Pregenerated sensors for WNT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022997Ensembl transcript IDs: ENSMUST00000023734.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTTCAGGAGTCCCCAGGTAGGAGGTGGGAGAGATGGATCGCTATaGACCCTGGGACTGTGGCTGGACGCGGTAGGGTGGGCAAACATC | + |
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Preference number: 1 (lower is better) Translates to: GFRSPQVGGGRDGSL*TLGLWLDAVGWANI Trigger: GATGTTTGCCCACCCTACCGCGTCCAGCCACAGTCCCAGGGTTCATAGCGATCCATCTCTCCCACCTCCTACCTGGGGACTCCTGAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 90 bp | CAGGGCCCTCAGGATGGCAAAAGGGTTCGAGCCGACTCAGGCAAGTaGTTTCAGGAGTCCCCAGGTAGGAGGTGGGAGAGATGGATCGCT | + |
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Preference number: 1 (lower is better) Translates to: QGPQDGKRVRADSGK*FQESPGRRWERWIA Trigger: AGCGATCCATCTCTCCCACCTCCTACCTGGGGACTCCTGAAACCACTTGCCTGAGTCGGCTCGAACCCTTTTGCCATCCTGAGGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR TCA 90 bp | AAAGGTCGGATAACAAAAGGACTGGCGAGCAGAACAGAGGAGCAGTaGGGTGGGGTGAGGGTGGTCTCTGCAACCCAGGCTGGAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: KGRITKGLASRTEEQ*GGVRVVSATQAGTQ Trigger: CTGGGTTCCAGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCCTCTGTTCTGCTCGCCAGTCCTTTTGTTATCCGACCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 90 bp | TCGGATAACAAAAGGACTGGCGAGCAGAACAGAGGAGCAGTGAGGTaGGGTGAGGGTGGTCTCTGCAACCCAGGCTGGAACCCAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: SDNKRTGEQNRGAVR*GEGGLCNPGWNPAQ Trigger: TTGTGCTGGGTTCCAGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCCTCTGTTCTGCTCGCCAGTCCTTTTGTTATCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 90 bp | CAATGGCTCCGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTaGGTCCAGCAACCTCCTTTCCCACTTAGCTTTCCGTGCCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: QWLRGRDKENVGFCC*VQQPPFPLSFPCPF Trigger: GAAAGGGCACGGAAAGCTAAGTGGGAAAGGAGGTTGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGGAGCCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR TCA 90 bp | TTCAACTCGGAAACTCTTCAGCTACAGGTGGGAGGGGAAAGGCCTTaGAGCCCAGAGGTGCTGGTTAGAGAACTCAAGGGACCTATAGGG | + |
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Preference number: 1 (lower is better) Translates to: FNSETLQLQVGGERP*SPEVLVRELKGPIG Trigger: CCCTATAGGTCCCTTGAGTTCTCTAACCAGCACCTCTGGGCTTCAAGGCCTTTCCCCTCCCACCTGTAGCTGAAGAGTTTCCGAGTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR GCA 90 bp | TTTTGCTGCTGGGTCCAGCAACCTCCTTTCCCACTTAGCTTTCCGTaGCCTTTCAACTCGGAAACTCTTCAGCTACAGGTGGGAGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: FCCWVQQPPFPLSFP*PFNSETLQLQVGGE Trigger: TTCCCCTCCCACCTGTAGCTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAAGTGGGAAAGGAGGTTGCTGGACCCAGCAGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 90 bp | TTAGCTTTCCGTGCCCTTTCAACTCGGAAACTCTTCAGCTACAGGTaGGAGGGGAAAGGCCTTGAAGCCCAGAGGTGCTGGTTAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LAFRALSTRKLFSYR*EGKGLEAQRCWLEN Trigger: GTTCTCTAACCAGCACCTCTGGGCTTCAAGGCCTTTCCCCTCCCACCTGTAGCTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 90 bp | GTGCAAATTATTTACACAGTGATGAGGAGGCAGGACAGGAAGGGGTaGGAGGAGGCTGAGGGAGGCATGGTTCACAGCTGTTCAATGGCT | + |
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Preference number: 1 (lower is better) Translates to: VQIIYTVMRRQDRKG*EEAEGGMVHSCSMA Trigger: AGCCATTGAACAGCTGTGAACCATGCCTCCCTCAGCCTCCTCCCACCCCTTCCTGTCCTGCCTCCTCATCACTGTGTAAATAATTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAGTGAGGTGGGGTGAGGGTGGTCTCTGCAACCCAGGCTGGAACCCAGCAGGAGGGGAAAGGCCTTaGAGCCCAGAGGTGCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: GAVRWGEGGLCNPGWNPAGGERP*SPEVLV Trigger: AACCAGCACCTCTGGGCTTCAAGGCCTTTCCCCTCC...TGCTGGGTTCCAGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGTGAGGTGGGGTGAGGGTGGTCTCTGCAACCCAGGCTGGAACCCAGCAGATCGCTATGAACCCTaGGACTGTGGCTGGACGCGG | + |
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Preference number: 2 (lower is better) Translates to: GAVRWGEGGLCNPGWNPADRYEP*DCGWTR Trigger: CCGCGTCCAGCCACAGTCCCAGGGTTCATAGCGATC...TGCTGGGTTCCAGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR CCA 90 bp | CCGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTGGGTCCAGCAACCTCCGCCGACTCAGGCAAGTaGTTTCAGGAGTCCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PRQRQGECRVLLLGPATSADSGK*FQESPG Trigger: ACCTGGGGACTCCTGAAACCACTTGCCTGAGTCGGC...GGAGGTTGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGGCGAGGAGCCACTAATAGCTACAGTGGAAGGAAATACTGATCCGGTGAGGAGGTGGGAGAGATaGATCGCTATGAACCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GGGEEPLIATVEGNTDPVRRWER*IAMNPG Trigger: CCCAGGGTTCATAGCGATCCATCTCTCCCACCTCCT...CACCGGATCAGTATTTCCTTCCACTGTAGCTATTAGTGGCTCCTCGCCCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGGCGAGGAGCCACTAATAGCTACAGTGGAAGGAAATACTGATCCGGTGACCCTCTGGCCAAATTaGGGGGCAGTGCAAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GGGEEPLIATVEGNTDPVTLWPN*GAVQKE Trigger: CTCCTTTTGCACTGCCCCCCAATTTGGCCAGAGGGT...CACCGGATCAGTATTTCCTTCCACTGTAGCTATTAGTGGCTCCTCGCCCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR CCA 90 bp | TATTTTATTCCTCAGAGGAAGATACTACATTGGTGGGGGCGAGGAGCCACTAATCTGGACGCGGTAGGGTaGGCAAACATCAGGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: YFIPQRKILHWWGRGATNLDAVG*ANIRTS Trigger: GCTGGTCCTGATGTTTGCCCACCCTACCGCGTCCAG...ATTAGTGGCTCCTCGCCCCCACCAATGTAGTATCTTCCTCTGAGGAATAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR TCA 90 bp | TATTTTATTCCTCAGAGGAAGATACTACATTGGTGGGGGCGAGGAGCCACTAATAGAGATGGATCGCTATaGACCCTGGGACTGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: YFIPQRKILHWWGRGATNRDGSL*TLGLWL Trigger: CAGCCACAGTCCCAGGGTTCATAGCGATCCATCTCT...ATTAGTGGCTCCTCGCCCCCACCAATGTAGTATCTTCCTCTGAGGAATAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR CCA 90 bp | ATAATACCCAAAGAGGTCACAGCGCAAAATACATCAGGAACCGCAACACCTTCATCCCCAGGTAGGAGGTaGGAGAGATGGATCGCTATG | + |
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Preference number: 2 (lower is better) Translates to: IIPKEVTAQNTSGTATPSSPGRR*ERWIAM Trigger: CATAGCGATCCATCTCTCCCACCTCCTACCTGGGGA...TGAAGGTGTTGCGGTTCCTGATGTATTTTGCGCTGTGACCTCTTTGGGTATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR-3UTR CCA 90 bp | TATTTTATTCCTCAGAGGAAGATACTACATTGGTGGGGGCGAGGAGCCACTAATTTCACAGCTGTTCAATaGCTCCGAGGCAGAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: YFIPQRKILHWWGRGATNFTAVQ*LRGRDK Trigger: CTTGTCTCTGCCTCGGAGCCATTGAACAGCTGTGAA...ATTAGTGGCTCCTCGCCCCCACCAATGTAGTATCTTCCTCTGAGGAATAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR TCA 72 bp | AGTCCCCAGGTAGGAGGTGGGAGAGATGGATCGCTATaGACCCTGGGACTGTGGCTGGACGCGGTAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SPQVGGGRDGSL*TLGLWLDAVGW Trigger: CCACCCTACCGCGTCCAGCCACAGTCCCAGGGTTCATAGCGATCCATCTCTCCCACCTCCTACCTGGGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR TCA 72 bp | GTAGGGTGGGCAAACATCAGGACCAGCGAGTGTGTCTaGGAACTGGAAGAGAGCGTTCCCGTTCCCGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: VGWANIRTSECV*ELEESVPVPGG Trigger: GCCTCCGGGAACGGGAACGCTCTCTTCCAGTTCTCAGACACACTCGCTGGTCCTGATGTTTGCCCACCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 72 bp | AAAAGGACTGGCGAGCAGAACAGAGGAGCAGTGAGGTaGGGTGAGGGTGGTCTCTGCAACCCAGGCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: KRTGEQNRGAVR*GEGGLCNPGWN Trigger: GTTCCAGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCCTCTGTTCTGCTCGCCAGTCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 72 bp | CGTGCCCTTTCAACTCGGAAACTCTTCAGCTACAGGTaGGAGGGGAAAGGCCTTGAAGCCCAGAGGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RALSTRKLFSYR*EGKGLEAQRCW Trigger: CCAGCACCTCTGGGCTTCAAGGCCTTTCCCCTCCCACCTGTAGCTGAAGAGTTTCCGAGTTGAAAGGGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR TCA 72 bp | ATAACAAAAGGACTGGCGAGCAGAACAGAGGAGCAGTaGGGTGGGGTGAGGGTGGTCTCTGCAACCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: ITKGLASRTEEQ*GGVRVVSATQA Trigger: AGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCCTCTGTTCTGCTCGCCAGTCCTTTTGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR GCA 72 bp | TGGCTCCGAGGCAGAGACAAGGAGAATGTAGGGTTTTaGTGCTGGGTCCAGCAACCTCCTTTCCCACTTAGC | + |
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Preference number: 3 (lower is better) Translates to: WLRGRDKENVGF*CWVQQPPFPLS Trigger: GCTAAGTGGGAAAGGAGGTTGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| 3UTR CCA 72 bp | CGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTaGGTCCAGCAACCTCCTTTCCCACTTAGCTTTCCG | + |
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Preference number: 3 (lower is better) Translates to: RGRDKENVGFCC*VQQPPFPLSFP Trigger: CGGAAAGCTAAGTGGGAAAGGAGGTTGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | CCGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTGGGTCCAGCAACCTCCGGGGCCCCGGAGCAGTaGGGCAGTTCCAGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PRQRQGECRVLLLGPATSGAPEQ*GSSSGG Trigger: ACCGCCGCTGGAACTGCCCCACTGCTCCGGGGCCCC...GGAGGTTGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | GGAGCAGTGAGGTGGGGTGAGGGTGGTCTCTGCAACCCAGGCTGGAACCCAGCATCAGCAGCTGCAGACTaGGCTCGAGCACCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GAVRWGEGGLCNPGWNPASAAAD*ARAPAA Trigger: TGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGA...TGCTGGGTTCCAGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTCCGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTGGGTCCAGCAGTTGGCAGCCAGGGCTaGGGGCAGAGCGGTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: MAPRQRQGECRVLLLGPAVGSQG*GQSGQC Trigger: GCACTGACCGCTCTGCCCGCAGCCCTGGCTGCCAAC...TGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGGAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | TCCCCAGGTAGGAGGTGGGAGAGATGGATCGCTATGAACCCTGGGACTGTGGCTTGCAGAACGCGCGTGTaGGTGCAGTTGCGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPGRRWERWIAMNPGTVACRTRV*VQLRQL Trigger: CAGCTGCCGCAACTGCACGCACACGCGCGTTCTGCA...AGCCACAGTCCCAGGGTTCATAGCGATCCATCTCTCCCACCTCCTACCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | ACATCAGGACCAGCGAGTGTGTCTGAGAACTGGAAGAGAGCGTTCCCGTTCCCGTCAGTCGCCGCTGCTTaGGGCTCAGCAGCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TSGPASVSENWKRAFPFPSVAAA*GSAAAD Trigger: GTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGA...CGGGAACGGGAACGCTCTCTTCCAGTTCTCAGACACACTCGCTGGTCCTGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | CCGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTGGGTCCAGCAACCTCCATCGGCCACTACTGTTaGCAGCCAGGGCTGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PRQRQGECRVLLLGPATSIGHYC*QPGLRA Trigger: TGCCCGCAGCCCTGGCTGCCAACAGTAGTGGCCGAT...GGAGGTTGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | GGTGGGGGCGAGGAGCCACTAATAGCTACAGTGGAAGGAAATACTGATCCGGTGGCGAGGCGCGGTTGCTaGCTCGGTTGCCGTAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GGGEEPLIATVEGNTDPVARRGC*LGCRKG Trigger: TCCTTTACGGCAACCGAGGCAGCAACCGCGCCTCGC...CACCGGATCAGTATTTCCTTCCACTGTAGCTATTAGTGGCTCCTCGCCCCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTCCGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTGGGTCCAGCACCTCCACTCACGCTGTaGAGGATCCCCGGGTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: MAPRQRQGECRVLLLGPAPPLTL*RIPGFC Trigger: ACAGAACCCGGGGATCCTGCACAGCGTGAGTGGAGG...TGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGGAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | CTCCTTTCCCACTTAGCTTTCCGTGCCCTTTCAACTCGGAAACTCTTCAGCTACCCACAGCGCGCAGCGTaGGCAGCCGCATCCAACACG | + |
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Preference number: 4 (lower is better) Translates to: LLSHLAFRALSTRKLFSYPQRAA*AAASNT Trigger: CGTGTTGGATGCGGCTGCCCACGCTGCGCGCTGTGG...GTAGCTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAAGTGGGAAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | AAGGAGAATGTAGGGTTTTGCTGCTGGGTCCAGCAACCTCCTTTCCCACTTAGCTTGCGGCTCAGCAGCTaGAGACTGGGCTCGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: KENVGFCCWVQQPPFPLSLRLSS*RLGSST Trigger: GGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAA...GCTAAGTGGGAAAGGAGGTTGCTGGACCCAGCAGCAAAACCCTACATTCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | ACATCAGGACCAGCGAGTGTGTCTGAGAACTGGAAGAGAGCGTTCCCGTTCCCGGGCGGCCACTGTACGTaGAGAAGTTGGGCGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSGPASVSENWKRAFPFPGGHCT*RSWAIS Trigger: AGAAATCGCCCAACTTCTGCACGTACAGTGGCCGCC...CGGGAACGGGAACGCTCTCTTCCAGTTCTCAGACACACTCGCTGGTCCTGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | ATAATACCCAAAGAGGTCACAGCGCAAAATACATCAGGAACCGCAACACCTTCACGCTCCGTGACGCGCTaGGTGCGCGTGCGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: IIPKEVTAQNTSGTATPSRSVTR*VRVRWP Trigger: AGGCCACCGCACGCGCACGCAGCGCGTCACGGAGCG...TGAAGGTGTTGCGGTTCCTGATGTATTTTGCGCTGTGACCTCTTTGGGTATTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | GGAGCAGTGAGGTGGGGTGAGGGTGGTCTCTGCAACCCAGGCTGGAACCCAGCATGTACGTGCAGAAGTTaGGCGATTTCTCGAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: GAVRWGEGGLCNPGWNPACTCRS*AISRSR Trigger: TCTACTTCGAGAAATCGCCCAACTTCTGCACGTACA...TGCTGGGTTCCAGCCTGGGTTGCAGAGACCACCCTCACCCCACCTCACTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCAAACATCAGGACCAGCGAGTGTGTCTGAGAACTGGAAGAGAGCGTTCCCCCGGCGGAGGTGATTaGGAAGATGAACGCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VGKHQDQRVCLRTGRERSPGGGD*EDERCF Trigger: GAAACAGCGTTCATCTTCGCAATCACCTCCGCCGGG...GGAACGCTCTCTTCCAGTTCTCAGACACACTCGCTGGTCCTGATGTTTGCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCAAACATCAGGACCAGCGAGTGTGTCTGAGAACTGGAAGAGAGCGTTCCCACGGTCGTTCGCCCTaGCTCGTTGTTGTGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VGKHQDQRVCLRTGRERSHGRSP*LVVVKV Trigger: AACCTTCACAACAACGAGGCAGGGCGAACGACCGTG...GGAACGCTCTCTTCCAGTTCTCAGACACACTCGCTGGTCCTGATGTTTGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | CAACCTCCTTTCCCACTTAGCTTTCCGTGCCCTTTCAACTCGGAAACTCTTCAGAACACGTGCGCACCGTaGAGGAGCCGGACATCCCGT | + |
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Preference number: 4 (lower is better) Translates to: QPPFPLSFPCPFNSETLQNTCAP*RSRTSR Trigger: ACGGGATGTCCGGCTCCTGCACGGTGCGCACGTGTT...CTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAAGTGGGAAAGGAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | ACATCAGGACCAGCGAGTGTGTCTGAGAACTGGAAGAGAGCGTTCCCGTTCCCGCCAGCTGCAGACTCTTaGAATCCGTCAACAGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: TSGPASVSENWKRAFPFPPAADS*NPSTGS Trigger: CGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGG...CGGGAACGGGAACGCTCTCTTCCAGTTCTCAGACACACTCGCTGGTCCTGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR TCA 90 bp | ATTCCTCAGAGGAAGATACTACATTGGTGGGGGCGAGGAGCCACTAATAGCTACCTCGGCAGCCTCGGTTaGCGATCTTGCCGAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: IPQRKILHWWGRGATNSYLGSLG*RSCRRG Trigger: ACCTCTTCGGCAAGATCGTCAACCGAGGCTGCCGAG...GTAGCTATTAGTGGCTCCTCGCCCCCACCAATGTAGTATCTTCCTCTGAGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR TCA 90 bp | CTGGAACCCAGCACAATAAATAGTTTTATTTACATAACCGAACGCGTGGCTCTGAGTTGCAGCGCTCCGTaGCGCGCTGCGTGCGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: LEPSTINSFIYITERVALSCSAP*RAACAC Trigger: GCACGCGCACGCAGCGCGTCACGGAGCGCTGCAACT...CAGAGCCACGCGTTCGGTTATGTAAATAAAACTATTTATTGTGCTGGGTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCAAACATCAGGACCAGCGAGTGTGTCTGAGAACTGGAAGAGAGCGTTCCACATCCCGTGGCATTTaGACTCTTGGCGCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VGKHQDQRVCLRTGRERSTSRGI*TLGASQ Trigger: CTGAGATGCGCCAAGAGTGCAAATGCCACGGGATGT...GGAACGCTCTCTTCCAGTTCTCAGACACACTCGCTGGTCCTGATGTTTGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | TACTACATTGGTGGGGGCGAGGAGCCACTAATAGCTACAGTGGAAGGAAATACTTCTCGCACAGCGCTCTaGAGCCCTCCACTCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: YYIGGGEEPLIATVEGNTSRTAL*SPPLTL Trigger: CAGCGTGAGTGGAGGGCTCCAGAGCGCTGTGCGAGA...AGTATTTCCTTCCACTGTAGCTATTAGTGGCTCCTCGCCCCCACCAATGTAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTTCCCACTTAGCTTTCCGTGCCCTTTCAACTCGGAAACTCTTCAGCTACGGCTCGAGCACCAGCTaGAGACTCTTGGAATCCGTC | + |
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Preference number: 4 (lower is better) Translates to: LLSHLAFRALSTRKLFSYGSSTS*RLLESV Trigger: GACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCC...GTAGCTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAAGTGGGAAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR TCA 90 bp | CAACCTCCTTTCCCACTTAGCTTTCCGTGCCCTTTCAACTCGGAAACTCTTCAGTGTTGTGAAGGTTCATaGGGAAGCGTAGGTCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: QPPFPLSFPCPFNSETLQCCEGS*GSVGPA Trigger: GGCGGGACCTACGCTTCCTCATGAACCTTCACAACA...CTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAAGTGGGAAAGGAGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR GCA 90 bp | ATAAATAGTTTTATTTACATAACCGAACGCGTGGCTCTGCGGCCACATTTCGGTCCCGCGAGGCGCGGTTaGTGCCTCGGTTGCCGTAAA | + |
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Preference number: 4 (lower is better) Translates to: INSFIYITERVALRPHFGPARRG*CLGCRK Trigger: TTTACGGCAACCGAGGCAGCAACCGCGCCTCGCGGG...ACCGAAATGTGGCCGCAGAGCCACGCGTTCGGTTATGTAAATAAAACTATTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CCA 90 bp | ATAAATAGTTTTATTTACATAACCGAACGCGTGGCTCTGCGGCCACATTTCGGTATCTTGCCGAAGAGGTaGGGCCCCGGAGCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: INSFIYITERVALRPHFGILPKR*GPGAVG Trigger: CCCCACTGCTCCGGGGCCCCACCTCTTCGGCAAGAT...ACCGAAATGTGGCCGCAGAGCCACGCGTTCGGTTATGTAAATAAAACTATTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | CCAGGCGCAGCAGCTCCGCCCGCGAGGCGCGGTTGCTGCCTCGGTTaGCGTAAAGGACGCGGGAGGCGCCGTCGAAGCGGTCGCGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PGAAAPPARRGCCLG*RKGRGRRRRSGRAA Trigger: TGCTGCGCGACCGCTTCGACGGCGCCTCCCGCGTCCTTTACGGCAACCGAGGCAGCAACCGCGCCTCGCGGGCGGAGCTGCTGCGCCTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 90 bp | CGCCGTCGAAGCGGTCGCGCAGCACGTCGCCCACAGCGCGCAGCGTaGGCAGCCGCATCCAACACGTGCGCACCGTGCAGGAGCCGGACA | + |
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Preference number: 5 (lower is better) Translates to: RRRSGRAARRPQRAA*AAASNTCAPCRSRT Trigger: TGTCCGGCTCCTGCACGGTGCGCACGTGTTGGATGCGGCTGCCCACGCTGCGCGCTGTGGGCGACGTGCTGCGCGACCGCTTCGACGGCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | AGTGCCAGTCGGGGCCCCCAGGGCCGCGCCGCCGGTAGTCGCAGGTaGAGGACTCGATGGAGCCTTCGGAGCAGGAGCGCGCCACGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SASRGPQGRAAGSRR*RTRWSLRSRSAPRN Trigger: ATTCCGTGGCGCGCTCCTGCTCCGAAGGCTCCATCGAGTCCTGCACCTGCGACTACCGGCGGCGCGGCCCTGGGGGCCCCGACTGGCACT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | CGCTGTGCAGGATCCCCGGGTTCTGTCGGATCAGTCGCCGCTGCTTaGGGCTCAGCAGCTGCAGACTGGGCTCGAGCACCAGCTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: RCAGSPGSVGSVAAA*GSAAADWARAPAAD Trigger: GTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGATCCGACAGAACCCGGGGATCCTGCACAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | CTCACGCTGTGCAGGATCCCCGGGTTCTGTCGGATCAGTCGCCGCTaGTTGCGGCTCAGCAGCTGCAGACTGGGCTCGAGCACCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LTLCRIPGFCRISRR*LRLSSCRLGSSTSC Trigger: GCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGATCCGACAGAACCCGGGGATCCTGCACAGCGTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | AGCCGTCCAGCGCGGGAGACGAGCTGTTGCAAGCTCGTCCAGCTGTaGCAGCTGTGCCCAGGCGGCCACTGTACGTGCAGAAGTTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: SRPARETSCCKLVQL*QLCPGGHCTCRSWA Trigger: CGCCCAACTTCTGCACGTACAGTGGCCGCCTGGGCACAGCTGGCACAGCTGGACGAGCTTGCAACAGCTCGTCTCCCGCGCTGGACGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | CCCGGGTTCTGTCGGATCAGTCGCCGCTGCTTGCGGCTCAGCAGCTaGAGACTGGGCTCGAGCACCAGCTGCAGACTCTTGGAATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: PGFCRISRRCLRLSS*RLGSSTSCRLLESV Trigger: GACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGATCCGACAGAACCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | CATTTGCACTCTCGCACAGCGCTCTGGAGCCCTCCACTCACGCTGTaGAGGATCCCCGGGTTCTGTCGGATCAGTCGCCGCTGCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: HLHSRTALWSPPLTL*RIPGFCRISRRCLR Trigger: CCGCAAGCAGCGGCGACTGATCCGACAGAACCCGGGGATCCTGCACAGCGTGAGTGGAGGGCTCCAGAGCGCTGTGCGAGAGTGCAAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | GCGCGGGAGACGAGCTGTTGCAAGCTCGTCCAGCTGTGCCAGCTGTaGCCAGGCGGCCACTGTACGTGCAGAAGTTGGGCGATTTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: ARETSCCKLVQLCQL*PGGHCTCRSWAISR Trigger: TCGAGAAATCGCCCAACTTCTGCACGTACAGTGGCCGCCTGGGCACAGCTGGCACAGCTGGACGAGCTTGCAACAGCTCGTCTCCCGCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 90 bp | TGGAGGAGGCTATGTTCACGATGCCCCACCATCGGCCACTACTGTTaGCAGCCAGGGCTGCGGGCAGAGCGGTCAGTGCCAGTAGCAACG | + |
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Preference number: 5 (lower is better) Translates to: WRRLCSRCPTIGHYC*QPGLRAERSVPVAT Trigger: CGTTGCTACTGGCACTGACCGCTCTGCCCGCAGCCCTGGCTGCCAACAGTAGTGGCCGATGGTGGGGCATCGTGAACATAGCCTCCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 90 bp | CAGCGGCGGTTTCGGAATTGCCATTTGCACTCTCGCACAGCGCTCTaGAGCCCTCCACTCACGCTGTGCAGGATCCCCGGGTTCTGTCGG | + |
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Preference number: 5 (lower is better) Translates to: QRRFRNCHLHSRTAL*SPPLTLCRIPGFCR Trigger: CCGACAGAACCCGGGGATCCTGCACAGCGTGAGTGGAGGGCTCCAGAGCGCTGTGCGAGAGTGCAAATGGCAATTCCGAAACCGCCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CAA 90 bp | TCCCCAGGTAGGAGGTGGGAGAGATGGATCGCTATGAACCCTGGGACTGTGGCTCCTCGGTTGACGATCTaGCCGAAGAGGTGGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SPGRRWERWIAMNPGTVAPRLTI*PKRWGP Trigger: GGGGCCCCACCTCTTCGGCAAGATCGTCAACCGAGG...AGCCACAGTCCCAGGGTTCATAGCGATCCATCTCTCCCACCTCCTACCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 90 bp | CGCTGCTTGCGGCTCAGCAGCTGCAGACTGGGCTCGAGCACCAGCTaGAGACTCTTGGAATCCGTCAACAGGTTCGTGGAGGAGGCTATG | + |
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Preference number: 5 (lower is better) Translates to: RCLRLSSCRLGSSTS*RLLESVNRFVEEAM Trigger: CATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 90 bp | TCTGTCGGATCAGTCGCCGCTGCTTGCGGCTCAGCAGCTGCAGACTaGGCTCGAGCACCAGCTGCAGACTCTTGGAATCCGTCAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: SVGSVAAACGSAAAD*ARAPAADSWNPSTG Trigger: ACCTGTTGACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGATCCGACAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 90 bp | GGCTCAGCAGCTGCAGACTGGGCTCGAGCACCAGCTGCAGACTCTTaGAATCCGTCAACAGGTTCGTGGAGGAGGCTATGTTCACGATGC | + |
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Preference number: 5 (lower is better) Translates to: GSAAADWARAPAADS*NPSTGSWRRLCSRC Trigger: GCATCGTGAACATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CAA 90 bp | ATGGCTCCGAGGCAGAGACAAGGAGAATGTAGGGTTTTGCTGCTGGGTCCAGCAGCGGGAGACGAGCTGTaGCAAGCTCGTCCAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: MAPRQRQGECRVLLLGPAAGDEL*QARPAV Trigger: CACAGCTGGACGAGCTTGCAACAGCTCGTCTCCCGC...TGCTGGACCCAGCAGCAAAACCCTACATTCTCCTTGTCTCTGCCTCGGAGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 90 bp | GCTCGAGCACCAGCTGCAGACTCTTGGAATCCGTCAACAGGTTCGTaGAGGAGGCTATGTTCACGATGCCCCACCATCGGCCACTACTGT | + |
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Preference number: 5 (lower is better) Translates to: ARAPAADSWNPSTGS*RRLCSRCPTIGHYC Trigger: ACAGTAGTGGCCGATGGTGGGGCATCGTGAACATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CAA 90 bp | CTCCTTTCCCACTTAGCTTTCCGTGCCCTTTCAACTCGGAAACTCTTCAGCTACTCTCGGCAGCCTCGGTaGACGATCTTGCCGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LLSHLAFRALSTRKLFSYSRQPR*TILPKR Trigger: CCTCTTCGGCAAGATCGTCAACCGAGGCTGCCGAGA...GTAGCTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAAGTGGGAAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CAA 90 bp | ATAATACCCAAAGAGGTCACAGCGCAAAATACATCAGGAACCGCAACACCTTCACGCGTGTGCGTGCAGTaGCGGCAGCTGACGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: IIPKEVTAQNTSGTATPSRVCVQ*RQLTWQ Trigger: CTGCCACGTCAGCTGCCGCAACTGCACGCACACGCG...TGAAGGTGTTGCGGTTCCTGATGTATTTTGCGCTGTGACCTCTTTGGGTATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CAA 90 bp | CTGGAACCCAGCACAATAAATAGTTTTATTTACATAACCGAACGCGTGGCTCTGCATCGGCCACTACTGTaGGCAGCCAGGGCTGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: LEPSTINSFIYITERVALHRPLL*AARAAG Trigger: GCCCGCAGCCCTGGCTGCCAACAGTAGTGGCCGATG...CAGAGCCACGCGTTCGGTTATGTAAATAAAACTATTTATTGTGCTGGGTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS-3UTR CAA 90 bp | TATTTTATTCCTCAGAGGAAGATACTACATTGGTGGGGGCGAGGAGCCACTAATGACATCCCGTGGCATTaGCACTCTTGGCGCATCTCA | + |
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Preference number: 5 (lower is better) Translates to: YFIPQRKILHWWGRGATNDIPWH*HSWRIS Trigger: TGAGATGCGCCAAGAGTGCAAATGCCACGGGATGTC...ATTAGTGGCTCCTCGCCCCCACCAATGTAGTATCTTCCTCTGAGGAATAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | CGGGGCCCCCAGGGCCGCGCCGCCGGTAGTCGCAGGTaGAGGACTCGATGGAGCCTTCGGAGCAGGAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: RGPQGRAAGSRR*RTRWSLRSRSA Trigger: CGCGCTCCTGCTCCGAAGGCTCCATCGAGTCCTGCACCTGCGACTACCGGCGGCGCGGCCCTGGGGGCCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | CCAGGCGCAGCAGCTCCGCCCGCGAGGCGCGGTTGCTaGCTCGGTTGCCGTAAAGGACGCGGGAGGCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: PGAAAPPARRGC*LGCRKGRGRRR Trigger: ACGGCGCCTCCCGCGTCCTTTACGGCAACCGAGGCAGCAACCGCGCCTCGCGGGCGGAGCTGCTGCGCCTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | GCAGCTCCGCCCGCGAGGCGCGGTTGCTGCCTCGGTTaGCGTAAAGGACGCGGGAGGCGCCGTCGAAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: AAPPARRGCCLG*RKGRGRRRRSG Trigger: ACCGCTTCGACGGCGCCTCCCGCGTCCTTTACGGCAACCGAGGCAGCAACCGCGCCTCGCGGGCGGAGCTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 72 bp | AGCGGTCGCGCAGCACGTCGCCCACAGCGCGCAGCGTaGGCAGCCGCATCCAACACGTGCGCACCGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGRAARRPQRAA*AAASNTCAPCR Trigger: CCTGCACGGTGCGCACGTGTTGGATGCGGCTGCCCACGCTGCGCGCTGTGGGCGACGTGCTGCGCGACCGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 72 bp | GGCCGCGCCGCCGGTAGTCGCAGGTGCAGGACTCGATaGAGCCTTCGGAGCAGGAGCGCGCCACGGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: GRAAGSRRCRTR*SLRSRSAPRNV Trigger: CACATTCCGTGGCGCGCTCCTGCTCCGAAGGCTCCATCGAGTCCTGCACCTGCGACTACCGGCGGCGCGGCC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 72 bp | TCTCGGCAGCCTCGGTTGACGATCTTGCCGAAGAGGTaGGGCCCCGGAGCAGTGGGGCAGTTCCAGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SRQPRLTILPKR*GPGAVGQFQRR Trigger: CCGCCGCTGGAACTGCCCCACTGCTCCGGGGCCCCACCTCTTCGGCAAGATCGTCAACCGAGGCTGCCGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | TCTCGCACAGCGCTCTGGAGCCCTCCACTCACGCTGTaGAGGATCCCCGGGTTCTGTCGGATCAGTCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SRTALWSPPLTL*RIPGFCRISRR Trigger: GCGGCGACTGATCCGACAGAACCCGGGGATCCTGCACAGCGTGAGTGGAGGGCTCCAGAGCGCTGTGCGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | GCGCGGGAGACGAGCTGTTGCAAGCTCGTCCAGCTGTaGCAGCTGTGCCCAGGCGGCCACTGTACGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ARETSCCKLVQL*QLCPGGHCTCR Trigger: TCTGCACGTACAGTGGCCGCCTGGGCACAGCTGGCACAGCTGGACGAGCTTGCAACAGCTCGTCTCCCGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CAA 90 bp | ACGCTGTGCAGGATCCCCGGGTTCTGTCGGATCAGTCGCCGCTGCTaGCGGCTCAGCAGCTGCAGACTGGGCTCGAGCACCAGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TLCRIPGFCRISRRC*RLSSCRLGSSTSCR Trigger: TCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGATCCGACAGAACCCGGGGATCCTGCACAGCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CAA 72 bp | GCTATGTTCACGATGCCCCACCATCGGCCACTACTGTaGGCAGCCAGGGCTGCGGGCAGAGCGGTCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: AMFTMPHHRPLL*AARAAGRAVSA Trigger: GGCACTGACCGCTCTGCCCGCAGCCCTGGCTGCCAACAGTAGTGGCCGATGGTGGGGCATCGTGAACATAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | TGTCGGATCAGTCGCCGCTGCTTGCGGCTCAGCAGCTaGAGACTGGGCTCGAGCACCAGCTGCAGACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CRISRRCLRLSS*RLGSSTSCRLL Trigger: CAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGATCCGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | ACGAGCTGTTGCAAGCTCGTCCAGCTGTGCCAGCTGTaGCCAGGCGGCCACTGTACGTGCAGAAGTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: TSCCKLVQLCQL*PGGHCTCRSWA Trigger: CGCCCAACTTCTGCACGTACAGTGGCCGCCTGGGCACAGCTGGCACAGCTGGACGAGCTTGCAACAGCTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 72 bp | TCAGTCGCCGCTGCTTGCGGCTCAGCAGCTGCAGACTaGGCTCGAGCACCAGCTGCAGACTCTTGGAATCCG | + |
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Preference number: 6 (lower is better) Translates to: SVAAACGSAAAD*ARAPAADSWNP Trigger: CGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CAA 90 bp | GTGGAGGAGGCTATGTTCACGATGCCCCACCATCGGCCACTACTGTaGGCAGCCAGGGCTGCGGGCAGAGCGGTCAGTGCCAGTAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: VEEAMFTMPHHRPLL*AARAAGRAVSASSN Trigger: GTTGCTACTGGCACTGACCGCTCTGCCCGCAGCCCTGGCTGCCAACAGTAGTGGCCGATGGTGGGGCATCGTGAACATAGCCTCCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS GCA 72 bp | GCGCGCCACGGAATGTGTGACCCCGGCGGAGGTGATTaGGAAGATGAACGCTGTTTCTCGGCAGCCTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ARHGMCDPGGGD*EDERCFSAASV Trigger: AACCGAGGCTGCCGAGAAACAGCGTTCATCTTCGCAATCACCTCCGCCGGGGTCACACATTCCGTGGCGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 72 bp | TTTCGGAATTGCCATTTGCACTCTCGCACAGCGCTCTaGAGCCCTCCACTCACGCTGTGCAGGATCCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRNCHLHSRTAL*SPPLTLCRIPG Trigger: CCCGGGGATCCTGCACAGCGTGAGTGGAGGGCTCCAGAGCGCTGTGCGAGAGTGCAAATGGCAATTCCGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CAA 72 bp | ATTGCGAAGATGAACGCTGTTTCTCGGCAGCCTCGGTaGACGATCTTGCCGAAGAGGTGGGGCCCCGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IAKMNAVSRQPR*TILPKRWGPGA Trigger: TGCTCCGGGGCCCCACCTCTTCGGCAAGATCGTCAACCGAGGCTGCCGAGAAACAGCGTTCATCTTCGCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CAA 90 bp | CGGCTCAGCAGCTGCAGACTGGGCTCGAGCACCAGCTGCAGACTCTaGGAATCCGTCAACAGGTTCGTGGAGGAGGCTATGTTCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: RLSSCRLGSSTSCRL*ESVNRFVEEAMFTM Trigger: CATCGTGAACATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCTGCTGAGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 72 bp | CCAGCTGCAGACTCTTGGAATCCGTCAACAGGTTCGTaGAGGAGGCTATGTTCACGATGCCCCACCATCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PAADSWNPSTGS*RRLCSRCPTIG Trigger: GCCGATGGTGGGGCATCGTGAACATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CCA 72 bp | GCTGCAGACTGGGCTCGAGCACCAGCTGCAGACTCTTaGAATCCGTCAACAGGTTCGTGGAGGAGGCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: AADWARAPAADS*NPSTGSWRRLC Trigger: ACATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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| CDS CAA 72 bp | AGCTGCAGACTGGGCTCGAGCACCAGCTGCAGACTCTaGGAATCCGTCAACAGGTTCGTGGAGGAGGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: SCRLGSSTSCRL*ESVNRFVEEAM Trigger: CATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGTCTGCAGCTGGTGCTCGAGCCCAGTCTGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023734.8 |
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