TTACAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCACCTCCTGATGTCCGGTaGCACTCTCTGCCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQAATSPSVHSRGALQMPPPDVR*HSLPWV Trigger: GACCCAGGGCAGAGAGTGCAACCGGACATCAGGAGG...TGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTGTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS TCA 90 bp | ACCATACAGTTCCACCTCTCGTGTCGGAACTGGCTTCTGCACTCCTaGATGCCCAGCCTGGCGCCCTCGCGGATGCTAGGCAGCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TIQFHLSCRNWLLHS*MPSLAPSRMLGSRY Trigger: GTACCTGCTGCCTAGCATCCGCGAGGGCGCCAGGCTGGGCATTCAGGAGTGCAGAAGCCAGTTCCGACACGAGAGGTGGAACTGTATGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 ENSMUST00000176681.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACACCACACCTTGGTTACTACCCCAACCACATCCAGTaGCCCTGGGTTCCGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVHSRGALQMPTPHLGYYPNHIQ*PWVPQG Trigger: CCCCTGCGGAACCCAGGGCAACTGGATGTGGTTGGG...GTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR CAA 90 bp | TTACAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAAGTGCCAGCCTTCACTaGGTGAGCCACCATTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQAATSPSVHSRGALQMPSASLH*VSHHSA Trigger: TGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACT...TGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS GCA 90 bp | CACAGCAGAGGAGGTTACAGCCATCTGCGCCTCCTGATGTCCGGTTaGACTCTCTGCCCTGGGTCCCAGGAATCCCCAGTTTCTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSRGGYSHLRLLMSG*TLCPGSQESPVSCS Trigger: AGAACAAGAAACTGGGGATTCCTGGGACCCAGGGCAGAGAGTGCAACCGGACATCAGGAGGCGCAGATGGCTGTAACCTCCTCTGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS-3UTR CAA 90 bp | TCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACACCACACCTTGGTTACTACAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVHSRGALQMPTPHLGYYRYGFL*HSSFWR Trigger: CCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCT...GTAGTAACCAAGGTGTGGTGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
||
| CDS TCA 90 bp | CAAGGTGGTGTCACAGGAACATTCGGTCATGTTGCCTGCACTGCATaGCCTGGTGACAGAGTGCACCAGGCCCGCTGCCATGATGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: QGGVTGTFGHVACTA*PGDRVHQARCHDGI Trigger: TATGCCATCATGGCAGCGGGCCTGGTGCACTCTGTCACCAGGTCATGCAGTGCAGGCAACATGACCGAATGTTCCTGTGACACCACCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
||
| CDS GCA 90 bp | GAGCATCCTCCCCAGTGCCAGCCTTCACTTGGTGAGCCACCATTCTaGAAGGTGGTGTCACAGGAACATTCGGTCATGTTGCCTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: EHPPQCQPSLGEPPF*KVVSQEHSVMLPAL Trigger: CAGTGCAGGCAACATGACCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACTGGGGAGGATGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
||
| CDS CCA 90 bp | CTCCCCAGTGCCAGCCTTCACTTGGTGAGCCACCATTCTGCAAGGTaGTGTCACAGGAACATTCGGTCATGTTGCCTGCACTGCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: LPSASLHLVSHHSAR*CHRNIRSCCLHCMT Trigger: GGTCATGCAGTGCAGGCAACATGACCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
||
| CDS-3UTR CAA 90 bp | CATGCAGTGCTGAACTTGAGCAGCTGGGGAAAAGGCATGCAGCTAACAGCGGTGAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HAVLNLSSWGKGMQLTAVRYGFL*HSSFWR Trigger: CCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCT...CACCGCTGTTAGCTGCATGCCTTTTCCCCAGCTGCTCAAGTTCAGCACTGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR CAA 90 bp | CAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAACACTGCGCATTTTCCTCTaGGTTTTGTCTGAGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: QAATSPSVHSRGALQMPTLRIFL*VLSEIW Trigger: CCAGATCTCAGACAAAACCAAGAGGAAAATGCGCAG...TGTTGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS TCA 90 bp | CTGGACATCATCCGAGCATCCTCCCCAGTGCCAGCCTTCACTTGGTaGGCCACCATTCTGCAAGGTGGTGTCACAGGAACATTCGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LDIIRASSPVPAFTW*ATILQGGVTGTFGH Trigger: ATGACCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACTGGGGAGGATGCTCGGATGATGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS-3UTR CAA 90 bp | TTACAGGCAGCGACTTCCCCATCAGTGCACAGTAGGGGCGCCCTCCAGATGCCAATTTTCCTCTTGGTTTaGTCTGAGATCTGGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: LQAATSPSVHSRGALQMPIFLLV*SEIWML Trigger: CAGCATCCAGATCTCAGACAAAACCAAGAGGAAAAT...TGGCATCTGGAGGGCGCCCCTACTGTGCACTGATGGGGAAGTCGCTGCCTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CCA 90 bp | CTGATGGGAAGATCTAGAAACTTTCTGCTGAACCACATGCCGTACTaGACATCATCCGAGCATCCTCCCCAGTGCCAGCCTTCACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LMGRSRNFLLNHMPY*TSSEHPPQCQPSLG Trigger: ACCAAGTGAAGGCTGGCACTGGGGAGGATGCTCGGATGATGTCCAGTACGGCATGTGGTTCAGCAGAAAGTTTCTAGATCTTCCCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAAGCTCCACAGACATTAACTaGGCGACAGCCTGCCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: FPNHPKATANLFNFRIPSSTDIN*ATACRP Trigger: GGGGCGGCAGGCTGTCGCCAAGTTAATGTCTGTGGA...GCTTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR CAA 90 bp | TTCTCATCCTTTAAACATAGTGATTTGATGCGCCCTGGTGATTTTCTTGAGCAGCCCAACCACATCCAGTaGCCCTGGGTTCCGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: FSSFKHSDLMRPGDFLEQPNHIQ*PWVPQG Trigger: CCCCTGCGGAACCCAGGGCAACTGGATGTGGTTGGG...CTGCTCAAGAAAATCACCAGGGCGCATCAAATCACTATGTTTAAAGGATGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR CAA 90 bp | TCATTCTCTCAGCCAATCACCGCCCGGCAACATTATTCTTGGAGTCATAACTTTAGTGCCAGCCTTCACTaGGTGAGCCACCATTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SFSQPITARQHYSWSHNFSASLH*VSHHSA Trigger: TGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACT...AAAGTTATGACTCCAAGAATAATGTTGCCGGGCGGTGATTGGCTGAGAGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS-3UTR CAA 90 bp | TATTTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAGAACATTCGGTCATGTaGCCTGCACTGCATGACCTG | + |
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Preference number: 5 (lower is better) Translates to: YFPNHPKATANLFNFRIPEHSVM*PALHDL Trigger: CAGGTCATGCAGTGCAGGCAACATGACCGAATGTTC...TGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS-3UTR CAA 90 bp | ATTTCCCAAATCATCCAAAGGCGACTGCCAACCTTTTCAACTTCAGAATCCCAATACAGCAAGTCATCCTaGAGAATGGGGGTCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: ISQIIQRRLPTFSTSESQYSKSS*RMGVCL Trigger: GAGGCAGACCCCCATTCTCAAGGATGACTTGCTGTA...TTGGGATTCTGAAGTTGAAAAGGTTGGCAGTCGCCTTTGGATGATTTGGGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS GCA 72 bp | GCCCTGGGTTCCGCAGGGGAGCAGCGACAGCACGGCTaGCCACAGCGCACACAAGCTGGGCAGGGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ALGSAGEQRQHG*PQRTQAGQGQE Trigger: CTCCTGGCCCTGCCCAGCTTGTGTGCGCTGTGGGCAGCCGTGCTGTCGCTGCTCCCCTGCGGAACCCAGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CCA 72 bp | CCGAAAGAGGCGATGCCCAACCACATCCAGTTGCCCTaGGTTCCGCAGGGGAGCAGCGACAGCACGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PKEAMPNHIQLP*VPQGSSDSTAA Trigger: GGCAGCCGTGCTGTCGCTGCTCCCCTGCGGAACCCAGGGCAACTGGATGTGGTTGGGCATCGCCTCTTTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CAA 90 bp | AGCCTGGCGCCCTCGCGGATGCTAGGCAGCAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAGTCGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLAPSRMLGSRYGFL*HSSFWRLFSGKSAQ Trigger: CTGCGCCGACTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCTAGCATCCGCGAGGGCGCCAGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS GCA 72 bp | CGCAGCCCAGCTTCTCCGGTACCCCGAAAGAGGCGATaGCCAACCACATCCAGTTGCCCTGGGTTCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSPASPVPRKRR*PTTSSCPGFRR Trigger: CCTGCGGAACCCAGGGCAACTGGATGTGGTTGGGCATCGCCTCTTTCGGGGTACCGGAGAAGCTGGGCTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS TCA 72 bp | GCCACAGCAGAGGAGGTTACAGCCATCTGCGCCTCCTaGTGTCCGGTTGCACTCTCTGCCCTGGGTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATAEEVTAICAS*CPVALSALGPR Trigger: CCTGGGACCCAGGGCAGAGAGTGCAACCGGACATCAGGAGGCGCAGATGGCTGTAACCTCCTCTGCTGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 72 bp | CCCTCGCGGATGCTAGGCAGCAGGTACGGTTTCCTCTaGCACAGCTCCTTCTGGCGGCTGTTCAGCGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PSRMLGSRYGFL*HSSFWRLFSGK Trigger: CTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCTAGCATCCGCGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS GCA 72 bp | GGAGGTTACAGCCATCTGCGCCTCCTGATGTCCGGTTaGACTCTCTGCCCTGGGTCCCAGGAATCCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GGYSHLRLLMSG*TLCPGSQESPV Trigger: AACTGGGGATTCCTGGGACCCAGGGCAGAGAGTGCAACCGGACATCAGGAGGCGCAGATGGCTGTAACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 72 bp | AGGAGGTTACAGCCATCTGCGCCTCCTGATGTCCGGTaGCACTCTCTGCCCTGGGTCCCAGGAATCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RRLQPSAPPDVR*HSLPWVPGIPS Trigger: ACTGGGGATTCCTGGGACCCAGGGCAGAGAGTGCAACCGGACATCAGGAGGCGCAGATGGCTGTAACCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 72 bp | GAAACTCCGTGGCAGCGGCAGTCCACAGACATTAACTaGGCGACAGCCTGCCGCCCCGCTTCGTTGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: ETPWQRQSTDIN*ATACRPASLLC Trigger: ACACAACAACGAAGCGGGGCGGCAGGCTGTCGCCAAGTTAATGTCTGTGGACTGCCGCTGCCACGGAGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 90 bp | CAGGAGCCGGAAACTCCGTGGCAGCGGCAGTCCACAGACATTAACTaGGCGACAGCCTGCCGCCCCGCTTCGTTGTTGTGTAGATTCATG | + |
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Preference number: 6 (lower is better) Translates to: QEPETPWQRQSTDIN*ATACRPASLLCRFM Trigger: CATGAATCTACACAACAACGAAGCGGGGCGGCAGGCTGTCGCCAAGTTAATGTCTGTGGACTGCCGCTGCCACGGAGTTTCCGGCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 90 bp | CCACAGCAGAGGAGGTTACAGCCATCTGCGCCTCCTGATGTCCGGTaGCACTCTCTGCCCTGGGTCCCAGGAATCCCCAGTTTCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: PQQRRLQPSAPPDVR*HSLPWVPGIPSFLF Trigger: GAACAAGAAACTGGGGATTCCTGGGACCCAGGGCAGAGAGTGCAACCGGACATCAGGAGGCGCAGATGGCTGTAACCTCCTCTGCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 90 bp | GAGCCACCATTCTGCAAGGTGGTGTCACAGGAACATTCGGTCATGTaGCCTGCACTGCATGACCTGGTGACAGAGTGCACCAGGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: EPPFCKVVSQEHSVM*PALHDLVTECTRPA Trigger: AGCGGGCCTGGTGCACTCTGTCACCAGGTCATGCAGTGCAGGCAACATGACCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS TCA 72 bp | GTCACAGGAACATTCGGTCATGTTGCCTGCACTGCATaGCCTGGTGACAGAGTGCACCAGGCCCGCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VTGTFGHVACTA*PGDRVHQARCH Trigger: ATGGCAGCGGGCCTGGTGCACTCTGTCACCAGGTCATGCAGTGCAGGCAACATGACCGAATGTTCCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CCA 72 bp | AAACTCCGTGGCAGCGGCAGTCCACAGACATTAACTTaGCGACAGCCTGCCGCCCCGCTTCGTTGTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: KLRGSGSPQTLT*RQPAAPLRCCV Trigger: TACACAACAACGAAGCGGGGCGGCAGGCTGTCGCCAAGTTAATGTCTGTGGACTGCCGCTGCCACGGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 72 bp | CATCATCCGAGCATCCTCCCCAGTGCCAGCCTTCACTaGGTGAGCCACCATTCTGCAAGGTGGTGTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: HHPSILPSASLH*VSHHSARWCHR Trigger: CCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACTGGGGAGGATGCTCGGATGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CAA 90 bp | CGTACTGGACATCATCCGAGCATCCTCCCCAGTGCCAGCCTTCACTaGGTGAGCCACCATTCTGCAAGGTGGTGTCACAGGAACATTCGG | + |
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Preference number: 6 (lower is better) Translates to: RTGHHPSILPSASLH*VSHHSARWCHRNIR Trigger: CCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACTGGGGAGGATGCTCGGATGATGTCCAGTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS TCA 72 bp | ATCCGAGCATCCTCCCCAGTGCCAGCCTTCACTTGGTaGGCCACCATTCTGCAAGGTGGTGTCACAGGAACA | + |
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Preference number: 6 (lower is better) Translates to: IRASSPVPAFTW*ATILQGGVTGT Trigger: TGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACTGGGGAGGATGCTCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS GCA 72 bp | GTGCACCAGGCCCGCTGCCATGATGGCATAAATGAATaGTGTCTCCTTGGTGCCGCTACTCAGCTCATAGCC | + |
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Preference number: 6 (lower is better) Translates to: VHQARCHDGINE*CLLGAATQLIA Trigger: GGCTATGAGCTGAGTAGCGGCACCAAGGAGACAGCATTCATTTATGCCATCATGGCAGCGGGCCTGGTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CCA 72 bp | CAGCAGGTTTTCACAGCACAGGAGCCGGAAACTCCGTaGCAGCGGCAGTCCACAGACATTAACTTGGCGACA | + |
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Preference number: 6 (lower is better) Translates to: QQVFTAQEPETP*QRQSTDINLAT Trigger: TGTCGCCAAGTTAATGTCTGTGGACTGCCGCTGCCACGGAGTTTCCGGCTCCTGTGCTGTGAAAACCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS GCA 72 bp | CCCCAGTGCCAGCCTTCACTTGGTGAGCCACCATTCTaGAAGGTGGTGTCACAGGAACATTCGGTCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: PQCQPSLGEPPF*KVVSQEHSVML Trigger: CAACATGACCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CCA 72 bp | GCCAGCCTTCACTTGGTGAGCCACCATTCTGCAAGGTaGTGTCACAGGAACATTCGGTCATGTTGCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: ASLHLVSHHSAR*CHRNIRSCCLH Trigger: GTGCAGGCAACATGACCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CAA 72 bp | GAAACTCCGTGGCAGCGGCAGTCCACAGACATTAACTaGGCGACAGCCGCTACTCAGCTCATAGCCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ETPWQRQSTDIN*ATAATQLIAKE Trigger: CTCTTTGGCTATGAGCTGAGTAGCGGCTGTCGCCAAGTTAATGTCTGTGGACTGCCGCTGCCACGGAGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176681.2 |
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| CDS CAA 72 bp | TTCTGCAAGGTGGTGTCACAGGAACATTCGGTCATGTaGCCTGCACTGCATGACCTGGTGACAGAGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: FCKVVSQEHSVM*PALHDLVTECT Trigger: GGTGCACTCTGTCACCAGGTCATGCAGTGCAGGCAACATGACCGAATGTTCCTGTGACACCACCTTGCAGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CAA 72 bp | GACATTAACTTGGCGACAGCCTGCCGCCCCGCTTCGTaGTTGTGTAGATTCATGGCTAGCAGGACTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: DINLATACRPAS*LCRFMASRTLL Trigger: AAGCAGAGTCCTGCTAGCCATGAATCTACACAACAACGAAGCGGGGCGGCAGGCTGTCGCCAAGTTAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CCA 72 bp | AGATCTAGAAACTTTCTGCTGAACCACATGCCGTACTaGACATCATCCGAGCATCCTCCCCAGTGCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSRNFLLNHMPY*TSSEHPPQCQP Trigger: AGGCTGGCACTGGGGAGGATGCTCGGATGATGTCCAGTACGGCATGTGGTTCAGCAGAAAGTTTCTAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031681.10 ENSMUST00000128245.8 ENSMUST00000148639.2 |
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| CDS CAA 90 bp | TCCACAGACATTAACTTGGCGACAGCCTGCCGCCCCGCTTCGTTGTaGTGTAGATTCATGGCTAGCAGGACTCTGCTTTCTTTTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: STDINLATACRPASL*CRFMASRTLLSFPV Trigger: CACAGGAAAAGAAAGCAGAGTCCTGCTAGCCATGAATCTACACAACAACGAAGCGGGGCGGCAGGCTGTCGCCAAGTTAATGTCTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 90 bp | CAGTCCACAGACATTAACTTGGCGACAGCCTGCCGCCCCGCTTCGTaGTTGTGTAGATTCATGGCTAGCAGGACTCTGCTTTCTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QSTDINLATACRPAS*LCRFMASRTLLSFP Trigger: AGGAAAAGAAAGCAGAGTCCTGCTAGCCATGAATCTACACAACAACGAAGCGGGGCGGCAGGCTGTCGCCAAGTTAATGTCTGTGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS TCA 72 bp | AGTTGGGAGACTTATGAACGTACAGCAAGTCATCCTTaGGAATGGGGGTCTGCCTCTGGTCTTTTTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SWETYERTASHP*EWGSASGLFLS Trigger: GGAGAGAAAAAGACCAGAGGCAGACCCCCATTCTCAAGGATGACTTGCTGTACGTTCATAAGTCTCCCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031681.10 |
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| CDS CAA 72 bp | AATTTCCCAATACATACCTGCCGCCCCGCTTCGTTGTaGTGTAGATTCATGGCTAGCAGGACTCTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: NFPIHTCRPASL*CRFMASRTLLS Trigger: AGAAAGCAGAGTCCTGCTAGCCATGAATCTACACAACAACGAAGCGGGGCGGCAGGTATGTATTGGGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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| CDS CAA 72 bp | TTCAATTTCCCAATACATACCTGCCGCCCCGCTTCGTaGTTGTGTAGATTCATGGCTAGCAGGACTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FNFPIHTCRPAS*LCRFMASRTLL Trigger: AAGCAGAGTCCTGCTAGCCATGAATCTACACAACAACGAAGCGGGGCGGCAGGTATGTATTGGGAAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128245.8 |
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