Pregenerated sensors for WNT11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015957Ensembl transcript IDs: ENSMUST00000067495.9, ENSMUST00000163913.8, ENSMUST00000165122.8, ENSMUST00000165240.2, ENSMUST00000167303.8
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGAGGTTGTCCGCACATCCTCCCCAGCGGTTCCCGGGCCCGGGTaGCTCACCTGGGACGGGGCCGCAGGAGCAGCCGGGCAGGTCGCC | + |
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Preference number: 1 (lower is better) Translates to: AEVVRTSSPAVPGPG*LTWDGAAGAAGQVA Trigger: GGCGACCTGCCCGGCTGCTCCTGCGGCCCCGTCCCAGGTGAGCCACCCGGGCCCGGGAACCGCTGGGGAGGATGTGCGGACAACCTCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR CCA 90 bp | GGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTaGAGGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATC | + |
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Preference number: 1 (lower is better) Translates to: GSPRATRPPGVVSSK*RHSTSRLPRLASGI Trigger: GATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR CCA 90 bp | GGAGGACCGGGTGGGGCTGGGACATCAATGGGAGGCCGCCTTGCCTaGAAACTGAAGAGTCCTCCTGCCAGCCCAGGATCTGCTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: GGPGGAGTSMGGRLA*KLKSPPASPGSAGV Trigger: GACCCCAGCAGATCCTGGGCTGGCAGGAGGACTCTTCAGTTTCCAGGCAAGGCGGCCTCCCATTGATGTCCCAGCCCCACCCGGTCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR CCA 90 bp | ATACAGGGAAACGGGCCAGGACCAGGTCGGAGGACCGGGTGGGGCTaGGACATCAATGGGAGGCCGCCTTGCCTGGAAACTGAAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: IQGNGPGPGRRTGWG*DINGRPPCLETEES Trigger: GGACTCTTCAGTTTCCAGGCAAGGCGGCCTCCCATTGATGTCCCAGCCCCACCCGGTCCTCCGACCTGGTCCTGGCCCGTTTCCCTGTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR TCA 90 bp | CAAGTGTTTGCGGGTGCCCATAGGCCGGTGTACCACCTTCGTGGCTaGCAGGTAGCGGGTCTTGAGGTCAGCAGCCACGTCCTGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: QVFAGAHRPVYHLRG*QVAGLEVSSHVLEL Trigger: GAGCTCCAGGACGTGGCTGCTGACCTCAAGACCCGCTACCTGTCAGCCACGAAGGTGGTACACCGGCCTATGGGCACCCGCAAACACTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR CCA 90 bp | GATCACATACAGGGAAACGGGCCAGGACCAGGTCGGAGGACCGGGTaGGGCTGGGACATCAATGGGAGGCCGCCTTGCCTGGAAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: DHIQGNGPGPGRRTG*GWDINGRPPCLETE Trigger: TTCAGTTTCCAGGCAAGGCGGCCTCCCATTGATGTCCCAGCCCCACCCGGTCCTCCGACCTGGTCCTGGCCCGTTTCCCTGTATGTGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR CCA 90 bp | GTGTACCTCTCTCCAGGTCAAGCAGGTAGTTGGGGGCGAGCTCGATaGAGGAGCAGTTCCAGCGCATGTCAGCGAAGGCCCTACGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VYLSPGQAGSWGRAR*RSSSSACQRRPYGR Trigger: CCTGCCGTAGGGCCTTCGCTGACATGCGCTGGAACTGCTCCTCCATCGAGCTCGCCCCCAACTACCTGCTTGACCTGGAGAGAGGTACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR GCA 90 bp | GACATCAATGGGAGGCCGCCTTGCCTGGAAACTGAAGAGTCCTCCTaGCAGCCCAGGATCTGCTGGGGTCACTTGAGGAGGGCAGAGATT | + |
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Preference number: 1 (lower is better) Translates to: DINGRPPCLETEESS*QPRICWGHLRRAEI Trigger: AATCTCTGCCCTCCTCAAGTGACCCCAGCAGATCCTGGGCTGGCAGGAGGACTCTTCAGTTTCCAGGCAAGGCGGCCTCCCATTGATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR GCA 90 bp | GTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTaGCCTGACTTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: VFLALKGQMHSLTHP*PDFLEQPGRQHVGT Trigger: AGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
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| 3UTR GCA 90 bp | CACCAAAAACCTACCAGGGCGGCCTCCCTAAGGTCTCAGCTTTCTTaGAGCAAGCTTAATGGGTCTGAAACCATGGCCAATGGCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: HQKPTRAASLRSQLS*SKLNGSETMANGCA Trigger: AGCACAGCCATTGGCCATGGTTTCAGACCCATTAAGCTTGCTGCAAGAAAGCTGAGACCTTAGGGAGGCCGCCCTGGTAGGTTTTTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR TCA 90 bp | ATACTGCCAACTAGGGTTATGTTTCAAGACGTCTGTCCTCACCCTTaGCCAACAGATCACATACAGGGAAACGGGCCAGGACCAGGTCGG | + |
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Preference number: 1 (lower is better) Translates to: ILPTRVMFQDVCPHP*PTDHIQGNGPGPGR Trigger: CCGACCTGGTCCTGGCCCGTTTCCCTGTATGTGATCTGTTGGTCAAGGGTGAGGACAGACGTCTTGAAACATAACCCTAGTTGGCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR GCA 90 bp | ACTGCCTGTCTTGGGTCCCATGGGATCCCACCTTCTCATTCTTCATaGAGAAGTCAGGGGAGCTCTGTAGATACACAAGTTCTGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: TACLGSHGIPPSHSS*RSQGSSVDTQVLSP Trigger: AGGACTCAGAACTTGTGTATCTACAGAGCTCCCCTGACTTCTGCATGAAGAATGAGAAGGTGGGATCCCATGGGACCCAAGACAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR CCA 90 bp | GTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTaGGCAAGTTCAGGAAACCTAAAGAAGTTTGCTGGCTGGCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: VNFIFLLFACWMLLG*ASSGNLKKFAGWLD Trigger: ATCCAGCCAGCCAGCAAACTTCTTTAGGTTTCCTGAACTTGCCCAACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGGGCGATGGTGTGACTaGTGGTGGCGGCCGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: PRLSQGDQASWCGVFQVEGRWCD*WWRPTG Trigger: CCCTGTCGGCCGCCACCATCAGTCACACCATCGCCC...CTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACCACCCGGGTGGCTCACCTaGGACGGGGCCGCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QHKPPPTPGIWHLQGSPPPGWLT*DGAAGA Trigger: TGCTCCTGCGGCCCCGTCCCAGGTGAGCCACCCGGG...TGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACAGGCAGGTCGCCAGAGGTaGAGGCCCGGGCGATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LSQGDQASWCGVFQVEAQAGRQR*RPGRWC Trigger: ACACCATCGCCCGGGCCTGCACCTCTGGCGACCTGC...CTGTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACCAAGGTCGTAGCGCTCCACCGTaGGCTCACACCTGCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TSRLPRLASGICREVHQGRSAPP*AHTCGR Trigger: CCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACG...ACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCAAGGTCTCTAGGCCCTTaGGTGGGTCCTCAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RLSQGDQASWCGVFQVEARSLGP*VGPQRS Trigger: GCTCCTCTGAGGACCCACTCAAGGGCCTAGAGACCT...TGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCATACCCATCCCTGCCCTaGCTTCTTGGAGCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLSQGDQASWCGVFQVEAYPSLP*LLGAAW Trigger: CCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTA...TGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTCCAGGCCTCCTGGTGTaGTGTCTTCCAAGTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EAPALPGRPGLLVWCLPSPGLLV*CLPSGG Trigger: GCCTCCACTTGGAAGACACCACACCAGGAGGCCTGG...ACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAGGCCCACCATTCAGGGTCCCACCAAAAACCTACCAGGGCGGCCTCCCTGGCGACCAGGCCTCCTaGTGTGGTGTCTTCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GPGPPFRVPPKTYQGGLPGDQAS*CGVFQV Trigger: CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCC...AGGGAGGCCGCCCTGGTAGGTTTTTGGTGGGACCCTGAATGGTGGGCCTGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTCTGGAAGGCAACATGTaGGCACTCAGGCCCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: EAPALPGRPGLLVWCLPSLEGNM*ALRPQA Trigger: AGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAG...ACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGCCTGCCCTGACTTCTTaGAGCAGCCTGGAAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: PRLSQGDQASWCGVFQVEPALTS*SSLEGN Trigger: GTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGG...CTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCAGACGTAGCGCTCCACCGTGCGCTCACACCTGCGGCAGGTGACGTAGCAAGGTCTCTAGGCCCTTaGGTGGGTCCTCAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LADVALHRALTPAAGDVARSLGP*VGPQRS Trigger: GCTCCTCTGAGGACCCACTCAAGGGCCTAGAGACCT...TGCTACGTCACCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACGTCTGCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACAGACAGGTAGCGGGTCTTaGGGTCAGCAGCCACGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSQGDQASWCGVFQVEAQTGSGS*GQQPRP Trigger: AGGACGTGGCTGCTGACCTCAAGACCCGCTACCTGT...CTGTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCTGGCATCTGGCATCTaGAGGGAAGTCCACCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PGSPRATRPPGVVSSKWRLASGI*REVHQG Trigger: ACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAG...CCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCACTCAGGCCCCAGGCTGCCAGGCCCCTTCCAACAGGTaGGGATGGAGCAGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLEQPGRQHVGTQAPGCQAPSNR*GWSRSQ Trigger: CTGGCTCCTGCTCCATCCGCACCTGTTGGAAGGGGC...CTGGCAGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCAGGCCTCCTGGTGTaGTGTCTTCCAAGTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EAQHKPPPTPGIWHLQGSPGLLV*CLPSGG Trigger: GCCTCCACTTGGAAGACACCACACCAGGAGGCCTGG...ACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCAGACGTAGCGCTCCACCGTGCGCTCACACCTGCGGCAGGTGACGTAGCAGGCGACCAGGCCTCCTaGTGTGGTGTCTTCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LADVALHRALTPAAGDVAGDQAS*CGVFQV Trigger: CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCC...TGCTACGTCACCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACGTCTGCAAG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGACATCGCTCCACCACTCTGTCCGTGTAGGGGTTGTAGCCGCGCCCACAGCAGGTCTCTAGGCCCTTaGGTGGGTCCTCAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SDIAPPLCPCRGCSRAHSRSLGP*VGPQRS Trigger: GCTCCTCTGAGGACCCACTCAAGGGCCTAGAGACCT...GCTGTGGGCGCGGCTACAACCCCTACACGGACAGAGTGGTGGAGCGATGTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAGGCCCACCATTCAGGGTCCCACCAAAAACCTACCAGGGCGGCCTCCCTAATGGGAGGCCGCCTTaGCTGGAAACTGAAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GPGPPFRVPPKTYQGGLPNGRPP*LETEES Trigger: GGACTCTTCAGTTTCCAGGCAAGGCGGCCTCCCATT...AGGGAGGCCGCCCTGGTAGGTTTTTGGTGGGACCCTGAATGGTGGGCCTGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACCACCTGCCCTGACTTCTTaGAGCAGCCTGGAAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: QHKPPPTPGIWHLQGSPPPALTS*SSLEGN Trigger: GTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGG...TGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCATATGGTCTCACTTGCAGACGTAGCGCTCCACCGTGCGCTCACACCTGCGGGTCAAGCAGGTAGTTaGGGGCGAGCTCGATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GHMVSLADVALHRALTPAGQAGS*GRARWR Trigger: CCTCCATCGAGCTCGCCCCCAACTACCTGCTTGACC...CGCAGGTGTGAGCGCACGGTGGAGCGCTACGTCTGCAAGTGAGACCATATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCAGACGTAGCGCTCCACCGTGCGCTCACACCTGCGGCAGGTGACGTAGCATTGCACTGCCTGTCTTaGGTCCCATGGGATCCCACC | + |
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Preference number: 2 (lower is better) Translates to: LADVALHRALTPAAGDVALHCLS*VPWDPT Trigger: GGTGGGATCCCATGGGACCCAAGACAGGCAGTGCAA...TGCTACGTCACCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACGTCTGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR CAA 90 bp | GAGTCCTTCACAGGCCGGATATCCAGGTCCTTGGGCACCAAGTGTTaGCGGGTGCCCATAGGCCGGTGTACCACCTTCGTGGCTGACAGG | + |
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Preference number: 2 (lower is better) Translates to: ESFTGRISRSLGTKC*RVPIGRCTTFVADR Trigger: CCTGTCAGCCACGAAGGTGGTACACCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAAGGACCTGGATATCCGGCCTGTGAAGGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR CCA 90 bp | CGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCAAGTGGTTCCATGTGGTaGGCACAGGGTCCCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RLSQGDQASWCGVFQVEASGSMW*AQGPKE Trigger: TTCTTTGGGACCCTGTGCCCACCACATGGAACCACT...TGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACGGTCTTTCTGGCCTTaGAAGGTCAAATGCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: RLSQGDQASWCGVFQVEARSFWP*KVKCTV Trigger: GACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCG...TGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCACTCAGGCTGGAAGGCAACATGTaGGCACTCAGGCCCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: IPALTSWSSLEGNMWALRLEGNM*ALRPQA Trigger: AGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAG...CCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAGCCCGGGCGATGGTGTaGCTGATGGTGGCGGCCGAC | + |
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Preference number: 2 (lower is better) Translates to: TGSQRTFQKAGLSGLERSARAMV*LMVAAD Trigger: GTCGGCCGCCACCATCAGTCACACCATCGCCCGGGC...TGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTGGGCACCAAGTGTTTGCGGGTGCCCATAGGCCGGTGTACCACCTTCGTGCTGGCATCTGGCATCTaGAGGGAAGTCCACCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SLGTKCLRVPIGRCTTFVLASGI*REVHQG Trigger: ACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAG...CACGAAGGTGGTACACCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR GCA 90 bp | ATATCCAGGTCCTTGGGCACCAAGTGTTTGCGGGTGCCCATAGGCCGGTGTACCACGTCCTGGAGCTCTTaGAGCCCCTTCCAACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ISRSLGTKCLRVPIGRCTTSWSS*SPFQQV Trigger: CACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGT...GGTACACCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAAGGACCTGGATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACCAAGGTCTGTCTTGGGTCCCATaGGATCCCACCTTCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: TSRLPRLASGICREVHQGLSWVP*DPTFSF Trigger: GAATGAGAAGGTGGGATCCCATGGGACCCAAGACAG...ACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCGCGCCCACAGCACATaGGGTCGCAGCTGTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: KPVFLALKGQMHSLTHPCRAHST*GRSCHC Trigger: GCAGTGACAGCTGCGACCTCATGTGCTGTGGGCGCG...GCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| 3UTR-3UTR GCA 90 bp | TTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCAACTGAAGAGTCCTCCTaGCAGCCCAGGATCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LPIPALTSWSSLEGNMWATEESS*QPRICW Trigger: CCAGCAGATCCTGGGCTGGCAGGAGGACTCTTCAGT...TGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGGATGCCTTTGGAGACCCAGCTCTGAAACTGCAAGGCCAGGCTGGAGGCCAACGGCCTCCAGCCTATTaGCAGACATCACAAACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: EDAFGDPALKLQGQAGGQRPPAY*QTSQTG Trigger: GCCTGTTTGTGATGTCTGCCAATAGGCTGGAGGCCG...TTGGCCTCCAGCCTGGCCTTGCAGTTTCAGAGCTGGGTCTCCAAAGGCATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CAA 90 bp | AGATACACAAGTTCTGAGTCCTTCACAGGCCGGATATCCAGGTCCTaGGGCACCAAGTGTTTGCGGGTGCCCATAGGCCGGTGTACCACC | + |
|
Preference number: 2 (lower is better) Translates to: RYTSSESFTGRISRS*GTKCLRVPIGRCTT Trigger: GGTGGTACACCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAAGGACCTGGATATCCGGCCTGTGAAGGACTCAGAACTTGTGTATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACAGAAAGAGGGATTGAAGTaGGCCACCCCAAAGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSQGDQASWCGVFQVEAQKEGLK*ATPKKK Trigger: CTTTTTCTTTGGGGTGGCTCACTTCAATCCCTCTTT...CTGTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCGCCCCTTCCAACAGGTaGGGATGGAGCAGGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KPVFLALKGQMHSLTHPCAPSNR*GWSRSQ Trigger: CTGGCTCCTGCTCCATCCGCACCTGTTGGAAGGGGC...GCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATCGTAGCGCTCCACCGTaGGCTCACACCTGCGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GSQRTFQKAGLSGLERSNRSAPP*AHTCGR Trigger: CCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACG...ATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGGCGACCAGGCCTCCTaGTGTGGTGTCTTCCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KVKCTVLPIPALTSWSSLGDQAS*CGVFQV Trigger: CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCC...CAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGTGGGGGCGAGCTCGATaGAGGAGCAGTTCCAGCGCA | + |
|
Preference number: 2 (lower is better) Translates to: LALKGQMHSLTHPCPDFLWGRAR*RSSSSA Trigger: TGCGCTGGAACTGCTCCTCCATCGAGCTCGCCCCCA...CAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACCATATATAAAGAGGGATTaGAGTGAGCCACCCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QHKPPPTPGIWHLQGSPPYIKRD*SEPPQR Trigger: TCTTTGGGGTGGCTCACTTCAATCCCTCTTTATATA...TGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCAGCCCTGTTCGGGCATaGGCTGTGAGCCTGGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FLALKGQMHSLTHPCPDFSPVRA*AVSLGL Trigger: AAGGCCCAGGCTCACAGCTCATGCCCGAACAGGGCT...GAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGAGGTCTCTAGGCCCTTaGGTGGGTCCTCAGAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LKGQMHSLTHPCPDFLEQRSLGP*VGPQRS Trigger: GCTCCTCTGAGGACCCACTCAAGGGCCTAGAGACCT...CTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGGCCTTGCCTGGAAACTaGAGAGTCCTCCTGCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LKGQMHSLTHPCPDFLEQALPGN*RVLLPA Trigger: GGCTGGCAGGAGGACTCTTCAGTTTCCAGGCAAGGC...CTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGAAGTCAGGGGAGCTCTGTAGATACACAAGTTCTGAGTCCTTCACAGGCCGTGGTGTCTTCCAAGTaGAGGCACAGCACAAGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: CRSQGSSVDTQVLSPSQAVVSSK*RHSTSR Trigger: GCGGCTTGTGCTGTGCCTCCACTTGGAAGACACCAC...GGCCTGTGAAGGACTCAGAACTTGTGTATCTACAGAGCTCCCCTGACTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGGGCAAGTTCAGGAAACCTAAAGAAGTTTGCTGGCTGGCTGGATGCAAAGCCTGCCCTGACTTCTTaGAGCAGCCTGGAAGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GWASSGNLKKFAGWLDAKPALTS*SSLEGN Trigger: GTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGG...CTTTGCATCCAGCCAGCCAGCAAACTTCTTTAGGTTTCCTGAACTTGCCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | TCGGCCTCCAGCCTATTGGCAGACATCACAAACAGGCCAGGTCCTTCTGGCTTGGATTTGGGGGCAGATTaGGGCTTGCTCAGCATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SASSLLADITNRPGPSGLDLGAD*GLLSIY Trigger: ATAAATGCTGAGCAAGCCCCAATCTGCCCCCAAATC...CAAGCCAGAAGGACCTGGCCTGTTTGTGATGTCTGCCAATAGGCTGGAGGCCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGGGAGGCCGCCTTGCCTaGAAACTGAAGAGTCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LKGQMHSLTHPCPDFLEQGGRLA*KLKSPP Trigger: AGGAGGACTCTTCAGTTTCCAGGCAAGGCGGCCTCC...CTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CAA 90 bp | GCACAGGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTaGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: AQGPKEHSRKPVFLA*KGQMHSLTHPCPDF Trigger: GAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGTGGAATTGAAGATCTGCCTAAGACACGAAAGAACAAGTGGTTCCCCGAGGAGTCCCCCAGCTCTTaGCTTCTCCTGGGCTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LSGIEDLPKTRKNKWFPEESPSS*LLLGCP Trigger: GGGACAGCCCAGGAGAAGGCAAGAGCTGGGGGACTC...CTCGGGGAACCACTTGTTCTTTCGTGTCTTAGGCAGATCTTCAATTCCACTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTGGGGGTCGGAGGACCGGGTaGGGCTGGGACATCAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: QELTLFSCYLPAGCCWVGGRRTG*GWDING Trigger: CCCATTGATGTCCCAGCCCCACCCGGTCCTCCGACC...CCCAACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCATCTGCTGGGGTCACTTaGGGAGGGCAGAGATTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SQRTFQKAGLSGLERSNASAGVT*GGQRFG Trigger: CCCAAATCTCTGCCCTCCTCAAGTGACCCCAGCAGA...TGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATCTGGCATCTGGCATCTaGAGGGAAGTCCACCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: GSQRTFQKAGLSGLERSNLASGI*REVHQG Trigger: ACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAG...ATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACCTGCCCTGACTTCTTaGAGCAGCCTGGAAGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SQRTFQKAGLSGLERSNAPALTS*SSLEGN Trigger: GTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGG...TGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAGTCAGGGGAGCTCTGTAGATACACAAGTTCTGAGTCCTTCACAGGCCGGAAAGAGGGATTGAAGTaGGCCACCCCAAAGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QKSGELCRYTSSESFTGRKEGLK*ATPKKK Trigger: CTTTTTCTTTGGGGTGGCTCACTTCAATCCCTCTTT...CCGGCCTGTGAAGGACTCAGAACTTGTGTATCTACAGAGCTCCCCTGACTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACTGGCATCTGGCATCTaGAGGGAAGTCCACCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SQRTFQKAGLSGLERSNALASGI*REVHQG Trigger: ACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAG...TGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTCATGGGAGTCCGCCCTaGACCTCAGTCTACACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FQELTLFSCYLPAGCCWVHGSPP*TSVYTP Trigger: AGGGGTGTAGACTGAGGTGCAGGGCGGACTCCCATG...AACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTGGGAGTGGTTCCATGTGGTaGGCACAGGGTCCCAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QELTLFSCYLPAGCCWVGSGSMW*AQGPKE Trigger: TTCTTTGGGACCCTGTGCCCACCACATGGAACCACT...CCCAACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTGTGGTGTCTTCCAAGTaGAGGCACAGCACAAGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: FQELTLFSCYLPAGCCWVVVSSK*RHSTSR Trigger: GCGGCTTGTGCTGTGCCTCCACTTGGAAGACACCAC...AACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTATAAATATTTCTGTAACTCCCACATCCCACGGAGAGGGGAAGGAAAATAAAGTGGTGTCTTCCAAGTaGAGGCACAGCACAAGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: FINISVTPTSHGEGKENKVVSSK*RHSTSR Trigger: GCGGCTTGTGCTGTGCCTCCACTTGGAAGACACCAC...TTTATTTTCCTTCCCCTCTCCGTGGGATGTGGGAGTTACAGAAATATTTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCATATATAAAGAGGGATTaGAGTGAGCCACCCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SQRTFQKAGLSGLERSNAYIKRD*SEPPQR Trigger: TCTTTGGGGTGGCTCACTTCAATCCCTCTTTATATA...TGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTGGGAAGAAGTTTGCTGGCTaGCTGGATGCAAAGCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: QELTLFSCYLPAGCCWVGKKFAG*LDAKLL Trigger: CAACAGCTTTGCATCCAGCCAGCCAGCAAACTTCTT...CCCAACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CAA 90 bp | TCAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTaGGGTTGGGCAAGTTCAGGAAACCTAAAGAAGTTTGCTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SRVNFIFLLFACWML*GWASSGNLKKFAGW Trigger: CCAGCCAGCAAACTTCTTTAGGTTTCCTGAACTTGCCCAACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTCATGGCCAATGGCTGTaGTGTAAGAATGTCCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FQELTLFSCYLPAGCCWVHGQWL*CKNVPE Trigger: CTCAGGGACATTCTTACAGCACAGCCATTGGCCATG...AACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | CAGGGAAACGGGCCAGGACCAGGTCGGAGGACCGGGTaGGGCTGGGACATCAATGGGAGGCCGCCTTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QGNGPGPGRRTG*GWDINGRPPCL Trigger: CAGGCAAGGCGGCCTCCCATTGATGTCCCAGCCCCACCCGGTCCTCCGACCTGGTCCTGGCCCGTTTCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | AACGGGCCAGGACCAGGTCGGAGGACCGGGTGGGGCTaGGACATCAATGGGAGGCCGCCTTGCCTGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: NGPGPGRRTGWG*DINGRPPCLET Trigger: AGTTTCCAGGCAAGGCGGCCTCCCATTGATGTCCCAGCCCCACCCGGTCCTCCGACCTGGTCCTGGCCCGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR TCA 72 bp | GCGGGTGCCCATAGGCCGGTGTACCACCTTCGTGGCTaGCAGGTAGCGGGTCTTGAGGTCAGCAGCCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: AGAHRPVYHLRG*QVAGLEVSSHV Trigger: GACGTGGCTGCTGACCTCAAGACCCGCTACCTGTCAGCCACGAAGGTGGTACACCGGCCTATGGGCACCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR GCA 72 bp | GGGAGGCCGCCTTGCCTGGAAACTGAAGAGTCCTCCTaGCAGCCCAGGATCTGCTGGGGTCACTTGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRPPCLETEESS*QPRICWGHLRR Trigger: CCTCCTCAAGTGACCCCAGCAGATCCTGGGCTGGCAGGAGGACTCTTCAGTTTCCAGGCAAGGCGGCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR GCA 72 bp | CGGGTCTTGAGGTCAGCAGCCACGTCCTGGAGCTCTTaGAGCCCCTTCCAACAGGTGCGGATGGAGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVLRSAATSWSS*SPFQQVRMEQE Trigger: CTCCTGCTCCATCCGCACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGTGGCTGCTGACCTCAAGACCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR CCA 72 bp | CCAAGTGGAGGCACAGCACAAGCCGCCTCCCACGCCTaGCATCTGGCATCTGCAGGGAAGTCCACCAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSGGTAQAASHA*HLASAGKSTKV Trigger: GACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCCTCCACTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGGTCTCACTTGCAGACGTAGCGCTCCACCGTGCGCTCACACCTGCGGCAGGCCCTGCCCTGACTTCTaGGAGCAGCCTGGAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: YGLTCRRSAPPCAHTCGRPCPDF*EQPGRQ Trigger: TTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGG...CCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACGTCTGCAAGTGAGACCATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR TCA 72 bp | GGTGTACCACCTTCGTGGCTGACAGGTAGCGGGTCTTaGGGTCAGCAGCCACGTCCTGGAGCTCTTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GVPPSWLTGSGS*GQQPRPGALAA Trigger: GGCTGCAAGAGCTCCAGGACGTGGCTGCTGACCTCAAGACCCGCTACCTGTCAGCCACGAAGGTGGTACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR CCA 72 bp | GGTGGGGCTGGGACATCAATGGGAGGCCGCCTTGCCTaGAAACTGAAGAGTCCTCCTGCCAGCCCAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: GGAGTSMGGRLA*KLKSPPASPGS Trigger: AGATCCTGGGCTGGCAGGAGGACTCTTCAGTTTCCAGGCAAGGCGGCCTCCCATTGATGTCCCAGCCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | TCTCCAGGTCAAGCAGGTAGTTGGGGGCGAGCTCGATaGAGGAGCAGTTCCAGCGCATGTCAGCGAAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPGQAGSWGRAR*RSSSSACQRRP Trigger: GGGCCTTCGCTGACATGCGCTGGAACTGCTCCTCCATCGAGCTCGCCCCCAACTACCTGCTTGACCTGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| 3UTR TCA 72 bp | CATCTGCAGGGAAGTCCACCAAGGTCTCTAGGCCCTTaGGTGGGTCCTCAGAGGAGCAGCACCCCTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLQGSPPRSLGP*VGPQRSSTPPQ Trigger: CTGAGGAGGGGTGCTGCTCCTCTGAGGACCCACTCAAGGGCCTAGAGACCTTGGTGGACTTCCCTGCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| 3UTR TCA 72 bp | CTTAGCACATCAGTAGCCACAAGCCCTGTTCGGGCATaGGCTGTGAGCCTGGGCCTTCCCCAACGTCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSTSVATSPVRA*AVSLGLPQRPG Trigger: GCCTGGACGTTGGGGAAGGCCCAGGCTCACAGCTCATGCCCGAACAGGGCTTGTGGCTACTGATGTGCTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | ACTCCCGTGTACCTCTCTCCAGGTCAAGCAGGTAGTTaGGGGCGAGCTCGATGGAGGAGCAGTTCCAGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: TPVYLSPGQAGS*GRARWRSSSSA Trigger: TGCGCTGGAACTGCTCCTCCATCGAGCTCGCCCCCAACTACCTGCTTGACCTGGAGAGAGGTACACGGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| 3UTR TCA 72 bp | ACTGATGGTGGCGGCCGACAGGGCATACACGAAGGCTaGCTCCCGTGTACCTCTCTCCAGGTCAAGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TDGGGRQGIHEG*LPCTSLQVKQV Trigger: TACCTGCTTGACCTGGAGAGAGGTACACGGGAGTCAGCCTTCGTGTATGCCCTGTCGGCCGCCACCATCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| 3UTR GCA 72 bp | CTGGAAACTGAAGAGTCCTCCTGCCAGCCCAGGATCTaGTGGGGTCACTTGAGGAGGGCAGAGATTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LETEESSCQPRI*WGHLRRAEIWG Trigger: CCCCCAAATCTCTGCCCTCCTCAAGTGACCCCAGCAGATCCTGGGCTGGCAGGAGGACTCTTCAGTTTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | GAAACTGAAGAGTCCTCCTGCCAGCCCAGGATCTGCTaGGGTCACTTGAGGAGGGCAGAGATTTGGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ETEESSCQPRIC*GHLRRAEIWGQ Trigger: CTGCCCCCAAATCTCTGCCCTCCTCAAGTGACCCCAGCAGATCCTGGGCTGGCAGGAGGACTCTTCAGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR GCA 72 bp | GAGCCTGGGCCTTCCCCAACGTCCAGGCTTAGACAGTaGAAGCCCAGCCTCATAGACAGGGCAATAGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: EPGPSPTSRLRQ*KPSLIDRAIVW Trigger: CCATACTATTGCCCTGTCTATGAGGCTGGGCTTGCACTGTCTAAGCCTGGACGTTGGGGAAGGCCCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGTCAGGGGAGCTCTGTAGATACACAAGTTCTGAGTCCTTCACAGGCCGGCACGTCCTGGAGCTCTaGCAGCCCCTTCCAACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QKSGELCRYTSSESFTGRHVLEL*QPLPTG Trigger: ACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGTG...CCGGCCTGTGAAGGACTCAGAACTTGTGTATCTACAGAGCTCCCCTGACTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR CCA 72 bp | GCCCTGACTTCTTGGAGCAGCCTGGAAGGCAACATGTaGGCACTCAGGCCCCAGGCTGCCAGGTTATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALTSWSSLEGNM*ALRPQAARLFL Trigger: TAAAAATAACCTGGCAGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| 3UTR CCA 72 bp | CAGTGCAAGCCCAGCCTCATAGACAGGGCAATAGTATaGGCCAGGCCCACCATTCAGGGTCCCACCAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QCKPSLIDRAIV*ARPTIQGPTKN Trigger: GTTTTTGGTGGGACCCTGAATGGTGGGCCTGGCCCATACTATTGCCCTGTCTATGAGGCTGGGCTTGCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | AAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTaGAGCAGCCTGGAAGGCAACATGTGGGCACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KCTVLPIPALTS*SSLEGNMWALR Trigger: CCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR TCA 72 bp | GAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTaGCTTCTTGGAGCAGCCTGGAAGGCAACATGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ERSNAQSYPSLP*LLGAAWKATCG Trigger: CCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR GCA 72 bp | CCTACCAGGGCGGCCTCCCTAAGGTCTCAGCTTTCTTaGAGCAAGCTTAATGGGTCTGAAACCATGGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PTRAASLRSQLS*SKLNGSETMAN Trigger: ATTGGCCATGGTTTCAGACCCATTAAGCTTGCTGCAAGAAAGCTGAGACCTTAGGGAGGCCGCCCTGGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | TGTCCCTCTGTCCTTTACTTTCGGCCTCCAGCCTATTaGCAGACATCACAAACAGGCCAGGTCCTTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CPSVLYFRPPAY*QTSQTGQVLLA Trigger: AGCCAGAAGGACCTGGCCTGTTTGTGATGTCTGCCAATAGGCTGGAGGCCGAAAGTAAAGGACAGAGGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGTGGAATTGAAGATCTGCCTAAGACACGAAAGAACAAGTGGTTCCCCGAGCGAGTCCCCCAGCTCTaGCCTTCTCCTGGGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSGIEDLPKTRKNKWFPERVPQL*PSPGLS Trigger: GGACAGCCCAGGAGAAGGCAAGAGCTGGGGGACTCG...CTCGGGGAACCACTTGTTCTTTCGTGTCTTAGGCAGATCTTCAATTCCACTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAGAAGTCAGGGGAGCTCTGTAGATACACAAGTTCTGAGTCCTTCACAGGCCGGATATCCAGGTCCTaGGGCACCAAGTGTTTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: MQKSGELCRYTSSESFTGRISRS*GTKCLR Trigger: CCGCAAACACTTGGTGCCCAAGGACCTGGATATCCG...GCCTGTGAAGGACTCAGAACTTGTGTATCTACAGAGCTCCCCTGACTTCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR GCA 72 bp | GCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTaGCCTGACTTCTTGGAGCAGCCTGGAAGGCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: ALKGQMHSLTHP*PDFLEQPGRQH Trigger: ATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR CCA 72 bp | CCTATTGGCAGACATCACAAACAGGCCAGGTCCTTCTaGCTTGACAAAGGTGACTCTGCAGCCTGGCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: PIGRHHKQARSF*LDKGDSAAWLT Trigger: AGTAAGCCAGGCTGCAGAGTCACCTTTGTCAAGCCAGAAGGACCTGGCCTGTTTGTGATGTCTGCCAATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCGGTCTTTCTGGCCTaGAAAGGTCAAATGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: KPVFLALKGQMHSLTHPCPVFLA*KGQMHS Trigger: ACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGG...GCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR TCA 72 bp | CCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTaGAAGGTCAAATGCACAGTCTTACCCATCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PKNIPESRSFWP*KVKCTVLPIPA Trigger: GGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR TCA 72 bp | ACTAGGGTTATGTTTCAAGACGTCTGTCCTCACCCTTaGCCAACAGATCACATACAGGGAAACGGGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TRVMFQDVCPHP*PTDHIQGNGPG Trigger: TCCTGGCCCGTTTCCCTGTATGTGATCTGTTGGTCAAGGGTGAGGACAGACGTCTTGAAACATAACCCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR GCA 72 bp | CTTGGGTCCCATGGGATCCCACCTTCTCATTCTTCATaGAGAAGTCAGGGGAGCTCTGTAGATACACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGSHGIPPSHSS*RSQGSSVDTQV Trigger: AACTTGTGTATCTACAGAGCTCCCCTGACTTCTGCATGAAGAATGAGAAGGTGGGATCCCATGGGACCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| 3UTR GCA 72 bp | GTTGGGTTGGGCAAGTTCAGGAAACCTAAAGAAGTTTaGTGGCTGGCTGGATGCAAAGCTGTTGTCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VGLGKFRKPKEV*WLAGCKAVVMK Trigger: CTTCATGACAACAGCTTTGCATCCAGCCAGCCAGCAAACTTCTTTAGGTTTCCTGAACTTGCCCAACCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTATAAATATTTCTGTAACTCCCACATCCCACGGAGAGGGGAAGGAAAATAAACCCTGCCCTGACTTCTaGGAGCAGCCTGGAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FINISVTPTSHGEGKENKPCPDF*EQPGRQ Trigger: TTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGG...TTTATTTTCCTTCCCCTCTCCGTGGGATGTGGGAGTTACAGAAATATTTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| 3UTR CCA 72 bp | ATTTTCCTGCTATTTGCCTGCTGGATGTTGTTGGGTTaGGCAAGTTCAGGAAACCTAAAGAAGTTTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IFLLFACWMLLG*ASSGNLKKFAG Trigger: GCCAGCAAACTTCTTTAGGTTTCCTGAACTTGCCCAACCCAACAACATCCAGCAGGCAAATAGCAGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CCA 72 bp | TCAAGAGTTAACTTTATTTTCCTGCTATTTGCCTGCTaGATGTTGTTGGGTTGGGCAAGTTCAGGAAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRVNFIFLLFAC*MLLGWASSGNL Trigger: TAGGTTTCCTGAACTTGCCCAACCCAACAACATCCAGCAGGCAAATAGCAGGAAAATAAAGTTAACTCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR TCA 90 bp | ACGGGCCAGGACCAGGTCGGAGGACCGGGTGGGGCTGGGACATCAATGGGAGGCGCCCGGGCGATGGTGTaGCTGATGGTGGCGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGQDQVGGPGGAGTSMGGARAMV*LMVAAD Trigger: GTCGGCCGCCACCATCAGTCACACCATCGCCCGGGC...GCCTCCCATTGATGTCCCAGCCCCACCCGGTCCTCCGACCTGGTCCTGGCCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR TCA 90 bp | CCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGGGGCGATGGTGTGACTaGTGGTGGCGGCCGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSPRATRPPGVVSSKWRGRWCD*WWRPTG Trigger: CCCTGTCGGCCGCCACCATCAGTCACACCATCGCCC...CCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | CCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCGCGCCCACAGCACATaGGGTCGCAGCTGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSPRATRPPGVVSSKWRRAHST*GRSCHC Trigger: GCAGTGACAGCTGCGACCTCATGTGCTGTGGGCGCG...CCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGCGGCAGAGCTGCACCTaGGCAGACACCAGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPRLSQGDQASWCGVFQVRQSCT*ADTRPS Trigger: GGAGGGCCTGGTGTCTGCGCAGGTGCAGCTCTGCCG...CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTGAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCGCAGGTCGCCAGAGGTaGAGGCCCGGGCGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKPRLSQGDQASWCGVFAGRQR*RPGRWC Trigger: ACACCATCGCCCGGGCCTGCACCTCTGGCGACCTGC...GAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTCAAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | GGGCATATGGTCTCACTTGCAGACGTAGCGCTCCACCGTGCGCTCACACCTGCGGCCCGGGCGATGGTGTaGCTGATGGTGGCGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHMVSLADVALHRALTPAARAMV*LMVAAD Trigger: GTCGGCCGCCACCATCAGTCACACCATCGCCCGGGC...CGCAGGTGTGAGCGCACGGTGGAGCGCTACGTCTGCAAGTGAGACCATATGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165240.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGCCCCTTCCAACAGGTaGGGATGGAGCAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APALPGRPGLLVWCLPSGAPSNR*GWSRSQ Trigger: CTGGCTCCTGCTCCATCCGCACCTGTTGGAAGGGGC...TCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGAGGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGCGTAGCGCTCCACCGTaGGCTCACACCTGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVEAQHKPPPTPGIWHLQRSAPP*AHTCGR Trigger: CCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACG...CTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCCTCCACTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACCACGTAGCGCTCCACCGTaGGCTCACACCTGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHKPPPTPGIWHLQGSPPRSAPP*AHTCGR Trigger: CCTGCCGCAGGTGTGAGCGCACGGTGGAGCGCTACG...TGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCACGTCCTGGAGCTCTTGCAGCCCCTTCCAACAGGTGCGGATGGAGCAGGAGGCACGTAGAGCCTaGGACGGGGCCGCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AATSWSSCSPFQQVRMEQEARRA*DGAAGA Trigger: TGCTCCTGCGGCCCCGTCCCAGGCTCTACGTGCCTC...CTGCTCCATCCGCACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGTGGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCACGTCCTGGAGCTCTTGCAGCCCCTTCCAACAGGTGCGGATGGAGCAGGGCACGATGGTGCGCATaGGCTCCAGGTTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPRPGALAAPSNRCGWSRARWCA*APGCCG Trigger: GCCGCAGCAACCTGGAGCTCATGCGCACCATCGTGC...CCTGCTCCATCCGCACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGTGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTGCACGATGGTGCGCATaGGCTCCAGGTTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAQHKPPPTPGIWHLQGSARWCA*APGCCG Trigger: GCCGCAGCAACCTGGAGCTCATGCGCACCATCGTGC...ACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGTTGCTGCGGCAGAGCTaGACCTGCGCAGACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRLSQGDQASWCGVFQVLLRQS*TCADTR Trigger: CCTGGTGTCTGCGCAGGTGCAGCTCTGCCGCAGCAA...CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | ACGGGCCAGGACCAGGTCGGAGGACCGGGTGGGGCTGGGACATCAATGGGAGGCACGTCCTGGAGCTCTTaGAGCCCCTTCCAACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGQDQVGGPGGAGTSMGGTSWSS*SPFQQV Trigger: CACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGT...GCCTCCCATTGATGTCCCAGCCCCACCCGGTCCTCCGACCTGGTCCTGGCCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTGAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCTGGGGGCGAGCTCGATaGAGGAGCAGTTCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKPRLSQGDQASWCGVFWGRAR*RSSSSA Trigger: TGCGCTGGAACTGCTCCTCCATCGAGCTCGCCCCCA...GAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTCAAAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGACAGTGCCAGCCACTTaGTGCCATAGCACACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRLSQGDQASWCGVFQVTVPAT*CHSTRR Trigger: CCGGCGTGTGCTATGGCATCAAGTGGCTGGCACTGT...CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTGGAGCTCTTGCAGCCCCTTCCAACAGGTGCGGATGGAGCAGGAGCCAGAGCACGATGGTGCGCATaGGCTCCAGGTTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLELLQPLPTGADGAGARARWCA*APGCCG Trigger: GCCGCAGCAACCTGGAGCTCATGCGCACCATCGTGC...TCTGGCTCCTGCTCCATCCGCACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTACAGGTAGCGGGTCTTaGGGTCAGCAGCCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EAPALPGRPGLLVWCLPSTGSGS*GQQPRP Trigger: AGGACGTGGCTGCTGACCTCAAGACCCGCTACCTGT...ACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGTCAAGCAGGTAGTTaGGGGCGAGCTCGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAPALPGRPGLLVWCLPSGQAGS*GRARWR Trigger: CCTCCATCGAGCTCGCCCCCAACTACCTGCTTGACC...ACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | TTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCAGCCCGGGCGATGGTGTaGCTGATGGTGGCGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPIPALTSWSSLEGNMWAARAMV*LMVAAD Trigger: GTCGGCCGCCACCATCAGTCACACCATCGCCCGGGC...TGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACTTGCACTGCCTGTCTTaGGTCCCATGGGATCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRATRPPGVVSSKWRHLHCLS*VPWDPT Trigger: GGTGGGATCCCATGGGACCCAAGACAGGCAGTGCAA...GTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACAGTACCACCTTCGTGGCTaGCAGGTAGCGGGTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQGDQASWCGVFQVEAQYHLRG*QVAGLE Trigger: CTCAAGACCCGCTACCTGTCAGCCACGAAGGTGGTA...CTGTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | TTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCAGCAGGTCGCCAGAGGTaGAGGCCCGGGCGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPIPALTSWSSLEGNMWAAGRQR*RPGRWC Trigger: ACACCATCGCCCGGGCCTGCACCTCTGGCGACCTGC...TGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | GTATGGGCCAGGCCCACCATTCAGGGTCCCACCAAAAACCTACCAGGGCGGCCTGGTCAAGCAGGTAGTTaGGGGCGAGCTCGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWARPTIQGPTKNLPGRPGQAGS*GRARWR Trigger: CCTCCATCGAGCTCGCCCCCAACTACCTGCTTGACC...AGGCCGCCCTGGTAGGTTTTTGGTGGGACCCTGAATGGTGGGCCTGGCCCATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCACTCAGGCCCCAGGCTGCCAGTCCAACAGGTGCGGATaGAGCAGGAGCCAGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: FLEQPGRQHVGTQAPGCQSNRCG*SRSQTP Trigger: GGGTGTCTGGCTCCTGCTCCATCCGCACCTGTTGGA...CTGGCAGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCCGGCAGAGCTGCACCTaGGCAGACACCAGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCTVLPIPALTSWSSLEGRQSCT*ADTRPS Trigger: GGAGGGCCTGGTGTCTGCGCAGGTGCAGCTCTGCCG...GCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCGCAGGTCGCCAGAGGTaGAGGCCCGGGCGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCTVLPIPALTSWSSLEGAGRQR*RPGRWC Trigger: ACACCATCGCCCGGGCCTGCACCTCTGGCGACCTGC...GCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCACTCAGGCCCCAGGCTGCCAGACGTCCTGGAGCTCTTaGAGCCCCTTCCAACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLEQPGRQHVGTQAPGCQTSWSS*SPFQQV Trigger: CACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGT...CTGGCAGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCCGGGTGGCTCACCTaGGACGGGGCCGCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVFLALKGQMHSLTHPCPGWLT*DGAAGA Trigger: TGCTCCTGCGGCCCCGTCCCAGGTGAGCCACCCGGG...GCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCTGTCTTGGGTCCCATaGGATCCCACCTTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLKPRLSQGDQASWCGVFLSWVP*DPTFSF Trigger: GAATGAGAAGGTGGGATCCCATGGGACCCAAGACAG...GAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTCAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| 3UTR CAA 72 bp | ACAGGCCGGATATCCAGGTCCTTGGGCACCAAGTGTTaGCGGGTGCCCATAGGCCGGTGTACCACCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGRISRSLGTKC*RVPIGRCTTFV Trigger: CACGAAGGTGGTACACCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAAGGACCTGGATATCCGGCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | GCACTGCCTGTCTTGGGTCCCATGGGATCCCACCTTCTCATTCTTCATGCAGAAGGGCGATGGTGTGACTaGTGGTGGCGGCCGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPVLGPMGSHLLILHAEGRWCD*WWRPTG Trigger: CCCTGTCGGCCGCCACCATCAGTCACACCATCGCCC...TTCTGCATGAAGAATGAGAAGGTGGGATCCCATGGGACCCAAGACAGGCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCACTCAGGCCCCAGGCTGCCAGCAGTGGTACTTGCAGTaGCATCGCTCCACCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLEQPGRQHVGTQAPGCQQWYLQ*HRSTTL Trigger: CAGAGTGGTGGAGCGATGTCACTGCAAGTACCACTG...CTGGCAGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCGAGCCAGACACCCCATaGCATTTACACTTCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTAQAASHAWHLASAGKSEPDTP*HLHFVS Trigger: GGAAACGAAGTGTAAATGCCATGGGGTGTCTGGCTC...GGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGAGGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGAGCTGTCACTGCCGTTaGAAGTCTTGTTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVEAQHKPPPTPGIWHLQSCHCR*KSCCTA Trigger: GGCAGTGCAACAAGACTTCCAACGGCAGTGACAGCT...CTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCCTCCACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| 3UTR CAA 72 bp | AGTTCTGAGTCCTTCACAGGCCGGATATCCAGGTCCTaGGGCACCAAGTGTTTGCGGGTGCCCATAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSESFTGRISRS*GTKCLRVPIGR Trigger: CCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAAGGACCTGGATATCCGGCCTGTGAAGGACTCAGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGGGCGATGGTGTGACTaGTGGTGGCGGCCGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LALKGQMHSLTHPCPDFLGRWCD*WWRPTG Trigger: CCCTGTCGGCCGCCACCATCAGTCACACCATCGCCC...CAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | GGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCCCTTCTCATTCTTCATaGAGAAGTCAGGGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTAQAASHAWHLASAGKSPSHSS*RSQGSS Trigger: AGAGCTCCCCTGACTTCTGCATGAAGAATGAGAAGG...GGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCAACATGTGTGGGGGCGAGCTCGATaGAGGAGCAGTTCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTHPCPDFLEQPGRQHVWGRAR*RSSSSA Trigger: TGCGCTGGAACTGCTCCTCCATCGAGCTCGCCCCCA...CACATGTTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCACAGTGCCAGCCACTTaGTGCCATAGCACACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KCTVLPIPALTSWSSLEGTVPAT*CHSTRR Trigger: CCGGCGTGTGCTATGGCATCAAGTGGCTGGCACTGT...GCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGTGGGCACAGGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTACAGTGCCAGCCACTTaGTGCCATAGCACACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CGGHRVPKNIPESRSFWPTVPAT*CHSTRR Trigger: CCGGCGTGTGCTATGGCATCAAGTGGCTGGCACTGT...AGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCCTGTGCCCACCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | AGTCAGGGGAGCTCTGTAGATACACAAGTTCTGAGTCCTTCACAGGCCGGATATCGGCAGAGCTGCACCTaGGCAGACACCAGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGSSVDTQVLSPSQAGYRQSCT*ADTRPS Trigger: GGAGGGCCTGGTGTCTGCGCAGGTGCAGCTCTGCCG...ATATCCGGCCTGTGAAGGACTCAGAACTTGTGTATCTACAGAGCTCCCCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165240.2 |
||
| CDS-3UTR GCA 90 bp | GAGGATGCCTTTGGAGACCCAGCTCTGAAACTGCAAGGCCAGGCTGGAGGCCAAGGTCGCAGCTGTCACTaGCGTTGGAAGTCTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDAFGDPALKLQGQAGGQGRSCH*RWKSCC Trigger: GCAACAAGACTTCCAACGGCAGTGACAGCTGCGACC...TTGGCCTCCAGCCTGGCCTTGCAGTTTCAGAGCTGGGTCTCCAAAGGCATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTCAGGGGAGCTCTGTAGATACACAAGTTCTGAGTCCTTCACAGGCCGGTGGGGGCGAGCTCGATaGAGGAGCAGTTCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKSGELCRYTSSESFTGRWGRAR*RSSSSA Trigger: TGCGCTGGAACTGCTCCTCCATCGAGCTCGCCCCCA...CCGGCCTGTGAAGGACTCAGAACTTGTGTATCTACAGAGCTCCCCTGACTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165240.2 |
||
| 3UTR CAA 72 bp | ATGAGGTCGCAGCTGTCACTGCCGTTGGAAGTCTTGTaGCACTGCCTGTCTTGGGTCCCATGGGATCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: MRSQLSLPLEVL*HCLSWVPWDPT Trigger: GGTGGGATCCCATGGGACCCAAGACAGGCAGTGCAACAAGACTTCCAACGGCAGTGACAGCTGCGACCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163913.8 ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | GAGGATGCCTTTGGAGACCCAGCTCTGAAACTGCAAGGCCAGGCTGGAGGCCAATTACAGTGTTGCGTCTaGTTCAGTGCCAAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EDAFGDPALKLQGQAGGQLQCCV*FSAKAA Trigger: GGCAGCCTTGGCACTGAATCAGACGCAACACTGTAA...TTGGCCTCCAGCCTGGCCTTGCAGTTTCAGAGCTGGGTCTCCAAAGGCATCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGCCCCTTCCAACAGGTaGGGATGGAGCAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LALKGQMHSLTHPCPDFLAPSNR*GWSRSQ Trigger: CTGGCTCCTGCTCCATCCGCACCTGTTGGAAGGGGC...CAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTGGAATTGAAGATCTGCCTAAGACACGAAAGAACAAGTGGTTCCCCGAGCCCGGGTGGCTCACCTaGGACGGGGCCGCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGIEDLPKTRKNKWFPEPGWLT*DGAAGA Trigger: TGCTCCTGCGGCCCCGTCCCAGGTGAGCCACCCGGG...CTCGGGGAACCACTTGTTCTTTCGTGTCTTAGGCAGATCTTCAATTCCACTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTCACTGCCGTTGGAAGTCTTGTTGCACTGCCTGTCTTGGGTCCCATGGGATTACAGTGTTGCGTCTaGTTCAGTGCCAAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVTAVGSLVALPVLGPMGLQCCV*FSAKAA Trigger: GGCAGCCTTGGCACTGAATCAGACGCAACACTGTAA...TCCCATGGGACCCAAGACAGGCAGTGCAACAAGACTTCCAACGGCAGTGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165240.2 |
||
| CDS-3UTR TCA 90 bp | GGTTATGTTTCAAGACGTCTGTCCTCACCCTTGACCAACAGATCACATACAGGGGCACGATGGTGCGCATaGGCTCCAGGTTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYVSRRLSSPLTNRSHTGARWCA*APGCCG Trigger: GCCGCAGCAACCTGGAGCTCATGCGCACCATCGTGC...CCCTGTATGTGATCTGTTGGTCAAGGGTGAGGACAGACGTCTTGAAACATAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATCGCGCCCACAGCACATaGGGTCGCAGCTGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQRTFQKAGLSGLERSNRAHST*GRSCHC Trigger: GCAGTGACAGCTGCGACCTCATGTGCTGTGGGCGCG...ATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCAGCTGCACAGCCACTTaGTGCCATAGCACACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVFLALKGQMHSLTHPCSCTAT*CHSTRR Trigger: CCGGCGTGTGCTATGGCATCAAGTGGCTGTGCAGCT...GCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGTTGCTGCGGCAGAGCTaGACCTGCGCAGACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGQMHSLTHPCPDFLEQLLRQS*TCADTR Trigger: CCTGGTGTCTGCGCAGGTGCAGCTCTGCCGCAGCAA...CTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCTCCAACAGGTGCGGATaGAGCAGGAGCCAGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: KPVFLALKGQMHSLTHPCSNRCG*SRSQTP Trigger: GGGTGTCTGGCTCCTGCTCCATCCGCACCTGTTGGA...GCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGGGCACAGGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTGGATATCCAGGTCCTTaGGCACCAAGTGTTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CGGHRVPKNIPESRSFWPGYPGP*APSVCG Trigger: CCCGCAAACACTTGGTGCCCAAGGACCTGGATATCC...AGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCCTGTGCCCACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| 3UTR CAA 72 bp | CTGTCCCTCTGTCCTTTACTTTCGGCCTCCAGCCTATaGGCAGACATCACAAACAGGCCAGGTCCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLCPLLSASSL*ADITNRPGPSG Trigger: GCCAGAAGGACCTGGCCTGTTTGTGATGTCTGCCAATAGGCTGGAGGCCGAAAGTAAAGGACAGAGGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAACAGGTAGCGGGTCTTaGGGTCAGCAGCCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGSQRTFQKAGLSGLERSTGSGS*GQQPRP Trigger: AGGACGTGGCTGCTGACCTCAAGACCCGCTACCTGT...TGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGGGCACAGGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTAGCTGTCACTGCCGTTaGAAGTCTTGTTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGGHRVPKNIPESRSFWPSCHCR*KSCCTA Trigger: GGCAGTGCAACAAGACTTCCAACGGCAGTGACAGCT...AGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCCTGTGCCCACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| 3UTR CAA 72 bp | CCCAAACAGTTTTTCCTGGCCCACCTGGTTCCACACTaGAAAGAGGGAATCGGTCCTGCTGGTCCCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PKQFFLAHLVPH*KEGIGPAGPCI Trigger: GATACAGGGACCAGCAGGACCGATTCCCTCTTTCAAGTGTGGAACCAGGTGGGCCAGGAAAAACTGTTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGCAAGTTCAGGAAACCTAAAGAAGTTTGCTGGCTGGCTGGATGCAAAGTTGCACTGCCTGTCTTaGGTCCCATGGGATCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GWASSGNLKKFAGWLDAKLHCLS*VPWDPT Trigger: GGTGGGATCCCATGGGACCCAAGACAGGCAGTGCAA...CTTTGCATCCAGCCAGCCAGCAAACTTCTTTAGGTTTCCTGAACTTGCCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| 3UTR CAA 72 bp | AGGGAGGCACGTAGAGCCTGTCTCCCCACTTCACTGTaGTGTAGACGCATCAGTTTATTGGCTTGGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: REARRACLPTSL*CRRISLLAWDP Trigger: AGGATCCCAAGCCAATAAACTGATGCGTCTACACAACAGTGAAGTGGGGAGACAGGCTCTACGTGCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAACAGTTTTTCCTGGCCCACCTGGTTCCACACTTGAAAGAGGGAATCTACCACCTTCGTGGCTaGCAGGTAGCGGGTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKQFFLAHLVPHLKEGIYHLRG*QVAGLE Trigger: CTCAAGACCCGCTACCTGTCAGCCACGAAGGTGGTA...GATTCCCTCTTTCAAGTGTGGAACCAGGTGGGCCAGGAAAAACTGTTTGGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGCAAGTTCAGGAAACCTAAAGAAGTTTGCTGGCTGGCTGGATGCAAAGCAGTGGTACTTGCAGTaGCATCGCTCCACCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWASSGNLKKFAGWLDAKQWYLQ*HRSTTL Trigger: CAGAGTGGTGGAGCGATGTCACTGCAAGTACCACTG...CTTTGCATCCAGCCAGCCAGCAAACTTCTTTAGGTTTCCTGAACTTGCCCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGGGTCGCAGCTGTCACTaGCGTTGGAAGTCTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGQMHSLTHPCPDFLEQGRSCH*RWKSCC Trigger: GCAACAAGACTTCCAACGGCAGTGACAGCTGCGACC...CTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCGGATATCCAGGTCCTTaGGCACCAAGTGTTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLALKGQMHSLTHPCPDFGYPGP*APSVCG Trigger: CCCGCAAACACTTGGTGCCCAAGGACCTGGATATCC...GAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGCTGTCTTGGGTCCCATaGGATCCCACCTTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LALKGQMHSLTHPCPDFLLSWVP*DPTFSF Trigger: GAATGAGAAGGTGGGATCCCATGGGACCCAAGACAG...CAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
||
| 3UTR CAA 72 bp | CCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTaGAAAGGTCAAATGCACAGTCTTACCCATCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PKEHSRKPVFLA*KGQMHSLTHPC Trigger: GCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000163913.8 ENSMUST00000167303.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCCCTTCTCATTCTTCATaGAGAAGTCAGGGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLALKGQMHSLTHPCPDFPSHSS*RSQGSS Trigger: AGAGCTCCCCTGACTTCTGCATGAAGAATGAGAAGG...GAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CCA 90 bp | TTTATAAATATTTCTGTAACTCCCACATCCCACGGAGAGGGGAAGGAAAATAAAGAGCCAGACACCCCATaGCATTTACACTTCGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FINISVTPTSHGEGKENKEPDTP*HLHFVS Trigger: GGAAACGAAGTGTAAATGCCATGGGGTGTCTGGCTC...TTTATTTTCCTTCCCCTCTCCGTGGGATGTGGGAGTTACAGAAATATTTATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | CCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGCGCATGAGCTCCAGGTaGCTGCGGCAGAGCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: PRLSQGDQASWCGVFQVERMSSR*LRQSCT Trigger: TGTGCAGCTCTGCCGCAGCAACCTGGAGCTCATGCG...CTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163913.8 |
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| CDS-3UTR CAA 90 bp | CCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGAAGGCTGCCGGAGTCTaGGACAGTGCCAGCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: PGSPRATRPPGVVSSKWRKAAGV*DSASHL Trigger: CAAGTGGCTGGCACTGTCCAAGACTCCGGCAGCCTT...CCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACTTGGGCACCAAGTGTTaGCGGGTGCCCATAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GSPRATRPPGVVSSKWRHLGTKC*RVPIGR Trigger: CCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAA...GTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGTTGGGCACCAAGTGTTaGCGGGTGCCCATAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: KPRLSQGDQASWCGVFQVLGTKC*RVPIGR Trigger: CCGGCCTATGGGCACCCGCAAACACTTGGTGCCCAA...CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | TTCTTGGAGCAGCCTGGAAGGCAACATGTGGGCACTCAGGCCCCAGGCTGCCAGCGCATGAGCTCCAGGTaGCTGCGGCAGAGCTGCACC | + |
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Preference number: 5 (lower is better) Translates to: FLEQPGRQHVGTQAPGCQRMSSR*LRQSCT Trigger: GGTGCAGCTCTGCCGCAGCAACCTGGAGCTCATGCG...CTGGCAGCCTGGGGCCTGAGTGCCCACATGTTGCCTTCCAGGCTGCTCCAAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067495.9 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | GAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTCACGTCCTGGAGCTCTaGCAGCCCCTTCCAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: EAPALPGRPGLLVWCLPSHVLEL*QPLPTG Trigger: ACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGTG...ACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGCACGTCCTGGAGCTCTaGCAGCCCCTTCCAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: KPRLSQGDQASWCGVFQVHVLEL*QPLPTG Trigger: ACCTGTTGGAAGGGGCTGCAAGAGCTCCAGGACGTG...CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGTTGCACTGCCTGTCTaGGGTCCCATGGGATCCCAC | + |
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Preference number: 5 (lower is better) Translates to: KPRLSQGDQASWCGVFQVVALPV*GPMGSH Trigger: GTGGGATCCCATGGGACCCAAGACAGGCAGTGCAAC...CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGCGGATATCCAGGTCCTaGGGCACCAAGTGTTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: KPRLSQGDQASWCGVFQVRISRS*GTKCLR Trigger: CCGCAAACACTTGGTGCCCAAGGACCTGGATATCCG...CACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | CCTTTGAAGCCCCGGCTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCGGATATCCAGGTCCTaGGGCACCAAGTGTTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: PLKPRLSQGDQASWCGVFRISRS*GTKCLR Trigger: CCGCAAACACTTGGTGCCCAAGGACCTGGATATCCG...GAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAGCCGGGGCTTCAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | GCTGTCACTGCCGTTGGAAGTCTTGTTGCACTGCCTGTCTTGGGTCCCATGGGACGCATGAGCTCCAGGTaGCTGCGGCAGAGCTGCACC | + |
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Preference number: 5 (lower is better) Translates to: AVTAVGSLVALPVLGPMGRMSSR*LRQSCT Trigger: GGTGCAGCTCTGCCGCAGCAACCTGGAGCTCATGCG...TCCCATGGGACCCAAGACAGGCAGTGCAACAAGACTTCCAACGGCAGTGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165240.2 |
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| CDS-3UTR CAA 90 bp | CTCTCCCAGGGCGACCAGGCCTCCTGGTGTGGTGTCTTCCAAGTGGAGGCACAGCTGCCGTTGGAAGTCTaGTTGCACTGCCTGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LSQGDQASWCGVFQVEAQLPLEV*LHCLSW Trigger: CCAAGACAGGCAGTGCAACAAGACTTCCAACGGCAG...CTGTGCCTCCACTTGGAAGACACCACACCAGGAGGCCTGGTCGCCCTGGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGGAGGCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGCTGCCGTTGGAAGTCTaGTTGCACTGCCTGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QVEAQHKPPPTPGIWHLQLPLEV*LHCLSW Trigger: CCAAGACAGGCAGTGCAACAAGACTTCCAACGGCAG...CTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGCCTCCACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS TCA 90 bp | ACCTGCGCAGACACCAGGCCCTCCAGCTGTTTACAGTGTTGCGTCTaGTTCAGTGCCAAGGCTGCCGGAGTCTTGGACAGTGCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TCADTRPSSCLQCCV*FSAKAAGVLDSASH Trigger: GTGGCTGGCACTGTCCAAGACTCCGGCAGCCTTGGCACTGAATCAGACGCAACACTGTAAACAGCTGGAGGGCCTGGTGTCTGCGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | GAGGATGCCTTTGGAGACCCAGCTCTGAAACTGCAAGGCCAGGCTGGAGGCCAAAAGGCTGCCGGAGTCTaGGACAGTGCCAGCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: EDAFGDPALKLQGQAGGQKAAGV*DSASHL Trigger: CAAGTGGCTGGCACTGTCCAAGACTCCGGCAGCCTT...TTGGCCTCCAGCCTGGCCTTGCAGTTTCAGAGCTGGGTCTCCAAAGGCATCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067495.9 |
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| CDS-3UTR CAA 90 bp | GCCGGTCTTTCTGGCCTTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCGGAGCATCGGAAAACTaGGCCCCCATGAGGAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: AGLSGLERSNAQSYPSLPGASEN*APMRSP Trigger: CGGGCTCCTCATGGGGGCCAAGTTTTCCGATGCTCC...GGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAAGGCCAGAAAGACCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS GCA 90 bp | AGACACCAGGCCCTCCAGCTGTTTACAGTGTTGCGTCTGATTCAGTaGCAAGGCTGCCGGAGTCTTGGACAGTGCCAGCCACTTGATGCC | + |
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Preference number: 5 (lower is better) Translates to: RHQALQLFTVLRLIQ*QGCRSLGQCQPLDA Trigger: GGCATCAAGTGGCTGGCACTGTCCAAGACTCCGGCAGCCTTGGCACTGAATCAGACGCAACACTGTAAACAGCTGGAGGGCCTGGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | GCACAGCACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACTCCCCACTTCACTGTaGTGTAGACGCATCAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: AQHKPPPTPGIWHLQGSPLPTSL*CRRISL Trigger: TAAACTGATGCGTCTACACAACAGTGAAGTGGGGAG...TGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGTGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS GCA 90 bp | GCCCTCCAGCTGTTTACAGTGTTGCGTCTGATTCAGTGCCAAGGCTaGCGGAGTCTTGGACAGTGCCAGCCACTTGATGCCATAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: ALQLFTVLRLIQCQG*RSLGQCQPLDAIAH Trigger: GTGTGCTATGGCATCAAGTGGCTGGCACTGTCCAAGACTCCGGCAGCCTTGGCACTGAATCAGACGCAACACTGTAAACAGCTGGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | ACAAGCCGCCTCCCACGCCTGGCATCTGGCATCTGCAGGGAAGTCCACCAAGGTCTCCCCACTTCACTGTaGTGTAGACGCATCAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: TSRLPRLASGICREVHQGLPTSL*CRRISL Trigger: TAAACTGATGCGTCTACACAACAGTGAAGTGGGGAG...ACCTTGGTGGACTTCCCTGCAGATGCCAGATGCCAGGCGTGGGAGGCGGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGGGAGCATCGGAAAACTaGGCCCCCATGAGGAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: LKGQMHSLTHPCPDFLEQGASEN*APMRSP Trigger: CGGGCTCCTCATGGGGGCCAAGTTTTCCGATGCTCC...CTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | ATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGCCTGGAAGGCAACAGCTGTCACTGCCGTaGGAAGTCTTGTTGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: MHSLTHPCPDFLEQPGRQQLSLP*EVLLHC Trigger: GCAGTGCAACAAGACTTCCAACGGCAGTGACAGCTG...TTGCCTTCCAGGCTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGTCAAATGCACAGTCTTACCCATCCCTGCCCTGACTTCTTGGAGCAGGTTGCACTGCCTGTCTaGGGTCCCATGGGATCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LKGQMHSLTHPCPDFLEQVALPV*GPMGSH Trigger: GTGGGATCCCATGGGACCCAAGACAGGCAGTGCAAC...CTGCTCCAAGAAGTCAGGGCAGGGATGGGTAAGACTGTGCATTTGACCTTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAAAGAACATTCCAGAAAGCCGGTCTTTCTGGCCTTGAAAGGTCAAATAAGGCTGCCGGAGTCTaGGACAGTGCCAGCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: GSQRTFQKAGLSGLERSNKAAGV*DSASHL Trigger: CAAGTGGCTGGCACTGTCCAAGACTCCGGCAGCCTT...ATTTGACCTTTCAAGGCCAGAAAGACCGGCTTTCTGGAATGTTCTTTGGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS-3UTR CAA 90 bp | TTTATAAATATTTCTGTAACTCCCACATCCCACGGAGAGGGGAAGGAAAATAAACAGCTGTCACTGCCGTaGGAAGTCTTGTTGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: FINISVTPTSHGEGKENKQLSLP*EVLLHC Trigger: GCAGTGCAACAAGACTTCCAACGGCAGTGACAGCTG...TTTATTTTCCTTCCCCTCTCCGTGGGATGTGGGAGTTACAGAAATATTTATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067495.9 ENSMUST00000167303.8 |
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| CDS TCA 72 bp | CCAAGGCTGCCGGAGTCTTGGACAGTGCCAGCCACTTaGTGCCATAGCACACGCCGGTGTGGAGCGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PRLPESWTVPAT*CHSTRRCGAPR Trigger: CCTTGGCGCTCCACACCGGCGTGTGCTATGGCATCAAGTGGCTGGCACTGTCCAAGACTCCGGCAGCCTTGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS GCA 72 bp | CGCATGAGCTCCAGGTTGCTGCGGCAGAGCTGCACCTaGGCAGACACCAGGCCCTCCAGCTGTTTACAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RMSSRLLRQSCT*ADTRPSSCLQC Trigger: ACACTGTAAACAGCTGGAGGGCCTGGTGTCTGCGCAGGTGCAGCTCTGCCGCAGCAACCTGGAGCTCATGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS GCA 72 bp | GCCCTCCAGCTGTTTACAGTGTTGCGTCTGATTCAGTaGCAAGGCTGCCGGAGTCTTGGACAGTGCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ALQLFTVLRLIQ*QGCRSLGQCQP Trigger: TGGCTGGCACTGTCCAAGACTCCGGCAGCCTTGGCACTGAATCAGACGCAACACTGTAAACAGCTGGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS TCA 72 bp | GACACCAGGCCCTCCAGCTGTTTACAGTGTTGCGTCTaGTTCAGTGCCAAGGCTGCCGGAGTCTTGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: DTRPSSCLQCCV*FSAKAAGVLDS Trigger: ACTGTCCAAGACTCCGGCAGCCTTGGCACTGAATCAGACGCAACACTGTAAACAGCTGGAGGGCCTGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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| CDS GCA 72 bp | CTGTTTACAGTGTTGCGTCTGATTCAGTGCCAAGGCTaGCGGAGTCTTGGACAGTGCCAGCCACTTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: LFTVLRLIQCQG*RSLGQCQPLDA Trigger: GGCATCAAGTGGCTGGCACTGTCCAAGACTCCGGCAGCCTTGGCACTGAATCAGACGCAACACTGTAAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067495.9 ENSMUST00000165122.8 ENSMUST00000165240.2 ENSMUST00000167303.8 |
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