Pregenerated sensors for WLS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028173Ensembl transcript IDs: ENSMUST00000068952.10, ENSMUST00000198878.2, ENSMUST00000200191.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTACTCCAGGGGAAGAGGCTGGATAGAGAGACAATTCCAGCTCAGTaGCATACCATAGCCTCCTATTCCTGTGCTTCTTTACGGGTCAAC | + |
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Preference number: 1 (lower is better) Translates to: LLQGKRLDRETIPAQ*HTIASYSCASLRVN Trigger: GTTGACCCGTAAAGAAGCACAGGAATAGGAGGCTATGGTATGGCACTGAGCTGGAATTGTCTCTCTATCCAGCCTCTTCCCCTGGAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR GCA 90 bp | GCAGAAGGAGCCAACAGCAATTGGTCCAACTTGCTTCCAGTACCCTaGAATGTGATTCCGTTCATGTTGATCCATCATGTGCTCGCCACA | + |
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Preference number: 1 (lower is better) Translates to: AEGANSNWSNLLPVP*NVIPFMLIHHVLAT Trigger: TGTGGCGAGCACATGATGGATCAACATGAACGGAATCACATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | TACGGACATCCACACATTTTATTGCCGTGTAGGGTACTGCTGTTGTaGGTGCTGGAGTTGAGACAGGGTCCCACTAAGTTGTTGAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: YGHPHILLPCRVLLL*VLELRQGPTKLLKL Trigger: CAGCTTCAACAACTTAGTGGGACCCTGTCTCAACTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | GAAGATCAGACCCTCATAGTGCAGCCTCCGGACTTTGCTCATGGCTaGGAGGCTAGACTGCTTCCCACTGATGTTTCTAAATACCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: EDQTLIVQPPDFAHG*EARLLPTDVSKYLK Trigger: TTTCAGGTATTTAGAAACATCAGTGGGAAGCAGTCTAGCCTCCCAGCCATGAGCAAAGTCCGGAGGCTGCACTATGAGGGTCTGATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR TCA 90 bp | AGCTATTTCTGCCAGCACCTGGGTACTCCAAGATCCAAGCAGATTTaGATCTGTATGCCTGAGAACTGTTGGGACAGGAAGGGGTGCATA | + |
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Preference number: 1 (lower is better) Translates to: SYFCQHLGTPRSKQI*ICMPENCWDRKGCI Trigger: TATGCACCCCTTCCTGTCCCAACAGTTCTCAGGCATACAGATTCAAATCTGCTTGGATCTTGGAGTACCCAGGTGCTGGCAGAAATAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR GCA 90 bp | GCCAGCACCTGGGTACTCCAAGATCCAAGCAGATTTGAATCTGTATaGCTGAGAACTGTTGGGACAGGAAGGGGTGCATATTTACATTCA | + |
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Preference number: 1 (lower is better) Translates to: ASTWVLQDPSRFESV*LRTVGTGRGAYLHS Trigger: TGAATGTAAATATGCACCCCTTCCTGTCCCAACAGTTCTCAGGCATACAGATTCAAATCTGCTTGGATCTTGGAGTACCCAGGTGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR GCA 90 bp | AGAGACAATTCCAGCTCAGTGCCATACCATAGCCTCCTATTCCTGTaGTTCTTTACGGGTCAACTTGTAGATCTCAGTTGGTCCATCTAC | + |
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Preference number: 1 (lower is better) Translates to: RDNSSSVPYHSLLFL*FFTGQLVDLSWSIY Trigger: GTAGATGGACCAACTGAGATCTACAAGTTGACCCGTAAAGAAGCACAGGAATAGGAGGCTATGGTATGGCACTGAGCTGGAATTGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR TCA 90 bp | TGTGATTCCGTTCATGTTGATCCATCATGTGCTCGCCACAGAAGATaGTCCAGAAAGAAAGAAGCATTGCATAGAAGATGCCCTGTCGGA | + |
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Preference number: 1 (lower is better) Translates to: CDSVHVDPSCARHRR*SRKKEALHRRCPVG Trigger: TCCGACAGGGCATCTTCTATGCAATGCTTCTTTCTTTCTGGATCATCTTCTGTGGCGAGCACATGATGGATCAACATGAACGGAATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR GCA 90 bp | CAGGTCACCATTAGACTGGTCTTCCCCATAGTTCTTATGGGATGGTaGATACAAGAACATCAAAGCAAAGACATACAGGTTCCACATCCC | + |
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Preference number: 1 (lower is better) Translates to: QVTIRLVFPIVLMGW*IQEHQSKDIQVPHP Trigger: GGGATGTGGAACCTGTATGTCTTTGCTTTGATGTTCTTGTATGCACCATCCCATAAGAACTATGGGGAAGACCAGTCTAATGGTGACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | TATCCCTTCACCTCCAGAAATACTCAAGCTATTTCTGCCAGCACCTaGGTACTCCAAGATCCAAGCAGATTTGAATCTGTATGCCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: YPFTSRNTQAISAST*VLQDPSRFESVCLR Trigger: TCTCAGGCATACAGATTCAAATCTGCTTGGATCTTGGAGTACCCAGGTGCTGGCAGAAATAGCTTGAGTATTTCTGGAGGTGAAGGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR CCA 90 bp | TTCACACATGTCAAATATGAAGAGGCAGAAGGAGCCAACAGCAATTaGTCCAACTTGCTTCCAGTACCCTGCAATGTGATTCCGTTCATG | + |
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Preference number: 1 (lower is better) Translates to: FTHVKYEEAEGANSN*SNLLPVPCNVIPFM Trigger: CATGAACGGAATCACATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCTTCTGCCTCTTCATATTTGACATGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | ACCCAGGTCACCATTAGACTGGTCTTCCCCATAGTTCTTATGGGATaGTGCATACAAGAACATCAAAGCAAAGACATACAGGTTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: TQVTIRLVFPIVLMG*CIQEHQSKDIQVPH Trigger: ATGTGGAACCTGTATGTCTTTGCTTTGATGTTCTTGTATGCACCATCCCATAAGAACTATGGGGAAGACCAGTCTAATGGTGACCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | CTCCTATTCCTGTGCTTCTTTACGGGTCAACTTGTAGATCTCAGTTaGTCCATCTACATGGGTTATAGTGGTAGTAAGCTGCAGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LLFLCFFTGQLVDLS*SIYMGYSGSKLQFF Trigger: GAAGAACTGCAGCTTACTACCACTATAACCCATGTAGATGGACCAACTGAGATCTACAAGTTGACCCGTAAAGAAGCACAGGAATAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR GCA 90 bp | GTGTACAGAAAACACAATGTCATTTGCTTCAATTTCCCTTGGAATTaGTTCCTCGATGTCACGGATCTTGTCACACTTGTTAGGTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: VYRKHNVICFNFPWN*FLDVTDLVTLVRSP Trigger: TGGGGACCTAACAAGTGTGACAAGATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAATGACATTGTGTTTTCTGTACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | TTCAGCTTGAAAGCAATGTCTAGCTGCAAGATAAACAGCATAAACTaGAACCATGGACTCATCTCCATAGAAGGGAGGGGAATGTGTACA | + |
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Preference number: 1 (lower is better) Translates to: FSLKAMSSCKINSIN*NHGLISIEGRGMCT Trigger: TGTACACATTCCCCTCCCTTCTATGGAGATGAGTCCATGGTTCCAGTTTATGCTGTTTATCTTGCAGCTAGACATTGCTTTCAAGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | GGGAATGTGTACAGAAAACACAATGTCATTTGCTTCAATTTCCCTTaGAATTGCTTCCTCGATGTCACGGATCTTGTCACACTTGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: GNVYRKHNVICFNFP*NCFLDVTDLVTLVR Trigger: CCTAACAAGTGTGACAAGATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAATGACATTGTGTTTTCTGTACACATTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR TCA 90 bp | ATAGTAGTGGCAGAAGTTTTGCAACAGCCACCATTGGAGGTCATCTaGCAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: IVVAEVLQQPPLEVI*QMSICCFKKLYLRS Trigger: GCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTGTCAGATGACCTCCAATGGTGGCTGTTGCAAAACTTCTGCCACTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
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| 3UTR CCA 90 bp | TCTTTATACTTAGGTGGCAGATCAGTAAGTGGATGTTGGGTACAATaGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: SLYLGGRSVSGCWVQ*ITYPSNIHQFRKRH Trigger: ATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTACCCAACATCCACTTACTGATCTGCCACCTAAGTATAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR TCA 90 bp | TTGAAGTTTATTTGCTCTAATAGAAACAGAAGCACAGGCTACACTTaGTTCTTTATACTTAGGTGGCAGATCAGTAAGTGGATGTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: LKFICSNRNRSTGYT*FFILRWQISKWMLG Trigger: ACCCAACATCCACTTACTGATCTGCCACCTAAGTATAAAGAATCAAGTGTAGCCTGTGCTTCTGTTTCTATTAGAGCAAATAAACTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR-3UTR CCA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTTCCAGGGGAAGAGGCTaGATAGAGAGACAATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QTIPRSIPLYVRVTNPPASRGRG*IERQFQ Trigger: CTGGAATTGTCTCTCTATCCAGCCTCTTCCCCTGGA...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
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| 3UTR CAA 90 bp | TCTTACGGACATCCACACATTTTATTGCCGTGTAGGGTACTGCTGTaGTGGGTGCTGGAGTTGAGACAGGGTCCCACTAAGTTGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SYGHPHILLPCRVLL*WVLELRQGPTKLLK Trigger: CTTCAACAACTTAGTGGGACCCTGTCTCAACTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CAA 90 bp | GCCATCTTGTTTTATGGTGGTTCTTACGGACATCCACACATTTTATaGCCGTGTAGGGTACTGCTGTTGTGGGTGCTGGAGTTGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: AILFYGGSYGHPHIL*PCRVLLLWVLELRQ Trigger: CTGTCTCAACTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGAACCACCATAAAACAAGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGCAGATACCTGCCACAATGATGAAAGCCATAGCCAGTTCTGTTCCAACAGCTCGCCACAGAAGATaGTCCAGAAAGAAAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: QRQIPATMMKAIASSVPTARHRR*SRKKEA Trigger: TGCTTCTTTCTTTCTGGATCATCTTCTGTGGCGAGC...TGTTGGAACAGAACTGGCTATGGCTTTCATCATTGTGGCAGGTATCTGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGTCCATCTACATGGGTTATAGTGGTAGTAAGCTGCAGTTCTTCCCCGCTCCATTGGAGGTCATCTaGCAAATGTCCATCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: SWSIYMGYSGSKLQFFPAPLEVI*QMSICC Trigger: ACAACAGATGGACATTTGTCAGATGACCTCCAATGG...AGCGGGGAAGAACTGCAGCTTACTACCACTATAACCCATGTAGATGGACCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTTGAACCTGAAGATCAGACCCTCATAGTGCAGCCTCCGGACTTTGCTCATGAAAGAAAGAAGCATTaGATAGAAGATGCCCTGTCG | + |
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Preference number: 2 (lower is better) Translates to: ELEPEDQTLIVQPPDFAHERKKH*IEDALS Trigger: CGACAGGGCATCTTCTATGCAATGCTTCTTTCTTTC...ATGAGCAAAGTCCGGAGGCTGCACTATGAGGGTCTGATCTTCAGGTTCAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR CAA 90 bp | GTCAAATATGAAGAGGCAGAAGGAGCCAACAGCAATTGGTCCAACTaGCTTCCAGTACCCTGCAATGTGATTCCGTTCATGTTGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: VKYEEAEGANSNWSN*LPVPCNVIPFMLIH Trigger: ATGGATCAACATGAACGGAATCACATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCTTCTGCCTCTTCATATTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGTCCATCTACATGGGTTATAGTGGTAGTAAGCTGCAGTTCTTCCCCGCTAATTTCCCTTGGAATTaGTTCCTCGATGTCACGGAT | + |
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Preference number: 2 (lower is better) Translates to: SWSIYMGYSGSKLQFFPANFPWN*FLDVTD Trigger: ATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATT...AGCGGGGAAGAACTGCAGCTTACTACCACTATAACCCATGTAGATGGACCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCAGATACCTGCCACAATGATGAAAGCCATAGCCAGTTCTGTTCCAACATGCTTCAATTTCCCTTaGAATTGCTTCCTCGATGTC | + |
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Preference number: 2 (lower is better) Translates to: QRQIPATMMKAIASSVPTCFNFP*NCFLDV Trigger: GACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCA...TGTTGGAACAGAACTGGCTATGGCTTTCATCATTGTGGCAGGTATCTGCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAATAGAGGCAGAGGCAGATACCTGCCACAATGATGAAAGCCATAGCCAGACATTTGAGTTTACGTaGTACTCTTTCATGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: QEIEAEADTCHNDESHSQTFEFT*YSFMGH Trigger: ATGGCCCATGAAAGAGTACCACGTAAACTCAAATGT...CTGGCTATGGCTTTCATCATTGTGGCAGGTATCTGCCTCTGCCTCTATTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAAATCCAATAGAAAACCATTCCACAGGGATATTGATAAAGGTCATGGAATGTGGGTGCTGGAGTTaGGACAGGGTCCCACTAAGT | + |
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Preference number: 2 (lower is better) Translates to: QSNPIENHSTGILIKVMECGCWS*DRVPLS Trigger: ACTTAGTGGGACCCTGTCTCAACTCCAGCACCCACA...TTCCATGACCTTTATCAATATCCCTGTGGAATGGTTTTCTATTGGATTTGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTCATGGGCCATTTCAGTCCATTCAGAAAACATATCATCACGGTAACCCACAATATAGCCCCTATTaGCCCAAACCATCCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LFHGPFQSIQKTYHHGNPQYSPY*PKPSQG Trigger: TCCTTGGGATGGTTTGGGCCAATAGGGGCTATATTG...TGGGTTACCGTGATGATATGTTTTCTGAATGGACTGAAATGGCCCATGAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTAATTTCTGCCAGCACCTaGGTACTCCAAGATCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLISAST*VLQDPS Trigger: GCTTGGATCTTGGAGTACCCAGGTGCTGGCAGAAAT...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR-3UTR CCA 90 bp | GCTAGACTGCTTCCCACTGATGTTTCTAAATACCTGAAATACCATGAAGCACAGGGAGCCAACAGCAATTaGTCCAACTTGCTTCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: ARLLPTDVSKYLKYHEAQGANSN*SNLLPV Trigger: TACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCC...CTGTGCTTCATGGTATTTCAGGTATTTAGAAACATCAGTGGGAAGCAGTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR TCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTAGATTCCTCATGTATGTaGGCATTCCTTGCTGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLDSSCM*AFLAGL Trigger: TAGGCCAGCAAGGAATGCTCACATACATGAGGAATC...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR-3UTR TCA 90 bp | CATGTCAAATATGAAGAGGCAGAAGGAGCCAACAGCAATTGGTCCAACTTGCTTATACTTATGAGCCACTaGCCCAATTTCCATGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HVKYEEAEGANSNWSNLLILMSH*PNFHER Trigger: CCTTTCATGGAAATTGGGTCAGTGGCTCATAAGTAT...AAGCAAGTTGGACCAATTGCTGTTGGCTCCTTCTGCCTCTTCATATTTGACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR GCA 90 bp | CATACAAGAACATCAAAGCAAAGACATACAGGTTCCACATCCCATAGATTCCAGGCAATTGGTCCAACTTaGTTCCAGTACCCTGCAATG | + |
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Preference number: 2 (lower is better) Translates to: HTRTSKQRHTGSTSHRFQAIGPT*FQYPAM Trigger: CATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGC...CTGGAATCTATGGGATGTGGAACCTGTATGTCTTTGCTTTGATGTTCTTGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGACATCACAATTATAATAACGACCTTCGTGCTCTGGGGTCTTGGGGGATGTATAAACAGCATAAACTaGAACCATGGACTCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: KDITIIITTFVLWGLGGCINSIN*NHGLIS Trigger: GGAGATGAGTCCATGGTTCCAGTTTATGCTGTTTAT...ACATCCCCCAAGACCCCAGAGCACGAAGGTCGTTATTATAATTGTGATGTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGTCCATCTACATGGGTTATAGTGGTAGTAAGCTGCAGTTCTTCCCCGCTGCATTTTCTCTGATTTaGTTGTTCAGCTTGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SWSIYMGYSGSKLQFFPAAFSLI*LFSLKA Trigger: TGCTTTCAAGCTGAACAACCAAATCAGAGAAAATGC...AGCGGGGAAGAACTGCAGCTTACTACCACTATAACCCATGTAGATGGACCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR TCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTACCATTGGAGGTCATCTaGCAAATGTCCATCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLPLEVI*QMSICC Trigger: ACAACAGATGGACATTTGTCAGATGACCTCCAATGG...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR-3UTR CCA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCATCCAGGGGAAGAGGCTaGATAGAGAGACAATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QMSICCFKKLYLRSTRYPSRGRG*IERQFQ Trigger: CTGGAATTGTCTCTCTATCCAGCCTCTTCCCCTGGA...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | CATAAAGACAAGATCCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTCAATATAGCCCCTATTaGCCCAAACCATCCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: HKDKIQPLSVFSVTVYHGQYSPY*PKPSQG Trigger: TCCTTGGGATGGTTTGGGCCAATAGGGGCTATATTG...ACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGGATCTTGTCTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR-3UTR CCA 90 bp | CATACAAGAACATCAAAGCAAAGACATACAGGTTCCACATCCCATAGATTCCAGAGCCATCTTGTTTTATaGTGGTTCTTACGGACATCC | + |
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Preference number: 2 (lower is better) Translates to: HTRTSKQRHTGSTSHRFQSHLVL*WFLRTS Trigger: GGATGTCCGTAAGAACCACCATAAAACAAGATGGCT...CTGGAATCTATGGGATGTGGAACCTGTATGTCTTTGCTTTGATGTTCTTGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTCCATGAAAGGAAGGACATCACAATTATAATAACGACCTTCGTGCTCTGGCGTGGTACTCTTTCATaGGCCATTTCAGTCCATTCA | + |
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Preference number: 2 (lower is better) Translates to: NFHERKDITIIITTFVLWRGTLS*AISVHS Trigger: TGAATGGACTGAAATGGCCCATGAAAGAGTACCACG...CCAGAGCACGAAGGTCGTTATTATAATTGTGATGTCCTTCCTTTCATGGAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGATGATCCAGAAAGAAAGAAGCATTGCATAGAAGATGCCCTGTCGGATAGAGTAAAAAGACTATaGCATCAGCAAATGTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: TEDDPERKKHCIEDALSDRVKRL*HQQMLD Trigger: GTCCAACATTTGCTGATGTCATAGTCTTTTTACTCT...ATCCGACAGGGCATCTTCTATGCAATGCTTCTTTCTTTCTGGATCATCTTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| 3UTR-3UTR TCA 90 bp | CATAAAGACAAGATCCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTTGAATCTGTATGCCTaGGAACTGTTGGGACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HKDKIQPLSVFSVTVYHGLNLYA*ELLGQE Trigger: TTCCTGTCCCAACAGTTCTCAGGCATACAGATTCAA...ACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGGATCTTGTCTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR-3UTR TCA 90 bp | GTACAATGGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCATAAAAGATCCAAGCAGATTTaGATCTGTATGCCTGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VQWITYPSNIHQFRKRHKRSKQI*ICMPEN Trigger: GTTCTCAGGCATACAGATTCAAATCTGCTTGGATCT...TTTATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR-3UTR TCA 90 bp | CATAAAGACAAGATCCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTGAATGGCTTAATACTTaGTACAGAAGGTATCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HKDKIQPLSVFSVTVYHGEWLNT*YRRYPF Trigger: GAAGGGATACCTTCTGTATCAAGTATTAAGCCATTC...ACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGGATCTTGTCTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CAA 90 bp | TTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTaGCCATGTAGGTTAATTAAACAGAATATACCACAAACTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FTMVLAKVRKNTGWG*PCRLIKQNIPQTLF Trigger: AAACAAAGTTTGTGGTATATTCTGTTTAATTAACCTACATGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGCATGATAGACCTTCGATAGAAAACGGCCTTTTAAATTCAGAATTGAGTATTAGATTTGAATCTGTATaGCTGAGAACTGTTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: EHDRPSIENGLLNSELSIRFESV*LRTVGT Trigger: TGTCCCAACAGTTCTCAGGCATACAGATTCAAATCT...AATACTCAATTCTGAATTTAAAAGGCCGTTTTCTATCGAAGGTCTATCATGCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR-3UTR TCA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAAGAGTAAAAAGACTATaGCATCAGCAAATGTTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: QMSICCFKKLYLRSTRYPRVKRL*HQQMLD Trigger: GTCCAACATTTGCTGATGTCATAGTCTTTTTACTCT...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACTTGAACCTGAAGATCAGACCCTCATAGTGCAGCCTCCGGACTTTGCTCATCGGATCTTGTCACACTaGTTAGGTCCCCAAGGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: ELEPEDQTLIVQPPDFAHRILSH*LGPQGA Trigger: GGCGCCTTGGGGACCTAACAAGTGTGACAAGATCCG...ATGAGCAAAGTCCGGAGGCTGCACTATGAGGGTCTGATCTTCAGGTTCAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR GCA 72 bp | GTTGGTCCATCTACATGGGTTATAGTGGTAGTAAGCTaGAGTTCTTCCCCGCTGTGGACACCCAGGTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: VGPSTWVIVVVS*SSSPLWTPRSP Trigger: TGGTGACCTGGGTGTCCACAGCGGGGAAGAACTGCAGCTTACTACCACTATAACCCATGTAGATGGACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CCA 72 bp | ACCCTCATAGTGCAGCCTCCGGACTTTGCTCATGGCTaGGAGGCTAGACTGCTTCCCACTGATGTTTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLIVQPPDFAHG*EARLLPTDVSK Trigger: TTTAGAAACATCAGTGGGAAGCAGTCTAGCCTCCCAGCCATGAGCAAAGTCCGGAGGCTGCACTATGAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CCA 72 bp | CCACACATTTTATTGCCGTGTAGGGTACTGCTGTTGTaGGTGCTGGAGTTGAGACAGGGTCCCACTAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PHILLPCRVLLL*VLELRQGPTKL Trigger: CAACTTAGTGGGACCCTGTCTCAACTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAATAGAGGCAGAGGCAGATACCTGCCACAATGATGAAAGCCATAGCCAGAAGGCGCCAGCCATCTaGTTTTATGGTGGTTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: QEIEAEADTCHNDESHSQKAPAI*FYGGSY Trigger: GTAAGAACCACCATAAAACAAGATGGCTGGCGCCTT...CTGGCTATGGCTTTCATCATTGTGGCAGGTATCTGCCTCTGCCTCTATTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR GCA 72 bp | TCCAGCTCAGTGCCATACCATAGCCTCCTATTCCTGTaGTTCTTTACGGGTCAACTTGTAGATCTCAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSVPYHSLLFL*FFTGQLVDLSW Trigger: CCAACTGAGATCTACAAGTTGACCCGTAAAGAAGCACAGGAATAGGAGGCTATGGTATGGCACTGAGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR GCA 72 bp | TGGGTACTCCAAGATCCAAGCAGATTTGAATCTGTATaGCTGAGAACTGTTGGGACAGGAAGGGGTGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: WVLQDPSRFESV*LRTVGTGRGAY Trigger: ATATGCACCCCTTCCTGTCCCAACAGTTCTCAGGCATACAGATTCAAATCTGCTTGGATCTTGGAGTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR GCA 72 bp | TTTATGGTGGTTCTTACGGACATCCACACATTTTATTaGCGTGTAGGGTACTGCTGTTGTGGGTGCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FMVVLTDIHTFY*RVGYCCCGCWS Trigger: ACTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGAACCACCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR GCA 72 bp | GCCAACAGCAATTGGTCCAACTTGCTTCCAGTACCCTaGAATGTGATTCCGTTCATGTTGATCCATCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ANSNWSNLLPVP*NVIPFMLIHHV Trigger: CACATGATGGATCAACATGAACGGAATCACATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGCTGTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGCAGATACCTGCCACAATGATGAAAGCCATAGCCAGTTCTGTTCCAACATTGCTTCAATTTCCCTaGGAATTGCTTCCTCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: QRQIPATMMKAIASSVPTLLQFP*ELLPRC Trigger: ACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAA...TGTTGGAACAGAACTGGCTATGGCTTTCATCATTGTGGCAGGTATCTGCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CCA 72 bp | GTCAAATATGAAGAGGCAGAAGGAGCCAACAGCAATTaGTCCAACTTGCTTCCAGTACCCTGCAATGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: VKYEEAEGANSN*SNLLPVPCNVI Trigger: AATCACATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCTTCTGCCTCTTCATATTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR TCA 72 bp | TACTCCAAGATCCAAGCAGATTTGAATCTGTATGCCTaGGAACTGTTGGGACAGGAAGGGGTGCATATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: YSKIQADLNLYA*ELLGQEGVHIY Trigger: GTAAATATGCACCCCTTCCTGTCCCAACAGTTCTCAGGCATACAGATTCAAATCTGCTTGGATCTTGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CCA 72 bp | ACCTCCAGAAATACTCAAGCTATTTCTGCCAGCACCTaGGTACTCCAAGATCCAAGCAGATTTGAATCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TSRNTQAISAST*VLQDPSRFESV Trigger: TACAGATTCAAATCTGCTTGGATCTTGGAGTACCCAGGTGCTGGCAGAAATAGCTTGAGTATTTCTGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CCA 72 bp | AAAGCAATGTCTAGCTGCAAGATAAACAGCATAAACTaGAACCATGGACTCATCTCCATAGAAGGGAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KAMSSCKINSIN*NHGLISIEGRG Trigger: TCCCCTCCCTTCTATGGAGATGAGTCCATGGTTCCAGTTTATGCTGTTTATCTTGCAGCTAGACATTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CCA 72 bp | TTCATAGCAAACCATACCTTAGTGAAACCTCCGTTTTaGTGGATTCCCACCAACCGAATGTCCTTTATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FIANHTLVKPPF*WIPTNRMSFIS Trigger: GGAGATAAAGGACATTCGGTTGGTGGGAATCCACCAAAACGGAGGTTTCACTAAGGTATGGTTTGCTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CCA 72 bp | CTGTGCTTCTTTACGGGTCAACTTGTAGATCTCAGTTaGTCCATCTACATGGGTTATAGTGGTAGTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCFFTGQLVDLS*SIYMGYSGSKL Trigger: CAGCTTACTACCACTATAACCCATGTAGATGGACCAACTGAGATCTACAAGTTGACCCGTAAAGAAGCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR TCA 72 bp | GTATGCGGGTATAAAGCATCTGATTCCTCATGTATGTaGGCATTCCTTGCTGGCCTAGAATGGCTTAATACT | + |
|
Preference number: 3 (lower is better) Translates to: VCGYKASDSSCM*AFLAGLEWLNT Trigger: AGTATTAAGCCATTCTAGGCCAGCAAGGAATGCTCACATACATGAGGAATCAGATGCTTTATACCCGCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR TCA 72 bp | GTTCATGTTGATCCATCATGTGCTCGCCACAGAAGATaGTCCAGAAAGAAAGAAGCATTGCATAGAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: VHVDPSCARHRR*SRKKEALHRRC Trigger: GCATCTTCTATGCAATGCTTCTTTCTTTCTGGATCATCTTCTGTGGCGAGCACATGATGGATCAACATGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR GCA 72 bp | AGGGAGGGGAATGTGTACAGAAAACACAATGTCATTTaGTTCAATTTCCCTTGGAATTGCTTCCTCGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: REGNVYRKHNVI*FNFPWNCFLDV Trigger: GACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAATGACATTGTGTTTTCTGTACACATTCCCCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CCA 72 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATaGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: PTFKCFLCHCLP*FWPKLGKTQDG Trigger: CCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGAGTAAAAAGACTATGACATCAGCAAATGTTGGACTGCAAAGAATGTTTGTAGTGGCAGAAGTTTaGCAACAGCCACCATTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EESKKTMTSANVGLQRMFVVAEV*QQPPLE Trigger: CTCCAATGGTGGCTGTTGCAAAACTTCTGCCACTAC...AAACATTCTTTGCAGTCCAACATTTGCTGATGTCATAGTCTTTTTACTCTCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAGATGATCCAGAAAGAAAGAAGCATTGCATAGAAGATGCCCTGTCGGATATTTGGTTGTTCAGCTaGAAAGCAATGTCTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TEDDPERKKHCIEDALSDIWLFS*KAMSSC Trigger: GCAGCTAGACATTGCTTTCAAGCTGAACAACCAAAT...ATCCGACAGGGCATCTTCTATGCAATGCTTCTTTCTTTCTGGATCATCTTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR TCA 72 bp | ATGATCCTGGGAGATAAAAATACGAAAGCATATTCATaGGAGTCAGCATGCACCAGCAACTTGGCTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: MILGDKNTKAYS*ESACTSNLASS Trigger: TGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCTTTCGTATTTTTATCTCCCAGGATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| 3UTR CCA 72 bp | TTAGGTGGCAGATCAGTAAGTGGATGTTGGGTACAATaGATCACATACCCATCTAACATTCACCAGTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGGRSVSGCWVQ*ITYPSNIHQFR Trigger: TCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTACCCAACATCCACTTACTGATCTGCCACCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CCA 72 bp | ACCATTAGACTGGTCTTCCCCATAGTTCTTATGGGATaGTGCATACAAGAACATCAAAGCAAAGACATACAG | + |
|
Preference number: 3 (lower is better) Translates to: TIRLVFPIVLMG*CIQEHQSKDIQ Trigger: CTGTATGTCTTTGCTTTGATGTTCTTGTATGCACCATCCCATAAGAACTATGGGGAAGACCAGTCTAATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAGTAGTGGCAGAAGTTTaGCAACAGCCACCATTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QMSICCFKKLYLRSTRYPVVAEV*QQPPLE Trigger: CTCCAATGGTGGCTGTTGCAAAACTTCTGCCACTAC...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAAGGAGCCAACAGCAATaGGTCCAACTTGCTTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QMSICCFKKLYLRSTRYPRSQQQ*VQLASS Trigger: ACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCT...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | CATACAAGAACATCAAAGCAAAGACATACAGGTTCCACATCCCATAGATTCCAGTGCATTTTCTCTGATTaGGTTGTTCAGCTTGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HTRTSKQRHTGSTSHRFQCIFSD*VVQLES Trigger: GCTTTCAAGCTGAACAACCAAATCAGAGAAAATGCA...CTGGAATCTATGGGATGTGGAACCTGTATGTCTTTGCTTTGATGTTCTTGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR TCA 72 bp | GCAGAAGTTTTGCAACAGCCACCATTGGAGGTCATCTaGCAAATGTCCATCTGTTGTTTTAAGAAACTATAC | + |
|
Preference number: 3 (lower is better) Translates to: AEVLQQPPLEVI*QMSICCFKKLY Trigger: GTATAGTTTCTTAAAACAACAGATGGACATTTGTCAGATGACCTCCAATGGTGGCTGTTGCAAAACTTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
||
| 3UTR GCA 72 bp | AAACACAATGTCATTTGCTTCAATTTCCCTTGGAATTaGTTCCTCGATGTCACGGATCTTGTCACACTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KHNVICFNFPWN*FLDVTDLVTLV Trigger: AACAAGTGTGACAAGATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAATGACATTGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CCA 72 bp | TCTTTATACTTAGGTGGCAGATCAGTAAGTGGATGTTaGGTACAATGGATCACATACCCATCTAACATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLYLGGRSVSGC*VQWITYPSNIH Trigger: GTGAATGTTAGATGGGTATGTGATCCATTGTACCCAACATCCACTTACTGATCTGCCACCTAAGTATAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CCA 72 bp | TACAGAAAACACAATGTCATTTGCTTCAATTTCCCTTaGAATTGCTTCCTCGATGTCACGGATCTTGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: YRKHNVICFNFP*NCFLDVTDLVT Trigger: TGTGACAAGATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAATGACATTGTGTTTTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTAATCAAATACACAGATTaGGTTCCAAAGCTGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLIKYTD*VPKLKC Trigger: GCATTTCAGCTTTGGAACCAAATCTGTGTATTTGAT...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CCA 72 bp | ACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATaGGGTTTGCCATGTAGGTTAATTAAACAGAATATA | + |
|
Preference number: 3 (lower is better) Translates to: TMVLAKVRKNTG*GLPCRLIKQNI Trigger: TATATTCTGTTTAATTAACCTACATGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CCA 72 bp | GTAAAAGTACATTTGAGTTTACGTGGTACTCTTTCATaGGCCATTTCAGTCCATTCAGAAAACATATCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VKVHLSLRGTLS*AISVHSENISS Trigger: TGATGATATGTTTTCTGAATGGACTGAAATGGCCCATGAAAGAGTACCACGTAAACTCAAATGTACTTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCAGGGTACTGCTGTTGTaGGTGCTGGAGCGATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNARVLLL*VLERSS Trigger: GCTTGATCGCTCCAGCACCCACAACAGCAGTACCCT...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCGACTTTGCTCATGGCTaGGAGGCTAGACTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNADFAHG*EARLLP Trigger: GGGAAGCAGTCTAGCCTCCCAGCCATGAGCAAAGTC...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCAGTTCTTCCCCGCTGTaGACACCCAGGTCACCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNASSSPL*TPRSPL Trigger: TAATGGTGACCTGGGTGTCCACAGCGGGGAAGAACT...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCGCTCGCCACAGAAGATaGTCCAGAAAGAAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNAARHRR*SRKKEA Trigger: TGCTTCTTTCTTTCTGGATCATCTTCTGTGGCGAGC...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCGGAGCCAACAGCAATTaGTCCAACTTGCTTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNAGANSN*SNLLPV Trigger: TACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCC...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCCACACATGTCAAATATaGAGAGGCAGAAGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNAHTCQI*RGRRSQ Trigger: TTGGCTCCTTCTGCCTCTTCATATTTGACATGTGTG...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCTTTCCAATGGCCTTCTaGCACCTGACTAACGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNAFPMAF*HLTNDE Trigger: TTCATCGTTAGTCAGGTGTCAGAAGGCCATTGGAAA...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCTCCCATAGATTCCAGTaGAGAAAGCACTGCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNASHRFQ*RKHCSL Trigger: AAGTGAGCAGTGCTTTCTTCACTGGAATCTATGGGA...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTACGACCTTCGTGCTCTaGGGTCTTGGGGGATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPTTFVL*GLGGCK Trigger: TTTACATCCCCCAAGACCCCAGAGCACGAAGGTCGT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTAGTTCTTCCCCGCTGTaGACACCCAGGTCACCATTA | + |
|
Preference number: 4 (lower is better) Translates to: QTIPRSIPLYVRVTNPPASSSPL*TPRSPL Trigger: TAATGGTGACCTGGGTGTCCACAGCGGGGAAGAACT...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCGAAAGAAAGAAGCATTaGATAGAAGATGCCCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNAERKKH*IEDALS Trigger: CGACAGGGCATCTTCTATGCAATGCTTCTTTCTTTC...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTATAGTGGTAGTAAGCTaGAGTTCTTCCCCGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPIVVVS*SSSPLW Trigger: CCACAGCGGGGAAGAACTGCAGCTTACTACCACTAT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCAGCCATCTTGTTTTATaGTGGTTCTTACGGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNASHLVL*WFLRTS Trigger: GGATGTCCGTAAGAACCACCATAAAACAAGATGGCT...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCTGCTTCAATTTCCCTTaGAATTGCTTCCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNACFNFP*NCFLDV Trigger: GACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCA...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| 3UTR CAA 72 bp | GGAATTGCTTCCTCGATGTCACGGATCTTGTCACACTaGTTAGGTCCCCAAGGCGCCAGCCATCTTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GIASSMSRILSH*LGPQGASHLVL Trigger: TAAAACAAGATGGCTGGCGCCTTGGGGACCTAACAAGTGTGACAAGATCCGTGACATCGAGGAAGCAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| 3UTR CAA 72 bp | GAAGAGGCAGAAGGAGCCAACAGCAATTGGTCCAACTaGCTTCCAGTACCCTGCAATGTGATTCCGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: EEAEGANSNWSN*LPVPCNVIPFM Trigger: CATGAACGGAATCACATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCTTCTGCCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCGTCGGGACATCATGGTaGTCCTCCTCCAATACCACA | + |
|
Preference number: 4 (lower is better) Translates to: HCLPWFWPKLGKTQDGVCVGTSW*SSSNTT Trigger: TGTGGTATTGGAGGAGGATCACCATGATGTCCCGAC...GCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR TCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTTGCTCACTTGAACTGTaGCACCACCCCATTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPCSLEL*HHPISN Trigger: ATTGGAAATGGGGTGGTGTCACAGTTCAAGTGAGCA...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGCATTGCATAGAAGATaGCCTGTCGGATGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPALHRR*PVGCHQ Trigger: TTGGTGACATCCGACAGGGCATCTTCTATGCAATGC...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGCAATTGGTCCAACTTaGTTCCAGTACCCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPAIGPT*FQYPAM Trigger: CATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGC...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCGTTCTTATGGGATGGTaGATACAAGAACATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNAVLMGW*IQEHQS Trigger: GCTTTGATGTTCTTGTATGCACCATCCCATAAGAAC...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCCAACGACCTTCGTGCTCTaGGGTCTTGGGGGATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTMVLAKVRKNTGWGLPTTFVL*GLGGCK Trigger: TTTACATCCCCCAAGACCCCAGAGCACGAAGGTCGT...TGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTGGAGCCAACAGCAATTaGTCCAACTTGCTTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTIPRSIPLYVRVTNPPAGANSN*SNLLPV Trigger: TACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCC...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR TCA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTCACACATGTCAAATATaGAGAGGCAGAAGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTIPRSIPLYVRVTNPPAHTCQI*RGRRSQ Trigger: TTGGCTCCTTCTGCCTCTTCATATTTGACATGTGTG...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAATCCCTCCAACAATaGAGAGCTTCTTGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPESLQQ*RASWYS Trigger: TGAGTACCAAGAAGCTCTGCATTGTTGGAGGGATTC...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCGCATTTTCTCTGATTTaGTTGTTCAGCTTGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESACTSNLASSPALRMNAAFSLI*LFSLKA Trigger: TGCTTTCAAGCTGAACAACCAAATCAGAGAAAATGC...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTCGTGGTACTCTTTCATaGGCCATTTCAGTCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPRGTLS*AISVHS Trigger: TGAATGGACTGAAATGGCCCATGAAAGAGTACCACG...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR TCA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTTTTGGTTGTTCAGCTTaGAAGCAATGTCTAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTIPRSIPLYVRVTNPPAFGCSA*KQCLAA Trigger: TGCAGCTAGACATTGCTTTCAAGCTGAACAACCAAA...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR TCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTTTTGGTTGTTCAGCTTaGAAGCAATGTCTAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPFGCSA*KQCLAA Trigger: TGCAGCTAGACATTGCTTTCAAGCTGAACAACCAAA...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR TCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTATACTTATGAGCCACTaGCCCAATTTCCATGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPILMSH*PNFHER Trigger: CCTTTCATGGAAATTGGGTCAGTGGCTCATAAGTAT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR GCA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTAATTTCCCTTGGAATTaGTTCCTCGATGTCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTIPRSIPLYVRVTNPPANFPWN*FLDVTD Trigger: ATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATT...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTAATTTCCCTTGGAATTaGTTCCTCGATGTCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPNFPWN*FLDVTD Trigger: ATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTAAGGGTACTGCTGTTGTaGGTGCTGGAGCGATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLRVLLL*VLERSS Trigger: GCTTGATCGCTCCAGCACCCACAACAGCAGTACCCT...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTCATAAACTGGAACCATaGACTCATCTCCATAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTIPRSIPLYVRVTNPPAHKLEP*THLHRR Trigger: CCTTCTATGGAGATGAGTCCATGGTTCCAGTTTATG...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTCATAAACTGGAACCATaGACTCATCTCCATAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPHKLEP*THLHRR Trigger: CCTTCTATGGAGATGAGTCCATGGTTCCAGTTTATG...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| 3UTR CAA 72 bp | TTGCTTCCAGTACCCTGCAATGTGATTCCGTTCATGTaGATCCATCATGTGCTCGCCACAGAAGATGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVPCNVIPFM*IHHVLATEDDP Trigger: TGGATCATCTTCTGTGGCGAGCACATGATGGATCAACATGAACGGAATCACATTGCAGGGTACTGGAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCCATTTCCAATGGCCTTCTaGCACCTGACTAACGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTMVLAKVRKNTGWGLPFPMAF*HLTNDE Trigger: TTCATCGTTAGTCAGGTGTCAGAAGGCCATTGGAAA...TGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR TCA 90 bp | CTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCCATCCCATAGATTCCAGTaGAGAAAGCACTGCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTMVLAKVRKNTGWGLPSHRFQ*RKHCSL Trigger: AAGTGAGCAGTGCTTTCTTCACTGGAATCTATGGGA...TGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTAGAAAGGCAACGATTTaGAAAACCAGAAGAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPRKATI*KTRRIP Trigger: AGGGATTCTTCTGGTTTTCCAAATCGTTGCCTTTCT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTATAAACAGCATAAACTaGAACCATGGACTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPINSIN*NHGLIS Trigger: GGAGATGAGTCCATGGTTCCAGTTTATGCTGTTTAT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTACATTTGAGTTTACGTaGTACTCTTTCATGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPTFEFT*YSFMGH Trigger: ATGGCCCATGAAAGAGTACCACGTAAACTCAAATGT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTCTTGTAGATCTCAGTTaGTCCATCTACATGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPLVDLS*SIYMGY Trigger: ATAACCCATGTAGATGGACCAACTGAGATCTACAAG...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR TCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTATACCTGAAATACCATaGAGCACAGAAACAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPIPEIP*STETGN Trigger: ATTTCCTGTTTCTGTGCTTCATGGTATTTCAGGTAT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCAGCCATCTTGTTTTATaGTGGTTCTTACGGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: HCLPWFWPKLGKTQDGVCSHLVL*WFLRTS Trigger: GGATGTCCGTAAGAACCACCATAAAACAAGATGGCT...GCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR CAA 72 bp | CTTCATAGCAAACCATACCTTAGTGAAACCTCCGTTTaGGTGGATTCCCACCAACCGAATGTCCTTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHSKPYLSETSV*VDSHQPNVLYL Trigger: GAGATAAAGGACATTCGGTTGGTGGGAATCCACCAAAACGGAGGTTTCACTAAGGTATGGTTTGCTATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| CDS-3UTR GCA 90 bp | CACTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCGTTCTTATGGGATGGTaGATACAAGAACATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCLPWFWPKLGKTQDGVCVLMGW*IQEHQS Trigger: GCTTTGATGTTCTTGTATGCACCATCCCATAAGAAC...GCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR CCA 90 bp | GTACAATGGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCATAAAGACTTTGCTCATGGCTaGGAGGCTAGACTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQWITYPSNIHQFRKRHKDFAHG*EARLLP Trigger: GGGAAGCAGTCTAGCCTCCCAGCCATGAGCAAAGTC...TTTATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR CCA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTATAGTTCTTATGGGATaGTGCATACAAGAACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRVSMHQQLGFITCPIVLMG*CIQEHQ Trigger: TTGATGTTCTTGTATGCACCATCCCATAAGAACTAT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCCACTTGTAGATCTCAGTTaGTCCATCTACATGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFTMVLAKVRKNTGWGLPLVDLS*SIYMGY Trigger: ATAACCCATGTAGATGGACCAACTGAGATCTACAAG...TGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAGTAAAAAGACTATGACATCAGCAAATGTTGGACTGCAAAGAATGTTTATAGTGGTAGTAAGCTaGAGTTCTTCCCCGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EESKKTMTSANVGLQRMFIVVVS*SSSPLW Trigger: CCACAGCGGGGAAGAACTGCAGCTTACTACCACTAT...AAACATTCTTTGCAGTCCAACATTTGCTGATGTCATAGTCTTTTTACTCTCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| 3UTR CAA 72 bp | GTACAGAAAACACAATGTCATTTGCTTCAATTTCCCTaGGAATTGCTTCCTCGATGTCACGGATCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQKTQCHLLQFP*ELLPRCHGSCH Trigger: GTGACAAGATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAATGACATTGTGTTTTCTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| CDS-3UTR GCA 90 bp | AATTTCCATGAAAGGAAGGACATCACAATTATAATAACGACCTTCGTGCTCTGGGAATCCCTCCAACAATaGAGAGCTTCTTGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFHERKDITIIITTFVLWESLQQ*RASWYS Trigger: TGAGTACCAAGAAGCTCTGCATTGTTGGAGGGATTC...CCAGAGCACGAAGGTCGTTATTATAATTGTGATGTCCTTCCTTTCATGGAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTATGCTTCAATTTCCCTTaGAATTGCTTCCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLCFNFP*NCFLDV Trigger: GACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCA...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACCATGGTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTTGCCAATAGTTCTTATGGGATaGTGCATACAAGAACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTMVLAKVRKNTGWGLPIVLMG*CIQEHQ Trigger: TTGATGTTCTTGTATGCACCATCCCATAAGAACTAT...TGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGGTAAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR TCA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAGCTCGCCACAGAAGATaGTCCAGAAAGAAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QMSICCFKKLYLRSTRYPARHRR*SRKKEA Trigger: TGCTTCTTTCTTTCTGGATCATCTTCTGTGGCGAGC...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
||
| CDS-3UTR TCA 90 bp | GTACAATGGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCATAAATGCTCACTTGAACTGTaGCACCACCCCATTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VQWITYPSNIHQFRKRHKCSLEL*HHPISN Trigger: ATTGGAAATGGGGTGGTGTCACAGTTCAAGTGAGCA...TTTATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR GCA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAGCATTGCATAGAAGATaGCCTGTCGGATGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QMSICCFKKLYLRSTRYPALHRR*PVGCHQ Trigger: TTGGTGACATCCGACAGGGCATCTTCTATGCAATGC...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR GCA 90 bp | GTACAATGGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCATAAAGCAATTGGTCCAACTTaGTTCCAGTACCCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VQWITYPSNIHQFRKRHKAIGPT*FQYPAM Trigger: CATTGCAGGGTACTGGAAGCAAGTTGGACCAATTGC...TTTATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTAATAAACAGCATAAACTaGAACCATGGACTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLINSIN*NHGLIS Trigger: GGAGATGAGTCCATGGTTCCAGTTTATGCTGTTTAT...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CCA 90 bp | CATAAAGACAAGATCCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTCGTGGTACTCTTTCATaGGCCATTTCAGTCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKDKIQPLSVFSVTVYHGRGTLS*AISVHS Trigger: TGAATGGACTGAAATGGCCCATGAAAGAGTACCACG...ACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGGATCTTGTCTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTAACATTTGAGTTTACGTaGTACTCTTTCATGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLTFEFT*YSFMGH Trigger: ATGGCCCATGAAAGAGTACCACGTAAACTCAAATGT...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR CAA 72 bp | AAAACACAATGTCATTTGCTTCAATTTCCCTTGGAATaGCTTCCTCGATGTCACGGATCTTGTCACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTQCHLLQFPLE*LPRCHGSCHTC Trigger: ACAAGTGTGACAAGATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAATGACATTGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| CDS-3UTR GCA 90 bp | GAGCATGATAGACCTTCGATAGAAAACGGCCTTTTAAATTCAGAATTGAGTATTGAATCCCTCCAACAATaGAGAGCTTCTTGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EHDRPSIENGLLNSELSIESLQQ*RASWYS Trigger: TGAGTACCAAGAAGCTCTGCATTGTTGGAGGGATTC...AATACTCAATTCTGAATTTAAAAGGCCGTTTTCTATCGAAGGTCTATCATGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR GCA 90 bp | GAGGAGAGTAAAAAGACTATGACATCAGCAAATGTTGGACTGCAAAGAATGTTTGAAAGAAAGAAGCATTaGATAGAAGATGCCCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EESKKTMTSANVGLQRMFERKKH*IEDALS Trigger: CGACAGGGCATCTTCTATGCAATGCTTCTTTCTTTC...AAACATTCTTTGCAGTCCAACATTTGCTGATGTCATAGTCTTTTTACTCTCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CCA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTAGCATTTTCTCTGATTTaGTTGTTCAGCTTGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLAFSLI*LFSLKA Trigger: TGCTTTCAAGCTGAACAACCAAATCAGAGAAAATGC...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| 3UTR CAA 72 bp | GTTCTGGCCAAAGTTAGGAAAAACACAGGATGGGGTTaGCCATGTAGGTTAATTAAACAGAATATACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VLAKVRKNTGWG*PCRLIKQNIPQ Trigger: TTGTGGTATATTCTGTTTAATTAACCTACATGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR TCA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAATACTTATGAGCCACTaGCCCAATTTCCATGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QMSICCFKKLYLRSTRYPILMSH*PNFHER Trigger: CCTTTCATGGAAATTGGGTCAGTGGCTCATAAGTAT...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGTAAAAAGACTATGACATCAGCAAATGTTGGACTGCAAAGAATGTTTAGAAAGGCAACGATTTaGAAAACCAGAAGAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EESKKTMTSANVGLQRMFRKATI*KTRRIP Trigger: AGGGATTCTTCTGGTTTTCCAAATCGTTGCCTTTCT...AAACATTCTTTGCAGTCCAACATTTGCTGATGTCATAGTCTTTTTACTCTCCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000200191.2 |
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| CDS-3UTR CCA 90 bp | CAGTCAAATCCAATAGAAAACCATTCCACAGGGATATTGATAAAGGTCATGGAAAGAAAGGCAACGATTTaGAAAACCAGAAGAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSNPIENHSTGILIKVMERKATI*KTRRIP Trigger: AGGGATTCTTCTGGTTTTCCAAATCGTTGCCTTTCT...TTCCATGACCTTTATCAATATCCCTGTGGAATGGTTTTCTATTGGATTTGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200191.2 |
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| CDS-3UTR TCA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAATACCTGAAATACCATaGAGCACAGAAACAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QMSICCFKKLYLRSTRYPIPEIP*STETGN Trigger: ATTTCCTGTTTCTGTGCTTCATGGTATTTCAGGTAT...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCCGGATCTTGTCACACTaGTTAGGTCCCCAAGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESACTSNLASSPALRMNARILSH*LGPQGA Trigger: GGCGCCTTGGGGACCTAACAAGTGTGACAAGATCCG...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS GCA 90 bp | GTGGTTCTTACGGACATCCACACATTTTATTGCCGTGTAGGGTACTaGTGTTGTGGGTGCTGGAGCGATCAAGCCTCCCACCAGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVLTDIHTFYCRVGY*CCGCWSDQASHQKG Trigger: GCCTTTCTGGTGGGAGGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCAGGAGCCAACAGCAATaGGTCCAACTTGCTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESACTSNLASSPALRMNARSQQQ*VQLASS Trigger: ACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCT...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS CCA 90 bp | GTGGGTGCTGGAGCGATCAAGCCTCCCACCAGAAAGGCAACGATTTaGAAAACCAGAAGAATCCCTCCAACAATGCAGAGCTTCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VGAGAIKPPTRKATI*KTRRIPPTMQSFLV Trigger: TACCAAGAAGCTCTGCATTGTTGGAGGGATTCTTCTGGTTTTCCAAATCGTTGCCTTTCTGGTGGGAGGCTTGATCGCTCCAGCACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCTTGCTTCAATTTCCCTaGGAATTGCTTCCTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: ESACTSNLASSPALRMNALLQFP*ELLPRC Trigger: ACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAA...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCAGAAAGAAAGAAGCATaGCATAGAAGATGCCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESACTSNLASSPALRMNARKKEA*HRRCPV Trigger: GACAGGGCATCTTCTATGCAATGCTTCTTTCTTTCT...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | CAAACCATCCCAAGGAGTATACCCCTCTATGTGAGGGTTACTAACCCACCTGCTAGGAGCCAACAGCAATaGGTCCAACTTGCTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTIPRSIPLYVRVTNPPARSQQQ*VQLASS Trigger: ACTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCT...AGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS GCA 90 bp | CCATCTTGTTTTATGGTGGTTCTTACGGACATCCACACATTTTATTaGCGTGTAGGGTACTGCTGTTGTGGGTGCTGGAGCGATCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSCFMVVLTDIHTFY*RVGYCCCGCWSDQA Trigger: GGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGAACCACCATAAAACAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTAAGGCGCCAGCCATCTaGTTTTATGGTGGTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SIFMRVSMHQQLGFITCPKAPAI*FYGGSY Trigger: GTAAGAACCACCATAAAACAAGATGGCTGGCGCCTT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCTGCATTTTCTCTGATTaGGTTGTTCAGCTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESACTSNLASSPALRMNACIFSD*VVQLES Trigger: GCTTTCAAGCTGAACAACCAAATCAGAGAAAATGCA...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCCATTCCACAGGGATATaGATAAAGGTCATGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: ESACTSNLASSPALRMNAHSTGI*IKVMEI Trigger: GATTTCCATGACCTTTATCAATATCCCTGTGGAATG...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTGAGGATGAATGCCGAAAGGATTTGTGAGTaGTACTCCTCTTTCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: ESACTSNLASSPALRMNAERICE*YSSFTH Trigger: ATGTGTGAAAGAGGAGTACAACTCACAAATCCTTTC...GGCATTCATCCTCAGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
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| CDS-3UTR CAA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTACGGATCTTGTCACACTaGTTAGGTCCCCAAGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLRILSH*LGPQGA Trigger: GGCGCCTTGGGGACCTAACAAGTGTGACAAGATCCG...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | AGCATATTCATGAGAGTCAGCATGCACCAGCAACTTGGCTTCATCACCTGCCCTATTTGGTTGTTCAGCTaGAAAGCAATGTCTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SIFMRVSMHQQLGFITCPIWLFS*KAMSSC Trigger: GCAGCTAGACATTGCTTTCAAGCTGAACAACCAAAT...AGGGCAGGTGATGAAGCCAAGTTGCTGGTGCATGCTGACTCTCATGAATATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198878.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGAGTAAAAAGACTATGACATCAGCAAATGTTGGACTGCAAAGAATGTTTCAATTTCCCTTGGAATaGCTTCCTCGATGTCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: EESKKTMTSANVGLQRMFQFPLE*LPRCHG Trigger: TCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTG...AAACATTCTTTGCAGTCCAACATTTGCTGATGTCATAGTCTTTTTACTCTCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | GTACAATGGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCATAAAAAGGCGCCAGCCATCTaGTTTTATGGTGGTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VQWITYPSNIHQFRKRHKKAPAI*FYGGSY Trigger: GTAAGAACCACCATAAAACAAGATGGCTGGCGCCTT...TTTATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | CCAACCTTTAAGTGTTTTCTCTGTCACTGTTTACCATGGTTCTGGCCAAAGTTATGCATTTTCTCTGATTaGGTTGTTCAGCTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTFKCFLCHCLPWFWPKLCIFSD*VVQLES Trigger: GCTTTCAAGCTGAACAACCAAATCAGAGAAAATGCA...TAACTTTGGCCAGAACCATGGTAAACAGTGACAGAGAAAACACTTAAAGGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | GTACAATGGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCATAAATTGCTTCAATTTCCCTaGGAATTGCTTCCTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: VQWITYPSNIHQFRKRHKLLQFP*ELLPRC Trigger: ACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAA...TTTATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | GAGCATGATAGACCTTCGATAGAAAACGGCCTTTTAAATTCAGAATTGAGTATTATTTGGTTGTTCAGCTaGAAAGCAATGTCTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EHDRPSIENGLLNSELSIIWLFS*KAMSSC Trigger: GCAGCTAGACATTGCTTTCAAGCTGAACAACCAAAT...AATACTCAATTCTGAATTTAAAAGGCCGTTTTCTATCGAAGGTCTATCATGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAAGAAAGAAAGAAGCATaGCATAGAAGATGCCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QMSICCFKKLYLRSTRYPRKKEA*HRRCPV Trigger: GACAGGGCATCTTCTATGCAATGCTTCTTTCTTTCT...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | GTACAATGGATCACATACCCATCTAACATTCACCAGTTTAGAAAAAGGCATAAACATTCCACAGGGATATaGATAAAGGTCATGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: VQWITYPSNIHQFRKRHKHSTGI*IKVMEI Trigger: GATTTCCATGACCTTTATCAATATCCCTGTGGAATG...TTTATGCCTTTTTCTAAACTGGTGAATGTTAGATGGGTATGTGATCCATTGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS-3UTR CAA 90 bp | CAAATGTCCATCTGTTGTTTTAAGAAACTATACCTAAGAAGCACTAGGTATCCAGAAAGGATTTGTGAGTaGTACTCCTCTTTCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: QMSICCFKKLYLRSTRYPERICE*YSSFTH Trigger: ATGTGTGAAAGAGGAGTACAACTCACAAATCCTTTC...TGGATACCTAGTGCTTCTTAGGTATAGTTTCTTAAAACAACAGATGGACATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068952.10 |
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| CDS GCA 72 bp | ACGGACATCCACACATTTTATTGCCGTGTAGGGTACTaGTGTTGTGGGTGCTGGAGCGATCAAGCCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TDIHTFYCRVGY*CCGCWSDQASH Trigger: GTGGGAGGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
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| CDS CCA 72 bp | CCACACATTTTATTGCCGTGTAGGGTACTGCTGTTGTaGGTGCTGGAGCGATCAAGCCTCCCACCAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHILLPCRVLLL*VLERSSLPPER Trigger: CCTTTCTGGTGGGAGGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
||
| CDS GCA 72 bp | ACATTTTATTGCCGTGTAGGGTACTGCTGTTGTGGGTaGTGGAGCGATCAAGCCTCCCACCAGAAAGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TFYCRVGYCCCG*WSDQASHQKGN Trigger: GTTGCCTTTCTGGTGGGAGGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
||
| CDS CCA 72 bp | TTTTATTGCCGTGTAGGGTACTGCTGTTGTGGGTGCTaGAGCGATCAAGCCTCCCACCAGAAAGGCAACGAT | + |
|
Preference number: 6 (lower is better) Translates to: FYCRVGYCCCGC*SDQASHQKGND Trigger: ATCGTTGCCTTTCTGGTGGGAGGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
||
| CDS CAA 72 bp | CATCCACACATTTTATTGCCGTGTAGGGTACTGCTGTaGTGGGTGCTGGAGCGATCAAGCCTCCCACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HPHILLPCRVLL*WVLERSSLPPE Trigger: TTCTGGTGGGAGGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
||
| CDS CAA 90 bp | TCTTACGGACATCCACACATTTTATTGCCGTGTAGGGTACTGCTGTaGTGGGTGCTGGAGCGATCAAGCCTCCCACCAGAAAGGCAACGA | + |
|
Preference number: 6 (lower is better) Translates to: SYGHPHILLPCRVLL*WVLERSSLPPERQR Trigger: TCGTTGCCTTTCTGGTGGGAGGCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
||
| CDS CAA 90 bp | GCCATCTTGTTTTATGGTGGTTCTTACGGACATCCACACATTTTATaGCCGTGTAGGGTACTGCTGTTGTGGGTGCTGGAGCGATCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AILFYGGSYGHPHIL*PCRVLLLWVLERSS Trigger: GCTTGATCGCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGAACCACCATAAAACAAGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
||
| CDS GCA 72 bp | TTTATGGTGGTTCTTACGGACATCCACACATTTTATTaGCGTGTAGGGTACTGCTGTTGTGGGTGCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FMVVLTDIHTFY*RVGYCCCGCWS Trigger: GCTCCAGCACCCACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGAACCACCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068952.10 ENSMUST00000198878.2 |
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