Pregenerated sensors for WIF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020218Ensembl transcript IDs: ENSMUST00000020439.11, ENSMUST00000175867.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCTGATCAACTGACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAAGAACCCGGTGTAACTTaGACCGTTTCAGATGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PDQLTQYKICPKRTEGRKEPGVT*TVSDGG Trigger: CCCACCATCTGAAACGGTTCAAGTTACACCGGGTTC...TTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGTCAGTTGATCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTGAACCCGGTGTAACTTaGACCGTTTCAGATGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLTSLTLPILRPQMCCDFEPGVT*TVSDGG Trigger: CCCACCATCTGAAACGGTTCAAGTTACACCGGGTTC...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACACTTAAACGCTGCTATTaGCTTTATCCGAAACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTLKRCY*LYPKPC Trigger: ACAAGGTTTCGGATAAAGCCAATAGCAGCGTTTAAG...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| 3UTR-3UTR CAA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACATGTAATGAACAGCATTaGAACATCCAACACGCGAAA | + |
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Preference number: 3 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTCNEQH*NIQHAK Trigger: TTTCGCGTGTTGGATGTTCAAATGCTGTTCATTACA...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGCTCCAGCCCGGCGCCTaGTGGCCTCGGGGCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVLQPGA*WPRGMH Trigger: ATGCATGCCCCGAGGCCAGCAGGCGCCGGGCTGGAG...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGCACTTGTTGGGTTCGTaGCAGGTTCCGTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVHLLGS*QVPWAP Trigger: TGGTGCCCACGGAACCTGCCACGAACCCAACAAGTG...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGGTTGGGGGCATTTGCTaGGTTCACACTGCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVVGGIC*VHTALP Trigger: AGGGAGAGCAGTGTGAACTCAGCAAATGCCCCCAAC...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGTCTTATTGCAGTGTCTaGCGTGCCAGCCCTCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVSYCSV*RASPLD Trigger: GTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGA...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACACTCCAGCCCGGCGCCTaGTGGCCTCGGGGCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTLQPGA*WPRGMH Trigger: ATGCATGCCCCGAGGCCAGCAGGCGCCGGGCTGGAG...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGAAGAAGATGGCATTCTaGGGGGTCCTAAGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVKKMAF*GVLRMV Trigger: CACCATCCTTAGGACCCCTCAGAATGCCATCTTCTT...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | CCTGATCAACTGACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAAGCCTCGGGGCATGCATaGGGCTGGCTCCATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDQLTQYKICPKRTEGRKASGHA*GWLHTS Trigger: AGAGGTATGGAGCCAGCCTCATGCATGCCCCGAGGC...TTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGTCAGTTGATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTCTCTCCTCAGGTGGCTaGCCTGCATCCGCTCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFLSSGG*PASARS Trigger: GCTGCGAGCGGATGCAGGGCAGCCACCTGAGGAGAG...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | CCTGATCAACTGACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAAGCTGGCCTCGGGGCATaGATGAGGCTGGCTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: PDQLTQYKICPKRTEGRKAGLGA*MRLAPY Trigger: GTATGGAGCCAGCCTCATGCATGCCCCGAGGCCAGC...TTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGTCAGTTGATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTTCGTGGCAGGTTCCGTaGGCACCACAGCCAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFSWQVP*APQPGS Trigger: CGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGA...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTGCCTCGGGGCATGCATaGGGCTGGCTCCATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFASGHA*GWLHTS Trigger: AGAGGTATGGAGCCAGCCTCATGCATGCCCCGAGGC...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCACTCTCCTCAGGTGGCTaGCCTGCATCCGCTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSLSSGG*PASARS Trigger: GCTGCGAGCGGATGCAGGGCAGCCACCTGAGGAGAG...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGTCATACATCGGGGTATaGACAGGGCTTTCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVSYIGV*TGLSHS Trigger: ACTGTGAGAAAGCCCTGTGCATACCCCGATGTATGA...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACAGCTGGCCTCGGGGCATaGATGAGGCTGGCTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTAGLGA*MRLAPY Trigger: GTATGGAGCCAGCCTCATGCATGCCCCGAGGCCAGC...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | CCTGATCAACTGACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAACTCGTAGAAGTATTCTaGCTGCCCCGCAGCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PDQLTQYKICPKRTEGRKLVEVF*LPRSLP Trigger: TGGCAAGCTGCGGGGCAGGCAGAATACTTCTACGAG...TTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGTCAGTTGATCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGATTGACAGTTGGATCTaGCATGATGCCTTTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVIDSWI*HDAFIQ Trigger: CTGGATAAAGGCATCATGGCAGATCCAACTGTCAAT...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACAGTTGGGGGCATTTGCTaGGTTCACACTGCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTVGGIC*VHTALP Trigger: AGGGAGAGCAGTGTGAACTCAGCAAATGCCCCCAAC...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTGCCTGCCCCGCAGCTTaGCAGGTAAAATTCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFACPAA*QVKFME Trigger: CTCCATGAATTTTACCTGGCAAGCTGCGGGGCAGGC...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACAGCCTGCCCCGCAGCTTaGCAGGTAAAATTCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTACPAA*QVKFME Trigger: CTCCATGAATTTTACCTGGCAAGCTGCGGGGCAGGC...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACATCTTATTGCAGTGTCTaGCGTGCCAGCCCTCTCGAC | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTSYCSV*RASPLD Trigger: GTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGA...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCACACTTGTTGGGTTCGTaGCAGGTTCCGTGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSHLLGS*QVPWAP Trigger: TGGTGCCCACGGAACCTGCCACGAACCCAACAAGTG...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTGACACTGGCACTTGTTaGGTTCGTGGCAGGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFDTGTC*VRGRFR Trigger: ACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTC...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACAGACACTGGCACTTGTTaGGTTCGTGGCAGGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTDTGTC*VRGRFR Trigger: ACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTC...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACACAGTTGGATCTGCCATaGTGCCTTTATCCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTQLDLP*CLYPGS Trigger: GCTCCCTGGATAAAGGCATCATGGCAGATCCAACTG...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGTGCCTTCAGAATTCATaGCAATCACATTCACTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TAFEHPTRERLTKAVNPVCLQNS*QSHSLQ Trigger: TTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCA...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACACTCAGCCTTTTTAAGTaGAGGCGTGTGTCGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTLSLFK*RRVSLQ Trigger: CTGGAGCGACACACGCCTTCACTTAAAAAGGCTGAG...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTCTCAGCCTTTTTAAGTaGAGGCGTGTGTCGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFLSLFK*RRVSLQ Trigger: CTGGAGCGACACACGCCTTCACTTAAAAAGGCTGAG...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACACCATTTCGGCAGGGTTaGGGGCATTTGCTGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTPFRQG*GHLLSS Trigger: TGAACTCAGCAAATGCCCCCAACCCTGCCGAAATGG...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCACAGTTGGATCTGCCATaGTGCCTTTATCCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSQLDLP*CLYPGS Trigger: GCTCCCTGGATAAAGGCATCATGGCAGATCCAACTG...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTACAACTGATGCCTTGTaGGGCACTGTTCCCAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFTTDAL*GTVPSK Trigger: TTTGCTGGGAACAGTGCCTCACAAGGCATCAGTTGT...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACATTGCTTTGTCACAGTTaGCACCGTAGAATCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTLLCHS*HRRIQG Trigger: CCCCTGGATTCTACGGTGTCAACTGTGACAAAGCAA...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTTTGCTTTGTCACAGTTaGCACCGTAGAATCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFLLCHS*HRRIQG Trigger: CCCCTGGATTCTACGGTGTCAACTGTGACAAAGCAA...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCACCATTTCGGCAGGGTTaGGGGCATTTGCTGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSPFRQG*GHLLSS Trigger: TGAACTCAGCAAATGCCCCCAACCCTGCCGAAATGG...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTTCATGGAGTGGATATTaGCAGGAATGGCTGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SLTSLTLPILRPQMCCDFSWSGY*QEWLAF Trigger: GAATGCCAGCCATTCCTGTCAATATCCACTCCATGA...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACATCATGGAGTGGATATTaGCAGGAATGGCTGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTSWSGY*QEWLAF Trigger: GAATGCCAGCCATTCCTGTCAATATCCACTCCATGA...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCAAAGAAGATGGCATTCTaGGGGGTCCTAAGGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSKKMAF*GVLRMV Trigger: CACCATCCTTAGGACCCCTCAGAATGCCATCTTCTT...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCATCATACATCGGGGTATaGACAGGGCTTTCTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSSYIGV*TGLSHS Trigger: ACTGTGAGAAAGCCCTGTGCATACCCCGATGTATGA...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | CCTGATCAACTGACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAAGGACACTCAGCTTGTTaGCATGTTTTAAAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: PDQLTQYKICPKRTEGRKGHSAC*HVLKKM Trigger: CATCTTCTTTAAAACATGTCAACAAGCTGAGTGTCC...TTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGTCAGTTGATCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | CCTGATCAACTGACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAAACTTGCTTTTACCAATaGATTTACCTCCATTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PDQLTQYKICPKRTEGRKTCFYQ*IYLHFG Trigger: GCCGAAATGGAGGTAAATGCATTGGTAAAAGCAAGT...TTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGTCAGTTGATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCAGCTCGCAGACGGACTTaGTTTTACCAATGCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSARRRT*FYQCIY Trigger: GTAAATGCATTGGTAAAAGCAAGTCCGTCTGCGAGC...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACAATTGACAGGAATGGCTaGCATTCTTTGTTGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTIDRNG*HSLLGF Trigger: AAAGCCCAACAAAGAATGCCAGCCATTCCTGTCAAT...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCAATTGACAGGAATGGCTaGCATTCTTTGTTGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSIDRNG*HSLLGF Trigger: AAAGCCCAACAAAGAATGCCAGCCATTCCTGTCAAT...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR TCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCAGGACACTCAGCTTGTTaGCATGTTTTAAAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSGHSAC*HVLKKM Trigger: CATCTTCTTTAAAACATGTCAACAAGCTGAGTGTCC...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR GCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCAACTTGCTTTTACCAATaGATTTACCTCCATTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSTCFYQ*IYLHFG Trigger: GCCGAAATGGAGGTAAATGCATTGGTAAAAGCAAGT...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS-3UTR TCA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCATGCCTTCAGAATTCATaGCAATCACATTCACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQYKICPKRTEGRKSIPSCLQNS*QSHSLQ Trigger: TTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCA...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS TCA 90 bp | GCGTGTGTCGCTCCAGCCCGGCGCCTGCTGGCCTCGGGGCATGCATaGGGCTGGCTCCATACCTCTTATTGCAGTGTCTGCCGTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ACVAPARRLLASGHA*GWLHTSYCSVCRAS Trigger: GCTGGCACGGCAGACACTGCAATAAGAGGTATGGAGCCAGCCTCATGCATGCCCCGAGGCCAGCAGGCGCCGGGCTGGAGCGACACACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 90 bp | GTGGCTGCCCTGCATCCGCTCGCAGCAGGAGCAGGCAAGGTAGGATaGTCCAGAGCCGGAGCGCGAAAGCAGGGAAGGCTCTTCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAALHPLAAGAGKVG*SRAGARKQGRLFSE Trigger: CTCGGAGAAGAGCCTTCCCTGCTTTCGCGCTCCGGCTCTGGAGCATCCTACCTTGCCTGCTCCTGCTGCGAGCGGATGCAGGGCAGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 90 bp | GAAGGCGTGTGTCGCTCCAGCCCGGCGCCTGCTGGCCTCGGGGCATaGATGAGGCTGGCTCCATACCTCTTATTGCAGTGTCTGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EGVCRSSPAPAGLGA*MRLAPYLLLQCLPC Trigger: GCACGGCAGACACTGCAATAAGAGGTATGGAGCCAGCCTCATGCATGCCCCGAGGCCAGCAGGCGCCGGGCTGGAGCGACACACGCCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CCA 90 bp | TGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTTGTTGGGTTCGTaGCAGGTTCCGTGGGCACCACAGCCAGGCTCGCAGACGGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CLPCQPSRHWHLLGS*QVPWAPQPGSQTGL Trigger: TAAGCCCGTCTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020439.11 |
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| CDS CCA 90 bp | TGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTTGTTGGGTTCGTaGCAGGTTCCGTGGGCACCACAGCCAGGCTCGCAGACGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLPCQPSRHWHLLGS*QVPWAPQPGSQTDL Trigger: CAAGTCCGTCTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175867.2 |
||
| CDS CCA 90 bp | CAGCCCTCTCGACACTGGCACTTGTTGGGTTCGTGGCAGGTTCCGTaGGCACCACAGCCAGGCTCGCAGACGGGCTTAGAGCACAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPSRHWHLLGSWQVP*APQPGSQTGLEHRS Trigger: AGACCTGTGCTCTAAGCCCGTCTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020439.11 |
||
| CDS CCA 90 bp | TATTGCAGTGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTTGTTaGGTTCGTGGCAGGTTCCGTGGGCACCACAGCCAGGCTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YCSVCRASPLDTGTC*VRGRFRGHHSQARR Trigger: TCTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CCA 90 bp | CCATACCTCTTATTGCAGTGTCTGCCGTGCCAGCCCTCTCGACACTaGCACTTGTTGGGTTCGTGGCAGGTTCCGTGGGCACCACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PYLLLQCLPCQPSRH*HLLGSWQVPWAPQP Trigger: TGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGAGGTATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS CCA 90 bp | CAGCCCTCTCGACACTGGCACTTGTTGGGTTCGTGGCAGGTTCCGTaGGCACCACAGCCAGGCTCGCAGACGGACTTGCTTTTACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QPSRHWHLLGSWQVP*APQPGSQTDLLLPM Trigger: CATTGGTAAAAGCAAGTCCGTCTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175867.2 |
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| CDS TCA 90 bp | GTAATTGGATTCAGGTGGATCCCTTCTATCCTCAGCCTTTTTAAGTaGAGGCGTGTGTCGCTCCAGCCCGGCGCCTGCTGGCCTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VIGFRWIPSILSLFK*RRVSLQPGACWPRG Trigger: GCCCCGAGGCCAGCAGGCGCCGGGCTGGAGCGACACACGCCTTCACTTAAAAAGGCTGAGGATAGAAGGGATCCACCTGAATCCAATTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 90 bp | GCATGCATGAGGCTGGCTCCATACCTCTTATTGCAGTGTCTGCCGTaGCAGCCCTCTCGACACTGGCACTTGTTGGGTTCGTGGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ACMRLAPYLLLQCLP*QPSRHWHLLGSWQV Trigger: AACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGAGGTATGGAGCCAGCCTCATGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGCGACACTGGCACTTGTaGGGTTCGTGGCAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TAFEHPTRERLTKAVNPVRHWHL*GSWQVP Trigger: CGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCG...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 90 bp | CTTGTGAGGCACTGTTCCCAGCAAAGGGACATTGACAGTTGGATCTaGCATGATGCCTTTATCCAGGGAGCGCAGAGACAGGAACTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LVRHCSQQRDIDSWI*HDAFIQGAQRQELV Trigger: TACGAGTTCCTGTCTCTGCGCTCCCTGGATAAAGGCATCATGGCAGATCCAACTGTCAATGTCCCTTTGCTGGGAACAGTGCCTCACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS TCA 90 bp | GAGACAATCAGAATGTCTTCTTCAAATCCTATGAGCACTCTAGCCTaGTGGGCGTCGATCCACAGGTACAAGCTCTCCTCAGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ETIRMSSSNPMSTLA*WASIHRYKLSSGGC Trigger: GCAGCCACCTGAGGAGAGCTTGTACCTGTGGATCGACGCCCATCAGGCTAGAGTGCTCATAGGATTTGAAGAAGACATTCTGATTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGTCCATTTCGGCAGGGTaGGGGGCATTTGCTGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TAFEHPTRERLTKAVNPVSISAG*GAFAEF Trigger: GAACTCAGCAAATGCCCCCAACCCTGCCGAAATGGA...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGCCCAGCAAAGGGACATaGACAGTTGGATCTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TAFEHPTRERLTKAVNPVPSKGT*TVGSAM Trigger: CATGGCAGATCCAACTGTCAATGTCCCTTTGCTGGG...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CCA 90 bp | AAGTATTCTGCCTGCCCCGCAGCTTGCCAGGTAAAATTCATGGAGTaGATATTGACAGGAATGGCTGGCATTCTTTGTTGGGCTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KYSACPAACQVKFME*ILTGMAGILCWAFL Trigger: CAGGAAAGCCCAACAAAGAATGCCAGCCATTCCTGTCAATATCCACTCCATGAATTTTACCTGGCAAGCTGCGGGGCAGGCAGAATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 90 bp | GGTGTTGCCTTCAGAATTCATGACAATCACATTCACTTCAAATGCTaGTACCCCGTCTTGTTTGCCGAGACACGGGAAACCAACTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVAFRIHDNHIHFKC*YPVLFAETRETNLN Trigger: GTTCAAGTTGGTTTCCCGTGTCTCGGCAAACAAGACGGGGTAGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 90 bp | GATGGTGTTGCCTTCAGAATTCATGACAATCACATTCACTTCAAATaGTGCTACCCCGTCTTGTTTGCCGAGACACGGGAAACCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGVAFRIHDNHIHFK*CYPVLFAETRETNL Trigger: CAAGTTGGTTTCCCGTGTCTCGGCAAACAAGACGGGGTAGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCAACACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACACGACACTGGCACTTGTaGGGTTCGTGGCAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTRHWHL*GSWQVP Trigger: CGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCG...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | ACAGCATTTGAACATCCAACACGCGAAAGGTTAACAAAGGCTGTGAACCCGGTGGGGACACTCAGCTTGTaGACATGTTTTAAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAFEHPTRERLTKAVNPVGTLSL*TCFKED Trigger: ATCTTCTTTAAAACATGTCAACAAGCTGAGTGTCCC...CACCGGGTTCACAGCCTTTGTTAACCTTTCGCGTGTTGGATGTTCAAATGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACATCCATTTCGGCAGGGTaGGGGGCATTTGCTGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTSISAG*GAFAEF Trigger: GAACTCAGCAAATGCCCCCAACCCTGCCGAAATGGA...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCATGCCTGCCCCGCAGCTaGCCAGGTAAAATTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQYKICPKRTEGRKSIPSCLPRS*PGKIHG Trigger: TCCATGAATTTTACCTGGCAAGCTGCGGGGCAGGCA...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCACCCAGCAAAGGGACATaGACAGTTGGATCTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TQYKICPKRTEGRKSIPSPSKGT*TVGSAM Trigger: CATGGCAGATCCAACTGTCAATGTCCCTTTGCTGGG...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | CCTGATCAACTGACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAAGGCTCGCAGACGGACTaGCTTTTACCAATGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: PDQLTQYKICPKRTEGRKGSQTD*LLPMHL Trigger: TAAATGCATTGGTAAAAGCAAGTCCGTCTGCGAGCC...TTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGTCAGTTGATCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACAAATGGCTGGCATTCTTaGTTGGGCTTTCCTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTNGWHS*LGFPEI Trigger: GATTTCAGGAAAGCCCAACAAAGAATGCCAGCCATT...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACATTCATGGAGTGGATATaGACAGGAATGGCTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTFMEWI*TGMAGI Trigger: AATGCCAGCCATTCCTGTCAATATCCACTCCATGAA...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTGTCCTAAGGATGGTGTaGCCTTCAGAATTCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLTSLTLPILRPQMCCDFVLRMV*PSEFMT Trigger: TGTCATGAATTCTGAAGGCAACACCATCCTTAGGAC...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCAAATGGCTGGCATTCTTaGTTGGGCTTTCCTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: TQYKICPKRTEGRKSIPSNGWHS*LGFPEI Trigger: GATTTCAGGAAAGCCCAACAAAGAATGCCAGCCATT...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCATTCATGGAGTGGATATaGACAGGAATGGCTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: TQYKICPKRTEGRKSIPSFMEWI*TGMAGI Trigger: AATGCCAGCCATTCCTGTCAATATCCACTCCATGAA...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | TCCATCCAATGCAAAGGCTTCATACATTATATTCCTTATCTCGTCGTGTTTACATCCGGGACACTCAGCTaGTTGACATGTTTTAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIQCKGFIHYIPYLVVFTSGTLS*LTCFKE Trigger: TTCTTTAAAACATGTCAACAAGCTGAGTGTCCCGGA...TGTAAACACGACGAGATAAGGAATATAATGTATGAAGCCTTTGCATTGGATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS-3UTR CAA 90 bp | AGTTTAACCTCTCTAACACTCCCCATTCTAAGACCACAAATGTGTTGTGATTTTTTCGGGCACTTACACTaGCTTTTACCAATGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLTSLTLPILRPQMCCDFFGHLH*LLPMHL Trigger: TAAATGCATTGGTAAAAGCAAGTGTAAGTGCCCGAA...AAAATCACAACACATTTGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020439.11 |
||
| CDS-3UTR CAA 90 bp | ACACAATATAAGATCTGTCCCAAAAGGACTGAAGGAAGAAAATCTATACCATCAGGGACACTCAGCTTGTaGACATGTTTTAAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TQYKICPKRTEGRKSIPSGTLSL*TCFKED Trigger: ATCTTCTTTAAAACATGTCAACAAGCTGAGTGTCCC...TGATGGTATAGATTTTCTTCCTTCAGTCCTTTTGGGACAGATCTTATATTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS TCA 72 bp | GCTCCAGCCCGGCGCCTGCTGGCCTCGGGGCATGCATaGGGCTGGCTCCATACCTCTTATTGCAGTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: APARRLLASGHA*GWLHTSYCSVC Trigger: GCAGACACTGCAATAAGAGGTATGGAGCCAGCCTCATGCATGCCCCGAGGCCAGCAGGCGCCGGGCTGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS GCA 72 bp | CTGCATCCGCTCGCAGCAGGAGCAGGCAAGGTAGGATaGTCCAGAGCCGGAGCGCGAAAGCAGGGAAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHPLAAGAGKVG*SRAGARKQGRL Trigger: GAGCCTTCCCTGCTTTCGCGCTCCGGCTCTGGAGCATCCTACCTTGCCTGCTCCTGCTGCGAGCGGATGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS CCA 72 bp | TGCCAGCCCTCTCGACACTGGCACTTGTTGGGTTCGTaGCAGGTTCCGTGGGCACCACAGCCAGGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CQPSRHWHLLGS*QVPWAPQPGSQ Trigger: CTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS CCA 72 bp | GTCTGCCGTGCCAGCCCTCTCGACACTGGCACTTGTTaGGTTCGTGGCAGGTTCCGTGGGCACCACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VCRASPLDTGTC*VRGRFRGHHSQ Trigger: CTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
||
| CDS GCA 72 bp | GCGTCGATCCACAGGTACAAGCTCTCCTCAGGTGGCTaGCCTGCATCCGCTCGCAGCAGGAGCAGGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: ASIHRYKLSSGG*PASARSRSRQG Trigger: ACCTTGCCTGCTCCTGCTGCGAGCGGATGCAGGGCAGCCACCTGAGGAGAGCTTGTACCTGTGGATCGACGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CCA 72 bp | CGACACTGGCACTTGTTGGGTTCGTGGCAGGTTCCGTaGGCACCACAGCCAGGCTCGCAGACGGGCTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: RHWHLLGSWQVP*APQPGSQTGLE Trigger: CTCTAAGCCCGTCTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020439.11 |
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| CDS CAA 72 bp | TGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTTGTaGGGTTCGTGGCAGGTTCCGTGGGCACCACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: CLPCQPSRHWHL*GSWQVPWAPQP Trigger: TGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 72 bp | CAGTGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTaGTTGGGTTCGTGGCAGGTTCCGTGGGCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: QCLPCQPSRHWH*LGSWQVPWAPQ Trigger: CTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 90 bp | TTATTGCAGTGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTTGTaGGGTTCGTGGCAGGTTCCGTGGGCACCACAGCCAGGCTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLQCLPCQPSRHWHL*GSWQVPWAPQPGSQ Trigger: CTGCGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 90 bp | CTCTTATTGCAGTGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTaGTTGGGTTCGTGGCAGGTTCCGTGGGCACCACAGCCAGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLLQCLPCQPSRHWH*LGSWQVPWAPQPGS Trigger: CGAGCCTGGCTGTGGTGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 90 bp | CCTGCTGGCCTCGGGGCATGCATGAGGCTGGCTCCATACCTCTTATaGCAGTGTCTGCCGTGCCAGCCCTCTCGACACTGGCACTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PAGLGACMRLAPYLL*QCLPCQPSRHWHLL Trigger: CAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGAGGTATGGAGCCAGCCTCATGCATGCCCCGAGGCCAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 72 bp | CTCGGGGCATGCATGAGGCTGGCTCCATACCTCTTATaGCAGTGTCTGCCGTGCCAGCCCTCTCGACACTGG | + |
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Preference number: 6 (lower is better) Translates to: LGACMRLAPYLL*QCLPCQPSRHW Trigger: CCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGAGGTATGGAGCCAGCCTCATGCATGCCCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CCA 72 bp | TTATTGCAGTGTCTGCCGTGCCAGCCCTCTCGACACTaGCACTTGTTGGGTTCGTGGCAGGTTCCGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LLQCLPCQPSRH*HLLGSWQVPWA Trigger: TGCCCACGGAACCTGCCACGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS TCA 72 bp | TTCAGGTGGATCCCTTCTATCCTCAGCCTTTTTAAGTaGAGGCGTGTGTCGCTCCAGCCCGGCGCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FRWIPSILSLFK*RRVSLQPGACW Trigger: CCAGCAGGCGCCGGGCTGGAGCGACACACGCCTTCACTTAAAAAGGCTGAGGATAGAAGGGATCCACCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 72 bp | AGGCTGGCTCCATACCTCTTATTGCAGTGTCTGCCGTaGCAGCCCTCTCGACACTGGCACTTGTTGGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: RLAPYLLLQCLP*QPSRHWHLLGS Trigger: CGAACCCAACAAGTGCCAGTGTCGAGAGGGCTGGCACGGCAGACACTGCAATAAGAGGTATGGAGCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 72 bp | CACAGCCAGGCTCGCAGACGGACTTGCTTTTACCAATaGATTTACCTCCATTTCGGCAGGGTTGGGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: HSQARRRTCFYQ*IYLHFGRVGGI Trigger: AATGCCCCCAACCCTGCCGAAATGGAGGTAAATGCATTGGTAAAAGCAAGTCCGTCTGCGAGCCTGGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175867.2 |
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| CDS CCA 72 bp | GTGAGGCACTGTTCCCAGCAAAGGGACATTGACAGTTaGATCTGCCATGATGCCTTTATCCAGGGAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: VRHCSQQRDIDS*ICHDAFIQGAQ Trigger: CTGCGCTCCCTGGATAAAGGCATCATGGCAGATCCAACTGTCAATGTCCCTTTGCTGGGAACAGTGCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 90 bp | GGCACCACAGCCAGGCTCGCAGACGGGCTTAGAGCACAGGTCTCCTaGGTAACCTTTCGGGCACTTACACTTGCTTTTACCAATGCATTT | + |
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Preference number: 6 (lower is better) Translates to: GTTARLADGLRAQVS*VTFRALTLAFTNAF Trigger: AAATGCATTGGTAAAAGCAAGTGTAAGTGCCCGAAAGGTTACCAAGGAGACCTGTGCTCTAAGCCCGTCTGCGAGCCTGGCTGTGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020439.11 |
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| CDS GCA 72 bp | TTTCGGCAGGGTTGGGGGCATTTGCTGAGTTCACACTaGTCTCCCTCGAGTCCAGGAGGGCAAATACATTTT | + |
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Preference number: 6 (lower is better) Translates to: FRQGWGHLLSSH*SPSSPGGQIHF Trigger: AAAATGTATTTGCCCTCCTGGACTCGAGGGAGAGCAGTGTGAACTCAGCAAATGCCCCCAACCCTGCCGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CCA 72 bp | CTTTTACCAATGCATTTACCTCCATTTCGGCAGGGTTaGGGGCATTTGCTGAGTTCACACTGCTCTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLPMHLPPFRQG*GHLLSSHCSPS Trigger: CGAGGGAGAGCAGTGTGAACTCAGCAAATGCCCCCAACCCTGCCGAAATGGAGGTAAATGCATTGGTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 72 bp | CAGGAACTCGTAGAAGTATTCTGCCTGCCCCGCAGCTaGCCAGGTAAAATTCATGGAGTGGATATTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: QELVEVFCLPRS*PGKIHGVDIDR Trigger: CCTGTCAATATCCACTCCATGAATTTTACCTGGCAAGCTGCGGGGCAGGCAGAATACTTCTACGAGTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 72 bp | GGTAACCTTTCGGGCACTTACACTTGCTTTTACCAATaGATTTACCTCCATTTCGGCAGGGTTGGGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: GNLSGTYTCFYQ*IYLHFGRVGGI Trigger: AATGCCCCCAACCCTGCCGAAATGGAGGTAAATGCATTGGTAAAAGCAAGTGTAAGTGCCCGAAAGGTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020439.11 |
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| CDS GCA 72 bp | TCACATTCACTTCAAATGCTGCTACCCCGTCTTGTTTaGCGAGACACGGGAAACCAACTTGAACAACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SHSLQMLLPRLV*RDTGNQLEQLM Trigger: CATCAGTTGTTCAAGTTGGTTTCCCGTGTCTCGGCAAACAAGACGGGGTAGCAGCATTTGAAGTGAATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 72 bp | GCCTTCAGAATTCATGACAATCACATTCACTTCAAATaGTGCTACCCCGTCTTGTTTGCCGAGACACGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AFRIHDNHIHFK*CYPVLFAETRE Trigger: TTCCCGTGTCTCGGCAAACAAGACGGGGTAGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS CAA 72 bp | GACAATCACATTCACTTCAAATGCTGCTACCCCGTCTaGTTTGCCGAGACACGGGAAACCAACTTGAACAAC | + |
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Preference number: 6 (lower is better) Translates to: DNHIHFKCCYPV*FAETRETNLNN Trigger: GTTGTTCAAGTTGGTTTCCCGTGTCTCGGCAAACAAGACGGGGTAGCAGCATTTGAAGTGAATGTGATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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| CDS GCA 72 bp | TTCAGAATTCATGACAATCACATTCACTTCAAATGCTaGTACCCCGTCTTGTTTGCCGAGACACGGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: FRIHDNHIHFKC*YPVLFAETRET Trigger: GGTTTCCCGTGTCTCGGCAAACAAGACGGGGTAGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020439.11 ENSMUST00000175867.2 |
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