Pregenerated sensors for WIPI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041895Ensembl transcript IDs: ENSMUST00000047186.10, ENSMUST00000103060.10, ENSMUST00000106689.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCTAAGGAGGCCCTGACAGTCTCCAGCTCCTGCCACCCACCCTaGCTTTATCCATGCGGTTTCCTGGTGGGCAGCTGCAGCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: GAKEALTVSSSCHPP*LYPCGFLVGSCSCW Trigger: CCAGCAGCTGCAGCTGCCCACCAGGAAACCGCATGGATAAAGCCAGGGTGGGTGGCAGGAGCTGGAGACTGTCAGGGCCTCCTTAGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR GCA 90 bp | CTGCTGGGGAGGCTCAAGAGTTCGGTACCAGAGCTGCAGGTGGGTTaGAAGTCAGTTCCTGCAGCCAGCCCAGAGTCCCAGACAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: LLGRLKSSVPELQVG*KSVPAASPESQTRP Trigger: GGGTCTTGTCTGGGACTCTGGGCTGGCTGCAGGAACTGACTTGCAACCCACCTGCAGCTCTGGTACCGAACTCTTGAGCCTCCCCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR CCA 90 bp | TGCAGCTGCTGGGGAGGCTCAAGAGTTCGGTACCAGAGCTGCAGGTaGGTTGCAAGTCAGTTCCTGCAGCCAGCCCAGAGTCCCAGACAA | + |
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Preference number: 1 (lower is better) Translates to: CSCWGGSRVRYQSCR*VASQFLQPAQSPRQ Trigger: TTGTCTGGGACTCTGGGCTGGCTGCAGGAACTGACTTGCAACCCACCTGCAGCTCTGGTACCGAACTCTTGAGCCTCCCCAGCAGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 90 bp | TTAGCATTTACACTGTGGTTTGAAGGTCTTTTAGACTGCATGGTGTaGCTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCTGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LAFTLWFEGLLDCMV*LQHSPCPLAVKAEG Trigger: CCCCTCAGCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCATGCAGTCTAAAAGACCTTCAAACCACAGTGTAAATGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR TCA 90 bp | TGTAGTTCAGATGACCCTTGCTTCCAAGTACTGGAATTCCAGGTGTaGACCACTATGCTCAATTGTAAGTGCTGCTGGGAACCGAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: CSSDDPCFQVLEFQV*TTMLNCKCCWEPKL Trigger: TAGCTTCGGTTCCCAGCAGCACTTACAATTGAGCATAGTGGTTCACACCTGGAATTCCAGTACTTGGAAGCAAGGGTCATCTGAACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 90 bp | TCTGGTTACATACCAATATGGTTAGTTAGCATTTACACTGTGGTTTaGAGGTCTTTTAGACTGCATGGTGTGACTCCAGCATTCCCCTTG | + |
|
Preference number: 1 (lower is better) Translates to: SGYIPIWLVSIYTVV*RSFRLHGVTPAFPL Trigger: CAAGGGGAATGCTGGAGTCACACCATGCAGTCTAAAAGACCTTCAAACCACAGTGTAAATGCTAACTAACCATATTGGTATGTAACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR GCA 90 bp | AAAGAACTCCTCCTTTCCACCATTAGTATACAACTGTCACTTGCTTaGAATGTATTTGGCAACTTGCCTAGGAAAGCCCAAAAATGTTCA | + |
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Preference number: 1 (lower is better) Translates to: KELLLSTISIQLSLA*NVFGNLPRKAQKCS Trigger: TGAACATTTTTGGGCTTTCCTAGGCAAGTTGCCAAATACATTGCAAGCAAGTGACAGTTGTATACTAATGGTGGAAAGGAGGAGTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR CAA 90 bp | GCTGCTGGGGAGGCTCAAGAGTTCGGTACCAGAGCTGCAGGTGGGTaGCAAGTCAGTTCCTGCAGCCAGCCCAGAGTCCCAGACAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: AAGEAQEFGTRAAGG*QVSSCSQPRVPDKT Trigger: GGTCTTGTCTGGGACTCTGGGCTGGCTGCAGGAACTGACTTGCAACCCACCTGCAGCTCTGGTACCGAACTCTTGAGCCTCCCCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CCA 90 bp | GGCGCTTTGGGAAACCAGACACAGGCAGAAACTCTGACCTCACAGGGAACTAAGCGCGGGGCAGACACTTaGCCTCTTCTGGGAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GALGNQTQAETLTSQGTKRGADT*PLLGGK Trigger: CTTGCCTCCCAGAAGAGGCCAAGTGTCTGCCCCGCG...CTTAGTTCCCTGTGAGGTCAGAGTTTCTGCCTGTGTCTGGTTTCCCAAAGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR GCA 90 bp | TTTAGACTGCATGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCGCCCACAGCATTGACTaGAGTGAGGCACCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: FRLHGVTPAFPLPTGSQGAHSID*SEAPRT Trigger: AGTCCTGGGTGCCTCACTGCAGTCAATGCTGTGGGC...GCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCATGCAGTCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR-3UTR GCA 90 bp | AGGATAGGACGCTCTGGTCATATCTGTCCCCACGGTCTGACCGAGAGTGCCCAGCAACTGTCACTTGCTTaGAATGTATTTGGCAACTTG | + |
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Preference number: 2 (lower is better) Translates to: RIGRSGHICPHGLTESAQQLSLA*NVFGNL Trigger: CAAGTTGCCAAATACATTGCAAGCAAGTGACAGTTG...CTGGGCACTCTCGGTCAGACCGTGGGGACAGATATGACCAGAGCGTCCTATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGAACTCCTCCTTTCCACCATTAGTATACAACTGTCACTTGCTTGCAATGGTGGGCAGCTGCAGCTaGTGGGGAGGCTCAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LKNSSFPPLVYNCHLLAMVGSCS*WGGSRV Trigger: AACTCTTGAGCCTCCCCAGCAGCTGCAGCTGCCCAC...CATTGCAAGCAAGTGACAGTTGTATACTAATGGTGGAAAGGAGGAGTTCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CCA 90 bp | CTAACAAGTAACAGGCAGCATTCTACAAAAGCAATCTTAGGCGCTTTGGGAAACACACTTGGCCTCTTCTaGGAGGCAAGGCTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LTSNRQHSTKAILGALGNTLGLF*EARLPS Trigger: GGAAGGAAGCCTTGCCTCCCAGAAGAGGCCAAGTGT...GTTTCCCAAAGCGCCTAAGATTGCTTTTGTAGAATGCTGCCTGTTACTTGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGAGACAAGGCCTTATATATATAATTCAGGCTGGCCTTGAACTCACTATGCATGCGGTTTCCTGGTaGGCAGCTGCAGCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: FLRQGLIYIIQAGLELTMHAVSW*AAAAAG Trigger: CCCAGCAGCTGCAGCTGCCCACCAGGAAACCGCATG...CATAGTGAGTTCAAGGCCAGCCTGAATTATATATATAAGGCCTTGTCTCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CCA 90 bp | CTTTATATGTTAGTTTTCTCTAACATGGGGCTACCTCCTACCTGCCAATGTTCAATCCATGCGGTTTCCTaGTGGGCAGCTGCAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LYMLVFSNMGLPPTCQCSIHAVS*WAAAAA Trigger: AGCAGCTGCAGCTGCCCACCAGGAAACCGCATGGAT...TGAACATTGGCAGGTAGGAGGTAGCCCCATGTTAGAGAAAACTAACATATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGAGACAAGGCCTTATATATATAATTCAGGCTGGCCTTGAACTCACTATGCACTGGGATGTTTCCTaGCGGAGATACACAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: FLRQGLIYIIQAGLELTMHWDVS*RRYTGG Trigger: GCCTCCTGTGTATCTCCGTCAGGAAACATCCCAGTG...CATAGTGAGTTCAAGGCCAGCCTGAATTATATATATAAGGCCTTGTCTCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGAGACAAGGCCTTATATATATAATTCAGGCTGGCCTTGAACTCACTATGCACAGGCAGAAACTCTaGCCTCACAGGGAACTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: FLRQGLIYIIQAGLELTMHRQKL*PHRELR Trigger: CCTTAGTTCCCTGTGAGGTCAGAGTTTCTGCCTGTG...CATAGTGAGTTCAAGGCCAGCCTGAATTATATATATAAGGCCTTGTCTCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTAGCCCAGACAAAAATTCTAAATGCAGCTCAAGTGAACTTTCACAAATTACAGTCTCCAGCTCCTaGCACCCACCCTGGCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: ISSPDKNSKCSSSELSQITVSSS*HPPWLY Trigger: ATAAAGCCAGGGTGGGTGGCAGGAGCTGGAGACTGT...AATTTGTGAAAGTTCACTTGAGCTGCATTTAGAATTTTTGTCTGGGCTAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGAACTCCTCCTTTCCACCATTAGTATACAACTGTCACTTGCTTGCAATGAAGCATTCTACCAACTaGGCCACATCCCTTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: LKNSSFPPLVYNCHLLAMKHSTN*ATSLAT Trigger: AGTGGCAAGGGATGTGGCCCAGTTGGTAGAATGCTT...CATTGCAAGCAAGTGACAGTTGTATACTAATGGTGGAAAGGAGGAGTTCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTAGCCCAGACAAAAATTCTAAATGCAGCTCAAGTGAACTTTCACAAATTGGCAGGCTCTGCGCATaGAACTCAGAGCCTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: ISSPDKNSKCSSSELSQIGRLCA*NSEPLT Trigger: TGTAAGAGGCTCTGAGTTCCATGCGCAGAGCCTGCC...AATTTGTGAAAGTTCACTTGAGCTGCATTTAGAATTTTTGTCTGGGCTAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGAACTCCTCCTTTCCACCATTAGTATACAACTGTCACTTGCTTGCAATGATGCTCAATTGTAAGTaGTGCTGGGAACCGAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LKNSSFPPLVYNCHLLAMMLNCK*CWEPKL Trigger: TAGCTTCGGTTCCCAGCAGCACTTACAATTGAGCAT...CATTGCAAGCAAGTGACAGTTGTATACTAATGGTGGAAAGGAGGAGTTCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR GCA 90 bp | ATGGAACTCAGAGCCTCTTACATGCTAGGCAAACACACCGTCATTAATCCATACATGTATTTGGCAACTTaGCTAGGAAAGCCCAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: MELRASYMLGKHTVINPYMYLAT*LGKPKN Trigger: ATTTTTGGGCTTTCCTAGGCAAGTTGCCAAATACAT...GTATGGATTAATGACGGTGTGTTTGCCTAGCATGTAAGAGGCTCTGAGTTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGAACTCCTCCTTTCCACCATTAGTATACAACTGTCACTTGCTTGCAATGAGTTCAGATGACCCTTaGTTCCAAGTACTGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: LKNSSFPPLVYNCHLLAMSSDDP*FQVLEF Trigger: GAATTCCAGTACTTGGAAGCAAGGGTCATCTGAACT...CATTGCAAGCAAGTGACAGTTGTATACTAATGGTGGAAAGGAGGAGTTCTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR CAA 90 bp | ACCATTAGTATACAACTGTCACTTGCTTGCAATGTATTTGGCAACTaGCCTAGGAAAGCCCAAAAATGTTCATTTCAAACTGTAATCTAC | + |
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Preference number: 2 (lower is better) Translates to: TISIQLSLACNVFGN*PRKAQKCSFQTVIY Trigger: GTAGATTACAGTTTGAAATGAACATTTTTGGGCTTTCCTAGGCAAGTTGCCAAATACATTGCAAGCAAGTGACAGTTGTATACTAATGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR GCA 72 bp | ATGGGAGCTAAGGAGGCCCTGACAGTCTCCAGCTCCTaGCACCCACCCTGGCTTTATCCATGCGGTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: MGAKEALTVSSS*HPPWLYPCGFL Trigger: CAGGAAACCGCATGGATAAAGCCAGGGTGGGTGGCAGGAGCTGGAGACTGTCAGGGCCTCCTTAGCTCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CAA 90 bp | AGCATCATGGGAGCCCAAAGGCAACTGTTAGGCAGGGGGCCAACGGCTGTCTTAACTGGGCCACATCCCTaGCCACTGGGATGTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SIMGAQRQLLGRGPTAVLTGPHP*PLGCFL Trigger: CAGGAAACATCCCAGTGGCAAGGGATGTGGCCCAGT...TAAGACAGCCGTTGGCCCCCTGCCTAACAGTTGCCTTTGGGCTCCCATGATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 72 bp | CTACACTGTAGATGTGGATGGGAGCTAAGGAGGCCCTaGCAGTCTCCAGCTCCTGCCACCCACCCTGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LHCRCGWELRRP*QSPAPATHPGF Trigger: AAAGCCAGGGTGGGTGGCAGGAGCTGGAGACTGTCAGGGCCTCCTTAGCTCCCATCCACATCTACAGTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR GCA 72 bp | TCCTGTTCCCACAAAAAGGAGCCTCACCCATCTCAGTaGCACGCCTGTCTATTCCACAGGTCCCGACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SCSHKKEPHPSQ*HACLFHRSRPG Trigger: GCCAGGTCGGGACCTGTGGAATAGACAGGCGTGGCACTGAGATGGGTGAGGCTCCTTTTTGTGGGAACAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR-3UTR CAA 90 bp | TGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCTGAGGGGCTTGCCTCTGCCCACAGCATaGACTGTATTCCGTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: WCDSSIPLAHWQSRLRGLPLPTA*TVFRFF Trigger: GAAGAAACGGAATACAGTCAATGCTGTGGGCAGAGG...CAAGCCCCTCAGCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR TCA 72 bp | CAACTGGGCCACATCCCTTGCCACTGGGATGTTTCCTaGCGGAGATACACAGGAGGCGCATACACTGCTACA | + |
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Preference number: 3 (lower is better) Translates to: QLGHIPCHWDVS*RRYTGGAYTAT Trigger: TGTAGCAGTGTATGCGCCTCCTGTGTATCTCCGTCAGGAAACATCCCAGTGGCAAGGGATGTGGCCCAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 72 bp | GTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCTaGCAGGGGAGTGTCCTGACTTCTGAGGTAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: VSSTFLVLSKTT*QGSVLTSEVGF Trigger: GAAGCCTACCTCAGAAGTCAGGACACTCCCCTGTCAGGTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR TCA 72 bp | ACACTGTGGTTTGAAGGTCTTTTAGACTGCATGGTGTaGCTCCAGCATTCCCCTTGCCCACTGGCAGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: TLWFEGLLDCMV*LQHSPCPLAVK Trigger: CTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCATGCAGTCTAAAAGACCTTCAAACCACAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR CCA 72 bp | GAGAGAGAGAGAACAGCTGGTTTGTACCCAGCTTTCTaGCAGTGTCTAGGTGAGTGTGCCTCAAGGCACATT | + |
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Preference number: 3 (lower is better) Translates to: ERERTAGLYPAF*QCLGECASRHI Trigger: AATGTGCCTTGAGGCACACTCACCTAGACACTGCCAGAAAGCTGGGTACAAACCAGCTGTTCTCTCTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 72 bp | AACGTAATTATGTGTCTGTTTAATAGGCAGGGAAAGTaGGCCATGGAGACCGAACACGCTTCCCAGCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: NVIMCLFNRQGK*AMETEHASQRL Trigger: GAGACGCTGGGAAGCGTGTTCGGTCTCCATGGCTCACTTTCCCTGCCTATTAAACAGACACATAATTACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| 3UTR TCA 72 bp | GTATGTATAGAGACAGAGGCAAGGAGTCTAGGTCTCTaGGCCATCCACACTCCCCAGGTTAGTATTTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: VCIETEARSLGL*AIHTPQVSIWL Trigger: TAACCAAATACTAACCTGGGGAGTGTGGATGGCTCAGAGACCTAGACTCCTTGCCTCTGTCTCTATACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 72 bp | GATGACCCTTGCTTCCAAGTACTGGAATTCCAGGTGTaGACCACTATGCTCAATTGTAAGTGCTGCTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: DDPCFQVLEFQV*TTMLNCKCCWE Trigger: TTCCCAGCAGCACTTACAATTGAGCATAGTGGTTCACACCTGGAATTCCAGTACTTGGAAGCAAGGGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 72 bp | TGCAAGGTCTGTTCTGACTACACTGAAGACCCCAACTaGGTTTGTGATGTATCAATCTTCTACAACAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: CKVCSDYTEDPN*VCDVSIFYNSQ Trigger: TTGGCTGTTGTAGAAGATTGATACATCACAAACTCAGTTGGGGTCTTCAGTGTAGTCAGAACAGACCTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR GCA 72 bp | CTCCTTTCCACCATTAGTATACAACTGTCACTTGCTTaGAATGTATTTGGCAACTTGCCTAGGAAAGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LLSTISIQLSLA*NVFGNLPRKAQ Trigger: TTGGGCTTTCCTAGGCAAGTTGCCAAATACATTGCAAGCAAGTGACAGTTGTATACTAATGGTGGAAAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR CCA 72 bp | CACTATGTAGTTCAGATGACCCTTGCTTCCAAGTACTaGAATTCCAGGTGTGAACCACTATGCTCAATTGTA | + |
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Preference number: 3 (lower is better) Translates to: HYVVQMTLASKY*NSRCEPLCSIV Trigger: TACAATTGAGCATAGTGGTTCACACCTGGAATTCCAGTACTTGGAAGCAAGGGTCATCTGAACTACATAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR TCA 72 bp | ATACCAATATGGTTAGTTAGCATTTACACTGTGGTTTaGAGGTCTTTTAGACTGCATGGTGTGACTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: IPIWLVSIYTVV*RSFRLHGVTPA Trigger: TGCTGGAGTCACACCATGCAGTCTAAAAGACCTTCAAACCACAGTGTAAATGCTAACTAACCATATTGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR GCA 72 bp | ATGTTAGTTTTCTCTAACATGGGGCTACCTCCTACCTaGCAATGTTCAGACTACTCTAATTCTGTAAATAAG | + |
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Preference number: 3 (lower is better) Translates to: MLVFSNMGLPPT*QCSDYSNSVNK Trigger: CTTATTTACAGAATTAGAGTAGTCTGAACATTGGCAGGTAGGAGGTAGCCCCATGTTAGAGAAAACTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CCA 90 bp | GCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCCTGTAGCCGCTCCAGGTaGAAGGCTCTTCTGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: AVYGSSREAPGTPASLPPCSRSR*KALLGG Trigger: GCCGCCCAGAAGAGCCTTCCACCTGGAGCGGCTACA...GGGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CCA 90 bp | GCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCCCTACAACCAGGCTGCTaGAGAAGAGGCGCTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: AVYGSSREAPGTPASLPPLQPGC*RRGAPR Trigger: TCGTGGAGCGCCTCTTCTCCAGCAGCCTGGTTGTAG...GGGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CCA 90 bp | GCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCCGCGAAAGCCCTGTCCTaGTTCATCATGTCCGACACC | + |
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Preference number: 4 (lower is better) Translates to: AVYGSSREAPGTPASLPPAKALS*FIMSDT Trigger: GGTGTCGGACATGATGAACCAGGACAGGGCTTTCGC...GGGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR TCA 90 bp | GCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCCCTCTTCTGTTGTTCCTaGGCTAAGCAAGCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AVYGSSREAPGTPASLPPLFCCS*AKQAVG Trigger: ACCCACAGCTTGCTTAGCTCAGGAACAACAGAAGAG...GGGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR GCA 90 bp | ATGGGAGCTAAGGAGGCCCTGACAGTCTCCAGCTCCTGCCACCCACCCTGGCTTCCACTACAACCAGGCTaGTGGAGAAGAGGCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: MGAKEALTVSSSCHPPWLPLQPG*WRRGAP Trigger: TGGAGCGCCTCTTCTCCAGCAGCCTGGTTGTAGTGG...AAGCCAGGGTGGGTGGCAGGAGCTGGAGACTGTCAGGGCCTCCTTAGCTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR GCA 90 bp | TGCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCTCCATCTTGAAGATGTaGACGGTCTCCGTGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CGLWLKQGGTRDSCLPPSSILKM*TVSVLL Trigger: CAGCAACACGGAGACCGTGCACATCTTCAAGATGGA...GGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CCA 90 bp | ATGGGAGCTAAGGAGGCCCTGACAGTCTCCAGCTCCTGCCACCCACCCTGGCTTCTACAACCAGGCTGCTaGAGAAGAGGCGCTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: MGAKEALTVSSSCHPPWLLQPGC*RRGAPR Trigger: TCGTGGAGCGCCTCTTCTCCAGCAGCCTGGTTGTAG...AAGCCAGGGTGGGTGGCAGGAGCTGGAGACTGTCAGGGCCTCCTTAGCTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR TCA 90 bp | AGAGCGCGGGGCAGACACTTGGCCTCTTCTGGGAGGCAAGGCTTCCTTCCAGGCGAGACCTGTTGGGTTTaGGGGAATATCCAGGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: RARGRHLASSGRQGFLPGETCWV*GNIQDG Trigger: ACCGTCCTGGATATTCCCTCAAACCCAACAGGTCTC...GCCTGGAAGGAAGCCTTGCCTCCCAGAAGAGGCCAAGTGTCTGCCCCGCGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR GCA 90 bp | TGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCTGAGGGGCTTGCCACTACAACCAGGCTaGTGGAGAAGAGGCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WCDSSIPLAHWQSRLRGLPLQPG*WRRGAP Trigger: TGGAGCGCCTCTTCTCCAGCAGCCTGGTTGTAGTGG...CAAGCCCCTCAGCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR TCA 90 bp | AGAGCGCGGGGCAGACACTTGGCCTCTTCTGGGAGGCAAGGCTTCCTTCCAGGCCTCTTCTGTTGTTCCTaGGCTAAGCAAGCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RARGRHLASSGRQGFLPGLFCCS*AKQAVG Trigger: ACCCACAGCTTGCTTAGCTCAGGAACAACAGAAGAG...GCCTGGAAGGAAGCCTTGCCTCCCAGAAGAGGCCAAGTGTCTGCCCCGCGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGGCCCAGCCTCGTGGGCAGCAATaGTGCACACCGTTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPARTLLHWQQHSSRAQPRGQQ*CTPFSG Trigger: CCCTGAAAACGGTGTGCACCATTGCTGCCCACGAGG...CTGGGCCCGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGGCCCAGGGTAGGAATTCTGCCTaGCCCCGCACTTGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPARTLLHWQQHSSRAQGRNSA*PRTCLS Trigger: AGACAGGCAAGTGCGGGGCCAGGCAGAATTCCTACC...CTGGGCCCGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCTGAGGGGCTTGGAGGCACACAGGAACTaGGAGTCCATACTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: WCDSSIPLAHWQSRLRGLEAHRN*ESILNT Trigger: GGTGTTCAGTATGGACTCCCAGTTCCTGTGTGCCTC...CAAGCCCCTCAGCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR TCA 90 bp | ATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGGCCCAGGAGACCTGTTGGGTTTaGGGGAATATCCAGGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILPARTLLHWQQHSSRAQETCWV*GNIQDG Trigger: ACCGTCCTGGATATTCCCTCAAACCCAACAGGTCTC...CTGGGCCCGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCACAGCATTGACTGCAGTGAGGCACCCAGGACTCCTGCCTCCCTCCCTGCAAGCTGTGGGTTTTaGTTAGGACACATTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAHSIDCSEAPRTPASLPASCGF*LGHILL Trigger: GAGGAGAATGTGTCCTAATCAAAACCCACAGCTTGC...AGGGAGGGAGGCAGGAGTCCTGGGTGCCTCACTGCAGTCAATGCTGTGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGGGTTGCAAGTCAGTTCCTGCAGCCAGCCCAGAGTCCCAGACAAGACCTCCATCTTGAAGATGTaGACGGTCTCCGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGGLQVSSCSQPRVPDKTSILKM*TVSVLL Trigger: CAGCAACACGGAGACCGTGCACATCTTCAAGATGGA...GGTCTTGTCTGGGACTCTGGGCTGGCTGCAGGAACTGACTTGCAACCCACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGGGTTGCAAGTCAGTTCCTGCAGCCAGCCCAGAGTCCCAGACAAGACCTGGACTTGGTCAAGCTaGTCCACAGAACTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGGLQVSSCSQPRVPDKTWTWSS*STELRE Trigger: TTCTCTGAGTTCTGTGGAGCAGCTTGACCAAGTCCA...GGTCTTGTCTGGGACTCTGGGCTGGCTGCAGGAACTGACTTGCAACCCACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR GCA 90 bp | CAAAACATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGCCACTACAACCAGGCTaGTGGAGAAGAGGCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNILPARTLLHWQQHSSRPLQPG*WRRGAP Trigger: TGGAGCGCCTCTTCTCCAGCAGCCTGGTTGTAGTGG...CCGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAATGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS-3UTR GCA 90 bp | AGGATAGGACGCTCTGGTCATATCTGTCCCCACGGTCTGACCGAGAGTGCCCAGAGACGTGCTGGGCCTTaGTACAGTTGCAGCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RIGRSGHICPHGLTESAQRRAGP*YSCSIR Trigger: TCTTATGCTGCAACTGTAGCAAGGCCCAGCACGTCT...CTGGGCACTCTCGGTCAGACCGTGGGGACAGATATGACCAGAGCGTCCTATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCAAAGGCAACTGTTAGGCAGGGGGCCAACGGCTGTCTTAAAACGTATAGCGAAAGCCCTGTCCTaGTTCATCATGTCCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: GAQRQLLGRGPTAVLKRIAKALS*FIMSDT Trigger: GGTGTCGGACATGATGAACCAGGACAGGGCTTTCGC...TATACGTTTTAAGACAGCCGTTGGCCCCCTGCCTAACAGTTGCCTTTGGGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR TCA 90 bp | GGAGCCCAAAGGCAACTGTTAGGCAGGGGGCCAACGGCTGTCTTAAAACGTATAGAGGTTTTGTGTGACTaGCCACTACAACCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAQRQLLGRGPTAVLKRIEVLCD*PLQPGC Trigger: GCAGCCTGGTTGTAGTGGTCAGTCACACAAAACCTC...TATACGTTTTAAGACAGCCGTTGGCCCCCTGCCTAACAGTTGCCTTTGGGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR TCA 90 bp | CCTCCCTCCCCTCTGCCCACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTGAGGTTTTGTGTGACTaGCCACTACAACCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPLPTALTVFRFFHFPEVLCD*PLQPGC Trigger: GCAGCCTGGTTGTAGTGGTCAGTCACACAAAACCTC...AGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGTGGGCAGAGGGGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTCCCCTCTGCCCACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTGAGACCTGTTGGGTTTaGGGGAATATCCAGGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSPLPTALTVFRFFHFPETCWV*GNIQDG Trigger: ACCGTCCTGGATATTCCCTCAAACCCAACAGGTCTC...AGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGTGGGCAGAGGGGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGACTGCATGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCTGGACTTGGTCAAGCTaGTCCACAGAACTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRLHGVTPAFPLPTGSQGWTWSS*STELRE Trigger: TTCTCTGAGTTCTGTGGAGCAGCTTGACCAAGTCCA...GCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCATGCAGTCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR GCA 90 bp | CAAAACATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGTCCATCTTGAAGATGTaGACGGTCTCCGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNILPARTLLHWQQHSSRSILKM*TVSVLL Trigger: CAGCAACACGGAGACCGTGCACATCTTCAAGATGGA...CCGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAATGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGACTGCATGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCGAGGTAGTTGGTAGCTaGCATGAACATCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRLHGVTPAFPLPTGSQGEVVGS*HEHLSH Trigger: ATGGGAAAGATGTTCATGGCAGCTACCAACTACCTC...GCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCATGCAGTCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR TCA 90 bp | CAGGCTGAGCAGAGAGGTAAAACTCAGGATCCCAGACCTAGATGTTGTGCTTTTGAGGTTTTGTGTGACTaGCCACTACAACCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAEQRGKTQDPRPRCCAFEVLCD*PLQPGC Trigger: GCAGCCTGGTTGTAGTGGTCAGTCACACAAAACCTC...AAAAGCACAACATCTAGGTCTGGGATCCTGAGTTTTACCTCTCTGCTCAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCCCAAAGGCAACTGTTAGGCAGGGGGCCAACGGCTGTCTTAAAACGTATAGAGGTAGTTGGTAGCTaGCATGAACATCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GAQRQLLGRGPTAVLKRIEVVGS*HEHLSH Trigger: ATGGGAAAGATGTTCATGGCAGCTACCAACTACCTC...TATACGTTTTAAGACAGCCGTTGGCCCCCTGCCTAACAGTTGCCTTTGGGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCCCTCTGCCCACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTATTTCATTGCTTCCATaGACTTGGTCAAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPLPTALTVFRFFHFPISLLP*TWSSCS Trigger: GGAGCAGCTTGACCAAGTCCATGGAAGCAATGAAAT...AGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGTGGGCAGAGGGGAGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CCA 90 bp | CAAAACATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGATTTCATTGCTTCCATaGACTTGGTCAAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QNILPARTLLHWQQHSSRISLLP*TWSSCS Trigger: GGAGCAGCTTGACCAAGTCCATGGAAGCAATGAAAT...CCGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAATGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS-3UTR CCA 90 bp | ACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCCTCGTGGGCAGCAATaGTGCACACCGTTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TALTVFRFFHFPRSLQNHPRGQQ*CTPFSG Trigger: CCCTGAAAACGGTGTGCACCATTGCTGCCCACGAGG...GTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CCA 90 bp | TCAAAGCAGGCTGAGCAGAGAGGTAAAACTCAGGATCCCAGACCTAGATGTTGTGAGGCACACAGGAACTaGGAGTCCATACTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: SKQAEQRGKTQDPRPRCCEAHRN*ESILNT Trigger: GGTGTTCAGTATGGACTCCCAGTTCCTGTGTGCCTC...ACAACATCTAGGTCTGGGATCCTGAGTTTTACCTCTCTGCTCAGCCTGCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS-3UTR CCA 90 bp | TTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCTGACAAGTTCAGGCGTCCTGTaGCGAAAGCCCTGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTVFRFFHFPRSLQNHLTSSGVL*RKPCPG Trigger: ACCAGGACAGGGCTTTCGCCACAGGACGCCTGAACT...TGTCAGGTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR CAA 72 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAACAGCTGGTTaGTACCCAGCTTTCTGGCAGTGTCTAGGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERTAG*YPAFWQCLGEC Trigger: ACACTCACCTAGACACTGCCAGAAAGCTGGGTACAAACCAGCTGTTCTCTCTCTCTCTCTCTCTCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR GCA 90 bp | CAGGCTGAGCAGAGAGGTAAAACTCAGGATCCCAGACCTAGATGTTGTGCTTTTTGGACTTGGTCAAGCTaGTCCACAGAACTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAEQRGKTQDPRPRCCAFWTWSS*STELRE Trigger: TTCTCTGAGTTCTGTGGAGCAGCTTGACCAAGTCCA...AAAAGCACAACATCTAGGTCTGGGATCCTGAGTTTTACCTCTCTGCTCAGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS-3UTR GCA 90 bp | TTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCTGACAGGATCGTGGACAGGGTaGAAATGTTCTTCTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTVFRFFHFPRSLQNHLTGSWTG*KCSSAQ Trigger: CTGGGCAGAAGAACATTTGCACCCTGTCCACGATCC...TGTCAGGTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR GCA 90 bp | TTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCTGACAAGGACTGCTTCGTTTTaGCCTTCTGACTTCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTVFRFFHFPRSLQNHLTRTASF*PSDFHG Trigger: GCCGTGGAAGTCAGAAGGGCAAAACGAAGCAGTCCT...TGTCAGGTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CCA 90 bp | CTTTATATGTTAGTTTTCTCTAACATGGGGCTACCTCCTACCTGCCAATGTTCACCTCGTGGGCAGCAATaGTGCACACCGTTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYMLVFSNMGLPPTCQCSPRGQQ*CTPFSG Trigger: CCCTGAAAACGGTGTGCACCATTGCTGCCCACGAGG...TGAACATTGGCAGGTAGGAGGTAGCCCCATGTTAGAGAAAACTAACATATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CCA 90 bp | TTTTTGAGACAAGGCCTTATATATATAATTCAGGCTGGCCTTGAACTCACTATGTGTAGCCGCTCCAGGTaGAAGGCTCTTCTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRQGLIYIIQAGLELTMCSRSR*KALLGG Trigger: GCCGCCCAGAAGAGCCTTCCACCTGGAGCGGCTACA...CATAGTGAGTTCAAGGCCAGCCTGAATTATATATATAAGGCCTTGTCTCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGCCTCTTACATGCTAGGCAAACACACCGTCATTAATCCATACCCATCAGCAAGCTGTGGGTTTTaGTTAGGACACATTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRASYMLGKHTVINPYPSASCGF*LGHILL Trigger: GAGGAGAATGTGTCCTAATCAAAACCCACAGCTTGC...TGATGGGTATGGATTAATGACGGTGTGTTTGCCTAGCATGTAAGAGGCTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR GCA 90 bp | ACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACAGACGTGCTGGGCCTTaGTACAGTTGCAGCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TALTVFRFFHFPRSLQNHRRAGP*YSCSIR Trigger: TCTTATGCTGCAACTGTAGCAAGGCCCAGCACGTCT...GTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| 3UTR CAA 72 bp | AACAGGCAGCATTCTACAAAAGCAATCTTAGGCGCTTaGGGAAACCAGACACAGGCAGAAACTCTGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQHSTKAILGA*GNQTQAETLTS Trigger: TGAGGTCAGAGTTTCTGCCTGTGTCTGGTTTCCCAAAGCGCCTAAGATTGCTTTTGTAGAATGCTGCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACTTCGTTTTGCCCTTCTaGCTTCCACGGCACAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TALTVFRFFHFPRSLQNHFVLPF*LPRHKI Trigger: AATCTTGTGCCGTGGAAGTCAGAAGGGCAAAACGAA...GTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGCCTCTTACATGCTAGGCAAACACACCGTCATTAATCCATACCCATCACGTCAGGGATTTCATTaGTTCCATGGACTTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRASYMLGKHTVINPYPSRQGFH*FHGLGQ Trigger: TTGACCAAGTCCATGGAAGCAATGAAATCCCTGACG...TGATGGGTATGGATTAATGACGGTGTGTTTGCCTAGCATGTAAGAGGCTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGAGACAAGGCCTTATATATATAATTCAGGCTGGCCTTGAACTCACTATGAGTTCAGGCGTCCTGTaGCGAAAGCCCTGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLRQGLIYIIQAGLELTMSSGVL*RKPCPG Trigger: ACCAGGACAGGGCTTTCGCCACAGGACGCCTGAACT...CATAGTGAGTTCAAGGCCAGCCTGAATTATATATATAAGGCCTTGTCTCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGCCTCTTACATGCTAGGCAAACACACCGTCATTAATCCATACCCATCATCTCAGTGCCTTTCTTaGAATGGTAGACGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRASYMLGKHTVINPYPSSQCLS*NGRRSS Trigger: AGATGAACGTCTACCATTTCAAGAAAGGCACTGAGA...TGATGGGTATGGATTAATGACGGTGTGTTTGCCTAGCATGTAAGAGGCTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR GCA 90 bp | TTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCTGACACGTCAGGGATTTCATTaGTTCCATGGACTTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTVFRFFHFPRSLQNHLTRQGFH*FHGLGQ Trigger: TTGACCAAGTCCATGGAAGCAATGAAATCCCTGACG...TGTCAGGTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR CCA 90 bp | ACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACTTCTCCTCCATCCTGTaGGTCCAAGTTGTAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TALTVFRFFHFPRSLQNHFSSIL*VQVVDV Trigger: TACATCTACAACTTGGACCCACAGGATGGAGGAGAA...GTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCATTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACTCTCAGTGCCTTTCTTaGAATGGTAGACGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TALTVFRFFHFPRSLQNHSQCLS*NGRRSS Trigger: AGATGAACGTCTACCATTTCAAGAAAGGCACTGAGA...GTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAATGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR TCA 90 bp | TTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCTGACAGAGGTAAGGAAGGTCTaGGGTCATTTTCTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTVFRFFHFPRSLQNHLTEVRKV*GHFLCS Trigger: AGAACAAAGAAAATGACCTCAGACCTTCCTTACCTC...TGTCAGGTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR GCA 90 bp | CCAACTGAGTTTGTGATGTATCAATCTTCTACAACAGCCAAAGGATTTTACCAAGGATCGTGGACAGGGTaGAAATGTTCTTCTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTEFVMYQSSTTAKGFYQGSWTG*KCSSAQ Trigger: CTGGGCAGAAGAACATTTGCACCCTGTCCACGATCC...TTGGTAAAATCCTTTGGCTGTTGTAGAAGATTGATACATCACAAACTCAGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR CCA 90 bp | CTTTATATGTTAGTTTTCTCTAACATGGGGCTACCTCCTACCTGCCAATGTTCAATTTCATTGCTTCCATaGACTTGGTCAAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYMLVFSNMGLPPTCQCSISLLP*TWSSCS Trigger: GGAGCAGCTTGACCAAGTCCATGGAAGCAATGAAAT...TGAACATTGGCAGGTAGGAGGTAGCCCCATGTTAGAGAAAACTAACATATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTAGCCCAGACAAAAATTCTAAATGCAGCTCAAGTGAACTTTCACAAATTGAGGCACACAGGAACTaGGAGTCCATACTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ISSPDKNSKCSSSELSQIEAHRN*ESILNT Trigger: GGTGTTCAGTATGGACTCCCAGTTCCTGTGTGCCTC...AATTTGTGAAAGTTCACTTGAGCTGCATTTAGAATTTTTGTCTGGGCTAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CCA 90 bp | CTTTATATGTTAGTTTTCTCTAACATGGGGCTACCTCCTACCTGCCAATGTTCATTCTCCTCCATCCTGTaGGTCCAAGTTGTAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LYMLVFSNMGLPPTCQCSFSSIL*VQVVDV Trigger: TACATCTACAACTTGGACCCACAGGATGGAGGAGAA...TGAACATTGGCAGGTAGGAGGTAGCCCCATGTTAGAGAAAACTAACATATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR CAA 72 bp | AACTCCTCCTTTCCACCATTAGTATACAACTGTCACTaGCTTGCAATGTATTTGGCAACTTGCCTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSFPPLVYNCH*LAMYLATCLGK Trigger: CTTTCCTAGGCAAGTTGCCAAATACATTGCAAGCAAGTGACAGTTGTATACTAATGGTGGAAAGGAGGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR TCA 90 bp | CTTTATATGTTAGTTTTCTCTAACATGGGGCTACCTCCTACCTGCCAATGTTCAGAGGTAAGGAAGGTCTaGGGTCATTTTCTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYMLVFSNMGLPPTCQCSEVRKV*GHFLCS Trigger: AGAACAAAGAAAATGACCTCAGACCTTCCTTACCTC...TGAACATTGGCAGGTAGGAGGTAGCCCCATGTTAGAGAAAACTAACATATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR CAA 72 bp | CCATTAGTATACAACTGTCACTTGCTTGCAATGTATTaGGCAACTTGCCTAGGAAAGCCCAAAAATGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVYNCHLLAMY*ATCLGKPKNVH Trigger: ATGAACATTTTTGGGCTTTCCTAGGCAAGTTGCCAAATACATTGCAAGCAAGTGACAGTTGTATACTAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| 3UTR CAA 72 bp | ATACAACTGTCACTTGCTTGCAATGTATTTGGCAACTaGCCTAGGAAAGCCCAAAAATGTTCATTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IQLSLACNVFGN*PRKAQKCSFQT Trigger: AGTTTGAAATGAACATTTTTGGGCTTTCCTAGGCAAGTTGCCAAATACATTGCAAGCAAGTGACAGTTGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CAA 90 bp | GCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCCAGAGACCTGTTGGGTTaGAGGGAATATCCAGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: AVYGSSREAPGTPASLPPRDLLG*REYPGR Trigger: CCGTCCTGGATATTCCCTCAAACCCAACAGGTCTCT...GGGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CAA 90 bp | GCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCCGGGCACAGAGACCTGTaGGGTTTGAGGGAATATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVYGSSREAPGTPASLPPGHRDL*GLREYP Trigger: TGGATATTCCCTCAAACCCAACAGGTCTCTGTGCCC...GGGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
||
| CDS-3UTR CAA 90 bp | GCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCCGTCAGGTGTTCCATCTaGAAGATGTGCACGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVYGSSREAPGTPASLPPVRCSI*KMCTVS Trigger: GGAGACCGTGCACATCTTCAAGATGGAACACCTGAC...GGGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS GCA 90 bp | CCCCGCCGTCCTCAGAGTATCCTGGCACCGTGGAGGCTGCAGACGTaGTGGGCCTTGCTACAGTTGCAGCATAAGATGGAGGTAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRRPQSILAPWRLQT*WALLQLQHKMEVRK Trigger: CTTCCTTACCTCCATCTTATGCTGCAACTGTAGCAAGGCCCAGCACGTCTGCAGCCTCCACGGTGCCAGGATACTCTGAGGACGGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
||
| CDS-3UTR CAA 90 bp | AGGATAGGACGCTCTGGTCATATCTGTCCCCACGGTCTGACCGAGAGTGCCCAGTGCACGGTCTCCGTGTaGCTGGAGGCACACAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RIGRSGHICPHGLTESAQCTVSV*LEAHRN Trigger: GTTCCTGTGTGCCTCCAGCAACACGGAGACCGTGCA...CTGGGCACTCTCGGTCAGACCGTGGGGACAGATATGACCAGAGCGTCCTATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CAA 90 bp | CATGGAGACCGAACACGCTTCCCAGCGTCTCACAGCTCAAAGCAGGCTGAGCAGCTTTTTCAGACGCGCTaGCTAGCTTGGAGCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGDRTRFPASHSSKQAEQLFQTR*LAWSPR Trigger: CCTCGGGCTCCAAGCTAGCAAGCGCGTCTGAAAAAG...CTGCTCAGCCTGCTTTGAGCTGTGAGACGCTGGGAAGCGTGTTCGGTCTCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS-3UTR CAA 90 bp | TGCGGTCTATGGCTCAAGCAGGGAGGCACCCGGGACTCCTGCCTCCCTCCCTCCAGCAAGCTGTGGGTTTaGATTAGGACACATTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CGLWLKQGGTRDSCLPPSSKLWV*IRTHSP Trigger: AGGAGAATGTGTCCTAATCAAAACCCACAGCTTGCT...GGAGGGAGGGAGGCAGGAGTCCCGGGTGCCTCCCTGCTTGAGCCATAGACCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS GCA 90 bp | CTGGTTCATCATGTCCGACACCTGGGCGGGGAGGTAGTTGGTAGCTaGCATGAACATCTTTCCCATGTAGCCGCTCCAGGTGGAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVHHVRHLGGEVVGS*HEHLSHVAAPGGRL Trigger: GAGCCTTCCACCTGGAGCGGCTACATGGGAAAGATGTTCATGGCAGCTACCAACTACCTCCCCGCCCAGGTGTCGGACATGATGAACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS GCA 90 bp | AACCGCGGCAGTTTCTGGATCGTGGACAGGGTGCAAATGTTCTTCTaGCCAGAGAAGTTCAGGCGTCCTGTGGCGAAAGCCCTGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRGSFWIVDRVQMFF*PEKFRRPVAKALSW Trigger: CCAGGACAGGGCTTTCGCCACAGGACGCCTGAACTTCTCTGGGCAGAAGAACATTTGCACCCTGTCCACGATCCAGAAACTGCCGCGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS CCA 90 bp | ACAGGGTGCAAATGTTCTTCTGCCCAGAGAAGTTCAGGCGTCCTGTaGCGAAAGCCCTGTCCTGGTTCATCATGTCCGACACCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGCKCSSAQRSSGVL*RKPCPGSSCPTPGR Trigger: CCGCCCAGGTGTCGGACATGATGAACCAGGACAGGGCTTTCGCCACAGGACGCCTGAACTTCTCTGGGCAGAAGAACATTTGCACCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS TCA 90 bp | AGGTGGAAGGCTCTTCTGGGCGGCTGTCTGTCAGGTGTTCCATCTTaGAGATGTGCACGGTCTCCGTGTTGCTGGAGGCACACAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: RWKALLGGCLSGVPS*RCARSPCCWRHTGT Trigger: AGTTCCTGTGTGCCTCCAGCAACACGGAGACCGTGCACATCTTCAAGATGGAACACCTGACAGACAGCCGCCCAGAAGAGCCTTCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS GCA 90 bp | GGACTACTCCTTCCGTCTGGTAGGAATTCTGCCTGGCCCCGCACTTaGCTGTCTGTCAGGTGTTCCATCTTGAAGATGTGCACGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLLPSGRNSAWPRT*LSVRCSILKMCTVS Trigger: GGAGACCGTGCACATCTTCAAGATGGAACACCTGACAGACAGGCAAGTGCGGGGCCAGGCAGAATTCCTACCAGACGGAAGGAGTAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS-3UTR CAA 90 bp | TGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCTGAGGGGCTTGATTGCTTCCATGGACTaGGTCAAGCTGCTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WCDSSIPLAHWQSRLRGLIASMD*VKLLHR Trigger: TCTGTGGAGCAGCTTGACCAAGTCCATGGAAGCAAT...CAAGCCCCTCAGCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CAA 90 bp | AGGTGGGTTGCAAGTCAGTTCCTGCAGCCAGCCCAGAGTCCCAGACAAGACCCAGGGCACAGAGACCTGTaGGGTTTGAGGGAATATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RWVASQFLQPAQSPRQDPGHRDL*GLREYP Trigger: TGGATATTCCCTCAAACCCAACAGGTCTCTGTGCCC...TGGGTCTTGTCTGGGACTCTGGGCTGGCTGCAGGAACTGACTTGCAACCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CAA 90 bp | TTTAGACTGCATGGTGTGACTCCAGCATTCCCCTTGCCCACTGGCAGTCAAGGCCTTTTTCAGACGCGCTaGCTAGCTTGGAGCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRLHGVTPAFPLPTGSQGLFQTR*LAWSPR Trigger: CCTCGGGCTCCAAGCTAGCAAGCGCGTCTGAAAAAG...GCCTTGACTGCCAGTGGGCAAGGGGAATGCTGGAGTCACACCATGCAGTCTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CAA 90 bp | ACATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGGCCCGTCAGGTGTTCCATCTaGAAGATGTGCACGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFCQHGLYYTGNNTAAGPVRCSI*KMCTVS Trigger: GGAGACCGTGCACATCTTCAAGATGGAACACCTGAC...GGGCCCGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS-3UTR CAA 90 bp | GACCGAACACGCTTCCCAGCGTCTCACAGCTCAAAGCAGGCTGAGCAGAGAGGTATTGCTTCCATGGACTaGGTCAAGCTGCTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: DRTRFPASHSSKQAEQRGIASMD*VKLLHR Trigger: TCTGTGGAGCAGCTTGACCAAGTCCATGGAAGCAAT...ACCTCTCTGCTCAGCCTGCTTTGAGCTGTGAGACGCTGGGAAGCGTGTTCGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS CCA 90 bp | CATGAACATCTTTCCCATGTAGCCGCTCCAGGTGGAAGGCTCTTCTaGGCGGCTGTCTGTCAGGTGTTCCATCTTGAAGATGTGCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: HEHLSHVAAPGGRLF*AAVCQVFHLEDVHG Trigger: ACCGTGCACATCTTCAAGATGGAACACCTGACAGACAGCCGCCCAGAAGAGCCTTCCACCTGGAGCGGCTACATGGGAAAGATGTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS-3UTR CAA 90 bp | CCAAAACATTCTGCCAGCACGGACTCTACTACACTGGCAACAACACAGCAGCCGGGGCACAGAGACCTGTaGGGTTTGAGGGAATATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKHSASTDSTTLATTQQPGHRDL*GLREYP Trigger: TGGATATTCCCTCAAACCCAACAGGTCTCTGTGCCC...CGGCTGCTGTGTTGTTGCCAGTGTAGTAGAGTCCGTGCTGGCAGAATGTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGCAGGCTGAGCAGAGAGGTAAAACTCAGGATCCCAGACCTAGATGTTGTTGCACGGTCTCCGTGTaGCTGGAGGCACACAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKQAEQRGKTQDPRPRCCCTVSV*LEAHRN Trigger: GTTCCTGTGTGCCTCCAGCAACACGGAGACCGTGCA...ACAACATCTAGGTCTGGGATCCTGAGTTTTACCTCTCTGCTCAGCCTGCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
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| CDS-3UTR CAA 90 bp | AGGATAGGACGCTCTGGTCATATCTGTCCCCACGGTCTGACCGAGAGTGCCCAGAGCAAGCTGTGGGTTTaGATTAGGACACATTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RIGRSGHICPHGLTESAQSKLWV*IRTHSP Trigger: AGGAGAATGTGTCCTAATCAAAACCCACAGCTTGCT...CTGGGCACTCTCGGTCAGACCGTGGGGACAGATATGACCAGAGCGTCCTATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CAA 90 bp | TTGACTGTATTCCGTTTCTTCCACTTTCCTCGTTCTCTCCAAAACCACCTGACATGCACGGTCTCCGTGTaGCTGGAGGCACACAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTVFRFFHFPRSLQNHLTCTVSV*LEAHRN Trigger: GTTCCTGTGTGCCTCCAGCAACACGGAGACCGTGCA...TGTCAGGTGGTTTTGGAGAGAACGAGGAAAGTGGAAGAAACGGAATACAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103060.10 |
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| CDS-3UTR CAA 90 bp | ATGGAACTCAGAGCCTCTTACATGCTAGGCAAACACACCGTCATTAATCCATACAGAGACCTGTTGGGTTaGAGGGAATATCCAGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: MELRASYMLGKHTVINPYRDLLG*REYPGR Trigger: CCGTCCTGGATATTCCCTCAAACCCAACAGGTCTCT...GTATGGATTAATGACGGTGTGTTTGCCTAGCATGTAAGAGGCTCTGAGTTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CAA 90 bp | CTTTATATGTTAGTTTTCTCTAACATGGGGCTACCTCCTACCTGCCAATGTTCACTTTTTCAGACGCGCTaGCTAGCTTGGAGCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYMLVFSNMGLPPTCQCSLFQTR*LAWSPR Trigger: CCTCGGGCTCCAAGCTAGCAAGCGCGTCTGAAAAAG...TGAACATTGGCAGGTAGGAGGTAGCCCCATGTTAGAGAAAACTAACATATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CAA 90 bp | CTAACAAGTAACAGGCAGCATTCTACAAAAGCAATCTTAGGCGCTTTGGGAAACGTCAGGTGTTCCATCTaGAAGATGTGCACGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTSNRQHSTKAILGALGNVRCSI*KMCTVS Trigger: GGAGACCGTGCACATCTTCAAGATGGAACACCTGAC...GTTTCCCAAAGCGCCTAAGATTGCTTTTGTAGAATGCTGCCTGTTACTTGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS-3UTR CAA 90 bp | CTAACAAGTAACAGGCAGCATTCTACAAAAGCAATCTTAGGCGCTTTGGGAAACATTGCTTCCATGGACTaGGTCAAGCTGCTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTSNRQHSTKAILGALGNIASMD*VKLLHR Trigger: TCTGTGGAGCAGCTTGACCAAGTCCATGGAAGCAAT...GTTTCCCAAAGCGCCTAAGATTGCTTTTGTAGAATGCTGCCTGTTACTTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047186.10 |
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| CDS CCA 72 bp | TTCCCCTCGGAGCGCCCCGCCGTCCTCAGAGTATCCTaGCACCGTGGAGGCTGCAGACGTGCTGGGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FPSERPAVLRVS*HRGGCRRAGPC Trigger: GCAAGGCCCAGCACGTCTGCAGCCTCCACGGTGCCAGGATACTCTGAGGACGGCGGGGCGCTCCGAGGGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS GCA 72 bp | CCCGCCGTCCTCAGAGTATCCTGGCACCGTGGAGGCTaGAGACGTGCTGGGCCTTGCTACAGTTGCAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: PAVLRVSWHRGG*RRAGPCYSCSI Trigger: TATGCTGCAACTGTAGCAAGGCCCAGCACGTCTGCAGCCTCCACGGTGCCAGGATACTCTGAGGACGGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS CAA 72 bp | TTTTCAGACGCGCTTGCTAGCTTGGAGCCCGAGGAGTaGAAGGTGATAGCGGCCAGCGTCCCCTCGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSDALASLEPEE*KVIAASVPSWA Trigger: TGCCCACGAGGGGACGCTGGCCGCTATCACCTTCAACTCCTCGGGCTCCAAGCTAGCAAGCGCGTCTGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
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| CDS CAA 90 bp | ACAGTGCCTTTTTCAGACGCGCTTGCTAGCTTGGAGCCCGAGGAGTaGAAGGTGATAGCGGCCAGCGTCCCCTCGTGGGCAGCAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVPFSDALASLEPEE*KVIAASVPSWAAMV Trigger: CACCATTGCTGCCCACGAGGGGACGCTGGCCGCTATCACCTTCAACTCCTCGGGCTCCAAGCTAGCAAGCGCGTCTGAAAAAGGCACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
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| CDS CAA 90 bp | GAGAACACTCGGATGACAGTGCCTTTTTCAGACGCGCTTGCTAGCTaGGAGCCCGAGGAGTTGAAGGTGATAGCGGCCAGCGTCCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ENTRMTVPFSDALAS*EPEELKVIAASVPS Trigger: CGAGGGGACGCTGGCCGCTATCACCTTCAACTCCTCGGGCTCCAAGCTAGCAAGCGCGTCTGAAAAAGGCACTGTCATCCGAGTGTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
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| CDS CAA 90 bp | CAGGTGGAAGGCTCTTCTGGGCGGCTGTCTGTCAGGTGTTCCATCTaGAAGATGTGCACGGTCTCCGTGTTGCTGGAGGCACACAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QVEGSSGRLSVRCSI*KMCTVSVLLEAHRN Trigger: GTTCCTGTGTGCCTCCAGCAACACGGAGACCGTGCACATCTTCAAGATGGAACACCTGACAGACAGCCGCCCAGAAGAGCCTTCCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
||
| CDS TCA 72 bp | GCTCTTCTGGGCGGCTGTCTGTCAGGTGTTCCATCTTaGAGATGTGCACGGTCTCCGTGTTGCTGGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALLGGCLSGVPS*RCARSPCCWRH Trigger: GTGCCTCCAGCAACACGGAGACCGTGCACATCTTCAAGATGGAACACCTGACAGACAGCCGCCCAGAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS GCA 72 bp | CATGTCCGACACCTGGGCGGGGAGGTAGTTGGTAGCTaGCATGAACATCTTTCCCATGTAGCCGCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HVRHLGGEVVGS*HEHLSHVAAPG Trigger: ACCTGGAGCGGCTACATGGGAAAGATGTTCATGGCAGCTACCAACTACCTCCCCGCCCAGGTGTCGGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS GCA 72 bp | CCTCAGAGTATCCTGGCACCGTGGAGGCTGCAGACGTaGTGGGCCTTGCTACAGTTGCAGCATAAGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PQSILAPWRLQT*WALLQLQHKME Trigger: CTCCATCTTATGCTGCAACTGTAGCAAGGCCCAGCACGTCTGCAGCCTCCACGGTGCCAGGATACTCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
||
| CDS CCA 72 bp | GAGGAGTTGAAGGTGATAGCGGCCAGCGTCCCCTCGTaGGCAGCAATGGTGCACACCGTTTTCAGGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EELKVIAASVPS*AAMVHTVFREF Trigger: AAACTCCCTGAAAACGGTGTGCACCATTGCTGCCCACGAGGGGACGCTGGCCGCTATCACCTTCAACTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
||
| CDS CAA 72 bp | GCCTTGGTTCCAATCGCTAGGGATGTGCAGTCTTGGTaGAAAGAGAAGCAGCTGAGCGCCGCCTCCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALVPIARDVQSW*KEKQLSAASTR Trigger: CCGAGTGGAGGCGGCGCTCAGCTGCTTCTCTTTCAACCAAGACTGCACATCCCTAGCGATTGGAACCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
||
| CDS CAA 72 bp | CGGATGACAGTGCCTTTTTCAGACGCGCTTGCTAGCTaGGAGCCCGAGGAGTTGAAGGTGATAGCGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RMTVPFSDALAS*EPEELKVIAAS Trigger: GCTGGCCGCTATCACCTTCAACTCCTCGGGCTCCAAGCTAGCAAGCGCGTCTGAAAAAGGCACTGTCATCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
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| CDS CAA 90 bp | AATTCTGCCTGGCCCCGCACTTGCCTGTCTGTCAGGTGTTCCATCTaGAAGATGTGCACGGTCTCCGTGTTGCTGGAGGCACACAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: NSAWPRTCLSVRCSI*KMCTVSVLLEAHRN Trigger: GTTCCTGTGTGCCTCCAGCAACACGGAGACCGTGCACATCTTCAAGATGGAACACCTGACAGACAGGCAAGTGCGGGGCCAGGCAGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106689.2 |
||
| CDS CCA 72 bp | CAGAGTATCCTGGCACCGTGGAGGCTGCAGACGTGCTaGGCCTTGCTACAGTTGCAGCATAAGATGGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QSILAPWRLQTC*ALLQLQHKMEV Trigger: TACCTCCATCTTATGCTGCAACTGTAGCAAGGCCCAGCACGTCTGCAGCCTCCACGGTGCCAGGATACTCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS CCA 72 bp | CTTTCCCATGTAGCCGCTCCAGGTGGAAGGCTCTTCTaGGCGGCTGTCTGTCAGGTGTTCCATCTTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LSHVAAPGGRLF*AAVCQVFHLED Trigger: ATCTTCAAGATGGAACACCTGACAGACAGCCGCCCAGAAGAGCCTTCCACCTGGAGCGGCTACATGGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS TCA 72 bp | AATGGTAGACGTTCATCTGCCGAGGTTTTGTGTGACTaGCCACTACAACCAGGCTGCTGGAGAAGAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: NGRRSSAEVLCD*PLQPGCWRRGA Trigger: AGCGCCTCTTCTCCAGCAGCCTGGTTGTAGTGGTCAGTCACACAAAACCTCGGCAGATGAACGTCTACCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
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| CDS CCA 72 bp | AAATGTTCTTCTGCCCAGAGAAGTTCAGGCGTCCTGTaGCGAAAGCCCTGTCCTGGTTCATCATGTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: KCSSAQRSSGVL*RKPCPGSSCPT Trigger: TGTCGGACATGATGAACCAGGACAGGGCTTTCGCCACAGGACGCCTGAACTTCTCTGGGCAGAAGAACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 |
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| CDS CCA 72 bp | TCCACGATATACACGTCAGGGATTTCATTGCTTCCATaGACTTGGTCAAGCTGCTCCACAGAACTCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: STIYTSGISLLP*TWSSCSTELRE Trigger: TTCTCTGAGTTCTGTGGAGCAGCTTGACCAAGTCCATGGAAGCAATGAAATCCCTGACGTGTATATCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
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| CDS CAA 72 bp | GATATACACGTCAGGGATTTCATTGCTTCCATGGACTaGGTCAAGCTGCTCCACAGAACTCAGAGAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: DIHVRDFIASMD*VKLLHRTQRKQ Trigger: CTGTTTTCTCTGAGTTCTGTGGAGCAGCTTGACCAAGTCCATGGAAGCAATGAAATCCCTGACGTGTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047186.10 ENSMUST00000103060.10 ENSMUST00000106689.2 |
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