Pregenerated sensors for WIPF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075284Ensembl transcript IDs: ENSMUST00000094681.11, ENSMUST00000102679.8, ENSMUST00000102680.8, ENSMUST00000141264.8, ENSMUST00000151939.2
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGATCGGACGTTCTGTAACCACAGGGCTTGCTCGCAACTCGCTTaGGCGGTGTGGTTCGTGGAAACAGGCCAGAGGCCATGTGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: EDRTFCNHRACSQLA*AVWFVETGQRPCEQ Trigger: TTGCTCACATGGCCTCTGGCCTGTTTCCACGAACCACACCGCCCAAGCGAGTTGCGAGCAAGCCCTGTGGTTACAGAACGTCCGATCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 90 bp | ACGTTCTGTAACCACAGGGCTTGCTCGCAACTCGCTTGGGCGGTGTaGTTCGTGGAAACAGGCCAGAGGCCATGTGAGCAAGAAAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: TFCNHRACSQLAWAV*FVETGQRPCEQERH Trigger: ATGCCTTTCTTGCTCACATGGCCTCTGGCCTGTTTCCACGAACCACACCGCCCAAGCGAGTTGCGAGCAAGCCCTGTGGTTACAGAACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 90 bp | GCCCTACTAGCCTTTCCTGACCTGAGGAAGGAGTTTTCTCTGGGGTaGAGGACTGAAGAGCCACAGAAGATGCGCAAGGCCAGTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: ALLAFPDLRKEFSLG*RTEEPQKMRKASDQ Trigger: CTGGTCACTGGCCTTGCGCATCTTCTGTGGCTCTTCAGTCCTCCACCCCAGAGAAAACTCCTTCCTCAGGTCAGGAAAGGCTAGTAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR GCA 90 bp | AGGACTGAAGAGCCACAGAAGATGCGCAAGGCCAGTGACCAGCAGTaGACAAGCCAGCTGGTTCTAAGCCAGGGAGTACCCACACAGTTT | + |
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Preference number: 1 (lower is better) Translates to: RTEEPQKMRKASDQQ*TSQLVLSQGVPTQF Trigger: AAACTGTGTGGGTACTCCCTGGCTTAGAACCAGCTGGCTTGTGCACTGCTGGTCACTGGCCTTGCGCATCTTCTGTGGCTCTTCAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 90 bp | CCTGATGACACAGATGTCTGTGTCTGTTTACACAGTGCAGTGGTATaGAAAAATTCCTCTACAGCTCCTGCCTATGAACAGGGAAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: PDDTDVCVCLHSAVV*KNSSTAPAYEQGKL Trigger: TAACTTTCCCTGTTCATAGGCAGGAGCTGTAGAGGAATTTTTTCATACCACTGCACTGTGTAAACAGACACAGACATCTGTGTCATCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094681.11 |
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| 3UTR GCA 90 bp | ATTAAGGACAAAGGCAGAATAAGGGTCAAAAATCTAAGGTCTCACTaGCTGCCAAACATTGTATCAAGTTCTGACTCCGTCTTGGGACAT | + |
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Preference number: 1 (lower is better) Translates to: IKDKGRIRVKNLRSH*LPNIVSSSDSVLGH Trigger: ATGTCCCAAGACGGAGTCAGAACTTGATACAATGTTTGGCAGGCAGTGAGACCTTAGATTTTTGACCCTTATTCTGCCTTTGTCCTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 90 bp | CAAAAATCTAAGGTCTCACTGCCTGCCAAACATTGTATCAAGTTCTaGCTCCGTCTTGGGACATCTCCTGAATTGCTAAAACTCAATTTG | + |
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Preference number: 1 (lower is better) Translates to: QKSKVSLPAKHCIKF*LRLGTSPELLKLNL Trigger: CAAATTGAGTTTTAGCAATTCAGGAGATGTCCCAAGACGGAGTCAGAACTTGATACAATGTTTGGCAGGCAGTGAGACCTTAGATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 90 bp | ACAGCACAAGGAAGGACCAATTCGACTTTCAGTAAAGTAGGTCATTaGGCGTCTATGAAAAGGATGTTTATCCTAGTGAATATCAGATCA | + |
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Preference number: 1 (lower is better) Translates to: TAQGRTNSTFSKVGH*ASMKRMFILVNIRS Trigger: TGATCTGATATTCACTAGGATAAACATCCTTTTCATAGACGCTCAATGACCTACTTTACTGAAAGTCGAATTGGTCCTTCCTTGTGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 90 bp | ATCTGGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTaGGGACTTAGTACCAAAAATGTAAATAGCTCATTAATAATACAA | + |
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Preference number: 1 (lower is better) Translates to: IWQCACSKYRMVTRV*GLSTKNVNSSLIIQ Trigger: TTGTATTATTAATGAGCTATTTACATTTTTGGTACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACACTGCCAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 90 bp | AATACGCTGGACCCAAAATACAAAGTTCAGGTAGGTACACATATGTaGCCATGTGCTTTAATAGACAATGGTAACATTAAACATGATTAT | + |
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Preference number: 1 (lower is better) Translates to: NTLDPKYKVQVGTHM*PCALIDNGNIKHDY Trigger: ATAATCATGTTTAATGTTACCATTGTCTATTAAAGCACATGGCCACATATGTGTACCTACCTGAACTTTGTATTTTGGGTCCAGCGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCCAACAGAAGCAGCTTTaGAGCTTGGGTAGAACGGAG | + |
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Preference number: 2 (lower is better) Translates to: PPHAGIPSSASVPPSYSLQQKQL*SLGRTE Trigger: CTCCGTTCTACCCAAGCTCCAAAGCTGCTTCTGTTG...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTGGGCGGTGTGGTTCGTaGAAACAGGCCAGAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCGRCGS*KQARGH Trigger: ATGGCCTCTGGCCTGTTTCCACGAACCACACCGCCC...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTCAACAGAAGCAGCTTTaGAGCTTGGGTAGAACGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCQQKQL*SLGRTE Trigger: CTCCGTTCTACCCAAGCTCCAAAGCTGCTTCTGTTG...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGGGTATGGGGCTCACATTATGTTTCTTTTAAGACAGCTCTGTCCTGGAGGGCGGTGTGGTTCGTaGAAACAGGCCAGAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: QTGYGAHIMFLLRQLCPGGRCGS*KQARGH Trigger: ATGGCCTCTGGCCTGTTTCCACGAACCACACCGCCC...TCCAGGACAGAGCTGTCTTAAAAGAAACATAATGTGAGCCCCATACCCTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGCCTGGCCCTTTTTGTGATCCATCCTTTAGTGGAACTTACTTGCACAGAGTGCTGAGGCCGGTGTaGACACTTGAAATCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GKPGPFCDPSFSGTYLHRVLRPV*TLEIWQ Trigger: CTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCAC...TCTGTGCAAGTAAGTTCCACTAAAGGATGGATCACAAAAAGGGCCAGGCTTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAAAACTCAATTTGCCTTTTTAGGCACAAGCTGTCCTAACTCCTGTCTTCCACTGACAGTGTGGTGCTaGGGCCGGTGTGGACACTTG | + |
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Preference number: 2 (lower is better) Translates to: AKTQFAFLGTSCPNSCLPLTVWC*GRCGHL Trigger: CAAGTGTCCACACCGGCCTCAGCACCACACTGTCAG...TGGAAGACAGGAGTTAGGACAGCTTGTGCCTAAAAAGGCAAATTGAGTTTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAAAACTCAATTTGCCTTTTTAGGCACAAGCTGTCCTAACTCCTGTCTTCCAGCCGGTGTGGACACTTaGAATCTGGCAGTGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: AKTQFAFLGTSCPNSCLPAGVDT*NLAVCL Trigger: CAAGCACACTGCCAGATTTCAAGTGTCCACACCGGC...TGGAAGACAGGAGTTAGGACAGCTTGTGCCTAAAAAGGCAAATTGAGTTTTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACAGAAGCAGCTTTaGAGCTTGGGTAGAACGGAG | + |
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Preference number: 2 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIQQKQL*SLGRTE Trigger: CTCCGTTCTACCCAAGCTCCAAAGCTGCTTCTGTTG...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACGGAAGGAGTTTTCTCTaGGGTGGAGGACTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LIHSLTFFSYLALLAFPDGRSFL*GGGLKS Trigger: GCTCTTCAGTCCTCCACCCCAGAGAAAACTCCTTCC...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGAAGACAGCTCTGTCCTaGAGCCTTCCTCAGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRKTALS*SLPQTA Trigger: GGCTGTCTGAGGAAGGCTCCAGGACAGAGCTGTCTT...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CAA 90 bp | GGCAAGCCTGGCCCTTTTTGTGATCCATCCTTTAGTGGAACTTACTaGCACAGATCCAAGACAATGATTCTCCCAAGAAATTCAACACCA | + |
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Preference number: 2 (lower is better) Translates to: GKPGPFCDPSFSGTY*HRSKTMILPRNSTP Trigger: TGGTGTTGAATTTCTTGGGAGAATCATTGTCTTGGATCTGTGCAAGTAAGTTCCACTAAAGGATGGATCACAAAAAGGGCCAGGCTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACTGGACACTTGAAATCTaGCAGTGTGCTTGTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LIHSLTFFSYLALLAFPDWTLEI*QCACSK Trigger: CTTGGAACAAGCACACTGCCAGATTTCAAGTGTCCA...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGGAGTTTTCTCTGGGGTaGAGGACTGAAGAGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: QNFSRVLNAIGSLTSKDREFSLG*RTEEPQ Trigger: CTGTGGCTCTTCAGTCCTCCACCCCAGAGAAAACTC...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTGAGGACTTAGTATCAGATGCACAGTGCTaGGTAAAATGCAATTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: GSVLVPSTEWLLECEDLVSDAQC*VKCNSF Trigger: AAAAGAATTGCATTTTACTCAGCACTGTGCATCTGA...TACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACACTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | AGACATAACAAGTCAATTCTTTTCAGATCACCAGTAAGGCACCATTGGGTTAAAGTTCCAAGTACAGAATaGTTACTCGAGTGTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: RHNKSILFRSPVRHHWVKVPSTE*LLECED Trigger: GTCCTCACACTCGAGTAACCATTCTGTACTTGGAAC...TTTAACCCAATGGTGCCTTACTGGTGATCTGAAAAGAATTGACTTGTTATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094681.11 |
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| 3UTR-3UTR GCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGACAGTTTTGTTTTCTTaGAGTGGAGTTTGCAATCCA | + |
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Preference number: 2 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRTVLFS*SGVCNP Trigger: TGGATTGCAAACTCCACTGCAAGAAAACAAAACTGT...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CCA 90 bp | AGACATAACAAGTCAATTCTTTTCAGATCACCAGTAAGGCACCATTGGGTTAAAATTTCTTTGTTCTCATaGAAGACCGACAAATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RHNKSILFRSPVRHHWVKISLFS*KTDKWW Trigger: CCACCATTTGTCGGTCTTCCATGAGAACAAAGAAAT...TTTAACCCAATGGTGCCTTACTGGTGATCTGAAAAGAATTGACTTGTTATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094681.11 |
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| 3UTR-3UTR TCA 90 bp | AGACATAACAAGTCAATTCTTTTCAGATCACCAGTAAGGCACCATTGGGTTAAAACAGATCCAAGACAATaGTTCTCCCAAGAAATTCAA | + |
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Preference number: 2 (lower is better) Translates to: RHNKSILFRSPVRHHWVKTDPRQ*FSQEIQ Trigger: TTGAATTTCTTGGGAGAATCATTGTCTTGGATCTGT...TTTAACCCAATGGTGCCTTACTGGTGATCTGAAAAGAATTGACTTGTTATGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094681.11 |
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| 3UTR CCA 72 bp | GGGCTTGCTCGCAACTCGCTTGGGCGGTGTGGTTCGTaGAAACAGGCCAGAGGCCATGTGAGCAAGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: GLARNSLGRCGS*KQARGHVSKKG Trigger: GCCTTTCTTGCTCACATGGCCTCTGGCCTGTTTCCACGAACCACACCGCCCAAGCGAGTTGCGAGCAAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR GCA 72 bp | GAGCCACAGAAGATGCGCAAGGCCAGTGACCAGCAGTaGACAAGCCAGCTGGTTCTAAGCCAGGGAGTACCC | + |
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Preference number: 3 (lower is better) Translates to: EPQKMRKASDQQ*TSQLVLSQGVP Trigger: GGGTACTCCCTGGCTTAGAACCAGCTGGCTTGTGCACTGCTGGTCACTGGCCTTGCGCATCTTCTGTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 72 bp | AACCACAGGGCTTGCTCGCAACTCGCTTGGGCGGTGTaGTTCGTGGAAACAGGCCAGAGGCCATGTGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: NHRACSQLAWAV*FVETGQRPCEQ Trigger: TTGCTCACATGGCCTCTGGCCTGTTTCCACGAACCACACCGCCCAAGCGAGTTGCGAGCAAGCCCTGTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 72 bp | ACGTTCTGTAACCACAGGGCTTGCTCGCAACTCGCTTaGGCGGTGTGGTTCGTGGAAACAGGCCAGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: TFCNHRACSQLA*AVWFVETGQRP Trigger: TGGCCTCTGGCCTGTTTCCACGAACCACACCGCCCAAGCGAGTTGCGAGCAAGCCCTGTGGTTACAGAACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 72 bp | AACTCCTGTCTTCCAGACCGTCTGACAGTGTGGTGCTaGGGCCGGTGTGGACACTTGAAATCTGGCAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: NSCLPDRLTVWC*GRCGHLKSGSV Trigger: CACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGGTCTGGAAGACAGGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 72 bp | TCCAGACCGTCTGACAGTGTGGTGCTGAGGCCGGTGTaGACACTTGAAATCTGGCAGTGTGCTTGTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SRPSDSVVLRPV*TLEIWQCACSK Trigger: CTTGGAACAAGCACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGGTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CAA 90 bp | GGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTGAGGACTTAGTAAAGCAGCTTTGGAGCTaGGGTAGAACGGAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: GSVLVPSTEWLLECEDLVKQLWS*GRTEQA Trigger: TGCCTGCTCCGTTCTACCCAAGCTCCAAAGCTGCTT...TACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 72 bp | AGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTaGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACT | + |
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Preference number: 3 (lower is better) Translates to: SVVLRPVWTLEI*QCACSKYRMVT Trigger: AGTAACCATTCTGTACTTGGAACAAGCACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGAAGCAGCTTTGGAGCTaGGGTAGAACGGAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQKQLWS*GRTEQA Trigger: TGCCTGCTCCGTTCTACCCAAGCTCCAAAGCTGCTT...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| 3UTR CCA 72 bp | GCCAGGGAGTACCCACACAGTTTTGTTTTCTTGCAGTaGAGTTTGCAATCCACTGTAAACGGGACTGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: AREYPHSFVFLQ*SLQSTVNGTVN Trigger: GTTTACAGTCCCGTTTACAGTGGATTGCAAACTCCACTGCAAGAAAACAAAACTGTGTGGGTACTCCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 72 bp | AAGGTCTCACTGCCTGCCAAACATTGTATCAAGTTCTaGCTCCGTCTTGGGACATCTCCTGAATTGCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: KVSLPAKHCIKF*LRLGTSPELLK Trigger: TTTTAGCAATTCAGGAGATGTCCCAAGACGGAGTCAGAACTTGATACAATGTTTGGCAGGCAGTGAGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR GCA 72 bp | AAAGGCAGAATAAGGGTCAAAAATCTAAGGTCTCACTaGCTGCCAAACATTGTATCAAGTTCTGACTCCGTC | + |
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Preference number: 3 (lower is better) Translates to: KGRIRVKNLRSH*LPNIVSSSDSV Trigger: GACGGAGTCAGAACTTGATACAATGTTTGGCAGGCAGTGAGACCTTAGATTTTTGACCCTTATTCTGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CCA 72 bp | CCTTTTATTTCTTTGTTCTCATGGAAGACCGACAAATaGTGGAGGAGAAGGGAGGAAAACTACTCTCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: PFISLFSWKTDK*WRRREENYSLK Trigger: CTTTAGAGAGTAGTTTTCCTCCCTTCTCCTCCACCATTTGTCGGTCTTCCATGAGAACAAAGAAATAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 72 bp | CCTTTAGTGGAACTTACTTGCACAGATCCAAGACAATaGTTCTCCCAAGAAATTCAACACCAATGCTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: PLVELTCTDPRQ*FSQEIQHQCFL Trigger: TAGAAAGCATTGGTGTTGAATTTCTTGGGAGAATCATTGTCTTGGATCTGTGCAAGTAAGTTCCACTAAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 72 bp | GGAAGGACCAATTCGACTTTCAGTAAAGTAGGTCATTaGGCGTCTATGAAAAGGATGTTTATCCTAGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: GRTNSTFSKVGH*ASMKRMFILVN Trigger: ATTCACTAGGATAAACATCCTTTTCATAGACGCTCAATGACCTACTTTACTGAAAGTCGAATTGGTCCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 72 bp | ATTCTTTGCAAAATGCATTCTAAACCTTCTTTATTATaGATGGCAACTTTGAGCTGTGACCCGTCCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: ILCKMHSKPSLL*MATLSCDPSLT Trigger: AGTCAGGGACGGGTCACAGCTCAAAGTTGCCATTCATAATAAAGAAGGTTTAGAATGCATTTTGCAAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR TCA 72 bp | TGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTaGGGACTTAGTACCAAAAATGTAAATAGCTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: CACSKYRMVTRV*GLSTKNVNSSL Trigger: TAATGAGCTATTTACATTTTTGGTACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| 3UTR CCA 72 bp | GACCCAAAATACAAAGTTCAGGTAGGTACACATATGTaGCCATGTGCTTTAATAGACAATGGTAACATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: DPKYKVQVGTHM*PCALIDNGNIK Trigger: TTTAATGTTACCATTGTCTATTAAAGCACATGGCCACATATGTGTACCTACCTGAACTTTGTATTTTGGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCCTCGTCGTTGGAAGCTaGAGGCAGAGGAGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPHAGIPSSASVPPSYSLLVVGS*RQRRGP Trigger: GGGCCCCCTCCTCTGCCTCCAGCTTCCAACGACGAG...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCCGGGCCACTCGGGGGTaGAAAGGGCTTGGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PPHAGIPSSASVPPSYSLRATRG*KGLGRC Trigger: ACATCTGCCAAGCCCTTTTCACCCCCGAGTGGCCCG...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCGAGGTGCAGAGGACGTaGGGGACAGGTTCCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPHAGIPSSASVPPSYSLEVQRT*GTGSAV Trigger: CACAGCGGAACCTGTCCCTCACGTCCTCTGCACCTC...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTGCCCACGGGAGGAGGTaGTGGAGGGGGCTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TPTRRDPLLSFRSSLLLSAHGRR*WRGLVI Trigger: GATGACAAGCCCCCTCCACCACCTCCTCCCGTGGGC...AGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCGGACAGGTTCCGCTGTaGCAGCCTGGGGATCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPHAGIPSSASVPPSYSLGQVPL*QPGDLV Trigger: GACGAGATCCCCAGGCTGCCACAGCGGAACCTGTCC...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTAAATGTTGGTGGCGGTaGGGGTGCTGGTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTRRDPLLSFRSSLLLSKCWWR*GCWWGR Trigger: CCTCCCCCACCAGCACCCCCACCGCCACCAACATTT...AGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTGGACAGGTTCCGCTGTaGCAGCCTGGGGATCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPTRRDPLLSFRSSLLLSGQVPL*QPGDLV Trigger: GACGAGATCCCCAGGCTGCCACAGCGGAACCTGTCC...AGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCTGGGGATCTCGTCGTTaGAAGCTGGAGGCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPHAGIPSSASVPPSYSLWGSRR*KLEAEE Trigger: CTCCTCTGCCTCCAGCTTCCAACGACGAGATCCCCA...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTTGGTGGGAGGGGGCCTaGTCTGCCTGGTGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCWWEGA*SAWWIP Trigger: AGGGATCCACCAGGCAGATCAGGCCCCCTCCCACCA...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTACCCAGGCCGCGGGGTaGAAGGCACTGGAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCTQAAG*KALEVC Trigger: GCAAACCTCCAGTGCCTTCCACCCCGCGGCCTGGGT...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCCGTTTCTGGCCAGTTTaGTGGGATACGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPHAGIPSSASVPPSYSLRFWPV*WDTSWL Trigger: CAACCAAGACGTATCCCAGCAAACTGGCCAGAAACG...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTAGCGAGTGCAAATGTTaGTGGCGGTGGGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCSECKC*WRWGCW Trigger: CCAGCACCCCCACCGCCACCAACATTTGCACTCGCT...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCGTTTCTGGCCAGTTTaGTGGGATACGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPTRRDPLLSFRSSLLLSRFWPV*WDTSWL Trigger: CAACCAAGACGTATCCCAGCAAACTGGCCAGAAACG...AGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CAGACAGGGTATGGGGCTCACATTATGTTTCTTTTAAGACAGCTCTGTCCTGGAGGGGGCCCACTCCTGTaGCCTGGGGAGGGTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTGYGAHIMFLLRQLCPGGGPLL*PGEGAG Trigger: TCCCGCACCCTCCCCAGGCCACAGGAGTGGGCCCCC...TCCAGGACAGAGCTGTCTTAAAAGAAACATAATGTGAGCCCCATACCCTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTGGCTCCCAGCCCTGCTaGGGATCCCCGGTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAAGSQPC*GSPVVQ Trigger: CTGCACAACCGGGGATCCCCAGCAGGGCTGGGAGCC...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTTGGGGATCTCGTCGTTaGAAGCTGGAGGCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCWGSRR*KLEAEE Trigger: CTCCTCTGCCTCCAGCTTCCAACGACGAGATCCCCA...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTGGGGTGAAAAGGGCTTaGCAGATGTGGCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCGVKRA*QMWLFL Trigger: GAGGAAGAGCCACATCTGCCAAGCCCTTTTCACCCC...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAGCCTGGCCCTTTTTGTGATCCATCCTTTAGTGGAACTTACTTGCACAGAGGCTCCCAGCCCTGCTaGGGATCCCCGGTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKPGPFCDPSFSGTYLHRGSQPC*GSPVVQ Trigger: CTGCACAACCGGGGATCCCCAGCAGGGCTGGGAGCC...TCTGTGCAAGTAAGTTCCACTAAAGGATGGATCACAAAAAGGGCCAGGCTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTCTCGTCGTTGGAAGCTaGAGGCAGAGGAGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAALVVGS*RQRRGP Trigger: GGGCCCCCTCCTCTGCCTCCAGCTTCCAACGACGAG...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTGAGGACTTAGTACTCCTGGATGGCAACTaGGGGGTGGCAGGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSVLVPSTEWLLECEDLVLLDGN*GVAGRA Trigger: GGCCCTGCCTGCCACCCCTCAGTTGCCATCCAGGAG...TACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACACTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGTGGAGGAGGAGGTGGTaGCTGCGAACCCAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQWRRRW*LRTQPR Trigger: CCTGGGTTGGGTTCGCAGGCACCACCTCCTCCTCCA...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGAAATGTTGGTGGCGGTaGGGGTGCTGGTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQKCWWR*GCWWGR Trigger: CCTCCCCCACCAGCACCCCCACCGCCACCAACATTT...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCTGGTTTGTCCAATATTaGGGCACTTCTGTCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPHAGIPSSASVPPSYSLWFVQY*GTSVIG Trigger: ACCAATGACAGAAGTGCCCCAATATTGGACAAACCA...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGGGGGGCCCACTCCTGTaGCCTGGGGAGGGTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQGGPLL*PGEGAG Trigger: TCCCGCACCCTCCCCAGGCCACAGGAGTGGGCCCCC...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAAGGCTCCCAGCCCTGCTaGGGATCCCCGGTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQGSQPC*GSPVVQ Trigger: CTGCACAACCGGGGATCCCCAGCAGGGCTGGGAGCC...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGGGACAGGTTCCGCTGTaGCAGCCTGGGGATCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQGQVPL*QPGDLV Trigger: GACGAGATCCCCAGGCTGCCACAGCGGAACCTGTCC...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATATGGTGGGAGGGGGCCTaGTCTGCCTGGTGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIWWEGA*SAWWIP Trigger: AGGGATCCACCAGGCAGATCAGGCCCCCTCCCACCA...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGGGCTCTTCCTCCCGGTaGCAAAATCGGTGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQGSSSR*QNRWSA Trigger: AGCCGACCACCGATTTTGCCACCGGGAGGAAGAGCC...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTCATTCTGTTCCTGGGTaGCTCTGGGGGCCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAAHSVPG*LWGPTP Trigger: AGGAGTGGGCCCCCAGAGCCACCCAGGAACAGAATG...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAAGCCCACGGGAGGAGGTaGTGGAGGGGGCTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQAHGRR*WRGLVI Trigger: GATGACAAGCCCCCTCCACCACCTCCTCCCGTGGGC...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACTCGTCGTTGGAAGCTaGAGGCAGAGGAGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MSDPGRLQLIQAIAQEYILVVGS*RQRRGP Trigger: GGGCCCCCTCCTCTGCCTCCAGCTTCCAACGACGAG...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTGATGGGAGGAAGGGGTaGGGCGCCCCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAADGRKG*GAPFSS Trigger: AGAAGAGAAAGGGGCGCCCCACCCCTTCCTCCCATC...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGAAGGCTATCTGGTTTTaGGCCCACGTCAGGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQKAIWF*AHVRPR Trigger: CCGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTT...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTAAGGCTATCTGGTTTTaGGCCCACGTCAGGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAAKAIWF*AHVRPR Trigger: CCGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTT...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTCCTGGATGGCAACTaGGGGGTGGCAGGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQLLDGN*GVAGRA Trigger: GGCCCTGCCTGCCACCCCTCAGTTGCCATCCAGGAG...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATAGGCACCGCTTCTCTGTaGATGGAGGGCCTGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIGTASL*MEGLLP Trigger: GGGCAACAGGCCCTCCATGCACAGAGAAGCGGTGCC...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGGGGGGCCCACTCCTGTaGCCTGGGGAGGGTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRGGPLL*PGEGAG Trigger: TCCCGCACCCTCCCCAGGCCACAGGAGTGGGCCCCC...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAGCCTGGCCCTTTTTGTGATCCATCCTTTAGTGGAACTTACTTGCACAGACATTCTGTTCCTGGGTaGCTCTGGGGGCCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKPGPFCDPSFSGTYLHRHSVPG*LWGPTP Trigger: AGGAGTGGGCCCCCAGAGCCACCCAGGAACAGAATG...TCTGTGCAAGTAAGTTCCACTAAAGGATGGATCACAAAAAGGGCCAGGCTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTGAGGACTTAGTACCGCTTCTCTGTGCATaGAGGGCCTGTTGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVLVPSTEWLLECEDLVPLLCA*RACCPR Trigger: CCGTGGGCAACAGGCCCTCCATGCACAGAGAAGCGG...TACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACACTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACTGGAGGAGGAGGTGGTaGCTGCGAACCCAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSLTFFSYLALLAFPDWRRRW*LRTQPR Trigger: CCTGGGTTGGGTTCGCAGGCACCACCTCCTCCTCCA...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACAAATGTTGGTGGCGGTaGGGGTGCTGGTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSLTFFSYLALLAFPDKCWWR*GCWWGR Trigger: CCTCCCCCACCAGCACCCCCACCGCCACCAACATTT...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATAGAGTGCAAATGTTGGTaGCGGTGGGGGTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIECKCW*RWGCWW Trigger: CCACCAGCACCCCCACCGCCACCAACATTTGCACTC...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCGGTGGCAAAATCGGTaGTCGGCTTCCTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQRWQNR*SASSRI Trigger: GATTCTGGAGGAAGCCGACCACCGATTTTGCCACCG...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATTCTGTTCCTGGGTaGCTCTGGGGGCCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQHSVPG*LWGPTP Trigger: AGGAGTGGGCCCCCAGAGCCACCCAGGAACAGAATG...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | GCTAAAACTCAATTTGCCTTTTTAGGCACAAGCTGTCCTAACTCCTGTCTTCCAGCCCACGGGAGGAGGTaGTGGAGGGGGCTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AKTQFAFLGTSCPNSCLPAHGRR*WRGLVI Trigger: GATGACAAGCCCCCTCCACCACCTCCTCCCGTGGGC...TGGAAGACAGGAGTTAGGACAGCTTGTGCCTAAAAAGGCAAATTGAGTTTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGACCCAGGCCGCGGGGTaGAAGGCACTGGAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQTQAAG*KALEVC Trigger: GCAAACCTCCAGTGCCTTCCACCCCGCGGCCTGGGT...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTTGTCCATTCCACTCCTaGATGGCAACTGAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAACPFHS*MATEGW Trigger: CCACCCCTCAGTTGCCATCCAGGAGTGGAATGGACA...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGTGTCCATTCCACTCCTaGATGGCAACTGAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQCPFHS*MATEGW Trigger: CCACCCCTCAGTTGCCATCCAGGAGTGGAATGGACA...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTCTCCTGGATGGCAACTaGGGGGTGGCAGGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASLLDGN*GVAGRA Trigger: GGCCCTGCCTGCCACCCCTCAGTTGCCATCCAGGAG...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATAGAAGCCATTTCGAACTaGTGTGGAGGGTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIEAISN*CGGWGW Trigger: CCACCCCCACCCTCCACATCAGTTCGAAATGGCTTC...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAAGAAGCCATTTCGAACTaGTGTGGAGGGTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQEAISN*CGGWGW Trigger: CCACCCCCACCCTCCACATCAGTTCGAAATGGCTTC...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGGGCACCGCTTCTCTGTaGATGGAGGGCCTGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQGTASL*MEGLLP Trigger: GGGCAACAGGCCCTCCATGCACAGAGAAGCGGTGCC...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACAGCGAGTGCAAATGTTaGTGGCGGTGGGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSLTFFSYLALLAFPDSECKC*WRWGCW Trigger: CCAGCACCCCCACCGCCACCAACATTTGCACTCGCT...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTTGGTTTGTCCAATATTaGGGCACTTCTGTCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCWFVQY*GTSVIG Trigger: ACCAATGACAGAAGTGCCCCAATATTGGACAAACCA...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAATGGGGATCTCGTCGTTaGAAGCTGGAGGCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQWGSRR*KLEAEE Trigger: CTCCTCTGCCTCCAGCTTCCAACGACGAGATCCCCA...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTTGGTGGGAGGGGGCCTaGTCTGCCTGGTGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASWWEGA*SAWWIP Trigger: AGGGATCCACCAGGCAGATCAGGCCCCCTCCCACCA...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTGGAGGAGGAGGTGGTaGCTGCGAACCCAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLIQAIAQEYIQHKQLGAWRRRW*LRTQPR Trigger: CCTGGGTTGGGTTCGCAGGCACCACCTCCTCCTCCA...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAATATCCCTGTTGGCGGTaGACCTCAGCTTCGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQYPCWR*TSASAF Trigger: GAATGCCGAAGCTGAGGTCCACCGCCAACAGGGATA...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGAATCATTATCCCTGTTaGCGGTGGACCTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQNHYPC*RWTSAS Trigger: CGAAGCTGAGGTCCACCGCCAACAGGGATAATGATT...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTAATCATTATCCCTGTTaGCGGTGGACCTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAANHYPC*RWTSAS Trigger: CGAAGCTGAGGTCCACCGCCAACAGGGATAATGATT...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CAGACAGGGTATGGGGCTCACATTATGTTTCTTTTAAGACAGCTCTGTCCTGGACGGTGGCAAAATCGGTaGTCGGCTTCCTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: QTGYGAHIMFLLRQLCPGRWQNR*SASSRI Trigger: GATTCTGGAGGAAGCCGACCACCGATTTTGCCACCG...TCCAGGACAGAGCTGTCTTAAAAGAAACATAATGTGAGCCCCATACCCTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACGGTGGCAAAATCGGTaGTCGGCTTCCTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIRWQNR*SASSRI Trigger: GATTCTGGAGGAAGCCGACCACCGATTTTGCCACCG...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTCCGCTTCTCTGTGCATaGAGGGCCTGTTGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QLIQAIAQEYIQHKQLGAPLLCA*RACCPR Trigger: CCGTGGGCAACAGGCCCTCCATGCACAGAGAAGCGG...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTACCCAGGCCGCGGGGTaGAAGGCACTGGAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASTQAAG*KALEVC Trigger: GCAAACCTCCAGTGCCTTCCACCCCGCGGCCTGGGT...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGTTCTGGCCAGTTTGCTaGGATACGTCTTGGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQFWPVC*DTSWLS Trigger: CGACAACCAAGACGTATCCCAGCAAACTGGCCAGAA...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTTTCTGGCCAGTTTGCTaGGATACGTCTTGGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAAFWPVC*DTSWLS Trigger: CGACAACCAAGACGTATCCCAGCAAACTGGCCAGAA...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGTTCGGCTTTCGTTTCTaGCCAGTTTGCTGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQFGFRF*PVCWDT Trigger: CGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAA...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | GCTAAAACTCAATTTGCCTTTTTAGGCACAAGCTGTCCTAACTCCTGTCTTCCAGATGGGAGGAAGGGGTaGGGCGCCCCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKTQFAFLGTSCPNSCLPDGRKG*GAPFSS Trigger: AGAAGAGAAAGGGGCGCCCCACCCCTTCCTCCCATC...TGGAAGACAGGAGTTAGGACAGCTTGTGCCTAAAAAGGCAAATTGAGTTTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTCGGGCCACTCGGGGGTaGAAAGGGCTTGGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASRATRG*KGLGRC Trigger: ACATCTGCCAAGCCCTTTTCACCCCCGAGTGGCCCG...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGAAGGCTATCTGGTTTTaGGCCCACGTCAGGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQKAIWF*AHVRPR Trigger: CCGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTT...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGAGGTGCAGAGGACGTaGGGGACAGGTTCCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASEVQRT*GTGSAV Trigger: CACAGCGGAACCTGTCCCTCACGTCCTCTGCACCTC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTCATCTTCACACGATaGGTCTTGGAAGCCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQLIFTR*VLEAIS Trigger: CGAAATGGCTTCCAAGACTCATCGTGTGAAGATGAG...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTAGCGAGTGCAAATGTTaGTGGCGGTGGGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLIQAIAQEYIQHKQLGASECKC*WRWGCW Trigger: CCAGCACCCCCACCGCCACCAACATTTGCACTCGCT...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTGGCTCTTCCTCCCGGTaGCAAAATCGGTGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLIQAIAQEYIQHKQLGAGSSSR*QNRWSA Trigger: AGCCGACCACCGATTTTGCCACCGGGAGGAAGAGCC...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAAACTCAATTTGCCTTTTTAGGCACAAGCTGTCCTAACTCCTGTCTTCCACATTCCACTCCTGGATaGCAACTGAGGGGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKTQFAFLGTSCPNSCLPHSTPG*QLRGGR Trigger: CCTGCCACCCCTCAGTTGCCATCCAGGAGTGGAATG...TGGAAGACAGGAGTTAGGACAGCTTGTGCCTAAAAAGGCAAATTGAGTTTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACTGTCCATTCCACTCCTaGATGGCAACTGAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSLTFFSYLALLAFPDCPFHS*MATEGW Trigger: CCACCCCTCAGTTGCCATCCAGGAGTGGAATGGACA...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTCACTTCTGTCATTGGTaGCCGTCTTCTTTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAAHFCHW*PSSLAS Trigger: AGAAGCTAAAGAAGACGGTCACCAATGACAGAAGTG...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR TCA 90 bp | AGACATAACAAGTCAATTCTTTTCAGATCACCAGTAAGGCACCATTGGGTTAAAGAGGTGCAGAGGACGTaGGGGACAGGTTCCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHNKSILFRSPVRHHWVKEVQRT*GTGSAV Trigger: CACAGCGGAACCTGTCCCTCACGTCCTCTGCACCTC...TTTAACCCAATGGTGCCTTACTGGTGATCTGAAAAGAATTGACTTGTTATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094681.11 |
||
| CDS-3UTR GCA 90 bp | CAGACAGGGTATGGGGCTCACATTATGTTTCTTTTAAGACAGCTCTGTCCTGGAGCAGGGCCCGAGCTGTaGTTCCATTTCTGTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: QTGYGAHIMFLLRQLCPGAGPEL*FHFCLL Trigger: CAATAAACAGAAATGGAAGCACAGCTCGGGCCCTGC...TCCAGGACAGAGCTGTCTTAAAAGAAACATAATGTGAGCCCCATACCCTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGGAGTGCAAATGTTGGTaGCGGTGGGGGTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRECKCW*RWGCWW Trigger: CCACCAGCACCCCCACCGCCACCAACATTTGCACTC...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGTATCCCTGTTGGCGGTaGACCTCAGCTTCGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQYPCWR*TSASAF Trigger: GAATGCCGAAGCTGAGGTCCACCGCCAACAGGGATA...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGGCTCTTCCTCCCGGTaGCAAAATCGGTGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASGSSSR*QNRWSA Trigger: AGCCGACCACCGATTTTGCCACCGGGAGGAAGAGCC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGATGGGAGGAAGGGGTaGGGCGCCCCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASDGRKG*GAPFSS Trigger: AGAAGAGAAAGGGGCGCCCCACCCCTTCCTCCCATC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR TCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGAAGCCATTTCGAACTaGTGTGGAGGGTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASEAISN*CGGWGW Trigger: CCACCCCCACCCTCCACATCAGTTCGAAATGGCTTC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR GCA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGGATGGAAGTAGAATCTaGTTTCCCACTCATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VANREEGCAVFKQQQQKQDGSRI*FPTHLH Trigger: GTGAAGATGAGTGGGAAAGCAGATTCTACTTCCATC...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR GCA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTGATGGAAGTAGAATCTaGTTTCCCACTCATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKSRGGVCSFQTATTEAADGSRI*FPTHLH Trigger: GTGAAGATGAGTGGGAAAGCAGATTCTACTTCCATC...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTCATTCCACTCCTGGATaGCAACTGAGGGGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASHSTPG*QLRGGR Trigger: CCTGCCACCCCTCAGTTGCCATCCAGGAGTGGAATG...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGCATTCCACTCCTGGATaGCAACTGAGGGGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRHSTPG*QLRGGR Trigger: CCTGCCACCCCTCAGTTGCCATCCAGGAGTGGAATG...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACTTCGGCTTTCGTTTCTaGCCAGTTTGCTGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSLTFFSYLALLAFPDFGFRF*PVCWDT Trigger: CGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAA...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACCCTTTCTCTTCTGTTaGATCCACTTCGGCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQPFLFC*IHFGFR Trigger: ACGAAAGCCGAAGTGGATCCAACAGAAGAGAAAGGG...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR TCA 90 bp | CAGACAGGGTATGGGGCTCACATTATGTTTCTTTTAAGACAGCTCTGTCCTGGACACTTCTGTCATTGGTaGCCGTCTTCTTTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTGYGAHIMFLLRQLCPGHFCHW*PSSLAS Trigger: AGAAGCTAAAGAAGACGGTCACCAATGACAGAAGTG...TCCAGGACAGAGCTGTCTTAAAAGAAACATAATGTGAGCCCCATACCCTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR TCA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACACTTCTGTCATTGGTaGCCGTCTTCTTTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIHFCHW*PSSLAS Trigger: AGAAGCTAAAGAAGACGGTCACCAATGACAGAAGTG...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTTATCCCTGTTGGCGGTaGACCTCAGCTTCGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASYPCWR*TSASAF Trigger: GAATGCCGAAGCTGAGGTCCACCGCCAACAGGGATA...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGGGGTGAAAAGGGCTTaGCAGATGTGGCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASGVKRA*QMWLFL Trigger: GAGGAAGAGCCACATCTGCCAAGCCCTTTTCACCCC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTGCAGGGCCCGAGCTGTaGTTCCATTTCTGTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: QLIQAIAQEYIQHKQLGAAGPEL*FHFCLL Trigger: CAATAAACAGAAATGGAAGCACAGCTCGGGCCCTGC...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTCGTTTCTGGCCAGTTTaGTGGGATACGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLIQAIAQEYIQHKQLGARFWPV*WDTSWL Trigger: CAACCAAGACGTATCCCAGCAAACTGGCCAGAAACG...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCCCTTTCTCTTCTGTTaGATCCACTTCGGCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQPFLFC*IHFGFR Trigger: ACGAAAGCCGAAGTGGATCCAACAGAAGAGAAAGGG...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR GCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGCAGGGCCCGAGCTGTaGTTCCATTTCTGTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASAGPEL*FHFCLL Trigger: CAATAAACAGAAATGGAAGCACAGCTCGGGCCCTGC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGAATCATTATCCCTGTTaGCGGTGGACCTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRNHYPC*RWTSAS Trigger: CGAAGCTGAGGTCCACCGCCAACAGGGATAATGATT...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTTTCTGGCCAGTTTGCTaGGATACGTCTTGGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASFWPVC*DTSWLS Trigger: CGACAACCAAGACGTATCCCAGCAAACTGGCCAGAA...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| 3UTR CAA 72 bp | GAGTACCCACACAGTTTTGTTTTCTTGCAGTGGAGTTaGCAATCCACTGTAAACGGGACTGTAAACTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: EYPHSFVFLQWS*QSTVNGTVNST Trigger: AGTAGAGTTTACAGTCCCGTTTACAGTGGATTGCAAACTCCACTGCAAGAAAACAAAACTGTGTGGGTACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR TCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGCTCATCTTCACACGATaGGTCTTGGAAGCCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRLIFTR*VLEAIS Trigger: CGAAATGGCTTCCAAGACTCATCGTGTGAAGATGAG...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR TCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTCTCATCTTCACACGATaGGTCTTGGAAGCCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASLIFTR*VLEAIS Trigger: CGAAATGGCTTCCAAGACTCATCGTGTGAAGATGAG...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CCA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGCCCTTTCTCTTCTGTTaGATCCACTTCGGCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRPFLFC*IHFGFR Trigger: ACGAAAGCCGAAGTGGATCCAACAGAAGAGAAAGGG...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| 3UTR CAA 72 bp | GGCCCTTTTTGTGATCCATCCTTTAGTGGAACTTACTaGCACAGATCCAAGACAATGATTCTCCCAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GPFCDPSFSGTY*HRSKTMILPRN Trigger: ATTTCTTGGGAGAATCATTGTCTTGGATCTGTGCAAGTAAGTTCCACTAAAGGATGGATCACAAAAAGGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR GCA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGATGGAAGTAGAATCTaGTTTCCCACTCATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LIQAIAQEYIQHKQLGASDGSRI*FPTHLH Trigger: GTGAAGATGAGTGGGAAAGCAGATTCTACTTCCATC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CAA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCGAAGGCTATCTGGTTTaGAGCCCACGTCAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PPHAGIPSSASVPPSYSLEGYLV*SPRQAS Trigger: CGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTTC...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CAA 90 bp | ACCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCTGGGGATCTCGTCGTaGGAAGCTGGAGGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPTRRDPLLSFRSSLLLSLGISS*EAGGRG Trigger: TCCTCTGCCTCCAGCTTCCAACGACGAGATCCCCAG...AGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CAA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCCCAGCCTGCTCTGTCTaGTTCAAGGTGGGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPHAGIPSSASVPPSYSLPACSV*FKVGFS Trigger: TGAGAAGCCCACCTTGAACAAGACAGAGCAGGCTGG...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CAA 90 bp | CCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCGGGGCACTTCTGTCATaGGTGACCGTCTTCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPHAGIPSSASVPPSYSLGALLS*VTVFFS Trigger: GCTAAAGAAGACGGTCACCAATGACAGAAGTGCCCC...GAGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 90 bp | TCCGCCGCCTCCACCATAGCCACCAGCACTGGCGCCGGCTCCCTTTaGTTTGTCCAATATTGGGGCACTTCTGTCATTGGTGACCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAASTIATSTGAGSL*FVQYWGTSVIGDRL Trigger: AAGACGGTCACCAATGACAGAAGTGCCCCAATATTGGACAAACCAAAGGGAGCCGGCGCCAGTGCTGGTGGCTATGGTGGAGGCGGCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
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| CDS-3UTR CAA 90 bp | ACCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTGAATCATTATCCCTGTaGGCGGTGGACCTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPTRRDPLLSFRSSLLLSESLSL*AVDLSF Trigger: GAAGCTGAGGTCCACCGCCAACAGGGATAATGATTC...AGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS-3UTR CAA 90 bp | CCGTCTGACAGTGTGGTGCTGAGGCCGGTGTGGACACTTGAAATCTGGCAGTGTCTGGGGATCTCGTCGTaGGAAGCTGGAGGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSDSVVLRPVWTLEIWQCLGISS*EAGGRG Trigger: TCCTCTGCCTCCAGCTTCCAACGACGAGATCCCCAG...ACACTGCCAGATTTCAAGTGTCCACACCGGCCTCAGCACCACACTGTCAGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
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| CDS-3UTR CAA 90 bp | ACCCCCACACGCAGGGATCCCCTCCTCAGCTTCCGTTCCTCCCTCCTACTCTCTCCCCTTTCTCTTCTGTaGGATCCACTTCGGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TPTRRDPLLSFRSSLLLSPLSLL*DPLRLS Trigger: CGAAAGCCGAAGTGGATCCAACAGAAGAGAAAGGGG...AGAGAGTAGGAGGGAGGAACGGAAGCTGAGGAGGGGATCCCTGCGTGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 90 bp | AAAGGGCTTGGCAGATGTGGCTCTTCCTCCCGGTGGCAAAATCGGTaGTCGGCTTCCTCCAGAATCATTATCCCTGTTGGCGGTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLGRCGSSSRWQNR*SASSRIIIPVGGGP Trigger: AGGTCCACCGCCAACAGGGATAATGATTCTGGAGGAAGCCGACCACCGATTTTGCCACCGGGAGGAAGAGCCACATCTGCCAAGCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
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| CDS CCA 90 bp | AAATCGGTGGTCGGCTTCCTCCAGAATCATTATCCCTGTTGGCGGTaGACCTCAGCTTCGGCATTCCAGCCTGGAATAGTCCTCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSVVGFLQNHYPCWR*TSASAFQPGIVLPV Trigger: GACTGGGAGGACTATTCCAGGCTGGAATGCCGAAGCTGAGGTCCACCGCCAACAGGGATAATGATTCTGGAGGAAGCCGACCACCGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
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| CDS-3UTR CAA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTGGTGGTGGAGGGGGCTaGTCATCCAAGGCTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKSRGGVCSFQTATTEAAGGGGG*SSKARL Trigger: AAGCCGAGCCTTGGATGACAAGCCCCCTCCACCACC...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 90 bp | CTCTTCTGTTGGATCCACTTCGGCTTTCGTTTCTGGCCAGTTTGCTaGGATACGTCTTGGTTGTCGGTACGTATGGCTCTGGAGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFCWIHFGFRFWPVC*DTSWLSVRMALEAA Trigger: TGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATCCAACAGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 90 bp | ATCCACTTCGGCTTTCGTTTCTGGCCAGTTTGCTGGGATACGTCTTaGTTGTCGGTACGTATGGCTCTGGAGGCGGCAAGTCAGAAATCG | + |
|
Preference number: 5 (lower is better) Translates to: IHFGFRFWPVCWDTS*LSVRMALEAASQKS Trigger: CGATTTCTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGTGGCGCCGGCTCCCTTaGGTTTGTCCAATATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VANREEGCAVFKQQQQKQWRRLP*VCPILG Trigger: CCCCAATATTGGACAAACCAAAGGGAGCCGGCGCCA...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACTGCATGGAGGGCCTGTaGCCCACGGGAGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LIHSLTFFSYLALLAFPDCMEGL*PTGGGG Trigger: ACCACCTCCTCCCGTGGGCAACAGGCCCTCCATGCA...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS GCA 90 bp | TTTCTCTTCTGTTGGATCCACTTCGGCTTTCGTTTCTGGCCAGTTTaGTGGGATACGTCTTGGTTGTCGGTACGTATGGCTCTGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLFCWIHFGFRFWPV*WDTSWLSVRMALEA Trigger: CGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATCCAACAGAAGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 90 bp | GGCCAGTTTGCTGGGATACGTCTTGGTTGTCGGTACGTATGGCTCTaGAGGCGGCAAGTCAGAAATCGGATGGAAGTAGAATCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQFAGIRLGCRYVWL*RRQVRNRMEVESAF Trigger: GAAAGCAGATTCTACTTCCATCCGATTTCTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGTGCATGGAGGGCCTGTaGCCCACGGGAGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQCMEGL*PTGGGG Trigger: ACCACCTCCTCCCGTGGGCAACAGGCCCTCCATGCA...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS GCA 90 bp | TTCTTCCCTTTGCTGATGTCAGAGAGAAGAGCATTCCTCCCAGCCTaGTCTGTCTTGTTCAAGGTGGGCTTCTCAGTGTTAGCGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FFPLLMSERRAFLPA*SVLFKVGFSVLASA Trigger: TGCACTCGCTAACACTGAGAAGCCCACCTTGAACAAGACAGAGCAGGCTGGGAGGAATGCTCTTCTCTCTGACATCAGCAAAGGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 ENSMUST00000151939.2 |
||
| CDS CCA 90 bp | GTTTCTGGCCAGTTTGCTGGGATACGTCTTGGTTGTCGGTACGTATaGCTCTGGAGGCGGCAAGTCAGAAATCGGATGGAAGTAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VSGQFAGIRLGCRYV*LWRRQVRNRMEVES Trigger: AGATTCTACTTCCATCCGATTTCTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGGAATCATTATCCCTGTaGGCGGTGGACCTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VANREEGCAVFKQQQQKQESLSL*AVDLSF Trigger: GAAGCTGAGGTCCACCGCCAACAGGGATAATGATTC...CTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTCCCCTTTCTCTTCTGTaGGATCCACTTCGGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GKSRGGVCSFQTATTEAAPLSLL*DPLRLS Trigger: CGAAAGCCGAAGTGGATCCAACAGAAGAGAAAGGGG...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTGGTGGTGGAGGGGGCTaGTCATCCAAGGCTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLIQAIAQEYIQHKQLGAGGGGG*SSKARL Trigger: AAGCCGAGCCTTGGATGACAAGCCCCCTCCACCACC...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAATCGAGAGGAGGGGTGTGCAGTTTTCAAACAGCAACAACAGAAGCAGCTTTCCATTTCTGTTTATaGGAGGTGGTGGTGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSRGGVCSFQTATTEAAFHFCL*EVVVGG Trigger: CCCTCCCACCACCACCTCCAATAAACAGAAATGGAA...AGCTGCTTCTGTTGTTGCTGTTTGAAAACTGCACACCCCTCCTCTCGATTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CTGATACATTCTCTGACTTTCTTCTCCTATCTTGCCCTACTAGCCTTTCCTGACCCAGCCTGCTCTGTCTaGTTCAAGGTGGGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LIHSLTFFSYLALLAFPDPACSV*FKVGFS Trigger: TGAGAAGCCCACCTTGAACAAGACAGAGCAGGCTGG...GTCAGGAAAGGCTAGTAGGGCAAGATAGGAGAAGAAAGTCAGAGAATGTATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATAGGGGCACTTCTGTCATaGGTGACCGTCTTCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSDPGRLQLIQAIAQEYIGALLS*VTVFFS Trigger: GCTAAAGAAGACGGTCACCAATGACAGAAGTGCCCC...TATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAAACTCAATTTGCCTTTTTAGGCACAAGCTGTCCTAACTCCTGTCTTCCAGAAGGCTATCTGGTTTaGAGCCCACGTCAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AKTQFAFLGTSCPNSCLPEGYLV*SPRQAS Trigger: CGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTTC...TGGAAGACAGGAGTTAGGACAGCTTGTGCCTAAAAAGGCAAATTGAGTTTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGGGTGGTGGAGGGGGCTaGTCATCCAAGGCTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRGGGGG*SSKARL Trigger: AAGCCGAGCCTTGGATGACAAGCCCCCTCCACCACC...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | TCTGACCCTGGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACCCCTTTCTCTTCTGTaGGATCCACTTCGGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SDPGRLQLIQAIAQEYIQPLSLL*DPLRLS Trigger: CGAAAGCCGAAGTGGATCCAACAGAAGAGAAAGGGG...TTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCCAGGGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCCAGCCTGCTCTGTCTaGTTCAAGGTGGGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQPACSV*FKVGFS Trigger: TGAGAAGCCCACCTTGAACAAGACAGAGCAGGCTGG...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGCTGGGGATCTCGTCGTaGGAAGCTGGAGGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRLGISS*EAGGRG Trigger: TCCTCTGCCTCCAGCTTCCAACGACGAGATCCCCAG...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CAGACAGGGTATGGGGCTCACATTATGTTTCTTTTAAGACAGCTCTGTCCTGGATTCCATTTCTGTTTATaGGAGGTGGTGGTGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTGYGAHIMFLLRQLCPGFHFCL*EVVVGG Trigger: CCCTCCCACCACCACCTCCAATAAACAGAAATGGAA...TCCAGGACAGAGCTGTCTTAAAAGAAACATAATGTGAGCCCCATACCCTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAAACTCAATTTGCCTTTTTAGGCACAAGCTGTCCTAACTCCTGTCTTCCAGGGGCACTTCTGTCATaGGTGACCGTCTTCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKTQFAFLGTSCPNSCLPGALLS*VTVFFS Trigger: GCTAAAGAAGACGGTCACCAATGACAGAAGTGCCCC...TGGAAGACAGGAGTTAGGACAGCTTGTGCCTAAAAAGGCAAATTGAGTTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCTGCAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGGAATCATTATCCCTGTaGGCGGTGGACCTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLQLIQAIAQEYIQHKQESLSL*AVDLSF Trigger: GAAGCTGAGGTCCACCGCCAACAGGGATAATGATTC...CTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTGCAGCCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTGAAGGCTATCTGGTTTaGAGCCCACGTCAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LIQAIAQEYIQHKQLGASEGYLV*SPRQAS Trigger: CGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTTC...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTGAGGACTTAGTATTGGTTTGTCCAATATaGGGGCACTTCTGTCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSVLVPSTEWLLECEDLVLVCPI*GHFCHW Trigger: CCAATGACAGAAGTGCCCCAATATTGGACAAACCAA...TACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | AGACATAACAAGTCAATTCTTTTCAGATCACCAGTAAGGCACCATTGGGTTAAATGGCGCCGGCTCCCTTaGGTTTGTCCAATATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHNKSILFRSPVRHHWVKWRRLP*VCPILG Trigger: CCCCAATATTGGACAAACCAAAGGGAGCCGGCGCCA...TTTAACCCAATGGTGCCTTACTGGTGATCTGAAAAGAATTGACTTGTTATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094681.11 |
||
| CDS-3UTR CAA 90 bp | GGCAGTGTGCTTGTTCCAAGTACAGAATGGTTACTCGAGTGTGAGGACTTAGTATTTAGCTTCTTCCCTTaGCTGATGTCAGAGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSVLVPSTEWLLECEDLVFSFFP*LMSERR Trigger: TCTTCTCTCTGACATCAGCAAAGGGAAGAAGCTAAA...TACTAAGTCCTCACACTCGAGTAACCATTCTGTACTTGGAACAAGCACACTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTTCTCAAGAGTTTTAAATGCAATTGGGTCACTGACTTCCAAAGATAGGTTCCATTTCTGTTTATaGGAGGTGGTGGTGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QNFSRVLNAIGSLTSKDRFHFCL*EVVVGG Trigger: CCCTCCCACCACCACCTCCAATAAACAGAAATGGAA...CCTATCTTTGGAAGTCAGTGACCCAATTGCATTTAAAACTCTTGAGAAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094681.11 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTTGGTTTGTCCAATATaGGGGCACTTCTGTCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLIQAIAQEYIQHKQLGALVCPI*GHFCHW Trigger: CCAATGACAGAAGTGCCCCAATATTGGACAAACCAA...AGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | CTGATACAAGCAATAGCTCAGGAATATATACAACATAAACAGCTAGGCGCTTCTTTTAGCTTCTTCCCTTaGCTGATGTCAGAGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LIQAIAQEYIQHKQLGASFSFFP*LMSERR Trigger: TCTTCTCTCTGACATCAGCAAAGGGAAGAAGCTAAA...AGAAGCGCCTAGCTGTTTATGTTGTATATATTCCTGAGCTATTGCTTGTATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS-3UTR CAA 90 bp | AGACATAACAAGTCAATTCTTTTCAGATCACCAGTAAGGCACCATTGGGTTAAATTGGTTTGTCCAATATaGGGGCACTTCTGTCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHNKSILFRSPVRHHWVKLVCPI*GHFCHW Trigger: CCAATGACAGAAGTGCCCCAATATTGGACAAACCAA...TTTAACCCAATGGTGCCTTACTGGTGATCTGAAAAGAATTGACTTGTTATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094681.11 |
||
| CDS CCA 72 bp | GAGGTGGTGCCTGCGAACCCAACCCAGGCCGCGGGGTaGAAGGCACTGGAGGTTTGCTGGTCTGTGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVVPANPTQAAG*KALEVCWSVRG Trigger: CCCCCTCACAGACCAGCAAACCTCCAGTGCCTTCCACCCCGCGGCCTGGGTTGGGTTCGCAGGCACCACCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS GCA 72 bp | AGAGGAGGAGCCGGAGGGGTTCTGGCGCGCAGAGCCTaGTCCAAAAGCAGCACCTCGGTTCCCGGGAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGGAGGVLARRA*SKSSTSVPGKG Trigger: CCCTTTCCCGGGAACCGAGGTGCTGCTTTTGGAGCAGGCTCTGCGCGCCAGAACCCCTCCGGCTCCTCCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CCA 72 bp | GGCCTAGGAAACGGAGAGGAGGAGCCGGAGGGGTTCTaGCGCGCAGAGCCTGCTCCAAAAGCAGCACCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLGNGEEEPEGF*RAEPAPKAAPR Trigger: CCGAGGTGCTGCTTTTGGAGCAGGCTCTGCGCGCCAGAACCCCTCCGGCTCCTCCTCTCCGTTTCCTAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CCA 72 bp | TGGAGGTGCAGAGGACGTGAGGGACAGGTTCCGCTGTaGCAGCCTGGGGATCTCGTCGTTGGAAGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WRCRGREGQVPL*QPGDLVVGSWR Trigger: CCTCCAGCTTCCAACGACGAGATCCCCAGGCTGCCACAGCGGAACCTGTCCCTCACGTCCTCTGCACCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CAA 90 bp | CAGGTCTTGGCGTATTTGGTACCGGAGGGGGAAGGCTATCTGGTTTaGAGCCCACGTCAGGCCTCGGGGGAGGCATTCTGTTCCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVLAYLVPEGEGYLV*SPRQASGEAFCSWV Trigger: CACCCAGGAACAGAATGCCTCCCCCGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTTCCCCCTCCGGTACCAAATACGCCAAGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CCA 72 bp | GGATCCCCGGTTGTGCAGACTCGACGGAACAGGTCTTaGCGTATTTGGTACCGGAGGGGGAAGGCTATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPVVQTRRNRS*RIWYRRGKAIW Trigger: CCAGATAGCCTTCCCCCTCCGGTACCAAATACGCCAAGACCTGTTCCGTCGAGTCTGCACAACCGGGGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CAA 72 bp | GCGTATTTGGTACCGGAGGGGGAAGGCTATCTGGTTTaGAGCCCACGTCAGGCCTCGGGGGAGGCATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AYLVPEGEGYLV*SPRQASGEAFC Trigger: ACAGAATGCCTCCCCCGAGGCCTGACGTGGGCTCAAAACCAGATAGCCTTCCCCCTCCGGTACCAAATACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CAA 72 bp | GGGATCCCCGGTTGTGCAGACTCGACGGAACAGGTCTaGGCGTATTTGGTACCGGAGGGGGAAGGCTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GIPGCADSTEQV*AYLVPEGEGYL Trigger: CAGATAGCCTTCCCCCTCCGGTACCAAATACGCCAAGACCTGTTCCGTCGAGTCTGCACAACCGGGGATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CCA 72 bp | TCGGTGGTCGGCTTCCTCCAGAATCATTATCCCTGTTaGCGGTGGACCTCAGCTTCGGCATTCCAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVVGFLQNHYPC*RWTSASAFQPG Trigger: TCCAGGCTGGAATGCCGAAGCTGAGGTCCACCGCCAACAGGGATAATGATTCTGGAGGAAGCCGACCACCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CAA 72 bp | ATCGGTGGTCGGCTTCCTCCAGAATCATTATCCCTGTaGGCGGTGGACCTCAGCTTCGGCATTCCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IGGRLPPESLSL*AVDLSFGIPAW Trigger: CCAGGCTGGAATGCCGAAGCTGAGGTCCACCGCCAACAGGGATAATGATTCTGGAGGAAGCCGACCACCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CCA 72 bp | GGCAGATGTGGCTCTTCCTCCCGGTGGCAAAATCGGTaGTCGGCTTCCTCCAGAATCATTATCCCTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRCGSSSRWQNR*SASSRIIIPVG Trigger: GCCAACAGGGATAATGATTCTGGAGGAAGCCGACCACCGATTTTGCCACCGGGAGGAAGAGCCACATCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CAA 72 bp | CTCCACCATAGCCACCAGCACTGGCGCCGGCTCCCTTaGGTTTGTCCAATATTGGGGCACTTCTGTCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: LHHSHQHWRRLP*VCPILGHFCHW Trigger: CCAATGACAGAAGTGCCCCAATATTGGACAAACCAAAGGGAGCCGGCGCCAGTGCTGGTGGCTATGGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CAA 72 bp | CGGCTTTCGTTTCTGGCCAGTTTGCTGGGATACGTCTaGGTTGTCGGTACGTATGGCTCTGGAGGCGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLSFLASLLGYV*VVGTYGSGGGK Trigger: CTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CCA 72 bp | TCCACCATAGCCACCAGCACTGGCGCCGGCTCCCTTTaGTTTGTCCAATATTGGGGCACTTCTGTCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: STIATSTGAGSL*FVQYWGTSVIG Trigger: ACCAATGACAGAAGTGCCCCAATATTGGACAAACCAAAGGGAGCCGGCGCCAGTGCTGGTGGCTATGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CCA 72 bp | GTCGGCTTCCTCCAGAATCATTATCCCTGTTGGCGGTaGACCTCAGCTTCGGCATTCCAGCCTGGAATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGFLQNHYPCWR*TSASAFQPGIV Trigger: GACTATTCCAGGCTGGAATGCCGAAGCTGAGGTCCACCGCCAACAGGGATAATGATTCTGGAGGAAGCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
||
| CDS CCA 72 bp | GGCTTTCGTTTCTGGCCAGTTTGCTGGGATACGTCTTaGTTGTCGGTACGTATGGCTCTGGAGGCGGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GFRFWPVCWDTS*LSVRMALEAAS Trigger: ACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CAA 72 bp | TTTCGTTTCTGGCCAGTTTGCTGGGATACGTCTTGGTaGTCGGTACGTATGGCTCTGGAGGCGGCAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FRFWPVCWDTSW*SVRMALEAASQ Trigger: CTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
||
| CDS CAA 90 bp | CACTTCGGCTTTCGTTTCTGGCCAGTTTGCTGGGATACGTCTTGGTaGTCGGTACGTATGGCTCTGGAGGCGGCAAGTCAGAAATCGGAT | + |
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Preference number: 6 (lower is better) Translates to: HFGFRFWPVCWDTSW*SVRMALEAASQKSD Trigger: ATCCGATTTCTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CAA 90 bp | GATCCACTTCGGCTTTCGTTTCTGGCCAGTTTGCTGGGATACGTCTaGGTTGTCGGTACGTATGGCTCTGGAGGCGGCAAGTCAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: DPLRLSFLASLLGYV*VVGTYGSGGGKSEI Trigger: GATTTCTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 72 bp | GCTGGGATACGTCTTGGTTGTCGGTACGTATGGCTCTaGAGGCGGCAAGTCAGAAATCGGATGGAAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: AGIRLGCRYVWL*RRQVRNRMEVE Trigger: TTCTACTTCCATCCGATTTCTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 72 bp | CAGTTTGCTGGGATACGTCTTGGTTGTCGGTACGTATaGCTCTGGAGGCGGCAAGTCAGAAATCGGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: QFAGIRLGCRYV*LWRRQVRNRME Trigger: TTCCATCCGATTTCTGACTTGCCGCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 72 bp | TGGATCCACTTCGGCTTTCGTTTCTGGCCAGTTTGCTaGGATACGTCTTGGTTGTCGGTACGTATGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: WIHFGFRFWPVC*DTSWLSVRMAL Trigger: CAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CAA 72 bp | TCAGAGAGAAGAGCATTCCTCCCAGCCTGCTCTGTCTaGTTCAAGGTGGGCTTCTCAGTGTTAGCGAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SERRAFLPACSV*FKVGFSVLASA Trigger: TGCACTCGCTAACACTGAGAAGCCCACCTTGAACAAGACAGAGCAGGCTGGGAGGAATGCTCTTCTCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 ENSMUST00000151939.2 |
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| CDS CAA 72 bp | CTGTTGGATCCACTTCGGCTTTCGTTTCTGGCCAGTTaGCTGGGATACGTCTTGGTTGTCGGTACGTATGGC | + |
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Preference number: 6 (lower is better) Translates to: LLDPLRLSFLAS*LGYVLVVGTYG Trigger: GCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATCCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CAA 90 bp | GGGGCACTTCTGTCATTGGTGACCGTCTTCTTTAGCTTCTTCCCTTaGCTGATGTCAGAGAGAAGAGCATTCCTCCCAGCCTGCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GALLSLVTVFFSFFP*LMSERRAFLPACSV Trigger: GACAGAGCAGGCTGGGAGGAATGCTCTTCTCTCTGACATCAGCAAAGGGAAGAAGCTAAAGAAGACGGTCACCAATGACAGAAGTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 ENSMUST00000151939.2 |
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| CDS CAA 90 bp | CTTTCTCTTCTGTTGGATCCACTTCGGCTTTCGTTTCTGGCCAGTTaGCTGGGATACGTCTTGGTTGTCGGTACGTATGGCTCTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LSLLLDPLRLSFLAS*LGYVLVVGTYGSGG Trigger: GCCTCCAGAGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATCCAACAGAAGAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CAA 90 bp | GCGCCGGCTCCCTTTGGTTTGTCCAATATTGGGGCACTTCTGTCATaGGTGACCGTCTTCTTTAGCTTCTTCCCTTTGCTGATGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: APAPFGLSNIGALLS*VTVFFSFFPLLMSE Trigger: CTCTGACATCAGCAAAGGGAAGAAGCTAAAGAAGACGGTCACCAATGACAGAAGTGCCCCAATATTGGACAAACCAAAGGGAGCCGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
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| CDS GCA 72 bp | TGTTGGATCCACTTCGGCTTTCGTTTCTGGCCAGTTTaGTGGGATACGTCTTGGTTGTCGGTACGTATGGCT | + |
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Preference number: 6 (lower is better) Translates to: CWIHFGFRFWPV*WDTSWLSVRMA Trigger: AGCCATACGTACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CAA 90 bp | TTGCTGATGTCAGAGAGAAGAGCATTCCTCCCAGCCTGCTCTGTCTaGTTCAAGGTGGGCTTCTCAGTGTTAGCGAGTGCAAATGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLMSERRAFLPACSV*FKVGFSVLASANVG Trigger: ACCAACATTTGCACTCGCTAACACTGAGAAGCCCACCTTGAACAAGACAGAGCAGGCTGGGAGGAATGCTCTTCTCTCTGACATCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 ENSMUST00000151939.2 |
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| CDS GCA 72 bp | GAGGCGGCAAGTCAGAAATCGGATGGAAGTAGAATCTaGTTTCCCACTCATCTTCACACGATGAGTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: EAASQKSDGSRI*FPTHLHTMSLG Trigger: TCCAAGACTCATCGTGTGAAGATGAGTGGGAAAGCAGATTCTACTTCCATCCGATTTCTGACTTGCCGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CCA 72 bp | TTTCTCTTCTGTTGGATCCACTTCGGCTTTCGTTTCTaGCCAGTTTGCTGGGATACGTCTTGGTTGTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: FLFCWIHFGFRF*PVCWDTSWLSV Trigger: TACCGACAACCAAGACGTATCCCAGCAAACTGGCCAGAAACGAAAGCCGAAGTGGATCCAACAGAAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 |
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| CDS CAA 72 bp | CCCTTTGGTTTGTCCAATATTGGGGCACTTCTGTCATaGGTGACCGTCTTCTTTAGCTTCTTCCCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PFGLSNIGALLS*VTVFFSFFPLL Trigger: CAGCAAAGGGAAGAAGCTAAAGAAGACGGTCACCAATGACAGAAGTGCCCCAATATTGGACAAACCAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094681.11 ENSMUST00000102679.8 ENSMUST00000102680.8 ENSMUST00000141264.8 |
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