Pregenerated sensors for WNT10A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026167Ensembl transcript IDs: ENSMUST00000006718.15, ENSMUST00000187238.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGTCGGAGTGGCTGGCCCTGCGGCGCAGCCCTGGAGTGCCCGGTaGTGGCGAGGGTGCTCCCGCGGGGCCGGGCTCCAGCTGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: QVGVAGPAAQPWSAR*WRGCSRGAGLQLAT Trigger: GGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTCGCCAGCACCGGGCACTCCAGGGCTGCGCCGCAGGGCCAGCCACTCCGACCTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR GCA 90 bp | GCTGGCCCTGCGGCGCAGCCCTGGAGTGCCCGGTGCTGGCGAGGGTaGTCCCGCGGGGCCGGGCTCCAGCTGGCCACCGTTGCGGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: AGPAAQPWSARCWRG*SRGAGLQLATVAVV Trigger: CACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTCGCCAGCACCGGGCACTCCAGGGCTGCGCCGCAGGGCCAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CCA 90 bp | GTGCCCGGTGCTGGCGAGGGTGCTCCCGCGGGGCCGGGCTCCAGCTaGCCACCGTTGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTGG | + |
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Preference number: 1 (lower is better) Translates to: VPGAGEGAPAGPGSS*PPLRLCGRMSVARW Trigger: CCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTCGCCAGCACCGGGCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CCA 90 bp | GTCGGAGTGGCTGGCCCTGCGGCGCAGCCCTGGAGTGCCCGGTGCTaGCGAGGGTGCTCCCGCGGGGCCGGGCTCCAGCTGGCCACCGTT | + |
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Preference number: 1 (lower is better) Translates to: VGVAGPAAQPWSARC*RGCSRGAGLQLATV Trigger: AACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTCGCCAGCACCGGGCACTCCAGGGCTGCGCCGCAGGGCCAGCCACTCCGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR GCA 90 bp | GGTGCTCCCGCGGGGCCGGGCTCCAGCTGGCCACCGTTGCGGTTGTaGGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTTGCGCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GAPAGPGSSWPPLRL*GRMSVARWKRLRSS Trigger: GCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR TCA 90 bp | CGGGGCCGGGCTCCAGCTGGCCACCGTTGCGGTTGTGCGGCCGGATaGGCGTGGCGCGGTGGAAGCGGTTGCGCAGCAGCGCCCCTACTG | + |
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Preference number: 1 (lower is better) Translates to: RGRAPAGHRCGCAAG*AWRGGSGCAAAPLL Trigger: CAGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR GCA 90 bp | AGCCATCGGGACCCGTGCTGCTCTTATTGCACAGGCGGCCCACAGTaGCTGCCGAGTCCAGGCGCGGCTCGCGCTCACAGAAGTCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SHRDPCCSYCTGGPQ*LPSPGAARAHRSRE Trigger: CTCCCGACTTCTGTGAGCGCGAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTCCCGATGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CCA 90 bp | AGAGCCAACCACCTCTCTCAGGAGCCAAGGCTGCTGCTTGCTGCCTaGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAA | + |
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Preference number: 1 (lower is better) Translates to: RANHLSQEPRLLLAA*LRSASGRSQAPRGQ Trigger: TTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGCAGCAAGCAGCAGCCTTGGCTCCTGAGAGAGGTGGTTGGCTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR CCA 90 bp | GTAGGCATGCCAGGCTGGGCTGCTTTGGTGACCTGTCCTAGGGTGTaGAACAGTCTCCACTATCACCCCCAGCTGTCTGAGCTAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: VGMPGWAALVTCPRV*NSLHYHPQLSELGT Trigger: TGTTCCTAGCTCAGACAGCTGGGGGTGATAGTGGAGACTGTTCCACACCCTAGGACAGGTCACCAAAGCAGCCCAGCCTGGCATGCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR CCA 90 bp | TTCTTCCCCGGTGCCCATCAGCTTCAGTGCATTGCCTATCACTCCTaGGGAAGGGAAGAAGAGATGACAGGAGGTAGGCATGCCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: FFPGAHQLQCIAYHS*GREEEMTGGRHARL Trigger: CAGCCTGGCATGCCTACCTCCTGTCATCTCTTCTTCCCTTCCCCAGGAGTGATAGGCAATGCACTGAAGCTGATGGGCACCGGGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR CAA 90 bp | GAGGGTGCTCCCGCGGGGCCGGGCTCCAGCTGGCCACCGTTGCGGTaGTGCGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTTGCGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EGAPAGPGSSWPPLR*CGRMSVARWKRLRS Trigger: GCTGCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CAA 90 bp | GCTGGCGAGGGTGCTCCCGCGGGGCCGGGCTCCAGCTGGCCACCGTaGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTTG | + |
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Preference number: 2 (lower is better) Translates to: AGEGAPAGPGSSWPP*RLCGRMSVARWKRL Trigger: CAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTCGCCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CAA 90 bp | CCGTTGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTaGCGCAGCAGCGCCCCTACTGTGCGGAACTCAGGCGTCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PLRLCGRMSVARWKR*RSSAPTVRNSGVTC Trigger: GCAGGTGACGCCTGAGTTCCGCACAGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGCGGCTCGCGCTCACAGAATGAGCGTGGCGCGGTaGAAGCGGTTGCGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CTGGPQCLPSPGAARAHRMSVAR*KRLRSS Trigger: GCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCAT...TCTGTGAGCGCGAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACCGTTGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTTGCGGAGCTGGCAGCTGCCTaGGGTGCCGTGGCATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: ATVAVVRPDERGAVEAVAELAAA*GAVAFA Trigger: TGCAAATGCCACGGCACCTCAGGCAGCTGCCAGCTC...CGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTATTGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGCGGCTCGCGCTCGCGGTGGAAGCGGTTaGGCAGCAGCGCCCCTACTG | + |
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Preference number: 2 (lower is better) Translates to: SYCTGGPQCLPSPGAARARGGSG*AAAPLL Trigger: CAGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCG...AGCGCGAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCGTGCTGCTCTTATTGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGGGCCGGGCTCCAGCTaGCCACCGTTGCGGTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: DPCCSYCTGGPQCLPSPGGPGSS*PPLRLC Trigger: GCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCC...GCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTCTTATTGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGCGGCTAACTCAGGCGTCACCTaGCAGCAGGTCTTGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CCSYCTGGPQCLPSPGAANSGVT*QQVLSW Trigger: CCAGCTCAAGACCTGCTGGCAGGTGACGCCTGAGTT...AGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGACAGGAGCAGAGGTCTGGAGCCCTTAGAGTCACTTCAGCCCGATGACGGCCTCAGGAGCCAAGGCTaGTGCTTGCTGCCTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: KDRSRGLEPLESLQPDDGLRSQG*CLLPGS Trigger: TGAGCCAGGCAGCAAGCAGCAGCCTTGGCTCCTGAG...GCCGTCATCGGGCTGAAGTGACTCTAAGGGCTCCAGACCTCTGCTCCTGTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR-3UTR TCA 90 bp | CCGGTGCCCATCAGCTTCAGTGCATTGCCTATCACTCCTGGGGAAGGGAAGAAGTCACCCCCAGCTGTCTaGGCTAGGAACAGAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PVPISFSALPITPGEGKKSPPAV*ARNRKR Trigger: CCTCTTTCTGTTCCTAGCTCAGACAGCTGGGGGTGA...CTTCTTCCCTTCCCCAGGAGTGATAGGCAATGCACTGAAGCTGATGGGCACCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR GCA 72 bp | GCGGCGCAGCCCTGGAGTGCCCGGTGCTGGCGAGGGTaGTCCCGCGGGGCCGGGCTCCAGCTGGCCACCGTT | + |
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Preference number: 3 (lower is better) Translates to: AAQPWSARCWRG*SRGAGLQLATV Trigger: AACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTCGCCAGCACCGGGCACTCCAGGGCTGCGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR GCA 72 bp | GCGGGGCCGGGCTCCAGCTGGCCACCGTTGCGGTTGTaGGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTTG | + |
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Preference number: 3 (lower is better) Translates to: AGPGSSWPPLRL*GRMSVARWKRL Trigger: CAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR TCA 72 bp | GCTCCAGCTGGCCACCGTTGCGGTTGTGCGGCCGGATaGGCGTGGCGCGGTGGAAGCGGTTGCGCAGCAGCG | + |
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Preference number: 3 (lower is better) Translates to: APAGHRCGCAAG*AWRGGSGCAAA Trigger: CGCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR-3UTR CAA 90 bp | TCGGGACCCGTGCTGCTCTTATTGCACAGGCGGCCCACAGTGCCTGCCGAGTCCGCGCGGTGGAAGCGGTaGCGCAGCAGCGCCCCTACT | + |
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Preference number: 3 (lower is better) Translates to: SGPVLLLLHRRPTVPAESARWKR*RSSAPT Trigger: AGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCGC...GGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTCCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR GCA 72 bp | GACCCGTGCTGCTCTTATTGCACAGGCGGCCCACAGTaGCTGCCGAGTCCAGGCGCGGCTCGCGCTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: DPCCSYCTGGPQ*LPSPGAARAHR Trigger: TCTGTGAGCGCGAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR GCA 72 bp | TGCTGCCGCAGCCATCGGGACCCGTGCTGCTCTTATTaGACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: CCRSHRDPCCSY*TGGPQCLPSPG Trigger: GCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTCCCGATGGCTGCGGCAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR GCA 72 bp | ATTTCTCAAAGTAGACCAGGTCGGAGTGGCTGGCCCTaGGGCGCAGCCCTGGAGTGCCCGGTGCTGGCGAGG | + |
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Preference number: 3 (lower is better) Translates to: ISQSRPGRSGWP*GAALECPVLAR Trigger: CCTCGCCAGCACCGGGCACTCCAGGGCTGCGCCGCAGGGCCAGCCACTCCGACCTGGTCTACTTTGAGAAAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CCA 72 bp | CGGGAGATTTCTCAAAGTAGACCAGGTCGGAGTGGCTaGCCCTGCGGCGCAGCCCTGGAGTGCCCGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: REISQSRPGRSG*PCGAALECPVL Trigger: CAGCACCGGGCACTCCAGGGCTGCGCCGCAGGGCCAGCCACTCCGACCTGGTCTACTTTGAGAAATCTCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CCA 72 bp | CACCTCTCTCAGGAGCCAAGGCTGCTGCTTGCTGCCTaGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: HLSQEPRLLLAA*LRSASGRSQAP Trigger: TGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGCAGCAAGCAGCAGCCTTGGCTCCTGAGAGAGGTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR CCA 72 bp | CCAGGCTGGGCTGCTTTGGTGACCTGTCCTAGGGTGTaGAACAGTCTCCACTATCACCCCCAGCTGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PGWAALVTCPRV*NSLHYHPQLSE Trigger: CTCAGACAGCTGGGGGTGATAGTGGAGACTGTTCCACACCCTAGGACAGGTCACCAAAGCAGCCCAGCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR CCA 72 bp | GGTGCCCATCAGCTTCAGTGCATTGCCTATCACTCCTaGGGAAGGGAAGAAGAGATGACAGGAGGTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: GAHQLQCIAYHS*GREEEMTGGRH Trigger: ATGCCTACCTCCTGTCATCTCTTCTTCCCTTCCCCAGGAGTGATAGGCAATGCACTGAAGCTGATGGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| 3UTR CAA 72 bp | CCCGCGGGGCCGGGCTCCAGCTGGCCACCGTTGCGGTaGTGCGGCCGGATGAGCGTGGCGCGGTGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PAGPGSSWPPLR*CGRMSVARWKR Trigger: CCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CAA 72 bp | GGTGCTCCCGCGGGGCCGGGCTCCAGCTGGCCACCGTaGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GAPAGPGSSWPP*RLCGRMSVARW Trigger: CCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS-3UTR GCA 90 bp | ACCAGGTCGGAGTGGCTGGCCCTGCGGCGCAGCCCTGGAGTGCCCGGTGCTGGCACACACACCTCCATCTaGCGCCGGCTCAGGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: TRSEWLALRRSPGVPGAGTHTSI*RRLRPG Trigger: GCCCGGCCTGAGCCGGCGGCAGATGGAGGTGTGTGT...GCCAGCACCGGGCACTCCAGGGCTGCGCCGCAGGGCCAGCCACTCCGACCTGGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS-3UTR CCA 90 bp | ACCAGGTCGGAGTGGCTGGCCCTGCGGCGCAGCCCTGGAGTGCCCGGTGCTGGCGCGATCTGGATGCCCTaGATAGCAGAGGCGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: TRSEWLALRRSPGVPGAGAIWMP*IAEAAT Trigger: CGTGGCCGCCTCTGCTATCCAGGGCATCCAGATCGC...GCCAGCACCGGGCACTCCAGGGCTGCGCCGCAGGGCCAGCCACTCCGACCTGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS-3UTR TCA 90 bp | GGCTCCAGCTGGCCACCGTTGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTGGCATCACCGCCTCGGCTaGAGATGGGGCTCTCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GSSWPPLRLCGRMSVARWHHRLG*RWGSRR Trigger: CCTACGAGAGCCCCATCTTCAGCCGAGGCGGTGATG...CCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS-3UTR CCA 90 bp | CCGGGCTCCAGCTGGCCACCGTTGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTCCGAGTCTCCAGGCTaGAGCAGTTCCAGCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PGSSWPPLRLCGRMSVARSESPG*SSSSAG Trigger: ACCAGCGCTGGAACTGCTCCAGCCTGGAGACTCGGA...CCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGAGCCCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CAA 72 bp | TTGTGCGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTaGCGCAGCAGCGCCCCTACTGTGCGGAACTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LCGRMSVARWKR*RSSAPTVRNSG Trigger: GCCTGAGTTCCGCACAGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS-3UTR CCA 90 bp | CCACCGTTGCGGTTGTGCGGCCGGATGAGCGTGGCGCGGTGGAAGCGGTTGCGCGCTGGCACTCATGGATaGCGATCTGGATGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PPLRLCGRMSVARWKRLRAGTHG*RSGCPG Trigger: TCCAGGGCATCCAGATCGCCATCCATGAGTGCCAGC...GCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACAACCGCAACGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| 3UTR CAA 72 bp | ATGCTGCCGCAGCCATCGGGACCCGTGCTGCTCTTATaGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MLPQPSGPVLLL*HRRPTVPAESR Trigger: CCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTCCCGATGGCTGCGGCAGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS-3UTR GCA 90 bp | GCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCACAGGCGGCCCACAGTaGCTGCCGAGTCCAGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: AWLRSASGRSQAPRGQPFTGGPQ*LPSPGA Trigger: CGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGT...GAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR TCA 90 bp | TGCTGCTCTTATTGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGCGGCTACACTGTGTTGGCGTTaGGCACGGGCTCTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: CCSYCTGGPQCLPSPGAATLCWR*ARALGV Trigger: TACCCCCAGAGCCCGTGCTCAACGCCAACACAGTGT...AGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS-3UTR GCA 90 bp | TTGCTGCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCCACCGTTGCGGTTGTaGGGCCGGATGAGCGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLPGSDPLAAEARHQEDNPPLRL*GRMSVA Trigger: CGCCACGCTCATCCGGCCGCACAACCGCAACGGTGG...GTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGCAGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | CTGGACTGTCTGGTGATTGTAGACCCTCGGGGCTGTAAGAGCCAACCACCTCTCGCGGCCCACAGTGCCTaGCGAGTCCAGGCGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LDCLVIVDPRGCKSQPPLAAHSA*RVQARL Trigger: GAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGC...GAGAGGTGGTTGGCTCTTACAGCCCCGAGGGTCTACAATCACCAGACAGTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR TCA 90 bp | GCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCGATGTCGTTGGGTGCTaGCCTGGGCACAGCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AWLRSASGRSQAPRGQPFDVVGC*PGHSGS Trigger: GCTGCCGCTGTGCCCAGGTCAGCACCCAACGACATC...GAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | AAAGACAGGAGCAGAGGTCTGGAGCCCTTAGAGTCACTTCAGCCCGATGACGGCACACACACCTCCATCTaGCGCCGGCTCAGGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: KDRSRGLEPLESLQPDDGTHTSI*RRLRPG Trigger: GCCCGGCCTGAGCCGGCGGCAGATGGAGGTGTGTGT...GCCGTCATCGGGCTGAAGTGACTCTAAGGGCTCCAGACCTCTGCTCCTGTCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | AAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCAGAGGAGCTTGGGTCTGCGCGGTGGAAGCGGTTaGGCAGCAGCGCCCCTACTG | + |
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Preference number: 4 (lower is better) Translates to: KPGTKRTTILETQRSLGLRGGSG*AAAPLL Trigger: CAGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCG...CAGACCCAAGCTCCTCTGGGTCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | TTGCTGCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACTCCGAGTCTCCAGGCTaGAGCAGTTCCAGCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLPGSDPLAAEARHQEDNSESPG*SSSSAG Trigger: ACCAGCGCTGGAACTGCTCCAGCCTGGAGACTCGGA...GTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGCAGCAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | AAAGACAGGAGCAGAGGTCTGGAGCCCTTAGAGTCACTTCAGCCCGATGACGGCCCAGAGCGCACGCGTTaGACACTGCGTGCACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KDRSRGLEPLESLQPDDGPERTR*TLRAPP Trigger: GGGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGG...GCCGTCATCGGGCTGAAGTGACTCTAAGGGCTCCAGACCTCTGCTCCTGTCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | CTGGACTGTCTGGTGATTGTAGACCCTCGGGGCTGTAAGAGCCAACCACCTCTCCGCTCGCTGCGCGTCTaGCGCAGAATGTTGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LDCLVIVDPRGCKSQPPLRSLRV*RRMLWP Trigger: CGGCCACAACATTCTGCGCCAGACGCGCAGCGAGCG...GAGAGGTGGTTGGCTCTTACAGCCCCGAGGGTCTACAATCACCAGACAGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | CCGGTGCCCATCAGCTTCAGTGCATTGCCTATCACTCCTGGGGAAGGGAAGAAGTGCAGCGCGTCCAGCTaGAAGCGGTGCAGCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: PVPISFSALPITPGEGKKCSASS*KRCSFR Trigger: TCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCA...CTTCTTCCCTTCCCCAGGAGTGATAGGCAATGCACTGAAGCTGATGGGCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | CTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCTTGAGACGTTGGGTGCTGACCTaGGCACAGCGGCAGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRSASGRSQAPRGQPFLRRWVLT*AQRQPA Trigger: TGCTGGCTGCCGCTGTGCCCAGGTCAGCACCCAACG...TCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | GTGTGGAACAGTCTCCACTATCACCCCCAGCTGTCTGAGCTAGGAACAGAAAGAGGGCCGGGCTCCAGCTaGCCACCGTTGCGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWNSLHYHPQLSELGTERGPGSS*PPLRLC Trigger: GCACAACCGCAACGGTGGCCAGCTGGAGCCCGGCCC...TCTTTCTGTTCCTAGCTCAGACAGCTGGGGGTGATAGTGGAGACTGTTCCACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR TCA 90 bp | AAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCAGAGGAGCTTGGGTCTGGAGCTGGCAGCTGCCTaGGGTGCCGTGGCATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: KPGTKRTTILETQRSLGLELAAA*GAVAFA Trigger: TGCAAATGCCACGGCACCTCAGGCAGCTGCCAGCTC...CAGACCCAAGCTCCTCTGGGTCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | GTGTGGAACAGTCTCCACTATCACCCCCAGCTGTCTGAGCTAGGAACAGAAAGAGGCCACAGCACATGCTaGCGCAGCCATCGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VWNSLHYHPQLSELGTERGHSTC*RSHRDP Trigger: CGGGTCCCGATGGCTGCGGCAGCATGTGCTGTGGCC...TCTTTCTGTTCCTAGCTCAGACAGCTGGGGGTGATAGTGGAGACTGTTCCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | CTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCTTGAGAGCGATCTGGATGCCCTaGATAGCAGAGGCGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LRSASGRSQAPRGQPFLRAIWMP*IAEAAT Trigger: CGTGGCCGCCTCTGCTATCCAGGGCATCCAGATCGC...TCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | CTGGACTGTCTGGTGATTGTAGACCCTCGGGGCTGTAAGAGCCAACCACCTCTCGGAGTCCTGCAGACCTaGGCTGGCAGGAAGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDCLVIVDPRGCKSQPPLGVLQT*AGRKYG Trigger: GCCATACTTCCTGCCAGCCCAGGTCTGCAGGACTCC...GAGAGGTGGTTGGCTCTTACAGCCCCGAGGGTCTACAATCACCAGACAGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | AAAGACAGGAGCAGAGGTCTGGAGCCCTTAGAGTCACTTCAGCCCGATGACGGCTGGCGCAGAATGTTGTaGCCGCGGCCACAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: KDRSRGLEPLESLQPDDGWRRML*PRPQHM Trigger: CATGTGCTGTGGCCGCGGCCACAACATTCTGCGCCA...GCCGTCATCGGGCTGAAGTGACTCTAAGGGCTCCAGACCTCTGCTCCTGTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | GTGTGGAACAGTCTCCACTATCACCCCCAGCTGTCTGAGCTAGGAACAGAAAGACAGTGGAACCGGCAGTaGCAGCGCTCGCTGCGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VWNSLHYHPQLSELGTERQWNRQ*QRSLRV Trigger: GACGCGCAGCGAGCGCTGCCACTGCCGGTTCCACTG...TCTTTCTGTTCCTAGCTCAGACAGCTGGGGGTGATAGTGGAGACTGTTCCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | AGTCTCCACTATCACCCCCAGCTGTCTGAGCTAGGAACAGAAAGAGGGGAACCTCACTCCCAGGAGTCCTaGAGACCTGGGCTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLHYHPQLSELGTERGEPHSQES*RPGLAG Trigger: TCCTGCCAGCCCAGGTCTGCAGGACTCCTGGGAGTG...AGGTTCCCCTCTTTCTGTTCCTAGCTCAGACAGCTGGGGGTGATAGTGGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | TTGCTGCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACAGGTGCCGTGGCATTTaGACTTACGCCGCATGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLPGSDPLAAEARHQEDNRCRGI*TYAACS Trigger: AGAACATGCGGCGTAAGTGCAAATGCCACGGCACCT...GTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | CCGGTGCCCATCAGCTTCAGTGCATTGCCTATCACTCCTGGGGAAGGGAAGAAGGGCAGCTGCCTGAGGTaGCGTGGCATTTGCACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PVPISFSALPITPGEGKKGSCLR*RGICTY Trigger: GTAAGTGCAAATGCCACGGCACCTCAGGCAGCTGCC...CTTCTTCCCTTCCCCAGGAGTGATAGGCAATGCACTGAAGCTGATGGGCACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | AGTCTCCACTATCACCCCCAGCTGTCTGAGCTAGGAACAGAAAGAGGGGAACCTGGCCCAGGATGTCGTTaGGTGCTGACCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHYHPQLSELGTERGEPGPGCR*VLTWAQ Trigger: CTGTGCCCAGGTCAGCACCCAACGACATCCTGGGCC...AGGTTCCCCTCTTTCTGTTCCTAGCTCAGACAGCTGGGGGTGATAGTGGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR TCA 90 bp | AAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCAGAGGAGCTTGGGTCTGCTCGAAAACCTCGGCTaGAGATGGGGCTCTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPGTKRTTILETQRSLGLLENLG*RWGSRR Trigger: CCTACGAGAGCCCCATCTTCAGCCGAGGTTTTCGAG...CAGACCCAAGCTCCTCTGGGTCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR TCA 90 bp | CTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCTTGAGAGCATGGATGTCTCTGTaGGGCTCTCGGGAGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRSASGRSQAPRGQPFLRAWMSL*GSRESR Trigger: TCTGGACTCCCGAGAGCCTCACAGAGACATCCATGC...TCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | AGTCTCCACTATCACCCCCAGCTGTCTGAGCTAGGAACAGAAAGAGGGGAACCTCCGTGCTGCTCTTATTaGACAGGCGGCCCACAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SLHYHPQLSELGTERGEPPCCSY*TGGPQC Trigger: GCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGG...AGGTTCCCCTCTTTCTGTTCCTAGCTCAGACAGCTGGGGGTGATAGTGGAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR TCA 90 bp | ACTGGTTTATTGTCCATGTCCCTTAATCAGCCTGTAGACTCCGGAGCTTCTTTTGGTTGTGCGGCCGGATaGGCGTGGCGCGGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLSMSLNQPVDSGASFGCAAG*AWRGGS Trigger: GCTTCCACCGCGCCACGCTCATCCGGCCGCACAACC...AAAAGAAGCTCCGGAGTCTACAGGCTGATTAAGGGACATGGACAATAAACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCTGCTTTGGTGACCTGTCCTAGGGTGTGGAACAGTCTCCACTATCACTCATGGATGGCGATCTaGATGCCCTGGATAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWAALVTCPRVWNSLHYHSWMAI*MPWIAE Trigger: CTCTGCTATCCAGGGCATCCAGATCGCCATCCATGA...GTGATAGTGGAGACTGTTCCACACCCTAGGACAGGTCACCAAAGCAGCCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | ACTGGTTTATTGTCCATGTCCCTTAATCAGCCTGTAGACTCCGGAGCTTCTTTTATGAGCGTGGCGCGGTaGAAGCGGTTGCGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TGLLSMSLNQPVDSGASFMSVAR*KRLRSS Trigger: GCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCAT...AAAAGAAGCTCCGGAGTCTACAGGCTGATTAAGGGACATGGACAATAAACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | ACTGGTTTATTGTCCATGTCCCTTAATCAGCCTGTAGACTCCGGAGCTTCTTTTAGTGGCAGCGCTCGCTaGGCGTCTGGCGCAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: TGLLSMSLNQPVDSGASFSGSAR*ASGAEC Trigger: ACATTCTGCGCCAGACGCGCAGCGAGCGCTGCCACT...AAAAGAAGCTCCGGAGTCTACAGGCTGATTAAGGGACATGGACAATAAACCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR TCA 90 bp | ACTGGTTTATTGTCCATGTCCCTTAATCAGCCTGTAGACTCCGGAGCTTCTTTTACACTGTGTTGGCGTTaGGCACGGGCTCTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: TGLLSMSLNQPVDSGASFTLCWR*ARALGV Trigger: TACCCCCAGAGCCCGTGCTCAACGCCAACACAGTGT...AAAAGAAGCTCCGGAGTCTACAGGCTGATTAAGGGACATGGACAATAAACCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR GCA 90 bp | AATAAATATCTGTTAAGTGAAAGACAGGAGCAGAGGTCTGGAGCCCTTAGAGTCAACTCAGGCGTCACCTaGCAGCAGGTCTTGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NKYLLSERQEQRSGALRVNSGVT*QQVLSW Trigger: CCAGCTCAAGACCTGCTGGCAGGTGACGCCTGAGTT...GACTCTAAGGGCTCCAGACCTCTGCTCCTGTCTTTCACTTAACAGATATTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CCA 90 bp | AATAAATATCTGTTAAGTGAAAGACAGGAGCAGAGGTCTGGAGCCCTTAGAGTCGCTGGCACTCATGGATaGCGATCTGGATGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NKYLLSERQEQRSGALRVAGTHG*RSGCPG Trigger: TCCAGGGCATCCAGATCGCCATCCATGAGTGCCAGC...GACTCTAAGGGCTCCAGACCTCTGCTCCTGTCTTTCACTTAACAGATATTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 90 bp | CACAGCACATGCTGCCGCAGCCATCGGGACCCGTGCTGCTCTTATTaGACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGCGGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: HSTCCRSHRDPCCSY*TGGPQCLPSPGAAR Trigger: GCGAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTCCCGATGGCTGCGGCAGCATGTGCTGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 90 bp | AGACCTGGGCTGGCAGGAAGTATGGCCGGGTGTTCAGGGACCCCGTaGCTCAAGCCCTTTCCGCGCTGCAGCGCGTCCAGCTGCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPGLAGSMAGCSGTP*LKPFPRCSASSCKR Trigger: CCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGGCTTGAGCCACGGGGTCCCTGAACACCCGGCCATACTTCCTGCCAGCCCAGGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | TGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGCGGCTCGCGCTCACAGAGTCAGGCACACTGTGTaGGCGTTGAGCACGGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: CTGGPQCLPSPGAARAHRVRHTV*ALSTGS Trigger: AGAGCCCGTGCTCAACGCCAACACAGTGTGCCTGAC...TCTGTGAGCGCGAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS GCA 90 bp | GGGACCCCGTGGCTCAAGCCCTTTCCGCGCTGCAGCGCGTCCAGCTaGAAGCGGTGCAGCTTCCGACGGAAAGCTTCTTCGTCCCCACGT | + |
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Preference number: 5 (lower is better) Translates to: GTPWLKPFPRCSASS*KRCSFRRKASSSPR Trigger: ACGTGGGGACGAAGAAGCTTTCCGTCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGGCTTGAGCCACGGGGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 90 bp | ATGGCCGGGTGTTCAGGGACCCCGTGGCTCAAGCCCTTTCCGCGCTaGAGCGCGTCCAGCTGCAAGCGGTGCAGCTTCCGACGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MAGCSGTPWLKPFPR*SASSCKRCSFRRKA Trigger: AGCTTTCCGTCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGGCTTGAGCCACGGGGTCCCTGAACACCCGGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 90 bp | CACATCCGGACTGCAGCCACCCCACTCCCAGGAGTCCTGCAGACCTaGGCTGGCAGGAAGTATGGCCGGGTGTTCAGGGACCCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HIRTAATPLPGVLQT*AGRKYGRVFRDPVA Trigger: AGCCACGGGGTCCCTGAACACCCGGCCATACTTCCTGCCAGCCCAGGTCTGCAGGACTCCTGGGAGTGGGGTGGCTGCAGTCCGGATGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | GCGGTGGAAGCGGTTGCGCAGCAGCGCCCCTACTGTGCGGAACTCAGGCGTCACCACACTGTGTTGGCGTaGAGCACGGGCTCTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVEAVAQQRPYCAELRRHHTVLA*STGSGG Trigger: ACCCCCAGAGCCCGTGCTCAACGCCAACACAGTGTG...GTGACGCCTGAGTTCCGCACAGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187238.2 |
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| CDS GCA 90 bp | TGGCTCAAGCCCTTTCCGCGCTGCAGCGCGTCCAGCTGCAAGCGGTaGAGCTTCCGACGGAAAGCTTCTTCGTCCCCACGTCTGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WLKPFPRCSASSCKR*SFRRKASSSPRLEA Trigger: CGCCTCCAGACGTGGGGACGAAGAAGCTTTCCGTCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGGCTTGAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | TTGCTGCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACGCGCGGTGGAAGCGGTaGCGCAGCAGCGCCCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: LLPGSDPLAAEARHQEDNARWKR*RSSAPT Trigger: AGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCGC...GTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGCAGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 90 bp | AGGCGTCGCAACCGCAAGCCTTCAGTTTACCCAGAGCGCACGCGTTaGACACTGCGTGCACCACCCCGGCAGCTGCTATGGCGTAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RRRNRKPSVYPERTR*TLRAPPRQLLWRRR Trigger: TCGCCTACGCCATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGGTAAACTGAAGGCTTGCGGTTGCGACGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | GCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCTGGCCACCGTTGCGGTaGTGCGGCCGGATGAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AWLRSASGRSQAPRGQPFWPPLR*CGRMSV Trigger: CACGCTCATCCGGCCGCACAACCGCAACGGTGGCCA...GAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 90 bp | ACCCAGAGCGCACGCGTTGGACACTGCGTGCACCACCCCGGCAGCTaGTATGGCGTAGGCGAAAGCACTCTCTCGAAAACCTCGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TQSARVGHCVHHPGS*YGVGESTLSKTSAE Trigger: TTCAGCCGAGGTTTTCGAGAGAGTGCTTTCGCCTACGCCATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 90 bp | GCAACCGCAAGCCTTCAGTTTACCCAGAGCGCACGCGTTGGACACTaGGTGCACCACCCCGGCAGCTGCTATGGCGTAGGCGAAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ATASLQFTQSARVGH*VHHPGSCYGVGEST Trigger: AGTGCTTTCGCCTACGCCATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGGTAAACTGAAGGCTTGCGGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 90 bp | GCAAGCGGTGCAGCTTCCGACGGAAAGCTTCTTCGTCCCCACGTCTaGAGGCGTCGCAACCGCAAGCCTTCAGTTTACCCAGAGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: ASGAASDGKLLRPHV*RRRNRKPSVYPERT Trigger: CGTGCGCTCTGGGTAAACTGAAGGCTTGCGGTTGCGACGCCTCCAGACGTGGGGACGAAGAAGCTTTCCGTCGGAAGCTGCACCGCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | GGCTGGGCTGCTTTGGTGACCTGTCCTAGGGTGTGGAACAGTCTCCACTATCACCCCAGAGCGCACGCGTaGGACACTGCGTGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GWAALVTCPRVWNSLHYHPRAHA*DTACTT Trigger: GGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGG...GTGATAGTGGAGACTGTTCCACACCCTAGGACAGGTCACCAAAGCAGCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | GCCTGGCTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCGTCAGGCACACTGTGTaGGCGTTGAGCACGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AWLRSASGRSQAPRGQPFVRHTV*ALSTGS Trigger: AGAGCCCGTGCTCAACGCCAACACAGTGTGCCTGAC...GAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAGCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCAGAGGAGCTTGGGTCTGTCCAGCTGGCCACCGTaGCGGTTGTGCGGCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPGTKRTTILETQRSLGLSSWPP*RLCGRM Trigger: CATCCGGCCGCACAACCGCAACGGTGGCCAGCTGGA...CAGACCCAAGCTCCTCTGGGTCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCAGAGGAGCTTGGGTCTGGTCTGGCGCAGAATGTaGTGGCCGCGGCCACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KPGTKRTTILETQRSLGLVWRRM*WPRPQH Trigger: GTGCTGTGGCCGCGGCCACAACATTCTGCGCCAGAC...CAGACCCAAGCTCCTCTGGGTCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCAGAGGAGCTTGGGTCTGAGGCCCAGGATGTCGTaGGGTGCTGACCTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KPGTKRTTILETQRSLGLRPRMS*GADLGT Trigger: TGTGCCCAGGTCAGCACCCAACGACATCCTGGGCCT...CAGACCCAAGCTCCTCTGGGTCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCAGAGGAGCTTGGGTCTGCACACTGTGTTGGCGTaGAGCACGGGCTCTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPGTKRTTILETQRSLGLHTVLA*STGSGG Trigger: ACCCCCAGAGCCCGTGCTCAACGCCAACACAGTGTG...CAGACCCAAGCTCCTCTGGGTCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | CTCAGATCCGCTAGCGGCAGAAGCCAGGCACCAAGAGGACAACCATTCTTGAGACCCGTGCTGCTCTTATaGCACAGGCGGCCCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: LRSASGRSQAPRGQPFLRPVLLL*HRRPTV Trigger: CACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGG...TCTCAAGAATGGTTGTCCTCTTGGTGCCTGGCTTCTGCCGCTAGCGGATCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS-3UTR CAA 90 bp | ACTGGTTTATTGTCCATGTCCCTTAATCAGCCTGTAGACTCCGGAGCTTCTTTTGAGGTGCCGTGGCATTaGCACTTACGCCGCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: TGLLSMSLNQPVDSGASFEVPWH*HLRRMF Trigger: GAACATGCGGCGTAAGTGCAAATGCCACGGCACCTC...AAAAGAAGCTCCGGAGTCTACAGGCTGATTAAGGGACATGGACAATAAACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 72 bp | AGGAAGAACAGGAGCGCCCAGAACTCAGGCCGCGGCTaGGGCCCTTGTGGGAGCCGCAGCCAGGGGCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RKNRSAQNSGRG*GPCGSRSQGRG Trigger: CCCTCGCCCCTGGCTGCGGCTCCCACAAGGGCCCCAGCCGCGGCCTGAGTTCTGGGCGCTCCTGTTCTTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CAA 90 bp | CCACAGCACATGCTGCCGCAGCCATCGGGACCCGTGCTGCTCTTATaGCACAGGCGGCCCACAGTGCCTGCCGAGTCCAGGCGCGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PQHMLPQPSGPVLLL*HRRPTVPAESRRGS Trigger: CGAGCCGCGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTCCCGATGGCTGCGGCAGCATGTGCTGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 72 bp | CTGGCAGGAAGTATGGCCGGGTGTTCAGGGACCCCGTaGCTCAAGCCCTTTCCGCGCTGCAGCGCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LAGSMAGCSGTP*LKPFPRCSASS Trigger: GCTGGACGCGCTGCAGCGCGGAAAGGGCTTGAGCCACGGGGTCCCTGAACACCCGGCCATACTTCCTGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CAA 72 bp | CTCAGGCCGGGCAATGTCAGGCACACTGTGTTGGCGTaGAGCACGGGCTCTGGGGGTAGGCGGAGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRPGNVRHTVLA*STGSGGRRRPR Trigger: CCTGGGCCTCCGCCTACCCCCAGAGCCCGTGCTCAACGCCAACACAGTGTGCCTGACATTGCCCGGCCTGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006718.15 ENSMUST00000187238.2 |
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| CDS TCA 72 bp | TCAGGCCGGGCAATGTCAGGCACACTGTGTTGGCGTTaGGCACGGGCTCTGGGGGTAGGCGGAGGCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGRAMSGTLCWR*ARALGVGGGPG Trigger: TCCTGGGCCTCCGCCTACCCCCAGAGCCCGTGCTCAACGCCAACACAGTGTGCCTGACATTGCCCGGCCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006718.15 ENSMUST00000187238.2 |
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| CDS TCA 72 bp | TGGATGCCCTGGATAGCAGAGGCGGCCACGTCAGGGTaGCGCACACACACCTCCATCTGCCGCCGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: WMPWIAEAATSG*RTHTSICRRLR Trigger: CCTGAGCCGGCGGCAGATGGAGGTGTGTGTGCGTCACCCTGACGTGGCCGCCTCTGCTATCCAGGGCATCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006718.15 ENSMUST00000187238.2 |
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| CDS GCA 72 bp | TGTTCAGGGACCCCGTGGCTCAAGCCCTTTCCGCGCTaGAGCGCGTCCAGCTGCAAGCGGTGCAGCTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CSGTPWLKPFPR*SASSCKRCSFR Trigger: TCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGGCTTGAGCCACGGGGTCCCTGAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 72 bp | CCCTTTCCGCGCTGCAGCGCGTCCAGCTGCAAGCGGTaGAGCTTCCGACGGAAAGCTTCTTCGTCCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: PFPRCSASSCKR*SFRRKASSSPR Trigger: ACGTGGGGACGAAGAAGCTTTCCGTCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 72 bp | ACATCCGGACTGCAGCCACCCCACTCCCAGGAGTCCTaGAGACCTGGGCTGGCAGGAAGTATGGCCGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TSGLQPPHSQES*RPGLAGSMAGC Trigger: ACACCCGGCCATACTTCCTGCCAGCCCAGGTCTGCAGGACTCCTGGGAGTGGGGTGGCTGCAGTCCGGATGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 72 bp | AGCCTTCAGTTTACCCAGAGCGCACGCGTTGGACACTaGGTGCACCACCCCGGCAGCTGCTATGGCGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLQFTQSARVGH*VHHPGSCYGVG Trigger: GCCTACGCCATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGGTAAACTGAAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 72 bp | TGGCTCAAGCCCTTTCCGCGCTGCAGCGCGTCCAGCTaGAAGCGGTGCAGCTTCCGACGGAAAGCTTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: WLKPFPRCSASS*KRCSFRRKASS Trigger: CGAAGAAGCTTTCCGTCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGGCTTGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS GCA 72 bp | GCACGCGTTGGACACTGCGTGCACCACCCCGGCAGCTaGTATGGCGTAGGCGAAAGCACTCTCTCGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: ARVGHCVHHPGS*YGVGESTLSKT Trigger: GGTTTTCGAGAGAGTGCTTTCGCCTACGCCATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACGCGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 72 bp | CGTTGGACACTGCGTGCACCACCCCGGCAGCTGCTATaGCGTAGGCGAAAGCACTCTCTCGAAAACCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RWTLRAPPRQLL*RRRKHSLENLG Trigger: GCCGAGGTTTTCGAGAGAGTGCTTTCGCCTACGCCATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 72 bp | AACCGCAAGCCTTCAGTTTACCCAGAGCGCACGCGTTaGACACTGCGTGCACCACCCCGGCAGCTGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: NRKPSVYPERTR*TLRAPPRQLLW Trigger: CCATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGGTAAACTGAAGGCTTGCGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CAA 72 bp | CAACCGCAAGCCTTCAGTTTACCCAGAGCGCACGCGTaGGACACTGCGTGCACCACCCCGGCAGCTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: QPQAFSLPRAHA*DTACTTPAAAM Trigger: CATAGCAGCTGCCGGGGTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGGTAAACTGAAGGCTTGCGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS CCA 72 bp | GCAGCTTCCGACGGAAAGCTTCTTCGTCCCCACGTCTaGAGGCGTCGCAACCGCAAGCCTTCAGTTTACCCA | + |
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Preference number: 6 (lower is better) Translates to: AASDGKLLRPHV*RRRNRKPSVYP Trigger: TGGGTAAACTGAAGGCTTGCGGTTGCGACGCCTCCAGACGTGGGGACGAAGAAGCTTTCCGTCGGAAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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| CDS TCA 72 bp | TTGTTGTGGAGTCTCATTCGAGCATGGATGTCTCTGTaGGGCTCTCGGGAGTCCAGAAAGTCCTTAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLWSLIRAWMSL*GSRESRKSLEK Trigger: CTTCTCTAAGGACTTTCTGGACTCCCGAGAGCCTCACAGAGACATCCATGCTCGAATGAGACTCCACAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006718.15 |
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