RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WHRN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039137

Ensembl transcript IDs: ENSMUST00000063650.10, ENSMUST00000063672.10, ENSMUST00000084510.8, ENSMUST00000095037.2, ENSMUST00000095038.8, ENSMUST00000102867.8, ENSMUST00000107393.8, ENSMUST00000119294.8, ENSMUST00000133425.2, ENSMUST00000144965.8, ENSMUST00000145630.8

Found 887 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGTCAGGGTGGGGTaGGAGACTCTGCCTGTGACCCCGGCTGATAGCCCTGAACTTGGC +
Preference number: 1 (lower is better)
Translates to: SLGQGPRQGVCVRVG*ETLPVTPADSPELG
Trigger: GCCAAGTTCAGGGCTATCAGCCGGGGTCACAGGCAGAGTCTCCCACCCCACCCTGACACATACACCCTGCCTGGGCCCTTGGCCCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR GCA 90 bp GGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTaGTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: GTEPGGRGCDWCEQA*WRLICGTEGPPGRK
Trigger: CTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTaGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: TEPGGRGCDWCEQAC*RLICGTEGPPGRKQ
Trigger: CTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR GCA 90 bp CCACGGATAGGACAACACCATGCCTGCTGTAACCTGGAGGGCAGCTaGCTCCGCCCTGCTACCTCTTCCCAGCTGTGTGTGTTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: PRIGQHHACCNLEGS*LRPATSSQLCVFPS
Trigger: GGAGGGAAACACACACAGCTGGGAAGAGGTAGCAGGGCGGAGGCAGCTGCCCTCCAGGTTACAGCAGGCATGGTGTTGTCCTATCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR CCA 90 bp AGCCGCTCACCTATTGAGGGGAACAGCAGGGTCCTCAGGAGAAGCTaGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTATCCTTGGGGCT +
Preference number: 1 (lower is better)
Translates to: SRSPIEGNSRVLRRS*EALLLRGASFILGA
Trigger: AGCCCCAAGGATAAAGCTGGCTCCTCGGAGCAGCAAGGCCTCCCAGCTTCTCCTGAGGACCCTGCTGTTCCCCTCAATAGGTGAGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
3UTR CCA 90 bp CCAGCTGTGTGTGTTTCCCTCCTTCTGAGTCCACAGTATCAACAATaGAGGACAGACTCTCCCATGGCCCCACGGCTGGAGCTGGCTGTG +
Preference number: 1 (lower is better)
Translates to: PAVCVSLLLSPQYQQ*RTDSPMAPRLELAV
Trigger: CACAGCCAGCTCCAGCCGTGGGGCCATGGGAGAGTCTGTCCTCCATTGTTGATACTGTGGACTCAGAAGGAGGGAAACACACACAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR TCA 90 bp CTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTaGACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGG +
Preference number: 1 (lower is better)
Translates to: LICGTEGPPGRKQSV*TLLCPHSQRPRHLG
Trigger: CCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR TCA 90 bp CTCCGCCCTGCTACCTCTTCCCAGCTGTGTGTGTTTCCCTCCTTCTaGGTCCACAGTATCAACAATGGAGGACAGACTCTCCCATGGCCC +
Preference number: 1 (lower is better)
Translates to: LRPATSSQLCVFPSF*VHSINNGGQTLPWP
Trigger: GGGCCATGGGAGAGTCTGTCCTCCATTGTTGATACTGTGGACTCAGAAGGAGGGAAACACACACAGCTGGGAAGAGGTAGCAGGGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR CCA 90 bp CTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTaGGGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCC +
Preference number: 1 (lower is better)
Translates to: LCELSCVLTAKGLGI*GGSTPLQPREMYSA
Trigger: GGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 90 bp AATAAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTaGTGTGAACAAGCGTGCTGGCGGCTCATTTGTGGCACTGAAGGT +
Preference number: 1 (lower is better)
Translates to: NKYHRGTEPGGRGCD*CEQACWRLICGTEG
Trigger: ACCTTCAGTGCCACAAATGAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 90 bp GCCAGAAGAGGCGGGAGGAAGATGTTGCTGTGTAGAGAGGGGCAGTaGACCACCTGGAAGAGTGAGAACTCAGTGGACTTTCTCTCCCAG +
Preference number: 1 (lower is better)
Translates to: ARRGGRKMLLCREGQ*TTWKSENSVDFLSQ
Trigger: CTGGGAGAGAAAGTCCACTGAGTTCTCACTCTTCCAGGTGGTCCACTGCCCCTCTCTACACAGCAACATCTTCCTCCCGCCTCTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR CCA 90 bp GCCAGCTTTATCCTTGGGGCTGGGGGTCTCCATAGGTCAGCAACTTaGGGCAGGTTTGGTGCCAGCATTTCCATTCACAGATGGAAAGGC +
Preference number: 1 (lower is better)
Translates to: ASFILGAGGLHRSAT*GRFGASISIHRWKG
Trigger: GCCTTTCCATCTGTGAATGGAAATGCTGGCACCAAACCTGCCCCAAGTTGCTGACCTATGGAGACCCCCAGCCCCAAGGATAAAGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
3UTR TCA 90 bp GAGCTGGGCAACTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTaGGACCTTCTTGCTGGGTCACAGATAGCATCTTCTTATTCTGTT +
Preference number: 1 (lower is better)
Translates to: ELGNSKAKHQWVLCV*DLLAGSQIASSYSV
Trigger: AACAGAATAAGAAGATGCTATCTGTGACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAGTTGCCCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
3UTR GCA 90 bp CTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTaGTGGGTCACAGATAGCATCTTCTTATTCTGTTGGCTTTCTGGG +
Preference number: 1 (lower is better)
Translates to: LKSKTPVGSVRVRPS*WVTDSIFLFCWLSG
Trigger: CCCAGAAAGCCAACAGAATAAGAAGATGCTATCTGTGACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
3UTR TCA 90 bp CTTCTCCATAATGTAATGTTGACAGATGAAGTTCCACAGACAGGATaGTGGCTTATGTACAGGTTATTGCTGACAGTTCTAGAGCTGGGC +
Preference number: 1 (lower is better)
Translates to: LLHNVMLTDEVPQTG*WLMYRLLLTVLELG
Trigger: GCCCAGCTCTAGAACTGTCAGCAATAACCTGTACATAAGCCATCATCCTGTCTGTGGAACTTCATCTGTCAACATTACATTATGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
3UTR-3UTR TCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGGGGGTGCGACTGGTGTaGACAAGCGTGCTGGCGGCT +
Preference number: 2 (lower is better)
Translates to: LTLLVACKASGIGWECKGGVRLV*TSVLAA
Trigger: AGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCC...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GACTTTCTCTCCCAGCAGGTTCTCGAGCCCACGGATAGGACAACACCATGCCTGCCATGGCCCCACGGCTaGAGCTGGCTGTGCGGAGTG +
Preference number: 2 (lower is better)
Translates to: DFLSQQVLEPTDRTTPCLPWPHG*SWLCGV
Trigger: CACTCCGCACAGCCAGCTCCAGCCGTGGGGCCATGG...CAGGCATGGTGTTGTCCTATCCGTGGGCTCGAGAACCTGCTGGGAGAGAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR-3UTR GCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCCAGGAGGAAGGGGGTaGGACTGGTGTGAACAAGCG +
Preference number: 2 (lower is better)
Translates to: LTLLVACKASGIGWECKGPGGRG*DWCEQA
Trigger: CGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCAGGAAGCAGTCTGTGTaGACTCTCCTGTGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACRKQSV*TLLCPH
Trigger: GTGAGGACACAGGAGAGTTCACACAGACTGCTTCCT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTTCTTCTCCTAGTCTaGGCCAAGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELLLLV*AKGPGR
Trigger: CCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGGCTCATTTGTGGCACTaGAGGTCCTCCTGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: LTLLVACKASGIGWECKGAHLWH*RSSWQE
Trigger: TTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGC...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR GCA 90 bp CAGCAGGGTCCTCAGGAGAAGCTGGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTTGGGGCAGGTTTGGTaGCAGCATTTCCATTCACAG +
Preference number: 2 (lower is better)
Translates to: QQGPQEKLGGLAAPRSQLLGQVW*QHFHSQ
Trigger: CTGTGAATGGAAATGCTGGCACCAAACCTGCCCCAA...AAGCTGGCTCCTCGGAGCAGCAAGGCCTCCCAGCTTCTCCTGAGGACCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
3UTR-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTCTGCTTGCCTTGTCTaGCCCTCTTCTTCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACSACLV*PSSSPS
Trigger: ACTAGGAGAAGAAGAGGGCCAGACAAGGCAAGCAGA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCCCCCTACTGTGTTTCTaGCACACAGGTTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLPLLCF*HTGFNL
Trigger: CAGGTTAAAACCTGTGTGCCAGAAACACAGTAGGGG...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp AGGGTCCTCAGGAGAAGCTGGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTATCGATGGAAAGGCAGGCTaGAAGGGAGCAGTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: RVLRRSWEALLLRGASFIDGKAG*KGAVCP
Trigger: TGGACAGACTGCTCCCTTCCAGCCTGCCTTTCCATC...GATAAAGCTGGCTCCTCGGAGCAGCAAGGCCTCCCAGCTTCTCCTGAGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
3UTR-3UTR CCA 90 bp TCAGGAGAAGCTGGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTATCCTTGGGGCATAGGTCAGCAACTTaGGGCAGGTTTGGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: SGEAGRPCCSEEPALSLGHRSAT*GRFGAS
Trigger: GCTGGCACCAAACCTGCCCCAAGTTGCTGACCTATG...CCCCAAGGATAAAGCTGGCTCCTCGGAGCAGCAAGGCCTCCCAGCTTCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
3UTR-3UTR TCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGAGGAAGCAGTCTGTGTaGACTCTCCTGTGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: LLVACKASGIGWECKGKLRKQSV*TLLCPH
Trigger: GTGAGGACACAGGAGAGTTCACACAGACTGCTTCCT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCTTCTTCTCCTAGTCTaGGCCAAGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFLLLLV*AKGPGR
Trigger: CCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp CTGGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTATCCTTGGGGCTGGGGGTCTAACTTGGGGCAGGTTTaGTGCCAGCATTTCCATTCA +
Preference number: 2 (lower is better)
Translates to: LGGLAAPRSQLYPWGWGSNLGQV*CQHFHS
Trigger: TGAATGGAAATGCTGGCACCAAACCTGCCCCAAGTT...AGACCCCCAGCCCCAAGGATAAAGCTGGCTCCTCGGAGCAGCAAGGCCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
3UTR-3UTR TCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCACACAGGTTTTAACCTaGCTTTCTGCTTGCCTTGTC +
Preference number: 2 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACTQVLT*LSACLV
Trigger: GACAAGGCAAGCAGAAAGTCAGGTTAAAACCTGTGT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCTCATTTGTGGCACTaGAGGTCCTCCTGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQAHLWH*RSSWQE
Trigger: TTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGGGGTGCGACTGGTGTaGACAAGCGTGCTGGCGGCT +
Preference number: 2 (lower is better)
Translates to: LYINTLTLLVACKASGIGGVRLV*TSVLAA
Trigger: AGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGTGTATGTGTCAGGGTaGGGTGGGAGACTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFVYVSG*GGRLCL
Trigger: CAGGCAGAGTCTCCCACCCCACCCTGACACATACAC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAGGAAGCAGTCTGTGTaGACTCTCCTGTGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQRKQSV*TLLCPH
Trigger: GTGAGGACACAGGAGAGTTCACACAGACTGCTTCCT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTTTAACCTGACTTTCTaGTTGCCTTGTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPFNLTF*LPCLAL
Trigger: GAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTTAAA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR GCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGTTTAACCTGACTTTCTaGTTGCCTTGTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: LTLLVACKASGIGWECKGFNLTF*LPCLAL
Trigger: GAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTTAAA...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCTTCTTCTCCTAGTCTaGGCCAAGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLLLLLV*AKGPGR
Trigger: CCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTCTGCTTGCCTTGTCTaGCCCTCTTCTTCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGSACLV*PSSSPS
Trigger: ACTAGGAGAAGAAGAGGGCCAGACAAGGCAAGCAGA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCCCCTACTGTGTTTCTaGCACACAGGTTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVPLLCF*HTGFNL
Trigger: CAGGTTAAAACCTGTGTGCCAGAAACACAGTAGGGG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGTGTATGTGTCAGGGTaGGGTGGGAGACTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LYINTLTLLVACKASGIGVYVSG*GGRLCL
Trigger: CAGGCAGAGTCTCCCACCCCACCCTGACACATACAC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACCCCTACTGTGTTTCTaGCACACAGGTTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQPLLCF*HTGFNL
Trigger: CAGGTTAAAACCTGTGTGCCAGAAACACAGTAGGGG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCACACAGGTTTTAACCTaGCTTTCTGCTTGCCTTGTC +
Preference number: 2 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGTQVLT*LSACLV
Trigger: GACAAGGCAAGCAGAAAGTCAGGTTAAAACCTGTGT...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCCCCTACTGTGTTTCTaGCACACAGGTTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFPLLCF*HTGFNL
Trigger: CAGGTTAAAACCTGTGTGCCAGAAACACAGTAGGGG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCACACAGGTTTTAACCTaGCTTTCTGCTTGCCTTGTC +
Preference number: 2 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFTQVLT*LSACLV
Trigger: GACAAGGCAAGCAGAAAGTCAGGTTAAAACCTGTGT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGAGGAAGCAGTCTGTGTaGACTCTCCTGTGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLRKQSV*TLLCPH
Trigger: GTGAGGACACAGGAGAGTTCACACAGACTGCTTCCT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTCTTCTTCTCCTAGTCTaGGCCAAGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCLLLLV*AKGPGR
Trigger: CCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAG...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATCTGCTTGCCTTGTCTaGCCCTCTTCTTCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGSACLV*PSSSPS
Trigger: ACTAGGAGAAGAAGAGGGCCAGACAAGGCAAGCAGA...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGTGTATGTGTCAGGGTaGGGTGGGAGACTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCVYVSG*GGRLCL
Trigger: CAGGCAGAGTCTCCCACCCCACCCTGACACATACAC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTCTGCTTGCCTTGTCTaGCCCTCTTCTTCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: LYINTLTLLVACKASGIGSACLV*PSSSPS
Trigger: ACTAGGAGAAGAAGAGGGCCAGACAAGGCAAGCAGA...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGGGTGCGACTGGTGTaGACAAGCGTGCTGGCGGCT +
Preference number: 2 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQGVRLV*TSVLAA
Trigger: AGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGTGTATGTGTCAGGGTaGGGTGGGAGACTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGVYVSG*GGRLCL
Trigger: CAGGCAGAGTCTCCCACCCCACCCTGACACATACAC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCCCCTACTGTGTTTCTaGCACACAGGTTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLPLLCF*HTGFNL
Trigger: CAGGTTAAAACCTGTGTGCCAGAAACACAGTAGGGG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCACACAGGTTTTAACCTaGCTTTCTGCTTGCCTTGTC +
Preference number: 2 (lower is better)
Translates to: LYINTLTLLVACKASGIGTQVLT*LSACLV
Trigger: GACAAGGCAAGCAGAAAGTCAGGTTAAAACCTGTGT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGCTCATTTGTGGCACTaGAGGTCCTCCTGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGAHLWH*RSSWQE
Trigger: TTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp TGTTCATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCTCTATCCCCAGACTaGGAGCCCCAGAAGACATAT +
Preference number: 2 (lower is better)
Translates to: CSCIRVGIRGQLALSSLFPLSPD*EPQKTY
Trigger: ATATGTCTTCTGGGGCTCTCAGTCTGGGGATAGAGG...AAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
3UTR-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCAGGAAGCAGTCTGTGTaGACTCTCCTGTGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGRKQSV*TLLCPH
Trigger: GTGAGGACACAGGAGAGTTCACACAGACTGCTTCCT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACTTCTTCTCCTAGTCTaGGCCAAGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQLLLLV*AKGPGR
Trigger: CCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGTGTATGTGTCAGGGTaGGGTGGGAGACTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQVYVSG*GGRLCL
Trigger: CAGGCAGAGTCTCCCACCCCACCCTGACACATACAC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGCCTCTGGGATAGGCTaGGAGTGCAAAGGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQASGIG*ECKGKL
Trigger: CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CCA 90 bp GTTATTGCTGACAGTTCTAGAGCTGGGCAACTCAAAAGCAAAACACCAGTGGGTATCTTCTTATTCTGTTaGCTTTCTGGGGCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: VIADSSRAGQLKSKTPVGIFLFC*LSGASL
Trigger: CAAGGAGGCCCCAGAAAGCCAACAGAATAAGAAGAT...ACCCACTGGTGTTTTGCTTTTGAGTTGCCCAGCTCTAGAACTGTCAGCAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
3UTR-3UTR GCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATCATATCTTTCTTAGATaGCCACTGTCCCCATGTCCA +
Preference number: 2 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHHIFLR*PLSPCP
Trigger: TGGACATGGGGACAGTGGGCATCTAAGAAAGATATG...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
3UTR-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCTTTAACCTGACTTTCTaGTTGCCTTGTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGFNLTF*LPCLAL
Trigger: GAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTTAAA...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAAGGAAGCAGTCTGTGTaGACTCTCCTGTGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQRKQSV*TLLCPH
Trigger: GTGAGGACACAGGAGAGTTCACACAGACTGCTTCCT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAATTTAACCTGACTTTCTaGTTGCCTTGTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQFNLTF*LPCLAL
Trigger: GAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTTAAA...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 72 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTaGTGTGAACAAGCGTGCTGGCGGCTCATTTGTGGC +
Preference number: 3 (lower is better)
Translates to: HRGTEPGGRGCD*CEQACWRLICG
Trigger: GCCACAAATGAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR GCA 72 bp CAGACTCTCCCATGGCCCCACGGCTGGAGCTGGCTGTaGGGAGTGGGAGGTGTTTTTGGTGATGTTGACGCC +
Preference number: 3 (lower is better)
Translates to: QTLPWPHGWSWL*GVGGVFGDVDA
Trigger: GGCGTCAACATCACCAAAAACACCTCCCACTCCGCACAGCCAGCTCCAGCCGTGGGGCCATGGGAGAGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR GCA 72 bp AGGTTCTCGAGCCCACGGATAGGACAACACCATGCCTaGTGTAACCTGGAGGGCAGCTGCCTCCGCCCTGCT +
Preference number: 3 (lower is better)
Translates to: RFSSPRIGQHHA*CNLEGSCLRPA
Trigger: AGCAGGGCGGAGGCAGCTGCCCTCCAGGTTACAGCAGGCATGGTGTTGTCCTATCCGTGGGCTCGAGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR CCA 72 bp GGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTaGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: GGRGCDWCEQAC*RLICGTEGPPG
Trigger: GCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCGACTTTCTGCTTGCCTaGTCTGGCCCTCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLDFLLA*SGPLLL
Trigger: GAGAAGAAGAGGGCCAGACAAGGCAAGCAGAAAGTC...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCAACCTGACTTTCTGCTaGCCTTGTCTGGCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLNLTFC*PCLALF
Trigger: GAAGAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 72 bp GGAGGACAGACTCTCCCATGGCCCCACGGCTGGAGCTaGCTGTGCGGAGTGGGAGGTGTTTTTGGTGATGTT +
Preference number: 3 (lower is better)
Translates to: GGQTLPWPHGWS*LCGVGGVFGDV
Trigger: AACATCACCAAAAACACCTCCCACTCCGCACAGCCAGCTCCAGCCGTGGGGCCATGGGAGAGTCTGTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR-3UTR CAA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCAACCTGACTTTCTGCTaGCCTTGTCTGGCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACNLTFC*PCLALF
Trigger: GAAGAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGACTTTCTGCTTGCCTaGTCTGGCCCTCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: LLVACKASGIGWECKGKLDFLLA*SGPLLL
Trigger: GAGAAGAAGAGGGCCAGACAAGGCAAGCAGAAAGTC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 72 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTaGGGTGGCAGTACCCCTCTCCAGCCTAGAGAAATG +
Preference number: 3 (lower is better)
Translates to: LSCVLTAKGLGI*GGSTPLQPREM
Trigger: CATTTCTCTAGGCTGGAGAGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 72 bp AAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTaGGATAGGCTGGGAGTGCAAAGGGAAGCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: KYTDIAGRLQGL*DRLGVQREAGA
Trigger: GGCCCCAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGACTTTCTGCTTGCCTaGTCTGGCCCTCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREDFLLA*SGPLLL
Trigger: GAGAAGAAGAGGGCCAGACAAGGCAAGCAGAAAGTC...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGGACTTTCTGCTTGCCTaGTCTGGCCCTCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: TLLVACKASGIGWECKGKDFLLA*SGPLLL
Trigger: GAGAAGAAGAGGGCCAGACAAGGCAAGCAGAAAGTC...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCCCTAACATAGTTTTATaGAGCCCCTACTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLPNIVL*SPYCVS
Trigger: AGAAACACAGTAGGGGCTCAATAAAACTATGTTAGG...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 72 bp TGTGTTTCCCTCCTTCTGAGTCCACAGTATCAACAATaGAGGACAGACTCTCCCATGGCCCCACGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: CVSLLLSPQYQQ*RTDSPMAPRLE
Trigger: CTCCAGCCGTGGGGCCATGGGAGAGTCTGTCCTCCATTGTTGATACTGTGGACTCAGAAGGAGGGAAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGACTTTCTGCTTGCCTaGTCTGGCCCTCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFDFLLA*SGPLLL
Trigger: GAGAAGAAGAGGGCCAGACAAGGCAAGCAGAAAGTC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCAACCTGACTTTCTGCTaGCCTTGTCTGGCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFNLTFC*PCLALF
Trigger: GAAGAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR GCA 72 bp GCTCTGTATATAAATACACTGACATTGCTGGTCGCCTaGAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: ALYINTLTLLVA*KASGIGWECKG
Trigger: CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCCTAACATAGTTTTATaGAGCCCCTACTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPPNIVL*SPYCVS
Trigger: AGAAACACAGTAGGGGCTCAATAAAACTATGTTAGG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCAACCTGACTTTCTGCTaGCCTTGTCTGGCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: LYINTLTLLVACKASGIGNLTFC*PCLALF
Trigger: GAAGAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCCTAACATAGTTTTATaGAGCCCCTACTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVPNIVL*SPYCVS
Trigger: AGAAACACAGTAGGGGCTCAATAAAACTATGTTAGG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR TCA 72 bp GCTACCTCTTCCCAGCTGTGTGTGTTTCCCTCCTTCTaGGTCCACAGTATCAACAATGGAGGACAGACTCTC +
Preference number: 3 (lower is better)
Translates to: ATSSQLCVFPSF*VHSINNGGQTL
Trigger: GAGAGTCTGTCCTCCATTGTTGATACTGTGGACTCAGAAGGAGGGAAACACACACAGCTGGGAAGAGGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
3UTR GCA 72 bp CAGACTGAGAGCCCCAGAAGACATATCTTTCTTAGATaGCCACTGTCCCCATGTCCAGCACACACTAGGTAC +
Preference number: 3 (lower is better)
Translates to: QTESPRRHIFLR*PLSPCPAHTRY
Trigger: GTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCTGGGGCTCTCAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
3UTR-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACCTAACATAGTTTTATaGAGCCCCTACTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQPNIVL*SPYCVS
Trigger: AGAAACACAGTAGGGGCTCAATAAAACTATGTTAGG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCCTAACATAGTTTTATaGAGCCCCTACTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGPNIVL*SPYCVS
Trigger: AGAAACACAGTAGGGGCTCAATAAAACTATGTTAGG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CCA 72 bp ACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTaGGTCACAGATAGCATCTTCTTATTCTGTTGGCTT +
Preference number: 3 (lower is better)
Translates to: TPVGSVRVRPSC*VTDSIFLFCWL
Trigger: AAGCCAACAGAATAAGAAGATGCTATCTGTGACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
3UTR-3UTR CAA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCAACCTGACTTTCTGCTaGCCTTGTCTGGCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGNLTFC*PCLALF
Trigger: GAAGAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACCTAACATAGTTTTATaGAGCCCCTACTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGPNIVL*SPYCVS
Trigger: AGAAACACAGTAGGGGCTCAATAAAACTATGTTAGG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR TCA 72 bp AACTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTaGGACCTTCTTGCTGGGTCACAGATAGCATCTTCT +
Preference number: 3 (lower is better)
Translates to: NSKAKHQWVLCV*DLLAGSQIASS
Trigger: AGAAGATGCTATCTGTGACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
3UTR-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCCTAACATAGTTTTATaGAGCCCCTACTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLPNIVL*SPYCVS
Trigger: AGAAACACAGTAGGGGCTCAATAAAACTATGTTAGG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR-3UTR CAA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAAACCTGACTTTCTGCTaGCCTTGTCTGGCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQNLTFC*PCLALF
Trigger: GAAGAGGGCCAGACAAGGCAAGCAGAAAGTCAGGTT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR TCA 72 bp AATGTAATGTTGACAGATGAAGTTCCACAGACAGGATaGTGGCTTATGTACAGGTTATTGCTGACAGTTCTA +
Preference number: 3 (lower is better)
Translates to: NVMLTDEVPQTG*WLMYRLLLTVL
Trigger: TAGAACTGTCAGCAATAACCTGTACATAAGCCATCATCCTGTCTGTGGAACTTCATCTGTCAACATTACATT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR GCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTGCCTCGGCCTGAGGTaGTGGCCTCCGTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLCLGLR*WPPSPR
Trigger: CCGGGGAGACGGAGGCCAGCACCTCAGGCCGAGGCA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCGGTCGGAGCGCGGGATaGCCAGACGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLGRSAG*PDAAWA
Trigger: TGCCCATGCTGCGTCTGGTCATCCCGCGCTCCGACC...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCCTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGT +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLLHLGS*GPRTGR
Trigger: ACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAG...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGCCTCGGCCTGAGGTaGTGGCCTCCGTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACCLGLR*WPPSPR
Trigger: CCGGGGAGACGGAGGCCAGCACCTCAGGCCGAGGCA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCCTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACLSASA*GAGLRL
Trigger: GAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAG...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GACAGACTCTCCCATGGCCCCACGGCTGGAGCTGGCTGTGCGGAGTGGGAGGTGGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DRLSHGPTAGAGCAEWEVEAAAL*FRAWVH
Trigger: GTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTC...CACCTCCCACTCCGCACAGCCAGCTCCAGCCGTGGGGCCATGGGAGAGTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACSLAAG*GSVVLR
Trigger: TCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCAGCGCCGTGAGCGCTTaGTGCAGCTGGCGCACGTTG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLSAVSA*CSWRTL
Trigger: CAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACGVLPP*LPWLAK
Trigger: CTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCGGGCCGATGGGGTGCTaGTTAACCAGGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLGPMGC*LTRARW
Trigger: CCACCTGGCCCTGGTTAACCAGCACCCCATCGGCCC...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCCTCGGCCTGAGGTGCTaGCCTCCGTCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACLGLRC*PPSPRH
Trigger: ATGCCGGGGAGACGGAGGCCAGCACCTCAGGCCGAG...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCGCTCAGCAGCGCCGTaGGCGCTTGGTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPRSAAP*ALGAAG
Trigger: GCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCGCTCAGCAGCGCCGTaGGCGCTTGGTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCRSAAP*ALGAAG
Trigger: GCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGCCGTGAGCGCTTGGTaGAGCTGGCGCACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACAVSAW*SWRTLA
Trigger: TGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGTCCACGGTGGTACGTaGGTGGGGCAGCCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACVHGGT*VGQPSD
Trigger: GTCGGAAGGCTGCCCCACGCACGTACCACCGTGGAC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCATGGTGGCGCGCTCCTaGTCTGTCAGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLMVARS*SVSRCL
Trigger: CAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCAT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTGCCTCGGCCTGAGGTaGTGGCCTCCGTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPCLGLR*WPPSPR
Trigger: CCGGGGAGACGGAGGCCAGCACCTCAGGCCGAGGCA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCAGCCCAGCGAGCCGGTaGAGGACGAGCTCACCGACA +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACSPASR*RTSSPT
Trigger: TGTCGGTGAGCTCGTCCTCCACCGGCTCGCTGGGCT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCAGCGCCGTGAGCGCTTaGTGCAGCTGGCGCACGTTG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACSAVSA*CSWRTL
Trigger: CAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGAGCCCTCGTGGGCCTTaGCGCGCCGCAGGCTCACGA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLSPRGP*RAAGSR
Trigger: TCGTGAGCCTGCGGCGCGCCAAGGCCCACGAGGGCT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAGCCCTCGTGGGCCTTaGCGCGCCGCAGGCTCACGA +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGSPRGP*RAAGSR
Trigger: TCGTGAGCCTGCGGCGCGCCAAGGCCCACGAGGGCT...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGGGCCGATGGGGTGCTaGTTAACCAGGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACGPMGC*LTRARW
Trigger: CCACCTGGCCCTGGTTAACCAGCACCCCATCGGCCC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTCACACGGACCAGGGTaGACGTTGGCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLSHGPG*TLAPAG
Trigger: GCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCATCCTGGGCAGAGGCTaGCGTGTGTTGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACILGRG*RVLAPP
Trigger: GGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGAT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGCAGCAGACGCCGCTTaGCCGGGCTGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLAADAA*PGCPAG
Trigger: TCCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGGCAGCAGACGCCGCTTaGCCGGGCTGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGAADAA*PGCPAG
Trigger: TCCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGC...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTGGTCGGAGCGCGGGATaGCCAGACGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPGRSAG*PDAAWA
Trigger: TGCCCATGCTGCGTCTGGTCATCCCGCGCTCCGACC...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGAGCCCCCGCGGATGCTaGAGCCCAAGCCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVSPRGC*SPSPRG
Trigger: CCCACGAGGGCTTGGGCTTCAGCATCCGCGGGGGCT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGAGCCCCCGCGGATGCTaGAGCCCAAGCCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKSPRGC*SPSPRG
Trigger: CCCACGAGGGCTTGGGCTTCAGCATCCGCGGGGGCT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACEAAAL*FRAWVH
Trigger: GTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCAGCAGAAGACAGAGGTaGGGGGTCCTCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACSRRQR*GVLPPW
Trigger: CCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSLAAG*GSVVLR
Trigger: TCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLSLAAG*GSVVLR
Trigger: TCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGA...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTGCCTCGGCCTGAGGTaGTGGCCTCCGTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVCLGLR*WPPSPR
Trigger: CCGGGGAGACGGAGGCCAGCACCTCAGGCCGAGGCA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATGCCTCGGCCTGAGGTaGTGGCCTCCGTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRECLGLR*WPPSPR
Trigger: CCGGGGAGACGGAGGCCAGCACCTCAGGCCGAGGCA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCCGGATGCTGTCTGTCTaGCTCGGCCTGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACRMLSV*LGLRCW
Trigger: CCAGCACCTCAGGCCGAGGCAGACAGACAGCATCCG...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGTCGAAGAGCAGCTaGTCGGAGCGCGGGATGACC +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACWSKSS*SERGMT
Trigger: GGTCATCCCGCGCTCCGACCAGCTGCTCTTCGACCA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAAAGCCCAAGCCCTCGTaGGCCTTGGCGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREKPKPS*ALARRR
Trigger: CCTGCGGCGCGCCAAGGCCCACGAGGGCTTGGGCTT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGAAGCCCAAGCCCTCGTaGGCCTTGGCGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVKPKPS*ALARRR
Trigger: CCTGCGGCGCGCCAAGGCCCACGAGGGCTTGGGCTT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCTGCTCAGGGTCACCTaGGAGCCGGCTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCLLRVT*EPAGPL
Trigger: CAAGGGCCCAGCCGGCTCCCAGGTGACCCTGAGCAG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGCTGCTCAGGGTCACCTaGGAGCCGGCTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLLLRVT*EPAGPL
Trigger: CAAGGGCCCAGCCGGCTCCCAGGTGACCCTGAGCAG...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTGCCGTGGCTGCCTGTaGATGAGCCTGTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLCRGCL*MSLCRC
Trigger: ACAGCGACACAGGCTCATCCACAGGCAGCCACGGCA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCGVLPP*LPWLAK
Trigger: CTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGGCAGGCCCCAGCTCCTaGGGTCTCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGAGPSS*GLCRRA
Trigger: AGCCCTCCTGCAGAGACCCCAGGAGCTGGGGCCTGC...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGCAGGCCCCAGCTCCTaGGGTCTCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLAGPSS*GLCRRA
Trigger: AGCCCTCCTGCAGAGACCCCAGGAGCTGGGGCCTGC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGCAGGCCCCAGCTCCTaGGGTCTCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCAGPSS*GLCRRA
Trigger: AGCCCTCCTGCAGAGACCCCAGGAGCTGGGGCCTGC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCTCGGCCTGAGGTGCTaGCCTCCGTCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPLGLRC*PPSPRH
Trigger: ATGCCGGGGAGACGGAGGCCAGCACCTCAGGCCGAG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCACCGCCCTCAATaGCGATGCCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACWHRPQ*RCPVWL
Trigger: CAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCGCTCAGCAGCGCCGTaGGCGCTTGGTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGRSAAP*ALGAAG
Trigger: GCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGGCAGCAGACGCCGCTTaGCCGGGCTGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVAADAA*PGCPAG
Trigger: TCCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGC...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGGGTCGGAGCGCGGGATaGCCAGACGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKGRSAG*PDAAWA
Trigger: TGCCCATGCTGCGTCTGGTCATCCCGCGCTCCGACC...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCAGCCCCCGCGGATGCTaGAGCCCAAGCCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGSPRGC*SPSPRG
Trigger: CCCACGAGGGCTTGGGCTTCAGCATCCGCGGGGGCT...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGT +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVLHLGS*GPRTGR
Trigger: ACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTCTGGTCTCCAACCTTaGGGCCGCTGCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLSGLQP*GRCSLL
Trigger: AAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLGLPTV*ELRECG
Trigger: TCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACC...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKLSASA*GAGLRL
Trigger: GAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAG...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELSASA*GAGLRL
Trigger: GAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVLSASA*GAGLRL
Trigger: GAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTGCAGGACGCGCAGGGTaGGCACCAGGTCGAAGACGT +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPAGRAG*APGRRR
Trigger: ACGTCTTCGACCTGGTGCGCACCCTGCGCGTCCTGC...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCCTAGAGACACGTAGATaGCCACGCCGTGTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLLETRR*PRRVPS
Trigger: GCTCGGAACACGGCGTGGGCATCTACGTGTCTCTAG...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGAGGGAGGGGATGTaGTTCGACCCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACWREGM*FDPVGP
Trigger: TGGACCCACAGGGTCGAAGCACATCCCCTCCCTCCA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCACGCTGTCTCAGGGTaGTGCCATGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPHAVSG*CHGAGA
Trigger: TGCCCCAGCCCCATGGCAGCACCCTGAGACAGCGTG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCACGCTGTCTCAGGGTaGTGCCATGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCHAVSG*CHGAGA
Trigger: TGCCCCAGCCCCATGGCAGCACCCTGAGACAGCGTG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCACGCTGTCTCAGGGTaGTGCCATGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGHAVSG*CHGAGA
Trigger: TGCCCCAGCCCCATGGCAGCACCCTGAGACAGCGTG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGTCCACGGTGGTACGTaGGTGGGGCAGCCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCVHGGT*VGQPSD
Trigger: GTCGGAAGGCTGCCCCACGCACGTACCACCGTGGAC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCCGGGAGAGCGTTGGTaGTGCCCTGGGTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPPGERW*CPGWSH
Trigger: GTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVSLAAG*GSVVLR
Trigger: TCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTAGCGCCGTGAGCGCTTaGTGCAGCTGGCGCACGTTG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCSAVSA*CSWRTL
Trigger: CAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTAGCGCCGTGAGCGCTTaGTGCAGCTGGCGCACGTTG +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSAVSA*CSWRTL
Trigger: CAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCT...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTGCCTGTAGGGGGTGGTaGCTGGCAGGTAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPACRGW*LAGRGP
Trigger: AGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGC...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCAGCCCTCGTGGGCCTTaGCGCGCCGCAGGCTCACGA +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGSPRGP*RAAGSR
Trigger: TCGTGAGCCTGCGGCGCGCCAAGGCCCACGAGGGCT...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAAGCCCAAGCCCTCGTaGGCCTTGGCGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQKPKPS*ALARRR
Trigger: CCTGCGGCGCGCCAAGGCCCACGAGGGCTTGGGCTT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTGTCCAGCGGCTTTCTaGAACTGGGGTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLCPAAF*NWGWHG
Trigger: CCCATGCCAACCCCAGTTCCAGAAAGCCGCTGGACA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGGGGCCGATGGGGTGCTaGTTAACCAGGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGGPMGC*LTRARW
Trigger: CCACCTGGCCCTGGTTAACCAGCACCCCATCGGCCC...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGGGCCGATGGGGTGCTaGTTAACCAGGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLGPMGC*LTRARW
Trigger: CCACCTGGCCCTGGTTAACCAGCACCCCATCGGCCC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCGCTCTTCAGGTGAGGTaGGGACTGGACTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLALQVR*GLDSRE
Trigger: TTCCCTCGAGTCCAGTCCCCACCTCACCTGAAGAGC...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGATCCTGGGCAGAGGCTaGCGTGTGTTGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLILGRG*RVLAPP
Trigger: GGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGAT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTATCCTGGGCAGAGGCTaGCGTGTGTTGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCILGRG*RVLAPP
Trigger: GGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGAT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQLSASA*GAGLRL
Trigger: GAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTTACGTGGCCCACCTTaGGCTGTCCACAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLLRGPP*AVHSYG
Trigger: CCCATAACTGTGGACAGCTCAAGGTGGGCCACGTAA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCCAGGTCGAAGACGTTaGGGCGCGCGTGGTACGCGT +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVPGRRR*GARGTR
Trigger: ACGCGTACCACGCGCGCCGCAACGTCTTCGACCTGG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACCAGGTCGAAGACGTTaGGGCGCGCGTGGTACGCGT +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREPGRRR*GARGTR
Trigger: ACGCGTACCACGCGCGCCGCAACGTCTTCGACCTGG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCAACCCTTCCTTCTCTaGCAGGGAGCCCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCQPFLL*QGARLH
Trigger: GTGGAGCCGGGCTCCCTGGCAGAGAAGGAAGGGTTG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTCCACGGTGGTACGTaGGTGGGGCAGCCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREVHGGT*VGQPSD
Trigger: GTCGGAAGGCTGCCCCACGCACGTACCACCGTGGAC...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCCGGGAGAGCGTTGGTaGTGCCCTGGGTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVPGERW*CPGWSH
Trigger: GTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCCGGGAGAGCGTTGGTaGTGCCCTGGGTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKPGERW*CPGWSH
Trigger: GTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGG...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTAGCAGAAGACAGAGGTaGGGGGTCCTCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCSRRQR*GVLPPW
Trigger: CCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGAGCAGAAGACAGAGGTaGGGGGTCCTCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLSRRQR*GVLPPW
Trigger: CCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTAGCAGAAGACAGAGGTaGGGGGTCCTCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSRRQR*GVLPPW
Trigger: CCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCT...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGSLAAG*GSVVLR
Trigger: TCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTAAGGGGCCGATGGGGTaGTGGTTAACCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCKGPMG*WLTRAR
Trigger: CCTGGCCCTGGTTAACCAGCACCCCATCGGCCCCTT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTCCACCAGAACAAAGTaGTGGTTTGCACCCACGGCG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLSTRTK*WFAPTA
Trigger: CGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLSLSGR*TSTRTK
Trigger: CTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCGGATGCTGTCTGTCTaGCTCGGCCTGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGRMLSV*LGLRCW
Trigger: CCAGCACCTCAGGCCGAGGCAGACAGACAGCATCCG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCRAASL*SLPRSV
Trigger: GACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGRAASL*SLPRSV
Trigger: GACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTAGCGCTTGGTGCAGCTaGCGCACGTTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSAWCS*RTLADS
Trigger: GCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCT...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTGGTCGAAGAGCAGCTaGTCGGAGCGCGGGATGACC +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLWSKSS*SERGMT
Trigger: GGTCATCCCGCGCTCCGACCAGCTGCTCTTCGACCA...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGTGGTCGAAGAGCAGCTaGTCGGAGCGCGGGATGACC +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGWSKSS*SERGMT
Trigger: GGTCATCCCGCGCTCCGACCAGCTGCTCTTCGACCA...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGTAGGGGGTGGTGGCTaGCAGGTAGAGGCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQVGGGG*QVEALG
Trigger: GCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTAC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGGCTGCCTGTAGGGGGTaGTGGCTGGCAGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVAACRG*WLAGRG
Trigger: GCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGC...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTGTGCTTCGACCCTGTaGGTCCACCCAGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLCASTL*VHPGVD
Trigger: ATCTACACCTGGGTGGACCCACAGGGTCGAAGCACA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCAACTGGCGATCCACTTaGTCTGGTCCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLNWRST*SGPRWY
Trigger: GTACCACCGTGGACCAGACCAAGTGGATCGCCAGTT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTGGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTATCCTTGGGGCTGGGGGTCTGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGGLAAPRSQLYPWGWGSVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...AGACCCCCAGCCCCAAGGATAAAGCTGGCTCCTCGGAGCAGCAAGGCCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQGVLPP*LPWLAK
Trigger: CTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGGVLPP*LPWLAK
Trigger: CTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACAAFWN*GWHGRW
Trigger: CCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGTCACACGGACCAGGGTaGACGTTGGCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGSHGPG*TLAPAG
Trigger: GCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGA...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTCACACGGACCAGGGTaGACGTTGGCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSHGPG*TLAPAG
Trigger: GCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTCACACGGACCAGGGTaGACGTTGGCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLSHGPG*TLAPAG
Trigger: GCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGA...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGTGGCACCGCCCTCAATaGCGATGCCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGWHRPQ*RCPVWL
Trigger: CAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCA...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTGGCACCGCCCTCAATaGCGATGCCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLWHRPQ*RCPVWL
Trigger: CAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCA...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGATCCTGGGCAGAGGCTaGCGTGTGTTGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVILGRG*RVLAPP
Trigger: GGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGAT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAATCCTGGGCAGAGGCTaGCGTGTGTTGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREILGRG*RVLAPP
Trigger: GGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGAT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
3UTR CAA 72 bp GGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTATCCTaGGGGCTGGGGGTCTCCATAGGTCAGCAACTTGGG +
Preference number: 4 (lower is better)
Translates to: GRPCCSEEPALS*GLGVSIGQQLG
Trigger: CCCAAGTTGCTGACCTATGGAGACCCCCAGCCCCAAGGATAAAGCTGGCTCCTCGGAGCAGCAAGGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
CDS-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFLHLGS*GPRTGR
Trigger: ACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGGTCCCCTGGAAACCTaGGACCAGACCCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLGPLET*DQTLLS
Trigger: ACTCAGCAGGGTCTGGTCTCAGGTTTCCAGGGGACC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACAACCCTTCCTTCTCTaGCAGGGAGCCCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREQPFLL*QGARLH
Trigger: GTGGAGCCGGGCTCCCTGGCAGAGAAGGAAGGGTTG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTGGACTTTCTCTCCCAGCAGGTTCTCGAGCCCACGGATAGGACAACACCATGCCACGCTGTCTCAGGGTaGTGCCATGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VDFLSQQVLEPTDRTTPCHAVSG*CHGAGA
Trigger: TGCCCCAGCCCCATGGCAGCACCCTGAGACAGCGTG...GCATGGTGTTGTCCTATCCGTGGGCTCGAGAACCTGCTGGGAGAGAAAGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGTCCACGGTGGTACGTaGGTGGGGCAGCCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGVHGGT*VGQPSD
Trigger: GTCGGAAGGCTGCCCCACGCACGTACCACCGTGGAC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTGCTCTGTCAGCAGGTaGCTGGCTTGGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPCSVSR*LAWSSS
Trigger: GCTGGACGACCAAGCCAGGCACCTGCTGACAGAGCA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGATGGTGGCGCGCTCCTaGTCTGTCAGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVMVARS*SVSRCL
Trigger: CAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCAT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCCTCCACAGAGATGGTaGCACCACGGTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCPPQRW*HHGTGP
Trigger: TGGCCCAGTACCGTGGTGGCACCATCTCTGTGGAGG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGCCTCCACAGAGATGGTaGCACCACGGTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLPPQRW*HHGTGP
Trigger: TGGCCCAGTACCGTGGTGGCACCATCTCTGTGGAGG...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACCGGGAGAGCGTTGGTaGTGCCCTGGGTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQPGERW*CPGWSH
Trigger: GTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGAGCAGAAGACAGAGGTaGGGGGTCCTCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKSRRQR*GVLPPW
Trigger: CCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTCCACCAGAACAAAGTaGTGGTTTGCACCCACGGCG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACSTRTK*WFAPTA
Trigger: CGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAAGAGTGTGGAGGCTGTaGGAGTCTGGGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRERVWRL*ESGAEP
Trigger: GGGCTCTGCCCCAGACTCGCACAGCCTCCACACTCT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGAGAGTGTGGAGGCTGTaGGAGTCTGGGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKRVWRL*ESGAEP
Trigger: GGGCTCTGCCCCAGACTCGCACAGCCTCCACACTCT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGAGAGTGTGGAGGCTGTaGGAGTCTGGGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVRVWRL*ESGAEP
Trigger: GGGCTCTGCCCCAGACTCGCACAGCCTCCACACTCT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCGGATGCTGTCTGTCTaGCTCGGCCTGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVRMLSV*LGLRCW
Trigger: CCAGCACCTCAGGCCGAGGCAGACAGACAGCATCCG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVRAASL*SLPRSV
Trigger: GACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACCCTCGGCCGTGTACTaGTCGAAGAGCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREPSAVY*SKSSWS
Trigger: CGACCAGCTGCTCTTCGACCAGTACACGGCCGAGGG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCCCTCGGCCGTGTACTaGTCGAAGAGCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKPSAVY*SKSSWS
Trigger: CGACCAGCTGCTCTTCGACCAGTACACGGCCGAGGG...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGCTGCCTGTAGGGGGTaGTGGCTGGCAGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGAACRG*WLAGRG
Trigger: GCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTTGACAGCCTCCGCGTaGGTCACCCGGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPLTASA*VTRARD
Trigger: ATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGTTGACAGCCTCCGCGTaGGTCACCCGGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGLTASA*VTRARD
Trigger: ATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAA...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCAACTGGCGATCCACTTaGTCTGGTCCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACNWRST*SGPRWY
Trigger: GTACCACCGTGGACCAGACCAAGTGGATCGCCAGTT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGCCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLPRSGN*RSTWSG
Trigger: ACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGG...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCACCTGGGAGCCGGCTaGGCCCTTGTAAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCHLGAG*ALVKSW
Trigger: CCAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCACCTGGGAGCCGGCTaGGCCCTTGTAAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGHLGAG*ALVKSW
Trigger: CCAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCTGTCAGCAGGTGCCTaGCTTGGTCGTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGLSAGA*LGRPAV
Trigger: CACTGCTGGACGACCAAGCCAGGCACCTGCTGACAG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTTGGCCTCCACAGAGATaGTGCCACCACGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCWPPQR*CHHGTG
Trigger: CCCAGTACCGTGGTGGCACCATCTCTGTGGAGGCCA...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCAAGCGGTCCAGGTCTTaGGGTGAGATGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLKRSRS*GEMMLL
Trigger: GAGAAGCATCATCTCACCCCAAGACCTGGACCGCTT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AGGGTCCTCAGGAGAAGCTGGGAGGCCTTGCTGCTCCGAGGAGCCAGCTTTATCTGCCGTGGCTGCCTGTaGATGAGCCTGTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RVLRRSWEALLLRGASFICRGCL*MSLCRC
Trigger: ACAGCGACACAGGCTCATCCACAGGCAGCCACGGCA...GATAAAGCTGGCTCCTCGGAGCAGCAAGGCCTCCCAGCTTCTCCTGAGGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGGGCCGATGGGGTGCTaGTTAACCAGGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGGPMGC*LTRARW
Trigger: CCACCTGGCCCTGGTTAACCAGCACCCCATCGGCCC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTCACACGGACCAGGGTaGACGTTGGCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVSHGPG*TLAPAG
Trigger: GCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGATGCCCAGTGTaGCTGCACTTTTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACWRCPV*LHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAATCCTGGGCAGAGGCTaGCGTGTGTTGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQILGRG*RVLAPP
Trigger: GGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGAT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCCTAGAGATTTATCGTTaGCGCGCAGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLLEIYR*RAESGP
Trigger: GGGACCAGATTCTGCGCGTCAACGATAAATCTCTAG...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGGTCTTGGGGTGAGATaGTGCTTCTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACGLGVR*CFSPQT
Trigger: TGTCTGAGGTGAGAAGCATCATCTCACCCCAAGACC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCCACTGTCTGAGAGCTaGGAGAGTGTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGPLSES*ESVEAV
Trigger: CACAGCCTCCACACTCTCTCAGCTCTCAGACAGTGG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLGLPTV*ELRECG
Trigger: TCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPLLAEL*RSWAEA
Trigger: AGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGCTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLLLAEL*RSWAEA
Trigger: AGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAG...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGCCGTGAGCGCTTGGTaGAGCTGGCGCACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFAVSAW*SWRTLA
Trigger: TGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCCAGGTCGAAGACGTTaGGGCGCGCGTGGTACGCGT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFPGRRR*GARGTR
Trigger: ACGCGTACCACGCGCGCCGCAACGTCTTCGACCTGG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCTAGAGACACGTAGATaGCCACGCCGTGTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCLETRR*PRRVPS
Trigger: GCTCGGAACACGGCGTGGGCATCTACGTGTCTCTAG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTGGAGGGAGGGGATGTaGTTCGACCCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKWREGM*FDPVGP
Trigger: TGGACCCACAGGGTCGAAGCACATCCCCTCCCTCCA...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAG +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKAKAVL*STSDRE
Trigger: CTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGC...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGTGCTGAGAAGACAATaGCTGAGTGGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACVLRRQ*LSGQQK
Trigger: CTTCTGCTGCCCACTCAGGCATTGTCTTCTCAGCAC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCAAGGGGCCGATGGGGTaGTGGTTAACCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGKGPMG*WLTRAR
Trigger: CCTGGCCCTGGTTAACCAGCACCCCATCGGCCCCTT...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGAGCTCCTGGGGTCTCTaGAGGAGGGCTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKSSWGL*RRALQV
Trigger: CACCTGAAGAGCCCTCCTGCAGAGACCCCAGGAGCT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATGCCTCGGCCTGAGGTaGTGGCCTCCGTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGCLGLR*WPPSPR
Trigger: CCGGGGAGACGGAGGCCAGCACCTCAGGCCGAGGCA...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACGGATGCTGTCTGTCTaGCTCGGCCTGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQRMLSV*LGLRCW
Trigger: CCAGCACCTCAGGCCGAGGCAGACAGACAGCATCCG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGCAGCTGGCGCACGTTaGCAGACAGCAGCCGCAACC +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFAAGAR*QTAAAT
Trigger: GGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACCCTCGGCCGTGTACTaGTCGAAGAGCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQPSAVY*SKSSWS
Trigger: CGACCAGCTGCTCTTCGACCAGTACACGGCCGAGGG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGCCTGTAGGGGGTGGTaGCTGGCAGGTAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFACRGW*LAGRGP
Trigger: AGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELTRRI*SPTRNP
Trigger: AGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVLTRRI*SPTRNP
Trigger: AGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCCTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTA +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACLCFRA*VHTSDV
Trigger: TACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAG...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVPRSGN*RSTWSG
Trigger: ACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCACCTGGGAGCCGGCTaGGCCCTTGTAAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVHLGAG*ALVKSW
Trigger: CCAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTGTCAGCAGGTGCCTaGCTTGGTCGTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELSAGA*LGRPAV
Trigger: CACTGCTGGACGACCAAGCCAGGCACCTGCTGACAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTGGCCTCCACAGAGATaGTGCCACCACGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVWPPQR*CHHGTG
Trigger: CCCAGTACCGTGGTGGCACCATCTCTGTGGAGGCCA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTGGCCTCCACAGAGATaGTGCCACCACGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKWPPQR*CHHGTG
Trigger: CCCAGTACCGTGGTGGCACCATCTCTGTGGAGGCCA...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTGCCGTGGCTGCCTGTaGATGAGCCTGTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKCRGCL*MSLCRC
Trigger: ACAGCGACACAGGCTCATCCACAGGCAGCCACGGCA...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTGGTGGGGGAGGAGGTaGCTTGATACCAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPWWGRR*LDTRQI
Trigger: GATCTGCCTGGTATCAAGCCACCTCCTCCCCCACCA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGTGGTGGGGGAGGAGGTaGCTTGATACCAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGWWGRR*LDTRQI
Trigger: GATCTGCCTGGTATCAAGCCACCTCCTCCCCCACCA...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTTCTGGAACTGGGGTTaGCATGGGAGATGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACFWNWG*HGRWRH
Trigger: ATGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCAAFWN*GWHGRW
Trigger: CCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTGTCCAGCGGCTTTCTaGAACTGGGGTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPCPAAF*NWGWHG
Trigger: CCCATGCCAACCCCAGTTCCAGAAAGCCGCTGGACA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTGTCCAGCGGCTTTCTaGAACTGGGGTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLCPAAF*NWGWHG
Trigger: CCCATGCCAACCCCAGTTCCAGAAAGCCGCTGGACA...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGGGCCGATGGGGTGCTaGTTAACCAGGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFGPMGC*LTRARW
Trigger: CCACCTGGCCCTGGTTAACCAGCACCCCATCGGCCC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGCTCTTCAGGTGAGGTaGGGACTGGACTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLALQVR*GLDSRE
Trigger: TTCCCTCGAGTCCAGTCCCCACCTCACCTGAAGAGC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATGGCACCGCCCTCAATaGCGATGCCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQWHRPQ*RCPVWL
Trigger: CAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLTSRIT*PTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTCTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCLGPHQ*CKCQGR
Trigger: ACGGCCTTGGCATTTACATCACTGGTGTGGACCCAG...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAGCAGTGCACGAGTCTaGTTCCCCAGGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQSSARV*FPRLLR
Trigger: CCTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGTCCAGGTCTTGGGGTaGGATGATGCTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCVQVLG*DDASHL
Trigger: GAGGTGAGAAGCATCATCTCACCCCAAGACCTGGAC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTAGAGACACGTAGATaGCCACGCCGTGTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELETRR*PRRVPS
Trigger: GCTCGGAACACGGCGTGGGCATCTACGTGTCTCTAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTGGAGGGAGGGGATGTaGTTCGACCCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGWREGM*FDPVGP
Trigger: TGGACCCACAGGGTCGAAGCACATCCCCTCCCTCCA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATGGAGGGAGGGGATGTaGTTCGACCCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQWREGM*FDPVGP
Trigger: TGGACCCACAGGGTCGAAGCACATCCCCTCCCTCCA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFEAAAL*FRAWVH
Trigger: GTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGACCGTCAGGATGAGGTaGCGGGATGACTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVTVRMR*RDDLSS
Trigger: GCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGSLAAG*GSVVLR
Trigger: TCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGA...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCAAGGGGCCGATGGGGTaGTGGTTAACCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFKGPMG*WLTRAR
Trigger: CCTGGCCCTGGTTAACCAGCACCCCATCGGCCCCTT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCAGCTCCTGGGGTCTCTaGAGGAGGGCTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGSSWGL*RRALQV
Trigger: CACCTGAAGAGCCCTCCTGCAGAGACCCCAGGAGCT...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTCCACCAGAACAAAGTaGTGGTTTGCACCCACGGCG +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSTRTK*WFAPTA
Trigger: CGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTTCCACCAGAACAAAGTaGTGGTTTGCACCCACGGCG +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCSTRTK*WFAPTA
Trigger: CGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGA...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSLSGR*TSTRTK
Trigger: CTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCAGAGTGTGGAGGCTGTaGGAGTCTGGGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFRVWRL*ESGAEP
Trigger: GGGCTCTGCCCCAGACTCGCACAGCCTCCACACTCT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCGGATGCTGTCTGTCTaGCTCGGCCTGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFRMLSV*LGLRCW
Trigger: CCAGCACCTCAGGCCGAGGCAGACAGACAGCATCCG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCTTGTTCTTAGCGGATaGTGTCTGTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPLVLSG*CLSASA
Trigger: GGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGCTTGTTCTTAGCGGATaGTGTCTGTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLLVLSG*CLSASA
Trigger: GGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAG...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGATGCCCAGTGTGGCTaGACTTTTCCTCACACGGAC +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLDAQCG*TFPHTD
Trigger: GTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGATGCCCAGTGTGGCTaGACTTTTCCTCACACGGAC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCDAQCG*TFPHTD
Trigger: GTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTAGGGGGTGGTGGCTaGCAGGTAGAGGCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGVGGGG*QVEALG
Trigger: GCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTAC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTTGACAGCCTCCGCGTaGGTCACCCGGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLTASA*VTRARD
Trigger: ATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTTGTGCTTCGACCCTGTaGGTCCACCCAGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCCASTL*VHPGVD
Trigger: ATCTACACCTGGGTGGACCCACAGGGTCGAAGCACA...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGCGATCCACTTGGTCTaGTCCACGGTGGTACGTGCG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGAIHLV*STVVRA
Trigger: CGCACGTACCACCGTGGACCAGACCAAGTGGATCGC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGATCCACTTGGTCTaGTCCACGGTGGTACGTGCG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQAIHLV*STVVRA
Trigger: CGCACGTACCACCGTGGACCAGACCAAGTGGATCGC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTAACTGGCGATCCACTTaGTCTGGTCCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPNWRST*SGPRWY
Trigger: GTACCACCGTGGACCAGACCAAGTGGATCGCCAGTT...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACACCTGGGAGCCGGCTaGGCCCTTGTAAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQHLGAG*ALVKSW
Trigger: CCAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTGCCGTGGCTGCCTGTaGATGAGCCTGTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGCRGCL*MSLCRC
Trigger: ACAGCGACACAGGCTCATCCACAGGCAGCCACGGCA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTGGTGGGGGAGGAGGTaGCTTGATACCAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVWWGRR*LDTRQI
Trigger: GATCTGCCTGGTATCAAGCCACCTCCTCCCCCACCA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGGVLPP*LPWLAK
Trigger: CTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVAAFWN*GWHGRW
Trigger: CCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGC...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATGTCCAGCGGCTTTCTaGAACTGGGGTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRECPAAF*NWGWHG
Trigger: CCCATGCCAACCCCAGTTCCAGAAAGCCGCTGGACA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTTAACCAGGGCCAGGTaGGTGTCCAGCGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVLTRAR*VSSGFL
Trigger: CAGAAAGCCGCTGGACACCCACCTGGCCCTGGTTAA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGGCTCTTCAGGTGAGGTaGGGACTGGACTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVALQVR*GLDSRE
Trigger: TTCCCTCGAGTCCAGTCCCCACCTCACCTGAAGAGC...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGGCTCTTCAGGTGAGGTaGGGACTGGACTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKALQVR*GLDSRE
Trigger: TTCCCTCGAGTCCAGTCCCCACCTCACCTGAAGAGC...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCTCACACGGACCAGGGTaGACGTTGGCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFSHGPG*TLAPAG
Trigger: GCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGA...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTGGCGATGCCCAGTGTaGCTGCACTTTTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLWRCPV*LHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACTSRIT*PTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACGCAGCAGACGCCGCTTaGCCGGGCTGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNAADAA*PGCPAG
Trigger: TCCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGC...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCAAGCCCCCGCGGATGCTaGAGCCCAAGCCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPSPRGC*SPSPRG
Trigger: CCCACGAGGGCTTGGGCTTCAGCATCCGCGGGGGCT...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTGGGATACGCCCAGCTaGGTATACAGACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKWDTPS*VYRQHQ
Trigger: CTGGTGCTGTCTGTATACTCAGCTGGGCGTATCCCA...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GTTTCCCTCCTTCTGAGTCCACAGTATCAACAATGGAGGACAGACTCTCCCATGCTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGT +
Preference number: 4 (lower is better)
Translates to: VSLLLSPQYQQWRTDSPMLHLGS*GPRTGR
Trigger: ACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAG...CATGGGAGAGTCTGTCCTCCATTGTTGATACTGTGGACTCAGAAGGAGGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
CDS-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATCTGGTCTCCAACCTTaGGGCCGCTGCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQSGLQP*GRCSLL
Trigger: AAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTACTCAAACAGTGCCATaGCCATGGCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPTQTVP*PWPPQR
Trigger: TCTCTGTGGAGGCCATGGTCATGGCACTGTTTGAGT...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGACTCAAACAGTGCCATaGCCATGGCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLTQTVP*PWPPQR
Trigger: TCTCTGTGGAGGCCATGGTCATGGCACTGTTTGAGT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGGTCTTGGGGTGAGATaGTGCTTCTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCGLGVR*CFSPQT
Trigger: TGTCTGAGGTGAGAAGCATCATCTCACCCCAAGACC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGGTCCAGGTCTTGGGGTaGGATGATGCTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKVQVLG*DDASHL
Trigger: GAGGTGAGAAGCATCATCTCACCCCAAGACCTGGAC...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGGTCCAGGTCTTGGGGTaGGATGATGCTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVVQVLG*DDASHL
Trigger: GAGGTGAGAAGCATCATCTCACCCCAAGACCTGGAC...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCCACTGTCTGAGAGCTaGGAGAGTGTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGPLSES*ESVEAV
Trigger: CACAGCCTCCACACTCTCTCAGCTCTCAGACAGTGG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLLAEL*RSWAEA
Trigger: AGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQLLAEL*RSWAEA
Trigger: AGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATTACGTGGCCCACCTTaGGCTGTCCACAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELRGPP*AVHSYG
Trigger: CCCATAACTGTGGACAGCTCAAGGTGGGCCACGTAA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTTACGTGGCCCACCTTaGGCTGTCCACAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVLRGPP*AVHSYG
Trigger: CCCATAACTGTGGACAGCTCAAGGTGGGCCACGTAA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACCAGGTCGAAGACGTTaGGGCGCGCGTGGTACGCGT +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGPGRRR*GARGTR
Trigger: ACGCGTACCACGCGCGCCGCAACGTCTTCGACCTGG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCCTTGAGCAGCTTCACTaGCTCATCATGCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACLEQLH*LIMQDV
Trigger: AACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAG...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAACCGTCAGGATGAGGTaGCGGGATGACTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQTVRMR*RDDLSS
Trigger: GCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCCTCCACAGAGATGGTaGCACCACGGTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFPPQRW*HHGTGP
Trigger: TGGCCCAGTACCGTGGTGGCACCATCTCTGTGGAGG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACCGGGAGAGCGTTGGTaGTGCCCTGGGTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGPGERW*CPGWSH
Trigger: GTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGTGCTGAGAAGACAATaGCTGAGTGGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLVLRRQ*LSGQQK
Trigger: CTTCTGCTGCCCACTCAGGCATTGTCTTCTCAGCAC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVSLSGR*TSTRTK
Trigger: CTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCTTGTTCTTAGCGGATaGTGTCTGTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVLVLSG*CLSASA
Trigger: GGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTTGTTCTTAGCGGATaGTGTCTGTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKLVLSG*CLSASA
Trigger: GGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAG...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTTGTTCTTAGCGGATaGTGTCTGTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELVLSG*CLSASA
Trigger: GGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAAGCCCAGCGAGCCGGTaGAGGACGAGCTCACCGACA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGSPASR*RTSSPT
Trigger: TGTCGGTGAGCTCGTCCTCCACCGGCTCGCTGGGCT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGAAGCCCAAGCCCTCGTaGGCCTTGGCGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRKPKPS*ALARRR
Trigger: CCTGCGGCGCGCCAAGGCCCACGAGGGCTTGGGCTT...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp AGTCCACAGTATCAACAATGGAGGACAGACTCTCCCATGGCCCCACGGCTGGAGCCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SPQYQQWRTDSPMAPRLEPLCRR*RVLLRS
Trigger: TGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGG...CTCCAGCCGTGGGGCCATGGGAGAGTCTGTCCTCCATTGTTGATACTGTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGAACTGGCGATCCACTTaGTCTGGTCCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVNWRST*SGPRWY
Trigger: GTACCACCGTGGACCAGACCAAGTGGATCGCCAGTT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFPRSGN*RSTWSG
Trigger: ACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCTGCTCAGGGTCACCTaGGAGCCGGCTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLLLRVT*EPAGPL
Trigger: CAAGGGCCCAGCCGGCTCCCAGGTGACCCTGAGCAG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACCTGCTCAGGGTCACCTaGGAGCCGGCTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNLLRVT*EPAGPL
Trigger: CAAGGGCCCAGCCGGCTCCCAGGTGACCCTGAGCAG...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTAAGCGGTCCAGGTCTTaGGGTGAGATGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPKRSRS*GEMMLL
Trigger: GAGAAGCATCATCTCACCCCAAGACCTGGACCGCTT...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCTGCCGTGGCTGCCTGTaGATGAGCCTGTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFCRGCL*MSLCRC
Trigger: ACAGCGACACAGGCTCATCCACAGGCAGCCACGGCA...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATGGTGGGGGAGGAGGTaGCTTGATACCAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQWWGRR*LDTRQI
Trigger: GATCTGCCTGGTATCAAGCCACCTCCTCCCCCACCA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTGGTGGGGGAGGAGGTaGCTTGATACCAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGWWGRR*LDTRQI
Trigger: GATCTGCCTGGTATCAAGCCACCTCCTCCCCCACCA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGGVLPP*LPWLAK
Trigger: CTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGAGATGGAGGCATAAATaGGGGAGGAGGGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLRWRHK*GRRESP
Trigger: AGGACTCTCCCTCCTCCCCCATTTATGCCTCCATCT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAGATGGAGGCATAAATaGGGGAGGAGGGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGRWRHK*GRRESP
Trigger: AGGACTCTCCCTCCTCCCCCATTTATGCCTCCATCT...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTTTCTGGAACTGGGGTTaGCATGGGAGATGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCFWNWG*HGRWRH
Trigger: ATGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAA...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQAAFWN*GWHGRW
Trigger: CCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTGTCCAGCGGCTTTCTaGAACTGGGGTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGCPAAF*NWGWHG
Trigger: CCCATGCCAACCCCAGTTCCAGAAAGCCGCTGGACA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTTAACCAGGGCCAGGTaGGTGTCCAGCGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLTRAR*VSSGFL
Trigger: CAGAAAGCCGCTGGACACCCACCTGGCCCTGGTTAA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGCAGGCCCCAGCTCCTaGGGTCTCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLAGPSS*GLCRRA
Trigger: AGCCCTCCTGCAGAGACCCCAGGAGCTGGGGCCTGC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTACCAGAACAAAGTGCTaGTTTGCACCCACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCTRTKC*FAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGACCAGAACAAAGTGCTaGTTTGCACCCACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLTRTKC*FAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCCTCGGCCTGAGGTGCTaGCCTCCGTCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGLGLRC*PPSPRH
Trigger: ATGCCGGGGAGACGGAGGCCAGCACCTCAGGCCGAG...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCTCGGCCTGAGGTGCTaGCCTCCGTCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLLGLRC*PPSPRH
Trigger: ATGCCGGGGAGACGGAGGCCAGCACCTCAGGCCGAG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTGGCGATGCCCAGTGTaGCTGCACTTTTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVWRCPV*LHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATGGCGATGCCCAGTGTaGCTGCACTTTTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREWRCPV*LHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCAGGTCGGAGCGCGGGATaGCCAGACGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPGRSAG*PDAAWA
Trigger: TGCCCATGCTGCGTCTGGTCATCCCGCGCTCCGACC...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp GAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTCTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGT +
Preference number: 4 (lower is better)
Translates to: EDISFLDAHCPHVQHTLGLHLGS*GPRTGR
Trigger: ACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAG...ACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp GACTTTCTCTCCCAGCAGGTTCTCGAGCCCACGGATAGGACAACACCATGCCTGCTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: DFLSQQVLEPTDRTTPCLLGPHQ*CKCQGR
Trigger: ACGGCCTTGGCATTTACATCACTGGTGTGGACCCAG...CAGGCATGGTGTTGTCCTATCCGTGGGCTCGAGAACCTGCTGGGAGAGAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
CDS-3UTR TCA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCATCATGCAGGATGTTaGGAAAGCTCCGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPHHAGC*ESSAHS
Trigger: TGAATGGGCGGAGCTTTCTCAACATCCTGCATGATG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGCATCATGCAGGATGTTaGGAAAGCTCCGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LTLLVACKASGIGWECKGHHAGC*ESSAHS
Trigger: TGAATGGGCGGAGCTTTCTCAACATCCTGCATGATG...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGACTCAAACAGTGCCATaGCCATGGCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKTQTVP*PWPPQR
Trigger: TCTCTGTGGAGGCCATGGTCATGGCACTGTTTGAGT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGTCCAGGTCTTGGGGTaGGATGATGCTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGVQVLG*DDASHL
Trigger: GAGGTGAGAAGCATCATCTCACCCCAAGACCTGGAC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCCACTGTCTGAGAGCTaGGAGAGTGTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFPLSES*ESVEAV
Trigger: CACAGCCTCCACACTCTCTCAGCTCTCAGACAGTGG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFLLAEL*RSWAEA
Trigger: AGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTTACGTGGCCCACCTTaGGCTGTCCACAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLRGPP*AVHSYG
Trigger: CCCATAACTGTGGACAGCTCAAGGTGGGCCACGTAA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCCACTGTCTGAGAGCTaGGAGAGTGTGGAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFPLSES*ESVEVR
Trigger: TCGCACCTCCACACTCTCTCAGCTCTCAGACAGTGG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102867.8
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGCCGTGAGCGCTTGGTaGAGCTGGCGCACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLAVSAW*SWRTLA
Trigger: TGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGCAGGACGCGCAGGGTaGGCACCAGGTCGAAGACGT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLAGRAG*APGRRR
Trigger: ACGTCTTCGACCTGGTGCGCACCCTGCGCGTCCTGC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACAACCCTTCCTTCTCTaGCAGGGAGCCCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGQPFLL*QGARLH
Trigger: GTGGAGCCGGGCTCCCTGGCAGAGAAGGAAGGGTTG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGEAAAL*FRAWVH
Trigger: GTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAAGCAGAAGACAGAGGTaGGGGGTCCTCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGSRRQR*GVLPPW
Trigger: CCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAAAGGGGCCGATGGGGTaGTGGTTAACCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGKGPMG*WLTRAR
Trigger: CCTGGCCCTGGTTAACCAGCACCCCATCGGCCCCTT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATCCACCAGAACAAAGTaGTGGTTTGCACCCACGGCG +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQSTRTK*WFAPTA
Trigger: CGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGATGCCCAGTGTGGCTaGACTTTTCCTCACACGGAC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQDAQCG*TFPHTD
Trigger: GTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTTACCCCGAAGTGTCTaGCCATTCACTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACLPRSV*PFTSRI
Trigger: AATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACAGCGCCGTGAGCGCTTaGTGCAGCTGGCGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNSAVSA*CSWRTL
Trigger: CAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCT...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGGTAGGGGGTGGTGGCTaGCAGGTAGAGGCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRVGGGG*QVEALG
Trigger: GCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTAC...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACGCTGCCTGTAGGGGGTaGTGGCTGGCAGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNAACRG*WLAGRG
Trigger: GCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGC...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGCTGCCTGTAGGGGGTaGTGGCTGGCAGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLAACRG*WLAGRG
Trigger: GCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACAGCCCTCGTGGGCCTTaGCGCGCCGCAGGCTCACGA +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHSPRGP*RAAGSR
Trigger: TCGTGAGCCTGCGGCGCGCCAAGGCCCACGAGGGCT...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATGTGCTTCGACCCTGTaGGTCCACCCAGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQCASTL*VHPGVD
Trigger: ATCTACACCTGGGTGGACCCACAGGGTCGAAGCACA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFPLCRR*RVLLRS
Trigger: TGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTA +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELCFRA*VHTSDV
Trigger: TACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGAAGCGGTCCAGGTCTTaGGGTGAGATGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVKRSRS*GEMMLL
Trigger: GAGAAGCATCATCTCACCCCAAGACCTGGACCGCTT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAAAGCGGTCCAGGTCTTaGGGTGAGATGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREKRSRS*GEMMLL
Trigger: GAGAAGCATCATCTCACCCCAAGACCTGGACCGCTT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLVACKASGIGWECKGKLKTMPE*AAEDRG
Trigger: ACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCTTAACCAGGGCCAGGTaGGTGTCCAGCGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFLTRAR*VSSGFL
Trigger: CAGAAAGCCGCTGGACACCCACCTGGCCCTGGTTAA...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAACCAGAACAAAGTGCTaGTTTGCACCCACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRETRTKC*FAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTGGCGATGCCCAGTGTaGCTGCACTTTTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGWRCPV*LHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATGGCGATGCCCAGTGTaGCTGCACTTTTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQWRCPV*LHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGATCCTGGGCAGAGGCTaGCGTGTGTTGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLILGRG*RVLAPP
Trigger: GGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGAT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTAGAGATTTATCGTTaGCGCGCAGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELEIYR*RAESGP
Trigger: GGGACCAGATTCTGCGCGTCAACGATAAATCTCTAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCATCATGCAGGATGTTaGGAAAGCTCCGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKHHAGC*ESSAHS
Trigger: TGAATGGGCGGAGCTTTCTCAACATCCTGCATGATG...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGGTCTTGGGGTGAGATaGTGCTTCTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGGLGVR*CFSPQT
Trigger: TGTCTGAGGTGAGAAGCATCATCTCACCCCAAGACC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGGTCTTGGGGTGAGATaGTGCTTCTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQGLGVR*CFSPQT
Trigger: TGTCTGAGGTGAGAAGCATCATCTCACCCCAAGACC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCTTACGTGGCCCACCTTaGGCTGTCCACAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFLRGPP*AVHSYG
Trigger: CCCATAACTGTGGACAGCTCAAGGTGGGCCACGTAA...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AGAGCTGGGCAACTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTGGAGGGAGGGGATGTaGTTCGACCCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RAGQLKSKTPVGSVRVRPWREGM*FDPVGP
Trigger: TGGACCCACAGGGTCGAAGCACATCCCCTCCCTCCA...AGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAGTTGCCCAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR GCA 90 bp TGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCCACGCTGTCTCAGGGTaGTGCCATGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: WESEDNLHLVLSFHHMGSHAVSG*CHGAGA
Trigger: TGCCCCAGCCCCATGGCAGCACCCTGAGACAGCGTG...GGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp GACAGTAGTTGCATCAAAACATTAGCTGCCTATAAATCCTTGGGGAGGGCTGGGCACGCTGTCTCAGGGTaGTGCCATGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: DSSCIKTLAAYKSLGRAGHAVSG*CHGAGA
Trigger: TGCCCCAGCCCCATGGCAGCACCCTGAGACAGCGTG...CCCAGCCCTCCCCAAGGATTTATAGGCAGCTAATGTTTTGATGCAACTACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR GCA 90 bp CTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGGGTCGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAG +
Preference number: 4 (lower is better)
Translates to: LKSKTPVGSVRVRPSCWVAKAVL*STSDRE
Trigger: CTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGC...GACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR GCA 90 bp CCCAGCTGTGTGTGTTTCCCTCCTTCTGAGTCCACAGTATCAACAATGGAGGACGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAG +
Preference number: 4 (lower is better)
Translates to: PSCVCFPPSESTVSTMEDAKAVL*STSDRE
Trigger: CTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGC...GTCCTCCATTGTTGATACTGTGGACTCAGAAGGAGGGAAACACACACAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
CDS-3UTR GCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGEAAAL*FRAWVH
Trigger: GTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCAGTCCACGGTGGTACGTaGGTGGGGCAGCCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPVHGGT*VGQPSD
Trigger: GTCGGAAGGCTGCCCCACGCACGTACCACCGTGGAC...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCATGGTGGCGCGCTCCTaGTCTGTCAGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGMVARS*SVSRCL
Trigger: CAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCAT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACCTCCACAGAGATGGTaGCACCACGGTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGPPQRW*HHGTGP
Trigger: TGGCCCAGTACCGTGGTGGCACCATCTCTGTGGAGG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGAGAGTGTGGAGGCTGTaGGAGTCTGGGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLRVWRL*ESGAEP
Trigger: GGGCTCTGCCCCAGACTCGCACAGCCTCCACACTCT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCCGGATGCTGTCTGTCTaGCTCGGCCTGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGRMLSV*LGLRCW
Trigger: CCAGCACCTCAGGCCGAGGCAGACAGACAGCATCCG...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLRAASL*SLPRSV
Trigger: GACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCCGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGRAASL*SLPRSV
Trigger: GACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCG...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGAGCGCTTGGTGCAGCTaGCGCACGTTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLSAWCS*RTLADS
Trigger: GCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACTGGTCGAAGAGCAGCTaGTCGGAGCGCGGGATGACC +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNWSKSS*SERGMT
Trigger: GGTCATCCCGCGCTCCGACCAGCTGCTCTTCGACCA...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCAGCCTGTAGGGGGTGGTaGCTGGCAGGTAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPACRGW*LAGRGP
Trigger: AGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGC...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAAGCCCAAGCCCTCGTaGGCCTTGGCGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCKPKPS*ALARRR
Trigger: CCTGCGGCGCGCCAAGGCCCACGAGGGCTTGGGCTT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGLTRRI*SPTRNP
Trigger: AGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAA...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGCGATCCACTTGGTCTaGTCCACGGTGGTACGTGCG +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGAIHLV*STVVRA
Trigger: CGCACGTACCACCGTGGACCAGACCAAGTGGATCGC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGPRSGN*RSTWSG
Trigger: ACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGTCCCTTCTTCTGTGTaGTCCCCTGGAAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFVPSSV*SPGNPA
Trigger: AGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGAC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAAGCGGTCCAGGTCTTaGGGTGAGATGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQKRSRS*GEMMLL
Trigger: GAGAAGCATCATCTCACCCCAAGACCTGGACCGCTT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREKTMPE*AAEDRG
Trigger: ACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKKTMPE*AAEDRG
Trigger: ACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAGATGGAGGCATAAATaGGGGAGGAGGGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQRWRHK*GRRESP
Trigger: AGGACTCTCCCTCCTCCCCCATTTATGCCTCCATCT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTTCTGGAACTGGGGTTaGCATGGGAGATGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGFWNWG*HGRWRH
Trigger: ATGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAACCAGAACAAAGTGCTaGTTTGCACCCACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQTRTKC*FAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKTSRIT*PTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TGTTCATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCGCTCAGCAGCGCCGTaGGCGCTTGGTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CSCIRVGIRGQLALSSLFRSAAP*ALGAAG
Trigger: GCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCG...AAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGTACGCGTTGAGGCAGTaGGTGAACTGCTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLYALRQ*VNCSRS
Trigger: CGAGCGGGAGCAGTTCACTCACTGCCTCAACGCGTA...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCAGCCCCCGCGGATGCTaGAGCCCAAGCCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGSPRGC*SPSPRG
Trigger: CCCACGAGGGCTTGGGCTTCAGCATCCGCGGGGGCT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCTAGAGATTTATCGTTaGCGCGCAGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLEIYR*RAESGP
Trigger: GGGACCAGATTCTGCGCGTCAACGATAAATCTCTAG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCATCATGCAGGATGTTaGGAAAGCTCCGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGHHAGC*ESSAHS
Trigger: TGAATGGGCGGAGCTTTCTCAACATCCTGCATGATG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCAGCAGTGCACGAGTCTaGTTCCCCAGGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGSSARV*FPRLLR
Trigger: CCTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGGTCTTGGGGTGAGATaGTGCTTCTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFGLGVR*CFSPQT
Trigger: TGTCTGAGGTGAGAAGCATCATCTCACCCCAAGACC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACTTCTGAGGGGGATTTaGCATCATCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELLRGI*HHPQTH
Trigger: ATGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGGLPTV*ELRECG
Trigger: TCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACGCCGTGAGCGCTTGGTaGAGCTGGCGCACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHAVSAW*SWRTLA
Trigger: TGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGC...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACGCAGGACGCGCAGGGTaGGCACCAGGTCGAAGACGT +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHAGRAG*APGRRR
Trigger: ACGTCTTCGACCTGGTGCGCACCCTGCGCGTCCTGC...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCACAACCCTTCCTTCTCTaGCAGGGAGCCCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPQPFLL*QGARLH
Trigger: GTGGAGCCGGGCTCCCTGGCAGAGAAGGAAGGGTTG...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAG +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGAKAVL*STSDRE
Trigger: CTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GACAGTAGTTGCATCAAAACATTAGCTGCCTATAAATCCTTGGGGAGGGCTGGGGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DSSCIKTLAAYKSLGRAGEAAAL*FRAWVH
Trigger: GTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTC...CCCAGCCCTCCCCAAGGATTTATAGGCAGCTAATGTTTTGATGCAACTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR GCA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTTTCACTGCCTCATCATaGAGGATGTTGAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCFTASS*RMLRKL
Trigger: GAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAA...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCTCTGTCAGCAGGTaGCTGGCTTGGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGCSVSR*LAWSSS
Trigger: GCTGGACGACCAAGCCAGGCACCTGCTGACAGAGCA...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACTGCTCTGTCAGCAGGTaGCTGGCTTGGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNCSVSR*LAWSSS
Trigger: GCTGGACGACCAAGCCAGGCACCTGCTGACAGAGCA...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGTGCTCTGTCAGCAGGTaGCTGGCTTGGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLCSVSR*LAWSSS
Trigger: GCTGGACGACCAAGCCAGGCACCTGCTGACAGAGCA...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTATGGTGGCGCGCTCCTaGTCTGTCAGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EDISFLDAHCPHVQHTLGMVARS*SVSRCL
Trigger: CAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCAT...ACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGTGCTGAGAAGACAATaGCTGAGTGGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFVLRRQ*LSGQQK
Trigger: CTTCTGCTGCCCACTCAGGCATTGTCTTCTCAGCAC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGAGCGCTTGGTGCAGCTaGCGCACGTTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRSAWCS*RTLADS
Trigger: GCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCT...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGTAGGGGGTGGTGGCTaGCAGGTAGAGGCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCVGGGG*QVEALG
Trigger: GCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTAC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CAACTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGGTTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: QLKSKTPVGSVRVRPSCWLTRRI*SPTRNP
Trigger: AGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAA...CCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGTTGACAGCCTCCGCGTaGGTCACCCGGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLLTASA*VTRARD
Trigger: ATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAA...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCTGTCAGCAGGTGCCTaGCTTGGTCGTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLLSAGA*LGRPAV
Trigger: CACTGCTGGACGACCAAGCCAGGCACCTGCTGACAG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACTGGCCTCCACAGAGATaGTGCCACCACGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNWPPQR*CHHGTG
Trigger: CCCAGTACCGTGGTGGCACCATCTCTGTGGAGGCCA...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCAAGCGGTCCAGGTCTTaGGGTGAGATGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFKRSRS*GEMMLL
Trigger: GAGAAGCATCATCTCACCCCAAGACCTGGACCGCTT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACAGGATAGGGCAGGGGTaGCTCACCCTGGCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHRIGQG*LTLAEL
Trigger: CAGCTCGGCCAGGGTGAGCCACCCCTGCCCTATCCT...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCGVLPP*LPWLAK
Trigger: CTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQKTMPE*AAEDRG
Trigger: ACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGKTMPE*AAEDRG
Trigger: ACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTT...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGCTCTTCAGGTGAGGTaGGGACTGGACTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGALQVR*GLDSRE
Trigger: TTCCCTCGAGTCCAGTCCCCACCTCACCTGAAGAGC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGCAGGCCCCAGCTCCTaGGGTCTCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCAGPSS*GLCRRA
Trigger: AGCCCTCCTGCAGAGACCCCAGGAGCTGGGGCCTGC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTCTCGGCCTGAGGTGCTaGCCTCCGTCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCLGLRC*PPSPRH
Trigger: ATGCCGGGGAGACGGAGGCCAGCACCTCAGGCCGAG...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGTCCCTTCTTCTGTGTaGTCCCCTGGAAACCTGAGA +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFVPSSV*SPGNLR
Trigger: TCTCAGGTTTCCAGGGGACCACACAGAAGAAGGGAC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
3UTR CAA 72 bp CTGGGGGTCTCCATAGGTCAGCAACTTGGGGCAGGTTaGGTGCCAGCATTTCCATTCACAGATGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGVSIGQQLGAG*VPAFPFTDGKA
Trigger: TGCCTTTCCATCTGTGAATGGAAATGCTGGCACCAAACCTGCCCCAAGTTGCTGACCTATGGAGACCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145630.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGCAGCAGACGCCGCTTaGCCGGGCTGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGAADAA*PGCPAG
Trigger: TCCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp TTAGACAGTAGTTGCATCAAAACATTAGCTGCCTATAAATCCTTGGGGAGGGCTCTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGT +
Preference number: 4 (lower is better)
Translates to: LDSSCIKTLAAYKSLGRALHLGS*GPRTGR
Trigger: ACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAG...AGCCCTCCCCAAGGATTTATAGGCAGCTAATGTTTTGATGCAACTACTGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR TCA 90 bp CTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGGGTCCTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LKSKTPVGSVRVRPSCWVLGPHQ*CKCQGR
Trigger: ACGGCCTTGGCATTTACATCACTGGTGTGGACCCAG...GACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR TCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTCTGGTCTCCAACCTTaGGGCCGCTGCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGSGLQP*GRCSLL
Trigger: AAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGA...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCAGCAGTGCACGAGTCTaGTTCCCCAGGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VGIRGQLALSSLFPPHGFSSARV*FPRLLR
Trigger: CCTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCT...GAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTCCAGGTCTTGGGGTaGGATGATGCTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGVQVLG*DDASHL
Trigger: GAGGTGAGAAGCATCATCTCACCCCAAGACCTGGAC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCTTCTGAGGGGGATTTaGCATCATCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLLRGI*HHPQTH
Trigger: ATGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACTTCTGAGGGGGATTTaGCATCATCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQLLRGI*HHPQTH
Trigger: ATGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCCACTGTCTGAGAGCTaGGAGAGTGTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLPLSES*ESVEAV
Trigger: CACAGCCTCCACACTCTCTCAGCTCTCAGACAGTGG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLGLPTV*ELRECG
Trigger: TCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLSASA*GAGLRL
Trigger: GAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATCCAGGTCGAAGACGTTaGGGCGCGCGTGGTACGCGT +
Preference number: 4 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHPGRRR*GARGTR
Trigger: ACGCGTACCACGCGCGCCGCAACGTCTTCGACCTGG...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGCAGGACGCGCAGGGTaGGCACCAGGTCGAAGACGT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCAGRAG*APGRRR
Trigger: ACGTCTTCGACCTGGTGCGCACCCTGCGCGTCCTGC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTTATTGCTGACAGTTCTAGAGCTGGGCAACTCAAAAGCAAAACACCAGTGGGTCAACCCTTCCTTCTCTaGCAGGGAGCCCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VIADSSRAGQLKSKTPVGQPFLL*QGARLH
Trigger: GTGGAGCCGGGCTCCCTGGCAGAGAAGGAAGGGTTG...ACCCACTGGTGTTTTGCTTTTGAGTTGCCCAGCTCTAGAACTGTCAGCAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR GCA 90 bp TGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAG +
Preference number: 4 (lower is better)
Translates to: WESEDNLHLVLSFHHMGSAKAVL*STSDRE
Trigger: CTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGC...GGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHEAAAL*FRAWVH
Trigger: GTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTC...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCCTTGAGCAGCTTCACTaGCTCATCATGCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLEQLH*LIMQDV
Trigger: AACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAG...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGCCTCCACAGAGATGGTaGCACCACGGTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRPPQRW*HHGTGP
Trigger: TGGCCCAGTACCGTGGTGGCACCATCTCTGTGGAGG...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCTCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGSLAAG*GSVVLR
Trigger: TCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGA...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTTACCCCGAAGTGTCTaGCCATTCACTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: TLLVACKASGIGWECKGKLPRSV*PFTSRI
Trigger: AATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAA...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATTACCCCGAAGTGTCTaGCCATTCACTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRELPRSV*PFTSRI
Trigger: AATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGTAGGGGGTGGTGGCTaGCAGGTAGAGGCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGVGGGG*QVEALG
Trigger: GCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTAC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGCTGCCTGTAGGGGGTaGTGGCTGGCAGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCAACRG*WLAGRG
Trigger: GCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCTTGACAGCCTCCGCGTaGGTCACCCGGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: WESEDNLHLVLSFHHMGSLTASA*VTRARD
Trigger: ATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAA...GGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp CTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGGGTCTGTGCTTCGACCCTGTaGGTCCACCCAGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LKSKTPVGSVRVRPSCWVCASTL*VHPGVD
Trigger: ATCTACACCTGGGTGGACCCACAGGGTCGAAGCACA...GACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR CCA 90 bp GCAACTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGCCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: ATQKQNTSGFCACETFLLPLCRR*RVLLRS
Trigger: TGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGG...CAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR CCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCAGCGATCCACTTGGTCTaGTCCACGGTGGTACGTGCG +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPAIHLV*STVVRA
Trigger: CGCACGTACCACCGTGGACCAGACCAAGTGGATCGC...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp GAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTCCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: EDISFLDAHCPHVQHTLGPRSGN*RSTWSG
Trigger: ACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGG...ACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCACACCTGGGAGCCGGCTaGGCCCTTGTAAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPHLGAG*ALVKSW
Trigger: CCAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTG...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGCTGTCAGCAGGTGCCTaGCTTGGTCGTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRLSAGA*LGRPAV
Trigger: CACTGCTGGACGACCAAGCCAGGCACCTGCTGACAG...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTGCCGTGGCTGCCTGTaGATGAGCCTGTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRCRGCL*MSLCRC
Trigger: ACAGCGACACAGGCTCATCCACAGGCAGCCACGGCA...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGTGGGGGAGGAGGTaGCTTGATACCAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGWWGRR*LDTRQI
Trigger: GATCTGCCTGGTATCAAGCCACCTCCTCCCCCACCA...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLAAFWN*GWHGRW
Trigger: CCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTTAACCAGGGCCAGGTaGGTGTCCAGCGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGLTRAR*VSSGFL
Trigger: CAGAAAGCCGCTGGACACCCACCTGGCCCTGGTTAA...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGGGCCGATGGGGTGCTaGTTAACCAGGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCGPMGC*LTRARW
Trigger: CCACCTGGCCCTGGTTAACCAGCACCCCATCGGCCC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFTSRIT*PTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATACGCCCAGCTaGGTATACAGACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGWDTPS*VYRQHQ
Trigger: CTGGTGCTGTCTGTATACTCAGCTGGGCGTATCCCA...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACTGGGATACGCCCAGCTaGGTATACAGACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNWDTPS*VYRQHQ
Trigger: CTGGTGCTGTCTGTATACTCAGCTGGGCGTATCCCA...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp GCAACTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGTGGGATACGCCCAGCTaGGTATACAGACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: ATQKQNTSGFCACETFLLWDTPS*VYRQHQ
Trigger: CTGGTGCTGTCTGTATACTCAGCTGGGCGTATCCCA...CAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR TCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLLGPHQ*CKCQGR
Trigger: ACGGCCTTGGCATTTACATCACTGGTGTGGACCCAG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTTCTGGTCTCCAACCTTaGGGCCGCTGCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: EDISFLDAHCPHVQHTLGSGLQP*GRCSLL
Trigger: AAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGA...ACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAACTCAAACAGTGCCATaGCCATGGCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGTQTVP*PWPPQR
Trigger: TCTCTGTGGAGGCCATGGTCATGGCACTGTTTGAGT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGTCCAGGTCTTGGGGTaGGATGATGCTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLVQVLG*DDASHL
Trigger: GAGGTGAGAAGCATCATCTCACCCCAAGACCTGGAC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCTTCTGAGGGGGATTTaGCATCATCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFLLRGI*HHPQTH
Trigger: ATGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGCCGTGAGCGCTTGGTaGAGCTGGCGCACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGAVSAW*SWRTLA
Trigger: TGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCACTAGAGACACGTAGATaGCCACGCCGTGTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPLETRR*PRRVPS
Trigger: GCTCGGAACACGGCGTGGGCATCTACGTGTCTCTAG...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACTGGAGGGAGGGGATGTaGTTCGACCCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHWREGM*FDPVGP
Trigger: TGGACCCACAGGGTCGAAGCACATCCCCTCCCTCCA...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTTCACTGCCTCATCATaGAGGATGTTGAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGFTASS*RMLRKL
Trigger: GAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCCTTGAGCAGCTTCACTaGCTCATCATGCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFLEQLH*LIMQDV
Trigger: AACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAG...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCACCGTCAGGATGAGGTaGCGGGATGACTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VGIRGQLALSSLFPPHGFTVRMR*RDDLSS
Trigger: GCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGT...GAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCCGGGAGAGCGTTGGTaGTGCCCTGGGTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGPGERW*CPGWSH
Trigger: GTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCTGAGAAGACAATaGCTGAGTGGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGVLRRQ*LSGQQK
Trigger: CTTCTGCTGCCCACTCAGGCATTGTCTTCTCAGCAC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAAGGGGCCGATGGGGTaGTGGTTAACCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCKGPMG*WLTRAR
Trigger: CCTGGCCCTGGTTAACCAGCACCCCATCGGCCCCTT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLSLSGR*TSTRTK
Trigger: CTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGA...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGATGCCCAGTGTGGCTaGACTTTTCCTCACACGGAC +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGDAQCG*TFPHTD
Trigger: GTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGATGCCCAGTGTGGCTaGACTTTTCCTCACACGGAC +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLDAQCG*TFPHTD
Trigger: GTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTTACCCCGAAGTGTCTaGCCATTCACTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGLPRSV*PFTSRI
Trigger: AATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCAGCCCAGCGAGCCGGTaGAGGACGAGCTCACCGACA +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGSPASR*RTSSPT
Trigger: TGTCGGTGAGCTCGTCCTCCACCGGCTCGCTGGGCT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGTTCATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTAGCCCAGCGAGCCGGTaGAGGACGAGCTCACCGACA +
Preference number: 4 (lower is better)
Translates to: CSCIRVGIRGQLALSSLFSPASR*RTSSPT
Trigger: TGTCGGTGAGCTCGTCCTCCACCGGCTCGCTGGGCT...AAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAGCGCTTGGTGCAGCTaGCGCACGTTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCSAWCS*RTLADS
Trigger: GCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATCCCTCGGCCGTGTACTaGTCGAAGAGCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHPSAVY*SKSSWS
Trigger: CGACCAGCTGCTCTTCGACCAGTACACGGCCGAGGG...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGCCTGTAGGGGGTGGTaGCTGGCAGGTAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGACRGW*LAGRGP
Trigger: AGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTTATTGCTGACAGTTCTAGAGCTGGGCAACTCAAAAGCAAAACACCAGTGGGTTTGACAGCCTCCGCGTaGGTCACCCGGGCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: VIADSSRAGQLKSKTPVGLTASA*VTRARD
Trigger: ATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAA...ACCCACTGGTGTTTTGCTTTTGAGTTGCCCAGCTCTAGAACTGTCAGCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR CCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGCCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRPLCRR*RVLLRS
Trigger: TGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGG...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGLCFRA*VHTSDV
Trigger: TACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGGGTCACCTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTA +
Preference number: 4 (lower is better)
Translates to: QKQNTSGFCACETFLLGHLCFRA*VHTSDV
Trigger: TACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAG...GTGACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR CCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAAGATGGAGGCATAAATaGGGGAGGAGGGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGRWRHK*GRRESP
Trigger: AGGACTCTCCCTCCTCCCCCATTTATGCCTCCATCT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAACCAGAACAAAGTGCTaGTTTGCACCCACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGTRTKC*FAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTGGCACCGCCCTCAATaGCGATGCCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCWHRPQ*RCPVWL
Trigger: CAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGTGGAGGTGCGAGTCTaGGGCAGAGCCCGCACTTCA +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCVEVRV*GRARTS
Trigger: TGAAGTGCGGGCTCTGCCCCAGACTCGCACCTCCAC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102867.8
CDS-3UTR TCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAGCAGTGCACGAGTCTaGTTCCCCAGGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCSSARV*FPRLLR
Trigger: CCTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACACTCAAACAGTGCCATaGCCATGGCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNTQTVP*PWPPQR
Trigger: TCTCTGTGGAGGCCATGGTCATGGCACTGTTTGAGT...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCACTCAAACAGTGCCATaGCCATGGCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGTQTVP*PWPPQR
Trigger: TCTCTGTGGAGGCCATGGTCATGGCACTGTTTGAGT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGGTCCAGGTCTTGGGGTaGGATGATGCTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRVQVLG*DDASHL
Trigger: GAGGTGAGAAGCATCATCTCACCCCAAGACCTGGAC...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCATGGTGGCGCGCTCCTaGTCTGTCAGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGMVARS*SVSRCL
Trigger: CAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCAT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTCCTCCACAGAGATGGTaGCACCACGGTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCPPQRW*HHGTGP
Trigger: TGGCCCAGTACCGTGGTGGCACCATCTCTGTGGAGG...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCAAGGGGCCGATGGGGTaGTGGTTAACCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGKGPMG*WLTRAR
Trigger: CCTGGCCCTGGTTAACCAGCACCCCATCGGCCCCTT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAGCTCCTGGGGTCTCTaGAGGAGGGCTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCSSWGL*RRALQV
Trigger: CACCTGAAGAGCCCTCCTGCAGAGACCCCAGGAGCT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGAGAGAGTGTGGAGGTaGGAGTCTGGGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGERVWR*ESGAEP
Trigger: GGGCTCTGCCCCAGACTCGCACCTCCACACTCTCTC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102867.8
CDS-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCCCTCGGCCGTGTACTaGTCGAAGAGCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGPSAVY*SKSSWS
Trigger: CGACCAGCTGCTCTTCGACCAGTACACGGCCGAGGG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATTTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHLTRRI*SPTRNP
Trigger: AGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAA...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp GTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCTGTGCTTCGACCCTGTaGGTCCACCCAGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: VGIRGQLALSSLFPPHGFCASTL*VHPGVD
Trigger: ATCTACACCTGGGTGGACCCACAGGGTCGAAGCACA...GAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTGGCCTCCACAGAGATaGTGCCACCACGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCWPPQR*CHHGTG
Trigger: CCCAGTACCGTGGTGGCACCATCTCTGTGGAGGCCA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTGCCGTGGCTGCCTGTaGATGAGCCTGTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCCRGCL*MSLCRC
Trigger: ACAGCGACACAGGCTCATCCACAGGCAGCCACGGCA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGTTCTGGAACTGGGGTTaGCATGGGAGATGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLFWNWG*HGRWRH
Trigger: ATGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAA...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCACCAGAACAAAGTGCTaGTTTGCACCCACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGTRTKC*FAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGACCAGAACAAAGTGCTaGTTTGCACCCACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLTRTKC*FAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGTCGGAGCGCGGGATaGCCAGACGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQGRSAG*PDAAWA
Trigger: TGCCCATGCTGCGTCTGGTCATCCCGCGCTCCGACC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACCTAGAGATTTATCGTTaGCGCGCAGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNLEIYR*RAESGP
Trigger: GGGACCAGATTCTGCGCGTCAACGATAAATCTCTAG...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGT +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQLHLGS*GPRTGR
Trigger: ACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTCTGGTCTCCAACCTTaGGGCCGCTGCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCSGLQP*GRCSLL
Trigger: AAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCAGCAGTGCACGAGTCTaGTTCCCCAGGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGSSARV*FPRLLR
Trigger: CCTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACTTCTGAGGGGGATTTaGCATCATCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGLLRGI*HHPQTH
Trigger: ATGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCGLPTV*ELRECG
Trigger: TCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQLSASA*GAGLRL
Trigger: GAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTACCGTCAGGATGAGGTaGCGGGATGACTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCTVRMR*RDDLSS
Trigger: GCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCTGCTCTGTCAGCAGGTaGCTGGCTTGGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGCSVSR*LAWSSS
Trigger: GCTGGACGACCAAGCCAGGCACCTGCTGACAGAGCA...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCAGCTCCTGGGGTCTCTaGAGGAGGGCTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGSSWGL*RRALQV
Trigger: CACCTGAAGAGCCCTCCTGCAGAGACCCCAGGAGCT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTCCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCPLCRR*RVLLRS
Trigger: TGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGG...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp GTGTGTGTTTCCCTCCTTCTGAGTCCACAGTATCAACAATGGAGGACAGACTCTCTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTA +
Preference number: 4 (lower is better)
Translates to: VCVSLLLSPQYQQWRTDSLCFRA*VHTSDV
Trigger: TACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAG...AGAGTCTGTCCTCCATTGTTGATACTGTGGACTCAGAAGGAGGGAAACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144965.8
CDS-3UTR CCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACAACTGGCGATCCACTTaGTCTGGTCCACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHNWRST*SGPRWY
Trigger: GTACCACCGTGGACCAGACCAAGTGGATCGCCAGTT...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp GTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCAAGCGGTCCAGGTCTTaGGGTGAGATGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VGIRGQLALSSLFPPHGFKRSRS*GEMMLL
Trigger: GAGAAGCATCATCTCACCCCAAGACCTGGACCGCTT...GAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCAAFWN*GWHGRW
Trigger: CCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTTAACCAGGGCCAGGTaGGTGTCCAGCGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCLTRAR*VSSGFL
Trigger: CAGAAAGCCGCTGGACACCCACCTGGCCCTGGTTAA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGCAGGCCCCAGCTCCTaGGGTCTCTGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQAGPSS*GLCRRA
Trigger: AGCCCTCCTGCAGAGACCCCAGGAGCTGGGGCCTGC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLTSRIT*PTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGTSRIT*PTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATCTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHLGPHQ*CKCQGR
Trigger: ACGGCCTTGGCATTTACATCACTGGTGTGGACCCAG...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTCTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCLGPHQ*CKCQGR
Trigger: ACGGCCTTGGCATTTACATCACTGGTGTGGACCCAG...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTACTCCACATCATGCAGGATGTTaGGAAAGCTCCGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: ISFLDAHCPHVQHTLGTPHHAGC*ESSAHS
Trigger: TGAATGGGCGGAGCTTTCTCAACATCCTGCATGATG...TGGAGTACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCCTTCTGAGGGGGATTTaGCATCATCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: LYINTLTLLVACKASGIGLLRGI*HHPQTH
Trigger: ATGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAG...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCCACTGTCTGAGAGCTaGGAGAGTGTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGPLSES*ESVEAV
Trigger: CACAGCCTCCACACTCTCTCAGCTCTCAGACAGTGG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGGLPTV*ELRECG
Trigger: TCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLLAEL*RSWAEA
Trigger: AGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTAGAGACACGTAGATaGCCACGCCGTGTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLETRR*PRRVPS
Trigger: GCTCGGAACACGGCGTGGGCATCTACGTGTCTCTAG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATTCACTGCCTCATCATaGAGGATGTTGAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGFTASS*RMLRKL
Trigger: GAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAA...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp GGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCAGGGACTGAACCTTGAGCAGCTTCACTaGCTCATCATGCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: GQLALSSLFPPHGFQGLNLEQLH*LIMQDV
Trigger: AACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAG...GTTCAGTCCCTGGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCTTGAGCAGCTTCACTaGCTCATCATGCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLLEQLH*LIMQDV
Trigger: AACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACCGGGAGAGCGTTGGTaGTGCCCTGGGTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQPGERW*CPGWSH
Trigger: GTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCSLSGR*TSTRTK
Trigger: CTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGCCTGTAGGGGGTGGTaGCTGGCAGGTAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQACRGW*LAGRGP
Trigger: AGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTGTGCTTCGACCCTGTaGGTCCACCCAGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCCASTL*VHPGVD
Trigger: ATCTACACCTGGGTGGACCCACAGGGTCGAAGCACA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp CATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTA +
Preference number: 4 (lower is better)
Translates to: HAFVWESEDNLHLVLSFHLCFRA*VHTSDV
Trigger: TACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAG...GTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGTCCCTTCTTCTGTGTaGTCCCCTGGAAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHVPSSV*SPGNPA
Trigger: AGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGAC...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGTCCCTTCTTCTGTGTaGTCCCCTGGAAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCVPSSV*SPGNPA
Trigger: AGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGAC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCTTAACCAGGGCCAGGTaGGTGTCCAGCGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLTRAR*VSSGFL
Trigger: CAGAAAGCCGCTGGACACCCACCTGGCCCTGGTTAA...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGCTCTTCAGGTGAGGTaGGGACTGGACTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGALQVR*GLDSRE
Trigger: TTCCCTCGAGTCCAGTCCCCACCTCACCTGAAGAGC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTGGCGATGCCCAGTGTaGCTGCACTTTTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCWRCPV*LHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp GTTATTGCTGACAGTTCTAGAGCTGGGCAACTCAAAAGCAAAACACCAGTGGGTCTAGAGATTTATCGTTaGCGCGCAGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VIADSSRAGQLKSKTPVGLEIYR*RAESGP
Trigger: GGGACCAGATTCTGCGCGTCAACGATAAATCTCTAG...ACCCACTGGTGTTTTGCTTTTGAGTTGCCCAGCTCTAGAACTGTCAGCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR TCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGTCTTGGGGTGAGATaGTGCTTCTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHGLGVR*CFSPQT
Trigger: TGTCTGAGGTGAGAAGCATCATCTCACCCCAAGACC...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCTTACGTGGCCCACCTTaGGCTGTCCACAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLRGPP*AVHSYG
Trigger: CCCATAACTGTGGACAGCTCAAGGTGGGCCACGTAA...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp CTTATGTACAGGTTATTGCTGACAGTTCTAGAGCTGGGCAACTCAAAAGCAAAACTAGAGACACGTAGATaGCCACGCCGTGTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LMYRLLLTVLELGNSKAKLETRR*PRRVPS
Trigger: GCTCGGAACACGGCGTGGGCATCTACGTGTCTCTAG...TTTTGCTTTTGAGTTGCCCAGCTCTAGAACTGTCAGCAATAACCTGTACATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACAACCCTTCCTTCTCTaGCAGGGAGCCCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQQPFLL*QGARLH
Trigger: GTGGAGCCGGGCTCCCTGGCAGAGAAGGAAGGGTTG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGTGCTGAGAAGACAATaGCTGAGTGGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCVLRRQ*LSGQQK
Trigger: CTTCTGCTGCCCACTCAGGCATTGTCTTCTCAGCAC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGSLSGR*TSTRTK
Trigger: CTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGA...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAAGAGTGTGGAGGCTGTaGGAGTCTGGGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQRVWRL*ESGAEP
Trigger: GGGCTCTGCCCCAGACTCGCACAGCCTCCACACTCT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQRAASL*SLPRSV
Trigger: GACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAAGCGCTTGGTGCAGCTaGCGCACGTTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQSAWCS*RTLADS
Trigger: GCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAATGGTCGAAGAGCAGCTaGTCGGAGCGCGGGATGACC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQWSKSS*SERGMT
Trigger: GGTCATCCCGCGCTCCGACCAGCTGCTCTTCGACCA...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAGATGGAGGCATAAATaGGGGAGGAGGGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCRWRHK*GRRESP
Trigger: AGGACTCTCCCTCCTCCCCCATTTATGCCTCCATCT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAG +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQAKAVL*STSDRE
Trigger: CTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACCTCCACAGAGATGGTaGCACCACGGTACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQPPQRW*HHGTGP
Trigger: TGGCCCAGTACCGTGGTGGCACCATCTCTGTGGAGG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAAGCTCCTGGGGTCTCTaGAGGAGGGCTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQSSWGL*RRALQV
Trigger: CACCTGAAGAGCCCTCCTGCAGAGACCCCAGGAGCT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAATTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQLTRRI*SPTRNP
Trigger: AGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAA...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTA +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLCFRA*VHTSDV
Trigger: TACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAATGGCCTCCACAGAGATaGTGCCACCACGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQWPPQR*CHHGTG
Trigger: CCCAGTACCGTGGTGGCACCATCTCTGTGGAGGCCA...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCKTMPE*AAEDRG
Trigger: ACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTAGAGATTTATCGTTaGCGCGCAGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLEIYR*RAESGP
Trigger: GGGACCAGATTCTGCGCGTCAACGATAAATCTCTAG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQGLPTV*ELRECG
Trigger: TCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQLLAEL*RSWAEA
Trigger: AGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAACCGTCAGGATGAGGTaGCGGGATGACTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQTVRMR*RDDLSS
Trigger: GCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQPLCRR*RVLLRS
Trigger: TGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGTTGTAGAGGTGCCGTaGCTGCCTGTGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQVVEVP*LPVDEP
Trigger: AGGCTCATCCACAGGCAGCCACGGCACCTCTACAAC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQAAFWN*GWHGRW
Trigger: CCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAATGTCCAGCGGCTTTCTaGAACTGGGGTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQCPAAF*NWGWHG
Trigger: CCCATGCCAACCCCAGTTCCAGAAAGCCGCTGGACA...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAATGGGATACGCCCAGCTaGGTATACAGACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQWDTPS*VYRQHQ
Trigger: CTGGTGCTGTCTGTATACTCAGCTGGGCGTATCCCA...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQLGPHQ*CKCQGR
Trigger: ACGGCCTTGGCATTTACATCACTGGTGTGGACCCAG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR TCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTTCTGAGGGGGATTTaGCATCATCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLLRGI*HHPQTH
Trigger: ATGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATTTCACTGCCTCATCATaGAGGATGTTGAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHFTASS*RMLRKL
Trigger: GAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAA...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR GCA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTTCACTGCCTCATCATaGAGGATGTTGAGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCFTASS*RMLRKL
Trigger: GAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAATCCACCAGAACAAAGTaGTGGTTTGCACCCACGGCG +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQSTRTK*WFAPTA
Trigger: CGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGA...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACTTGTTCTTAGCGGATaGTGTCTGTCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQLVLSG*CLSASA
Trigger: GGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGATGCCCAGTGTGGCTaGACTTTTCCTCACACGGAC +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQDAQCG*TFPHTD
Trigger: GTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR TCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAACTCAAACAGTGCCATaGCCATGGCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQTQTVP*PWPPQR
Trigger: TCTCTGTGGAGGCCATGGTCATGGCACTGTTTGAGT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR GCA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCTTACCCCGAAGTGTCTaGCCATTCACTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGLPRSV*PFTSRI
Trigger: AATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAA...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CCA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQTSRIT*PTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp TCCCGCTCGGGCTCGCTCAGCAGCGCCGTGAGCGCTTGGTGCAGCTaGCGCACGTTGGCAGACAGCAGCCGCAACCCCGCGCCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: SRSGSLSSAVSAWCS*RTLADSSRNPAPPP
Trigger: CGGCGGGGGCGCGGGGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCCCGAGCGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp GCCCCGCGCCGTCGGGAGCGGCCCAGGCGGGCTGCCTGTAGGGGGTaGTGGCTGGCAGGTAGAGGCCCTCGGCCGTGTACTGGTCGAAGA +
Preference number: 5 (lower is better)
Translates to: APRRRERPRRAACRG*WLAGRGPRPCTGRR
Trigger: TCTTCGACCAGTACACGGCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGCCCGCCTGGGCCGCTCCCGACGGCGCGGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp CCGCGCCGTCGGGAGCGGCCCAGGCGGGCTGCCTGTAGGGGGTGGTaGCTGGCAGGTAGAGGCCCTCGGCCGTGTACTGGTCGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: PRRRERPRRAACRGW*LAGRGPRPCTGRRA
Trigger: TGCTCTTCGACCAGTACACGGCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGCCCGCCTGGGCCGCTCCCGACGGCGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS GCA 90 bp AACTGCTCCCGCTCGGGCTCGCTCAGCAGCGCCGTGAGCGCTTGGTaGAGCTGGCGCACGTTGGCAGACAGCAGCCGCAACCCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: NCSRSGSLSSAVSAW*SWRTLADSSRNPAP
Trigger: GGGCGCGGGGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCCCGAGCGGGAGCAGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp GTGAACTGCTCCCGCTCGGGCTCGCTCAGCAGCGCCGTGAGCGCTTaGTGCAGCTGGCGCACGTTGGCAGACAGCAGCCGCAACCCCGCG +
Preference number: 5 (lower is better)
Translates to: VNCSRSGSLSSAVSA*CSWRTLADSSRNPA
Trigger: CGCGGGGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCCCGAGCGGGAGCAGTTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCGGCAGCAGACGCCGCTaGACCGGGCTGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLGSRRR*TGLSSR
Trigger: CCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGCC...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS TCA 90 bp ACCAGGTCGAAGACGTTGCGGCGCGCGTGGTACGCGTTGAGGCAGTaGGTGAACTGCTCCCGCTCGGGCTCGCTCAGCAGCGCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: TRSKTLRRAWYALRQ*VNCSRSGSLSSAVS
Trigger: GCTCACGGCGCTGCTGAGCGAGCCCGAGCGGGAGCAGTTCACTCACTGCCTCAACGCGTACCACGCGCGCCGCAACGTCTTCGACCTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGGCAGCAGACGCCGCTaGACCGGGCTGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACGSRRR*TGLSSR
Trigger: CCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGCC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp GGCAGCAGAAGACAGAGGTGCGGGGTCCTCCCTCCCTGGCTTCCGTaGCTGGCCAAGCAAGCGGTCATGACCTTGAGCCAGGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GSRRQRCGVLPPWLP*LAKQAVMTLSQGWW
Trigger: CCACCACCCCTGGCTCAAGGTCATGACCGCTTGCTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp GGCGGCGGGCTGCGGTTCCGTGGTGCTGAGAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGTGCGGGGTCCTCCCTCCCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GGGLRFRGAEKTMPE*AAEDRGAGSSLPGF
Trigger: GAAGCCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTTCTCAGCACCACGGAACCGCAGCCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTGCAGCTGGCGCACGTaGGCAGACAGCAGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLCSWRT*ADSSRN
Trigger: GTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCCAAGCGGTCATGACCTaGAGCCAGGGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLQAVMT*SQGWWG
Trigger: CCCCCACCACCCCTGGCTCAAGGTCATGACCGCTTG...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCAGAGGCTGGCGTGTGTaGGCACCGCCCTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLRGWRV*APPSMA
Trigger: CGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp CGGGAACTGGCGATCCACTTGGTCTGGTCCACGGTGGTACGTGCGTaGGGCAGCCTTCCGACGTCCTTCACCGTCAGGATGAGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RELAIHLVWSTVVRA*GSLPTSFTVRMRCR
Trigger: CCGGCACCTCATCCTGACGGTGAAGGACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp GCCCAGTGTGGCTGCACTTTTCCTCACACGGACCAGGGTGGACGTTaGCTCCAGCAGGCCGGGAGGTTTGTTGGCACCCTCCGCGGTCCT +
Preference number: 5 (lower is better)
Translates to: AQCGCTFPHTDQGGR*LQQAGRFVGTLRGP
Trigger: AGGACCGCGGAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGAGGAAAAGTGCAGCCACACTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 90 bp TCCTGGGCAGAGGCTGGCGTGTGTTGGCACCGCCCTCAATGGCGATaGCCAGTGTGGCTGCACTTTTCCTCACACGGACCAGGGTGGACG +
Preference number: 5 (lower is better)
Translates to: SWAEAGVCWHRPQWR*PVWLHFSSHGPGWT
Trigger: CGTCCACCCTGGTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCTGCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp GCGTGGGTCACCCGGGCTAGAGATTTATCGTTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCTTCCTTCTCTGCCAGGGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: AWVTRARDLSLTRRI*SPTRNPSFSAREPG
Trigger: GCCGGGCTCCCTGGCAGAGAAGGAAGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAACGATAAATCTCTAGCCCGGGTGACCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS CCA 90 bp TTGGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTTGGTCTaGTCCACGGTGGTACGTGCGTGGGGCAGCCTTCCGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: LATLSPIRELAIHLV*STVVRAWGSLPTSF
Trigger: GAAGGACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp CTGAGTTGGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTTaGTCTGGTCCACGGTGGTACGTGCGTGGGGCAGCCTTCCGACGT +
Preference number: 5 (lower is better)
Translates to: LSWRRFPRSGNWRST*SGPRWYVRGAAFRR
Trigger: ACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp TGGCGATGCCCAGTGTGGCTGCACTTTTCCTCACACGGACCAGGGTaGACGTTGGCTCCAGCAGGCCGGGAGGTTTGTTGGCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: WRCPVWLHFSSHGPG*TLAPAGREVCWHPP
Trigger: CGGAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp GACCAGACCCTGCTGAGTTGGCGACGCTTTCCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGTCCACGGTGGTACGTGCGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: DQTLLSWRRFPRSGN*RSTWSGPRWYVRGA
Trigger: TGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGACCAGGTCGAAGACGTaGCGGCGCGCGTGGTACGCG +
Preference number: 5 (lower is better)
Translates to: LLVACKASGIGWECKGKLTRSKT*RRAWYA
Trigger: CGCGTACCACGCGCGCCGCAACGTCTTCGACCTGGT...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS GCA 90 bp GATCCGGGAACTGGCGATCCACTTGGTCTGGTCCACGGTGGTACGTaGGTGGGGCAGCCTTCCGACGTCCTTCACCGTCAGGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: DPGTGDPLGLVHGGT*VGQPSDVLHRQDEV
Trigger: CACCTCATCCTGACGGTGAAGGACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS GCA 90 bp GCCTGGCTTGGTCGTCCAGCAGTGCACGAGTCTGATTCCCCAGGCTaGTCAGGGTCACCTGGGAGCCGGCTGGGCCCTTGTAAAATCCTG +
Preference number: 5 (lower is better)
Translates to: AWLGRPAVHESDSPG*SGSPGSRLGPCKIL
Trigger: CAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTGACCCTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCTGGACGACCAAGCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp TTTCCCCGATCCGGGAACTGGCGATCCACTTGGTCTGGTCCACGGTaGTACGTGCGTGGGGCAGCCTTCCGACGTCCTTCACCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: FPRSGNWRSTWSGPR*YVRGAAFRRPSPSG
Trigger: TCCTGACGGTGAAGGACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp CTGGAAACCCTGCTGAGTTGGCGACGCTTTCCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGTCCACGGTGGTACGTGCGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LETLLSWRRFPRSGN*RSTWSGPRWYVRGA
Trigger: TGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTGCAGCTGGCGCACGTaGGCAGACAGCAGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPCSWRT*ADSSRN
Trigger: GTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAACCAGGTCGAAGACGTaGCGGCGCGCGTGGTACGCG +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRETRSKT*RRAWYA
Trigger: CGCGTACCACGCGCGCCGCAACGTCTTCGACCTGGT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGACCAGGTCGAAGACGTaGCGGCGCGCGTGGTACGCG +
Preference number: 5 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVTRSKT*RRAWYA
Trigger: CGCGTACCACGCGCGCCGCAACGTCTTCGACCTGGT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTCAAGCGGTCATGACCTaGAGCCAGGGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPQAVMT*SQGWWG
Trigger: CCCCCACCACCCCTGGCTCAAGGTCATGACCGCTTG...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTAGAGGCTGGCGTGTGTaGGCACCGCCCTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCRGWRV*APPSMA
Trigger: CGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 90 bp CTTGCCATTCTTGTTCTTAGCGGATGCTGTCTGTCTGCCTCGGCCTaGGGTGCTGGCCTCCGTCTCCCCGGCATCCACGCCACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LAILVLSGCCLSASA*GAGLRLPGIHATVL
Trigger: GAGGACAGTGGCGTGGATGCCGGGGAGACGGAGGCCAGCACCTCAGGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAGAATGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 90 bp AGAGCCTGGGTCCACACCAGTGATGTAAATGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAGGCCCAAGGACCGGCCGTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: RAWVHTSDVNAKAVL*STSDREAQGPAVPQ
Trigger: TTGGGGGACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGCATTTACATCACTGGTGTGGACCCAGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
ENSMUST00000144965.8
CDS GCA 90 bp CCGGGAGGTTTGTTGGCACCCTCCGCGGTCCTCTCCGTCCGGGGCTaGTCCTTGCCATTCTTGTTCTTAGCGGATGCTGTCTGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: PGGLLAPSAVLSVRG*SLPFLFLADAVCLP
Trigger: AGGCAGACAGACAGCATCCGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGACGGAGAGGACCGCGGAGGGTGCCAACAAACCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp GGTAGTACATCATGGTGGCGCGCTCCTGCTCTGTCAGCAGGTGCCTaGCTTGGTCGTCCAGCAGTGCACGAGTCTGATTCCCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GSTSWWRAPALSAGA*LGRPAVHESDSPGC
Trigger: GCAGCCTGGGGAATCAGACTCGTGCACTGCTGGACGACCAAGCCAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCATGATGTACTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp CAGAGATGGTGCCACCACGGTACTGGGCCAGGTAGTACATCATGGTaGCGCGCTCCTGCTCTGTCAGCAGGTGCCTGGCTTGGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: QRWCHHGTGPGSTSW*RAPALSAGAWLGRP
Trigger: TGGACGACCAAGCCAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCATGATGTACTACCTGGCCCAGTACCGTGGTGGCACCATCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp CCACAGAGATGGTGCCACCACGGTACTGGGCCAGGTAGTACATCATaGTGGCGCGCTCCTGCTCTGTCAGCAGGTGCCTGGCTTGGTCGT +
Preference number: 5 (lower is better)
Translates to: PQRWCHHGTGPGSTS*WRAPALSAGAWLGR
Trigger: ACGACCAAGCCAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCATGATGTACTACCTGGCCCAGTACCGTGGTGGCACCATCTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp CATCTTATCCGTGCCCTGACCTTCTCACCAAGGATAGGGCAGGGGTaGCTCACCCTGGCCGAGCTGACGGTTGTAGAGGTGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: HLIRALTFSPRIGQG*LTLAELTVVEVPWL
Trigger: CAGCCACGGCACCTCTACAACCGTCAGCTCGGCCAGGGTGAGCCACCCCTGCCCTATCCTTGGTGAGAAGGTCAGGGCACGGATAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTGCAGCTGGCGCACGTaGGCAGACAGCAGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVCSWRT*ADSSRN
Trigger: GTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATGCAGCTGGCGCACGTaGGCAGACAGCAGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRECSWRT*ADSSRN
Trigger: GTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACAGCGCCGTGAGCGCTaGGTGCAGCTGGCGCACGTT +
Preference number: 5 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQQRRER*VQLAHV
Trigger: AACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGGCAGCAGACGCCGCTaGACCGGGCTGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFGSRRR*TGLSSR
Trigger: CCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGCC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACAGCAGGTGCCTGGCTaGGTCGTCCAGCAGTGCACG +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREQQVPG*VVQQCT
Trigger: CGTGCACTGCTGGACGACCAAGCCAGGCACCTGCTG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCAAGCGGTCATGACCTaGAGCCAGGGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TLLVACKASGIGWECKGKQAVMT*SQGWWG
Trigger: CCCCCACCACCCCTGGCTCAAGGTCATGACCGCTTG...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAACAAGCGGTCATGACCTaGAGCCAGGGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREQAVMT*SQGWWG
Trigger: CCCCCACCACCCCTGGCTCAAGGTCATGACCGCTTG...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGCAAGCGGTCATGACCTaGAGCCAGGGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVQAVMT*SQGWWG
Trigger: CCCCCACCACCCCTGGCTCAAGGTCATGACCGCTTG...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTTTCTGGAACTGGGGTaGGCATGGGAGATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLFLELG*AWEMEA
Trigger: TGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAAA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAAGAGGCTGGCGTGTGTaGGCACCGCCCTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQRERGWRV*APPSMA
Trigger: CGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 90 bp CGTGCGTGGGGCAGCCTTCCGACGTCCTTCACCGTCAGGATGAGGTaGCGGGATGACTTGAGCAGCTTCACTGCCTCATCATGCAGGATG +
Preference number: 5 (lower is better)
Translates to: RAWGSLPTSFTVRMR*RDDLSSFTASSCRM
Trigger: CATCCTGCATGATGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGTGAAGGACGTCGGAAGGCTGCCCCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCGACAGCACCAGCTTCTaGGAGCCTTTGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACDSTSF*EPLRAL
Trigger: CAAGGCTCTCAAAGGCTCCAAGAAGCTGGTGCTGTC...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAACAGCAGGTGCCTGGCTaGGTCGTCCAGCAGTGCACG +
Preference number: 5 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQQQVPG*VVQQCT
Trigger: CGTGCACTGCTGGACGACCAAGCCAGGCACCTGCTG...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTTTCTGGAACTGGGGTaGGCATGGGAGATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACFLELG*AWEMEA
Trigger: TGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAAA...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAGAGGCTGGCGTGTGTaGGCACCGCCCTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQRGWRV*APPSMA
Trigger: CGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCAGAGGCTGGCGTGTGTaGGCACCGCCCTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGRGWRV*APPSMA
Trigger: CGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCT...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCATTACGTGGCCCACCTaGAGCTGTCCACAGTTATGG +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLITWPT*SCPQLW
Trigger: CCATAACTGTGGACAGCTCAAGGTGGGCCACGTAAT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 90 bp TGGCCCACCTTGAGCTGTCCACAGTTATGGGCAGAACCTCCTCGCTaGATTGTGACGATCCTGGGCAGAGGCTGGCGTGTGTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: WPTLSCPQLWAEPPR*IVTILGRGWRVLAP
Trigger: CGGTGCCAACACACGCCAGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAGGTTCTGCCCATAACTGTGGACAGCTCAAGGTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 90 bp CCCTTCTTCTGTGTGGTCCCCTGGAAACCTGAGACCAGACCCTGCTaGGTTGGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTT +
Preference number: 5 (lower is better)
Translates to: PFFCVVPWKPETRPC*VGDAFPDPGTGDPL
Trigger: AAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTCTGGTCTCAGGTTTCCAGGGGACCACACAGAAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
CDS TCA 90 bp ATCCTGGCTTGCTTGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCTaGGACCAGACCCTGCTGAGTTGGCGACGCTTTCCCCGATCCGGG +
Preference number: 5 (lower is better)
Translates to: ILACLSLLLCGPLET*DQTLLSWRRFPRSG
Trigger: CCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTCTGGTCTCAGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCAAGCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
CDS GCA 90 bp GGCAGAGCCCGCACTTCATTCACATCAGGCTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAGTGCTGGTTTGCACCCACGGCGTCA +
Preference number: 5 (lower is better)
Translates to: GRARTSFTSGSLSGR*TSTRTKCWFAPTAS
Trigger: TGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGAGCCTGATGTGAATGAAGTGCGGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp GGCTGCCTCGCCTTCATAGACTCGATCTCGCGCCTCAGCACCAGGTaGTCAAAGCGGTCCAGGTCTTGGGGTGAGATGATGCTTCTCACC +
Preference number: 5 (lower is better)
Translates to: GCLAFIDSISRLSTR*SKRSRSWGEMMLLT
Trigger: GGTGAGAAGCATCATCTCACCCCAAGACCTGGACCGCTTTGACCACCTGGTGCTGAGGCGCGAGATCGAGTCTATGAAGGCGAGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp TGTCCTCGCTCAGGGTCTGCCCACTGTCTGAGAGCTGAGAGAGTGTaGAGGCTGTGCGAGTCTGGGGCAGAGCCCGCACTTCATTCACAT +
Preference number: 5 (lower is better)
Translates to: CPRSGSAHCLRAERV*RLCESGAEPALHSH
Trigger: ATGTGAATGAAGTGCGGGCTCTGCCCCAGACTCGCACAGCCTCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACCCTGAGCGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp TGTCCTCGCTCAGGGTCTGCCCACTGTCTGAGAGCTGAGAGAGTGTaGAGGTGCGAGTCTGGGGCAGAGCCCGCACTTCATTCACATCAG +
Preference number: 5 (lower is better)
Translates to: CPRSGSAHCLRAERV*RCESGAEPALHSHQ
Trigger: CTGATGTGAATGAAGTGCGGGCTCTGCCCCAGACTCGCACCTCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACCCTGAGCGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102867.8
CDS-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTAGGTGCCGGGATGACTaGAGCAGCTTCACTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPRCRDD*SSFTAS
Trigger: TGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCT...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTAGGTGCCGGGATGACTaGAGCAGCTTCACTGCCTCA +
Preference number: 5 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCRCRDD*SSFTAS
Trigger: TGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGAACTGGCGATCCACTaGGTCTGGTCCACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCELAIH*VWSTVV
Trigger: TACCACCGTGGACCAGACCAAGTGGATCGCCAGTTC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCAACTTGGCGTGTGTGTaGAGCAACTCAAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLNLACV*SNSNSA
Trigger: GGCACTGTTTGAGTTGCTCAACACACACGCCAAGTT...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGGGGGGAGGAGGTGGCTaGATACCAGGCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: LTLLVACKASGIGWECKGGGGGG*IPGRSS
Trigger: AGAAGATCTGCCTGGTATCAAGCCACCTCCTCCCCC...CCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTGTCCGGGGCTGCTCCTaGCCATTCTTGTTCTTAGCG +
Preference number: 5 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPVRGCS*PFLFLA
Trigger: CGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGAC...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCATTACGTGGCCCACCTaGAGCTGTCCACAGTTATGG +
Preference number: 5 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACITWPT*SCPQLW
Trigger: CCATAACTGTGGACAGCTCAAGGTGGGCCACGTAAT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREIRAAS*CSLPRS
Trigger: ACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAAT...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: TLLVACKASGIGWECKGKIRAAS*CSLPRS
Trigger: ACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAAT...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCTGGCGGCTCTCTCTCTCCTTGGTCTaGAAGGCCTCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: TEPGGRGCDWCEQACWRLSLSLV*KASAMI
Trigger: AATCATCGCTGAGGCCTTCAAGACCAAGGAGAGAGA...GAGCCGCCAGCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 90 bp TGGCTTGCTTGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTaGGTTGGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTT +
Preference number: 5 (lower is better)
Translates to: WLACPFFCVVPWKPC*VGDAFPDPGTGDPL
Trigger: AAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS GCA 90 bp TCAGGGTCACCTGGGAGCCGGCTGGGCCCTTGTAAAATCCTGGCTTaGTTGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: SGSPGSRLGPCKILA*LSLLLCGPLETLLS
Trigger: ACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCAAGCCAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTGACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS CCA 90 bp TGCTTGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTGAGTTaGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTTGGTCT +
Preference number: 5 (lower is better)
Translates to: CLSLLLCGPLETLLS*RRFPRSGNWRSTWS
Trigger: AGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS-3UTR CAA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTGACAGCACCAGCTTCTaGGAGCCTTTGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCDSTSF*EPLRAL
Trigger: CAAGGCTCTCAAAGGCTCCAAGAAGCTGGTGCTGTC...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGAGGTGCCGGGATGACTaGAGCAGCTTCACTGCCTCA +
Preference number: 5 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVRCRDD*SSFTAS
Trigger: TGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGGGGGGAGGAGGTGGCTaGATACCAGGCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVGGGGG*IPGRSS
Trigger: AGAAGATCTGCCTGGTATCAAGCCACCTCCTCCCCC...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 90 bp GCGATGATTCGGGCGGCCTCCTTGTGCTCCTTACCCCGAAGTGTCTaGCCATTCACTTCCAGAATTACGTGGCCCACCTTGAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: AMIRAASLCSLPRSV*PFTSRITWPTLSCP
Trigger: TGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAATCATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp GGGATGTGCTTCGACCCTGTGGGTCCACCCAGGTGTAGATGTGGTTaGTCACATAGCCCCCTGGGATACGCCCAGCTGAGTATACAGACA +
Preference number: 5 (lower is better)
Translates to: GMCFDPVGPPRCRCG*SHSPLGYAQLSIQT
Trigger: TGTCTGTATACTCAGCTGGGCGTATCCCAGGGGGCTATGTGACCAACCACATCTACACCTGGGTGGACCCACAGGGTCGAAGCACATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCAGCGCCGTGAGCGCTaGGTGCAGCTGGCGCACGTT +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLQRRER*VQLAHV
Trigger: AACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGGGCAGCAGACGCCGCTaGACCGGGCTGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRGSRRR*TGLSSR
Trigger: CCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGCC...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGAACTGGCGATCCACTaGGTCTGGTCCACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGELAIH*VWSTVV
Trigger: TACCACCGTGGACCAGACCAAGTGGATCGCCAGTTC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp CATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGCGTGCAAAATCCTGGCTTGCTaGTCCCTTCTTCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: HRGTEPGGRGCDWCEQACKILAC*SLLLCG
Trigger: ACCACACAGAAGAAGGGACAAGCAAGCCAGGATTTT...GCACGCTTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGACAGCAGGTGCCTGGCTaGGTCGTCCAGCAGTGCACG +
Preference number: 5 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGQQVPG*VVQQCT
Trigger: CGTGCACTGCTGGACGACCAAGCCAGGCACCTGCTG...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCGGGGGAGGAGGTGGCTaGATACCAGGCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGGGGGG*IPGRSS
Trigger: AGAAGATCTGCCTGGTATCAAGCCACCTCCTCCCCC...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGGGGGAGGAGGTGGCTaGATACCAGGCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQGGGGG*IPGRSS
Trigger: AGAAGATCTGCCTGGTATCAAGCCACCTCCTCCCCC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAATTTCTGGAACTGGGGTaGGCATGGGAGATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREFLELG*AWEMEA
Trigger: TGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAAA...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAAGAGGCTGGCGTGTGTaGGCACCGCCCTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGRGWRV*APPSMA
Trigger: CGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 90 bp GGGCAGCCTTCCGACGTCCTTCACCGTCAGGATGAGGTGCCGGGATaGCTTGAGCAGCTTCACTGCCTCATCATGCAGGATGTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: GQPSDVLHRQDEVPG*LEQLHCLIMQDVEK
Trigger: TTTCTCAACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGTGAAGGACGTCGGAAGGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 90 bp AATCTGGTCTCCAACCTTGAGGCCGCTGCTCTCTGCTTCAGAGCCTaGGTCCACACCAGTGATGTAAATGCCAAGGCCGTACTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: NLVSNLEAAALCFRA*VHTSDVNAKAVLCS
Trigger: GGAGCAGAGTACGGCCTTGGCATTTACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCACCAGGTCGAAGACGTaGCGGCGCGCGTGGTACGCG +
Preference number: 5 (lower is better)
Translates to: WESEDNLHLVLSFHHMGSTRSKT*RRAWYA
Trigger: CGCGTACCACGCGCGCCGCAACGTCTTCGACCTGGT...GGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LLVACKASGIGWECKGKLARDLS*TRRIWS
Trigger: GGACCAGATTCTGCGCGTCAACGATAAATCTCTAGC...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAGACAGCACCAGCTTCTaGGAGCCTTTGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQDSTSF*EPLRAL
Trigger: CAAGGCTCTCAAAGGCTCCAAGAAGCTGGTGCTGTC...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTCATCATGCAGGATGTaGAGAAAGCTCCGCCCATTC +
Preference number: 5 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSSCRM*RKLRPF
Trigger: GAATGGGCGGAGCTTTCTCAACATCCTGCATGATGA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTAACTTGGCGTGTGTGTaGAGCAACTCAAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCNLACV*SNSNSA
Trigger: GGCACTGTTTGAGTTGCTCAACACACACGCCAAGTT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCGGGGGAGGAGGTGGCTaGATACCAGGCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFGGGGG*IPGRSS
Trigger: AGAAGATCTGCCTGGTATCAAGCCACCTCCTCCCCC...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGCAAGCGGTCATGACCTaGAGCCAGGGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLQAVMT*SQGWWG
Trigger: CCCCCACCACCCCTGGCTCAAGGTCATGACCGCTTG...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCCAAGCGGTCATGACCTaGAGCCAGGGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LYINTLTLLVACKASGIGQAVMT*SQGWWG
Trigger: CCCCCACCACCCCTGGCTCAAGGTCATGACCGCTTG...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGATTACGTGGCCCACCTaGAGCTGTCCACAGTTATGG +
Preference number: 5 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVITWPT*SCPQLW
Trigger: CCATAACTGTGGACAGCTCAAGGTGGGCCACGTAAT...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTCTCTCTCCTTGGTCTaGAAGGCCTCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSLSLV*KASAMI
Trigger: AATCATCGCTGAGGCCTTCAAGACCAAGGAGAGAGA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 90 bp TCCTTGGTCTTGAAGGCCTCAGCGATGATTCGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTCTGCCCATTCACTTCCAGAATTACG +
Preference number: 5 (lower is better)
Translates to: SLVLKASAMIRAASL*SLPRSVCPFTSRIT
Trigger: CGTAATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAATCATCGCTGAGGCCTTCAAGACCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 90 bp CCCAACACCAGGTTCACCTTTTTCTCATCTCCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCATCTTCACGCTGTCTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PNTRFTFFSSPLCRR*RVLLRSSSRCLRVL
Trigger: CAGCACCCTGAGACAGCGTGAAGATGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGGAGATGAGAAAAAGGTGAACCTGGTGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
ENSMUST00000144965.8
CDS CCA 90 bp TGCTCCTTACCCCGAAGTGTCTGCCCATTCACTTCCAGAATTACGTaGCCCACCTTGAGCTGTCCACAGTTATGGGCAGAACCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: CSLPRSVCPFTSRIT*PTLSCPQLWAEPPR
Trigger: GCGAGGAGGTTCTGCCCATAACTGTGGACAGCTCAAGGTGGGCCACGTAATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCTGCAGCTGGCGCACGTaGGCAGACAGCAGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: VGIRGQLALSSLFPPHGFCSWRT*ADSSRN
Trigger: GTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCA...GAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp GACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: DIAGRLQGLWDRLGVQREARDLS*TRRIWS
Trigger: GGACCAGATTCTGCGCGTCAACGATAAATCTCTAGC...TTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGCTGGCGGCTCATTTGTGGCACTGAAGGTCCTCCTGGCAGGAAGCAGTCTGTGTCATCATGCAGGATGTaGAGAAAGCTCCGCCCATTC +
Preference number: 5 (lower is better)
Translates to: CWRLICGTEGPPGRKQSVSSCRM*RKLRPF
Trigger: GAATGGGCGGAGCTTTCTCAACATCCTGCATGATGA...CACAGACTGCTTCCTGCCAGGAGGACCTTCAGTGCCACAAATGAGCCGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp ACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGTCATCATGCAGGATGTaGAGAAAGCTCCGCCCATTC +
Preference number: 5 (lower is better)
Translates to: TLLVACKASGIGWECKGKSSCRM*RKLRPF
Trigger: GAATGGGCGGAGCTTTCTCAACATCCTGCATGATGA...CTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GTCTGGCCCTCTTCTTCTCCTAGTCTGGGCCAAGGGCCCAGGCAGGGTGTATGTAAAATCCTGGCTTGCTaGTCCCTTCTTCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: VWPSSSPSLGQGPRQGVCKILAC*SLLLCG
Trigger: ACCACACAGAAGAAGGGACAAGCAAGCCAGGATTTT...ACATACACCCTGCCTGGGCCCTTGGCCCAGACTAGGAGAAGAAGAGGGCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTCAGCAGGTGCCTGGCTaGGTCGTCCAGCAGTGCACG +
Preference number: 5 (lower is better)
Translates to: EDISFLDAHCPHVQHTLGQQVPG*VVQQCT
Trigger: CGTGCACTGCTGGACGACCAAGCCAGGCACCTGCTG...ACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp TTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGTGCAAAGGGAAGCTGTCTTCTGAGGGGGATTaGACATCATCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: LLVACKASGIGWECKGKLSSEGD*TSSTDT
Trigger: TGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAGA...CAGCTTCCCTTTGCACTCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCATCTGGGGTGGCAGTACCCCTTCTTCTGAGGGGGATTaGACATCATCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: LSCVLTAKGLGIWGGSTPSSEGD*TSSTDT
Trigger: TGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAGA...AGGGGTACTGCCACCCCAGATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGIRAAS*CSLPRS
Trigger: ACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAAT...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTCAGCGCCGTGAGCGCTaGGTGCAGCTGGCGCACGTT +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCQRRER*VQLAHV
Trigger: AACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTG...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGGCAGCAGACGCCGCTaGACCGGGCTGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGGSRRR*TGLSSR
Trigger: CCTGCTGGACAGCCCGGTCAAGCGGCGTCTGCTGCC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTCATCATGCAGGATGTaGAGAAAGCTCCGCCCATTC +
Preference number: 5 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGSSCRM*RKLRPF
Trigger: GAATGGGCGGAGCTTTCTCAACATCCTGCATGATGA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAAAACTTGGCGTGTGTGTaGAGCAACTCAAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQNLACV*SNSNSA
Trigger: GGCACTGTTTGAGTTGCTCAACACACACGCCAAGTT...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGAGGGGGAGGAGGTGGCTaGATACCAGGCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGGGGGG*IPGRSS
Trigger: AGAAGATCTGCCTGGTATCAAGCCACCTCCTCCCCC...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCATTACGTGGCCCACCTaGAGCTGTCCACAGTTATGG +
Preference number: 5 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFITWPT*SCPQLW
Trigger: CCATAACTGTGGACAGCTCAAGGTGGGCCACGTAAT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: LYINTLTLLVACKASGIGIRAAS*CSLPRS
Trigger: ACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAAT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLIRAAS*CSLPRS
Trigger: ACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAAT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GCAGGAAGCAGTCTGTGTGAACTCTCCTGTGTCCTCACAGCCAAAGGCCTAGGCTCTCTCTCCTTGGTCTaGAAGGCCTCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: AGSSLCELSCVLTAKGLGSLSLV*KASAMI
Trigger: AATCATCGCTGAGGCCTTCAAGACCAAGGAGAGAGA...GCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TGTTCATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCAGCGCCGTGAGCGCTaGGTGCAGCTGGCGCACGTT +
Preference number: 5 (lower is better)
Translates to: CSCIRVGIRGQLALSSLFQRRER*VQLAHV
Trigger: AACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTG...AAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp CTCAAAAGCAAAACACCAGTGGGTTCTGTGCGTGTGAGACCTTCTTGCTGGGTCGACAGCACCAGCTTCTaGGAGCCTTTGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: LKSKTPVGSVRVRPSCWVDSTSF*EPLRAL
Trigger: CAAGGCTCTCAAAGGCTCCAAGAAGCTGGTGCTGTC...GACCCAGCAAGAAGGTCTCACACGCACAGAACCCACTGGTGTTTTGCTTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGAACTGGCGATCCACTaGGTCTGGTCCACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLELAIH*VWSTVV
Trigger: TACCACCGTGGACCAGACCAAGTGGATCGCCAGTTC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCAACTTGGCGTGTGTGTaGAGCAACTCAAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFNLACV*SNSNSA
Trigger: GGCACTGTTTGAGTTGCTCAACACACACGCCAAGTT...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AAATACCATAGGGGCACGGAGCCAGGAGGAAGGGGGTGCGACTGGTGTGAACAATCTTCTGAGGGGGATTaGACATCATCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: KYHRGTEPGGRGCDWCEQSSEGD*TSSTDT
Trigger: TGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAGA...TTGTTCACACCAGTCGCACCCCCTTCCTCCTGGCTCCGTGCCCCTATGGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATTTCTGGAACTGGGGTaGGCATGGGAGATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGFLELG*AWEMEA
Trigger: TGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAAA...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCGTCCGGGGCTGCTCCTaGCCATTCTTGTTCTTAGCG +
Preference number: 5 (lower is better)
Translates to: LYINTLTLLVACKASGIGVRGCS*PFLFLA
Trigger: CGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGAC...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGTCCGGGGCTGCTCCTaGCCATTCTTGTTCTTAGCG +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLVRGCS*PFLFLA
Trigger: CGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGAC...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCTCTCTCTCCTTGGTCTaGAAGGCCTCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFSLSLV*KASAMI
Trigger: AATCATCGCTGAGGCCTTCAAGACCAAGGAGAGAGA...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCAGCAGGTGCCTGGCTaGGTCGTCCAGCAGTGCACG +
Preference number: 5 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGQQVPG*VVQQCT
Trigger: CGTGCACTGCTGGACGACCAAGCCAGGCACCTGCTG...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GGTGGCAGTACCCCTCTCCAGCCTAGAGAAATGTACTCTGCCTTCCTTCCCTTCTCTTCTGAGGGGGATTaGACATCATCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: GGSTPLQPREMYSAFLPFSSEGD*TSSTDT
Trigger: TGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAGA...GAAGGGAAGGAAGGCAGAGTACATTTCTCTAGGCTGGAGAGGGGTACTGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTTTCTGGAACTGGGGTaGGCATGGGAGATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LYINTLTLLVACKASGIGFLELG*AWEMEA
Trigger: TGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAAA...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AGAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGGACAGCACCAGCTTCTaGGAGCCTTTGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: RRHIFLRCPLSPCPAHTRDSTSF*EPLRAL
Trigger: CAAGGCTCTCAAAGGCTCCAAGAAGCTGGTGCTGTC...CCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp CTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCATTACGTGGCCCACCTaGAGCTGTCCACAGTTATGG +
Preference number: 5 (lower is better)
Translates to: LYINTLTLLVACKASGIGITWPT*SCPQLW
Trigger: CCATAACTGTGGACAGCTCAAGGTGGGCCACGTAAT...GCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAACAGCGCCGTGAGCGCTaGGTGCAGCTGGCGCACGTT +
Preference number: 5 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQQRRER*VQLAHV
Trigger: AACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTG...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTAGGTGCCGGGATGACTaGAGCAGCTTCACTGCCTCA +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCRCRDD*SSFTAS
Trigger: TGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp ATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATAGGTGCCGGGATGACTaGAGCAGCTTCACTGCCTCA +
Preference number: 5 (lower is better)
Translates to: IRVGIRGQLALSSLFPPHRCRDD*SSFTAS
Trigger: TGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCT...ATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGAACTGGCGATCCACTaGGTCTGGTCCACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCELAIH*VWSTVV
Trigger: TACCACCGTGGACCAGACCAAGTGGATCGCCAGTTC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGAACTTGGCGTGTGTGTaGAGCAACTCAAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLNLACV*SNSNSA
Trigger: GGCACTGTTTGAGTTGCTCAACACACACGCCAAGTT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGGGATCTTCTGAGGGGGATTaGACATCATCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: YKYTDIAGRLQGLWDRLGSSEGD*TSSTDT
Trigger: TGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAGA...TCCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGTCCGGGGCTGCTCCTaGCCATTCTTGTTCTTAGCG +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCVRGCS*PFLFLA
Trigger: CGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGAC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGIRAAS*CSLPRS
Trigger: ACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAAT...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: EDISFLDAHCPHVQHTLGARDLS*TRRIWS
Trigger: GGACCAGATTCTGCGCGTCAACGATAAATCTCTAGC...ACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGACAGCACCAGCTTCTaGGAGCCTTTGAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCDSTSF*EPLRAL
Trigger: CAAGGCTCTCAAAGGCTCCAAGAAGCTGGTGCTGTC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTCCACCACATGGGTTCCTCATCATGCAGGATGTaGAGAAAGCTCCGCCCATTC +
Preference number: 5 (lower is better)
Translates to: WESEDNLHLVLSFHHMGSSSCRM*RKLRPF
Trigger: GAATGGGCGGAGCTTTCTCAACATCCTGCATGATGA...GGAACCCATGTGGTGGAAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp TGTTCATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTGAACTGGCGATCCACTaGGTCTGGTCCACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: CSCIRVGIRGQLALSSLFELAIH*VWSTVV
Trigger: TACCACCGTGGACCAGACCAAGTGGATCGCCAGTTC...AAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGAAAATCCTGGCTTGCTaGTCCCTTCTTCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLKILAC*SLLLCG
Trigger: ACCACACAGAAGAAGGGACAAGCAAGCCAGGATTTT...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp GTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCCTCTGGGATAGGCTGTCTTCTGAGGGGGATTaGACATCATCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: VYKYTDIAGRLQGLWDRLSSEGD*TSSTDT
Trigger: TGTGTCTGTGGATGATGTCAAATCCCCCTCAGAAGA...CAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTTTCTGGAACTGGGGTaGGCATGGGAGATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCFLELG*AWEMEA
Trigger: TGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAAA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGTCCGGGGCTGCTCCTaGCCATTCTTGTTCTTAGCG +
Preference number: 5 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGVRGCS*PFLFLA
Trigger: CGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGAC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp GTTATTGCTGACAGTTCTAGAGCTGGGCAACTCAAAAGCAAAACACCAGTGGGTGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VIADSSRAGQLKSKTPVGARDLS*TRRIWS
Trigger: GGACCAGATTCTGCGCGTCAACGATAAATCTCTAGC...ACCCACTGGTGTTTTGCTTTTGAGTTGCCCAGCTCTAGAACTGTCAGCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000133425.2
CDS-3UTR CAA 90 bp GAAGACATATCTTTCTTAGATGCCCACTGTCCCCATGTCCAGCACACACTAGGTAAAATCCTGGCTTGCTaGTCCCTTCTTCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: EDISFLDAHCPHVQHTLGKILAC*SLLLCG
Trigger: ACCACACAGAAGAAGGGACAAGCAAGCCAGGATTTT...ACCTAGTGTGTGCTGGACATGGGGACAGTGGGCATCTAAGAAAGATATGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTATTACGTGGCCCACCTaGAGCTGTCCACAGTTATGG +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCITWPT*SCPQLW
Trigger: CCATAACTGTGGACAGCTCAAGGTGGGCCACGTAAT...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCARDLS*TRRIWS
Trigger: GGACCAGATTCTGCGCGTCAACGATAAATCTCTAGC...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGTACTCTGCCTTCCTTCCCTTCACCTAACATAGTTTTATTGAGCCCCTACTGTTCTCTCTCCTTGGTCTaGAAGGCCTCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: CTLPSFPSPNIVLLSPYCSLSLV*KASAMI
Trigger: AATCATCGCTGAGGCCTTCAAGACCAAGGAGAGAGA...ACAGTAGGGGCTCAATAAAACTATGTTAGGTGAAGGGAAGGAAGGCAGAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp AAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGCGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KVISSVYKYTDIAGRLQGARDLS*TRRIWS
Trigger: GGACCAGATTCTGCGCGTCAACGATAAATCTCTAGC...GCCTTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS-3UTR CAA 90 bp TGTTCATGCATTCGTGTGGGAATCAGAGGACAACTTGCACTTAGTTCTCTCTTTAACTTGGCGTGTGTGTaGAGCAACTCAAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: CSCIRVGIRGQLALSSLFNLACV*SNSNSA
Trigger: GGCACTGTTTGAGTTGCTCAACACACACGCCAAGTT...AAAGAGAGAACTAAGTGCAAGTTGTCCTCTGATTCCCACACGAATGCATGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS-3UTR CAA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAGGGGGAGGAGGTGGCTaGATACCAGGCAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQGGGGG*IPGRSS
Trigger: AGAAGATCTGCCTGGTATCAAGCCACCTCCTCCCCC...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS-3UTR CAA 90 bp ATTAAAGTCATAAGCTCTGTATATAAATACACTGACATTGCTGGTCGCCTGCAAAACTTGGCGTGTGTGTaGAGCAACTCAAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: IKVISSVYKYTDIAGRLQNLACV*SNSNSA
Trigger: GGCACTGTTTGAGTTGCTCAACACACACGCCAAGTT...TTGCAGGCGACCAGCAATGTCAGTGTATTTATATACAGAGCTTATGACTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 90 bp GGCTCGCTCAGCAGCGCCGTGAGCGCTTGGTGCAGCTGGCGCACGTaGGCAGACAGCAGCCGCAACCCCGCGCCCCCGCCGCCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: GSLSSAVSAWCSWRT*ADSSRNPAPPPPPA
Trigger: GGCGGGCGGCGGCGGGGGCGCGGGGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 72 bp AGCAGCGCCGTGAGCGCTTGGTGCAGCTGGCGCACGTaGGCAGACAGCAGCCGCAACCCCGCGCCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: SSAVSAWCSWRT*ADSSRNPAPPP
Trigger: CGGCGGGGGCGCGGGGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp CGGGAGCGGCCCAGGCGGGCTGCCTGTAGGGGGTGGTaGCTGGCAGGTAGAGGCCCTCGGCCGTGTACTGGT +
Preference number: 6 (lower is better)
Translates to: RERPRRAACRGW*LAGRGPRPCTG
Trigger: ACCAGTACACGGCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGCCCGCCTGGGCCGCTCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp CGTCGGGAGCGGCCCAGGCGGGCTGCCTGTAGGGGGTaGTGGCTGGCAGGTAGAGGCCCTCGGCCGTGTACT +
Preference number: 6 (lower is better)
Translates to: RRERPRRAACRG*WLAGRGPRPCT
Trigger: AGTACACGGCCGAGGGCCTCTACCTGCCAGCCACCACCCCCTACAGGCAGCCCGCCTGGGCCGCTCCCGACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp GGCTCGCTCAGCAGCGCCGTGAGCGCTTGGTGCAGCTaGCGCACGTTGGCAGACAGCAGCCGCAACCCCGCG +
Preference number: 6 (lower is better)
Translates to: GSLSSAVSAWCS*RTLADSSRNPA
Trigger: CGCGGGGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp TCCCGCTCGGGCTCGCTCAGCAGCGCCGTGAGCGCTTaGTGCAGCTGGCGCACGTTGGCAGACAGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: SRSGSLSSAVSA*CSWRTLADSSR
Trigger: GCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCCCGAGCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 72 bp CTCCCGCTCGGGCTCGCTCAGCAGCGCCGTGAGCGCTaGGTGCAGCTGGCGCACGTTGGCAGACAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: LPLGLAQQRRER*VQLAHVGRQQP
Trigger: CGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCCCGAGCGGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS GCA 72 bp CGCTCGGGCTCGCTCAGCAGCGCCGTGAGCGCTTGGTaGAGCTGGCGCACGTTGGCAGACAGCAGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: RSGSLSSAVSAW*SWRTLADSSRN
Trigger: GTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCCCGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp GGGTGGACGTTGGCTCCAGCAGGCCGGGAGGTTTGTTaGCACCCTCCGCGGTCCTCTCCGTCCGGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: GWTLAPAGREVC*HPPRSSPSGAA
Trigger: AGCAGCCCCGGACGGAGAGGACCGCGGAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 72 bp AGGGTGGACGTTGGCTCCAGCAGGCCGGGAGGTTTGTaGGCACCCTCCGCGGTCCTCTCCGTCCGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RVDVGSSRPGGL*APSAVLSVRGC
Trigger: GCAGCCCCGGACGGAGAGGACCGCGGAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 90 bp AGTGAACTGCTCCCGCTCGGGCTCGCTCAGCAGCGCCGTGAGCGCTaGGTGCAGCTGGCGCACGTTGGCAGACAGCAGCCGCAACCCCGC +
Preference number: 6 (lower is better)
Translates to: SELLPLGLAQQRRER*VQLAHVGRQQPQPR
Trigger: GCGGGGTTGCGGCTGCTGTCTGCCAACGTGCGCCAGCTGCACCAAGCGCTCACGGCGCTGCTGAGCGAGCCCGAGCGGGAGCAGTTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 90 bp ACACGGACCAGGGTGGACGTTGGCTCCAGCAGGCCGGGAGGTTTGTaGGCACCCTCCGCGGTCCTCTCCGTCCGGGGCTGCTCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: TRTRVDVGSSRPGGL*APSAVLSVRGCSLP
Trigger: TGGCAAGGAGCAGCCCCGGACGGAGAGGACCGCGGAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 90 bp CTCACACGGACCAGGGTGGACGTTGGCTCCAGCAGGCCGGGAGGTTaGTTGGCACCCTCCGCGGTCCTCTCCGTCCGGGGCTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LTRTRVDVGSSRPGG*LAPSAVLSVRGCSL
Trigger: CAAGGAGCAGCCCCGGACGGAGAGGACCGCGGAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 72 bp AAGACGTTGCGGCGCGCGTGGTACGCGTTGAGGCAGTaGGTGAACTGCTCCCGCTCGGGCTCGCTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: KTLRRAWYALRQ*VNCSRSGSLSS
Trigger: GCTGCTGAGCGAGCCCGAGCGGGAGCAGTTCACTCACTGCCTCAACGCGTACCACGCGCGCCGCAACGTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS GCA 72 bp GGTCGTCCAGCAGTGCACGAGTCTGATTCCCCAGGCTaGTCAGGGTCACCTGGGAGCCGGCTGGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: GRPAVHESDSPG*SGSPGSRLGPC
Trigger: ACAAGGGCCCAGCCGGCTCCCAGGTGACCCTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCTGGACGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp CGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTTaGTCTGGTCCACGGTGGTACGTGCGTGGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RRFPRSGNWRST*SGPRWYVRGAA
Trigger: GGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp GGCAGCAGAAGACAGAGGTGCGGGGTCCTCCCTCCCTaGCTTCCGTGGCTGGCCAAGCAAGCGGTCATGACC +
Preference number: 6 (lower is better)
Translates to: GSRRQRCGVLPP*LPWLAKQAVMT
Trigger: GGTCATGACCGCTTGCTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCCGCACCTCTGTCTTCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 72 bp GCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTaGGTCTGGTCCACGGTGGTACGTGCGTGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: ATLSPIRELAIH*VWSTVVRAWGS
Trigger: GCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 90 bp GCTGAGTTGGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTaGGTCTGGTCCACGGTGGTACGTGCGTGGGGCAGCCTTCCGACG +
Preference number: 6 (lower is better)
Translates to: AELATLSPIRELAIH*VWSTVVRAWGSLPT
Trigger: CGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 90 bp TGCCCAGTGTGGCTGCACTTTTCCTCACACGGACCAGGGTGGACGTaGGCTCCAGCAGGCCGGGAGGTTTGTTGGCACCCTCCGCGGTCC +
Preference number: 6 (lower is better)
Translates to: CPVWLHFSSHGPGWT*APAGREVCWHPPRS
Trigger: GGACCGCGGAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 72 bp GGAGGCATAAATGGGGGAGGAGGGAGAGTCCTGTGCTaGGGAAGGTCCCGGAGTGGGAGCAGTCCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: GGINGGGGRVLC*GRSRSGSSPWR
Trigger: CCGCCAGGGACTGCTCCCACTCCGGGACCTTCCTCAGCACAGGACTCTCCCTCCTCCCCCATTTATGCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 72 bp AAGGTCCCGGAGTGGGAGCAGTCCCTGGCGGCGGGCTaGGGTTCCGTGGTGCTGAGAAGACAATGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: KVPEWEQSLAAG*GSVVLRRQCLS
Trigger: ACTCAGGCATTGTCTTCTCAGCACCACGGAACCGCAGCCCGCCGCCAGGGACTGCTCCCACTCCGGGACCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 72 bp CTTTCCCCGATCCGGGAACTGGCGATCCACTTGGTCTaGTCCACGGTGGTACGTGCGTGGGGCAGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: LSPIRELAIHLV*STVVRAWGSLP
Trigger: CGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp AGACAGAGGTGCGGGGTCCTCCCTCCCTGGCTTCCGTaGCTGGCCAAGCAAGCGGTCATGACCTTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: RQRCGVLPPWLP*LAKQAVMTLSQ
Trigger: CTGGCTCAAGGTCATGACCGCTTGCTTGGCCAGCCACGGAAGCCAGGGAGGGAGGACCCCGCACCTCTGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 90 bp GCACCCTCCGCGGTCCTCTCCGTCCGGGGCTGCTCCTTGCCATTCTaGTTCTTAGCGGATGCTGTCTGTCTGCCTCGGCCTGAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: APSAVLSVRGCSLPF*FLADAVCLPRPEVL
Trigger: CAGCACCTCAGGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGACGGAGAGGACCGCGGAGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 72 bp AAATGCCAAGGCCGTACTCTGCTCCACCTCGGATCGTaGGGCCCAAGGACCGGCCGTCCCCCAACACCAGGT +
Preference number: 6 (lower is better)
Translates to: KCQGRTLLHLGS*GPRTGRPPTPG
Trigger: ACCTGGTGTTGGGGGACGGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGCATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
ENSMUST00000144965.8
CDS GCA 72 bp ACTGGCGATCCACTTGGTCTGGTCCACGGTGGTACGTaGGTGGGGCAGCCTTCCGACGTCCTTCACCGTCAG +
Preference number: 6 (lower is better)
Translates to: TGDPLGLVHGGT*VGQPSDVLHRQ
Trigger: CTGACGGTGAAGGACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp GCGATCCACTTGGTCTGGTCCACGGTGGTACGTGCGTaGGGCAGCCTTCCGACGTCCTTCACCGTCAGGATG +
Preference number: 6 (lower is better)
Translates to: AIHLVWSTVVRA*GSLPTSFTVRM
Trigger: CATCCTGACGGTGAAGGACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp TCCGGGAACTGGCGATCCACTTGGTCTGGTCCACGGTaGTACGTGCGTGGGGCAGCCTTCCGACGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SGNWRSTWSGPR*YVRGAAFRRPS
Trigger: TGAAGGACGTCGGAAGGCTGCCCCACGCACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp TGGTGCCACCACGGTACTGGGCCAGGTAGTACATCATaGTGGCGCGCTCCTGCTCTGTCAGCAGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: WCHHGTGPGSTS*WRAPALSAGAW
Trigger: CCAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCATGATGTACTACCTGGCCCAGTACCGTGGTGGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp CGTGCCCTGACCTTCTCACCAAGGATAGGGCAGGGGTaGCTCACCCTGGCCGAGCTGACGGTTGTAGAGGTG +
Preference number: 6 (lower is better)
Translates to: RALTFSPRIGQG*LTLAELTVVEV
Trigger: CACCTCTACAACCGTCAGCTCGGCCAGGGTGAGCCACCCCTGCCCTATCCTTGGTGAGAAGGTCAGGGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063672.10
CDS CCA 72 bp GGCTGCACTTTTCCTCACACGGACCAGGGTGGACGTTaGCTCCAGCAGGCCGGGAGGTTTGTTGGCACCCTC +
Preference number: 6 (lower is better)
Translates to: GCTFPHTDQGGR*LQQAGRFVGTL
Trigger: GAGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGAGGAAAAGTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 72 bp GCCTCCGCGTGGGTCACCCGGGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCCCCGACCCGCAACCCT +
Preference number: 6 (lower is better)
Translates to: ASAWVTRARDLS*TRRIWSPTRNP
Trigger: AGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAACGATAAATCTCTAGCCCGGGTGACCCACGCGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS CAA 90 bp GTACATCATGGTGGCGCGCTCCTGCTCTGTCAGCAGGTGCCTGGCTaGGTCGTCCAGCAGTGCACGAGTCTGATTCCCCAGGCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: VHHGGALLLCQQVPG*VVQQCTSLIPQAAQ
Trigger: CTGAGCAGCCTGGGGAATCAGACTCGTGCACTGCTGGACGACCAAGCCAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCATGATGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 90 bp GGTTTGTTGGCACCCTCCGCGGTCCTCTCCGTCCGGGGCTGCTCCTaGCCATTCTTGTTCTTAGCGGATGCTGTCTGTCTGCCTCGGCCT +
Preference number: 6 (lower is better)
Translates to: GLLAPSAVLSVRGCS*PFLFLADAVCLPRP
Trigger: AGGCCGAGGCAGACAGACAGCATCCGCTAAGAACAAGAATGGCAAGGAGCAGCCCCGGACGGAGAGGACCGCGGAGGGTGCCAACAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 72 bp CCTCCGCGTGGGTCACCCGGGCTAGAGATTTATCGTTaGCGCGCAGAATCTGGTCCCCGACCCGCAACCCTT +
Preference number: 6 (lower is better)
Translates to: PPRGSPGLEIYR*RAESGPRPATL
Trigger: AAGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAACGATAAATCTCTAGCCCGGGTGACCCACGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS TCA 72 bp CACGCCACTGTCCTCGCTCAGGGTCTGCCCACTGTCTaGGAGCTGAGAGAGTGTGGAGGCTGTGCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: HATVLAQGLPTV*ELRECGGCASL
Trigger: CAGACTCGCACAGCCTCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACCCTGAGCGAGGACAGTGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 72 bp GAGGCTGGCGTGTGTTGGCACCGCCCTCAATGGCGATaGCCAGTGTGGCTGCACTTTTCCTCACACGGACCA +
Preference number: 6 (lower is better)
Translates to: EAGVCWHRPQWR*PVWLHFSSHGP
Trigger: TGGTCCGTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCAACACACGCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 72 bp CTGCTGAGTTGGCGACGCTTTCCCCGATCCGGGAACTaGCGATCCACTTGGTCTGGTCCACGGTGGTACGTG +
Preference number: 6 (lower is better)
Translates to: LLSWRRFPRSGN*RSTWSGPRWYV
Trigger: CACGTACCACCGTGGACCAGACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp TGCCACCACGGTACTGGGCCAGGTAGTACATCATGGTaGCGCGCTCCTGCTCTGTCAGCAGGTGCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: CHHGTGPGSTSW*RAPALSAGAWL
Trigger: AAGCCAGGCACCTGCTGACAGAGCAGGAGCGCGCCACCATGATGTACTACCTGGCCCAGTACCGTGGTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp CTGCGGTTCCGTGGTGCTGAGAAGACAATGCCTGAGTaGGCAGCAGAAGACAGAGGTGCGGGGTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LRFRGAEKTMPE*AAEDRGAGSSL
Trigger: GAGGGAGGACCCCGCACCTCTGTCTTCTGCTGCCCACTCAGGCATTGTCTTCTCAGCACCACGGAACCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 72 bp CCAGGGCCAGGTGGGTGTCCAGCGGCTTTCTGGAACTaGGGTTGGCATGGGAGATGGAGGCATAAATGGGGG +
Preference number: 6 (lower is better)
Translates to: PGPGGCPAAFWN*GWHGRWRHKWG
Trigger: CCCCCATTTATGCCTCCATCTCCCATGCCAACCCCAGTTCCAGAAAGCCGCTGGACACCCACCTGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 72 bp TGGGCAGAGGCTGGCGTGTGTTGGCACCGCCCTCAATaGCGATGCCCAGTGTGGCTGCACTTTTCCTCACAC +
Preference number: 6 (lower is better)
Translates to: WAEAGVCWHRPQ*RCPVWLHFSSH
Trigger: GTGTGAGGAAAAGTGCAGCCACACTGGGCATCGCCATTGAGGGCGGTGCCAACACACGCCAGCCTCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 72 bp TGGCTGCACTTTTCCTCACACGGACCAGGGTGGACGTaGGCTCCAGCAGGCCGGGAGGTTTGTTGGCACCCT +
Preference number: 6 (lower is better)
Translates to: WLHFSSHGPGWT*APAGREVCWHP
Trigger: AGGGTGCCAACAAACCTCCCGGCCTGCTGGAGCCAACGTCCACCCTGGTCCGTGTGAGGAAAAGTGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 72 bp TGGTCCCCTGGAAACCTGAGACCAGACCCTGCTGAGTaGGCGACGCTTTCCCCGATCCGGGAACTGGCGATC +
Preference number: 6 (lower is better)
Translates to: WSPGNLRPDPAE*ATLSPIRELAI
Trigger: GATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTCTGGTCTCAGGTTTCCAGGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
CDS CAA 90 bp GCCTTGACAGCCTCCGCGTGGGTCACCCGGGCTAGAGATTTATCGTaGACGCGCAGAATCTGGTCCCCGACCCGCAACCCTTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: ALTASAWVTRARDLS*TRRIWSPTRNPSFS
Trigger: AGAGAAGGAAGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAACGATAAATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS TCA 72 bp TGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTaGGTTGGCGACGCTTTCCCCGATCCGGGAACTGGC +
Preference number: 6 (lower is better)
Translates to: CPFFCVVPWKPC*VGDAFPDPGTG
Trigger: GCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS GCA 72 bp GTCCACACCAGTGATGTAAATGCCAAGGCCGTACTCTaGTCCACCTCGGATCGTGAGGCCCAAGGACCGGCC +
Preference number: 6 (lower is better)
Translates to: VHTSDVNAKAVL*STSDREAQGPA
Trigger: GGCCGGTCCTTGGGCCTCACGATCCGAGGTGGAGCAGAGTACGGCCTTGGCATTTACATCACTGGTGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
ENSMUST00000144965.8
CDS CCA 72 bp GGGCAGGCTGGAGGGAGGGGATGTGCTTCGACCCTGTaGGTCCACCCAGGTGTAGATGTGGTTGGTCACATA +
Preference number: 6 (lower is better)
Translates to: GQAGGRGCASTL*VHPGVDVVGHI
Trigger: TATGTGACCAACCACATCTACACCTGGGTGGACCCACAGGGTCGAAGCACATCCCCTCCCTCCAGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS CCA 72 bp CTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTGAGTTaGCGACGCTTTCCCCGATCCGGGAACTGGCGATCC +
Preference number: 6 (lower is better)
Translates to: LLLCGPLETLLS*RRFPRSGNWRS
Trigger: GGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS CCA 72 bp TCAGGGTCTGCCCACTGTCTGAGAGCTGAGAGAGTGTaGAGGTGCGAGTCTGGGGCAGAGCCCGCACTTCAT +
Preference number: 6 (lower is better)
Translates to: SGSAHCLRAERV*RCESGAEPALH
Trigger: ATGAAGTGCGGGCTCTGCCCCAGACTCGCACCTCCACACTCTCTCAGCTCTCAGACAGTGGGCAGACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102867.8
CDS CAA 72 bp CCTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTGAGTaGGCGACGCTTTCCCCGATCCGGGAACTGGCGATC +
Preference number: 6 (lower is better)
Translates to: PSSVWSPGNPAE*ATLSPIRELAI
Trigger: GATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS CAA 90 bp GGGTCACCTGGGAGCCGGCTGGGCCCTTGTAAAATCCTGGCTTGCTaGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTGAGTTGG +
Preference number: 6 (lower is better)
Translates to: GSPGSRLGPCKILAC*SLLLCGPLETLLSW
Trigger: CCAACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCAAGCCAGGATTTTACAAGGGCCCAGCCGGCTCCCAGGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS CAA 90 bp TCTTCTGTGTGGTCCCCTGGAAACCTGAGACCAGACCCTGCTGAGTaGGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTTGGTC +
Preference number: 6 (lower is better)
Translates to: SSVWSPGNLRPDPAE*ATLSPIRELAIHLV
Trigger: GACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTCTGGTCTCAGGTTTCCAGGGGACCACACAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
CDS GCA 72 bp TCACTGTCCGGACGGTGCACCTCCACCAGAACAAAGTaGTGGTTTGCACCCACGGCGTCAGGGTGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: SLSGRCTSTRTK*WFAPTASGCSE
Trigger: CTCTGAACACCCTGACGCCGTGGGTGCAAACCAGCACTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS GCA 72 bp CGGGCGGCCTCCTTGTGCTCCTTACCCCGAAGTGTCTaGCCATTCACTTCCAGAATTACGTGGCCCACCTTG +
Preference number: 6 (lower is better)
Translates to: RAASLCSLPRSV*PFTSRITWPTL
Trigger: CAAGGTGGGCCACGTAATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 72 bp ACCCGGGCTAGAGATTTATCGTTGACGCGCAGAATCTaGTCCCCGACCCGCAACCCTTCCTTCTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: TRARDLSLTRRI*SPTRNPSFSAR
Trigger: CCTGGCAGAGAAGGAAGGGTTGCGGGTCGGGGACCAGATTCTGCGCGTCAACGATAAATCTCTAGCCCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS CCA 72 bp TTCGACCCTGTGGGTCCACCCAGGTGTAGATGTGGTTaGTCACATAGCCCCCTGGGATACGCCCAGCTGAGT +
Preference number: 6 (lower is better)
Translates to: FDPVGPPRCRCG*SHSPLGYAQLS
Trigger: ACTCAGCTGGGCGTATCCCAGGGGGCTATGTGACCAACCACATCTACACCTGGGTGGACCCACAGGGTCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS CAA 72 bp GGGAGCCGGCTGGGCCCTTGTAAAATCCTGGCTTGCTaGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCCTG +
Preference number: 6 (lower is better)
Translates to: GSRLGPCKILAC*SLLLCGPLETL
Trigger: CAGGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCAAGCCAGGATTTTACAAGGGCCCAGCCGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS CAA 90 bp TTGCTTGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCCTGCTGAGTaGGCGACGCTTTCCCCGATCCGGGAACTGGCGATCCACTTGGTC +
Preference number: 6 (lower is better)
Translates to: LLVPSSVWSPGNPAE*ATLSPIRELAIHLV
Trigger: GACCAAGTGGATCGCCAGTTCCCGGATCGGGGAAAGCGTCGCCAACTCAGCAGGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
CDS TCA 72 bp CGCTGCTCTCTGCTTCAGAGCCTGGGTCCACACCAGTaGTGTAAATGCCAAGGCCGTACTCTGCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: RCSLLQSLGPHQ*CKCQGRTLLHL
Trigger: GAGGTGGAGCAGAGTACGGCCTTGGCATTTACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAGAGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
ENSMUST00000144965.8
CDS TCA 72 bp GTCCACAGTTATGGGCAGAACCTCCTCGCTGAATTGTaGCGATCCTGGGCAGAGGCTGGCGTGTGTTGGCAC +
Preference number: 6 (lower is better)
Translates to: VHSYGQNLLAEL*RSWAEAGVCWH
Trigger: GTGCCAACACACGCCAGCCTCTGCCCAGGATCGTCACAATTCAGCGAGGAGGTTCTGCCCATAACTGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 72 bp TGCTTGTCCCTTCTTCTGTGTGGTCCCCTGGAAACCTaGGACCAGACCCTGCTGAGTTGGCGACGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: CLSLLLCGPLET*DQTLLSWRRFP
Trigger: GGGAAAGCGTCGCCAACTCAGCAGGGTCTGGTCTCAGGTTTCCAGGGGACCACACAGAAGAAGGGACAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107393.8
CDS GCA 72 bp TTGAAGGCCTCAGCGATGATTCGGGCGGCCTCCTTGTaGTCCTTACCCCGAAGTGTCTGCCCATTCACTTCC +
Preference number: 6 (lower is better)
Translates to: LKASAMIRAASL*SLPRSVCPFTS
Trigger: GGAAGTGAATGGGCAGACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAATCATCGCTGAGGCCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CCA 72 bp TTCTTGGAGCCTTTGAGAGCCTTGACAGCCTCCGCGTaGGTCACCCGGGCTAGAGATTTATCGTTGACGCGC +
Preference number: 6 (lower is better)
Translates to: FLEPLRALTASA*VTRARDLSLTR
Trigger: GCGCGTCAACGATAAATCTCTAGCCCGGGTGACCCACGCGGAGGCTGTCAAGGCTCTCAAAGGCTCCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS CAA 72 bp GATTTGACATCATCCACAGACACATCCGGGAGAGCGTaGGTGCTGCCCTGGGTGGTCTCACCGGTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: DLTSSTDTSGRA*VLPWVVSPVPS
Trigger: GGAAGGAACCGGTGAGACCACCCAGGGCAGCACCAACGCTCTCCCGGATGTGTCTGTGGATGATGTCAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 72 bp GTCTTGAAGGCCTCAGCGATGATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGTGTCTGCCCATTCACT +
Preference number: 6 (lower is better)
Translates to: VLKASAMIRAAS*CSLPRSVCPFT
Trigger: AGTGAATGGGCAGACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAATCATCGCTGAGGCCTTCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 72 bp TCCGACGTCCTTCACCGTCAGGATGAGGTGCCGGGATaGCTTGAGCAGCTTCACTGCCTCATCATGCAGGAT +
Preference number: 6 (lower is better)
Translates to: SDVLHRQDEVPG*LEQLHCLIMQD
Trigger: ATCCTGCATGATGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGTGAAGGACGTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS GCA 72 bp CGCACTTCATTCACATCAGGCTCACTGTCCGGACGGTaGACCTCCACCAGAACAAAGTGCTGGTTTGCACCC +
Preference number: 6 (lower is better)
Translates to: RTSFTSGSLSGR*TSTRTKCWFAP
Trigger: GGGTGCAAACCAGCACTTTGTTCTGGTGGAGGTGCACCGTCCGGACAGTGAGCCTGATGTGAATGAAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS CAA 90 bp AGCCTTCCGACGTCCTTCACCGTCAGGATGAGGTGCCGGGATGACTaGAGCAGCTTCACTGCCTCATCATGCAGGATGTTGAGAAAGCTC +
Preference number: 6 (lower is better)
Translates to: SLPTSFTVRMRCRDD*SSFTASSCRMLRKL
Trigger: GAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGTGAAGGACGTCGGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 90 bp CTCTCCTTGGTCTTGAAGGCCTCAGCGATGATTCGGGCGGCCTCCTaGTGCTCCTTACCCCGAAGTGTCTGCCCATTCACTTCCAGAATT +
Preference number: 6 (lower is better)
Translates to: LSLVLKASAMIRAAS*CSLPRSVCPFTSRI
Trigger: AATTCTGGAAGTGAATGGGCAGACACTTCGGGGTAAGGAGCACAAGGAGGCCGCCCGAATCATCGCTGAGGCCTTCAAGACCAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000084510.8
ENSMUST00000095037.2
ENSMUST00000095038.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000119294.8
CDS TCA 72 bp GTGGTTGGTCACATAGCCCCCTGGGATACGCCCAGCTaGGTATACAGACAGCACCAGCTTCTTGGAGCCTTT +
Preference number: 6 (lower is better)
Translates to: VVGHIAPWDTPS*VYRQHQLLGAF
Trigger: AAAGGCTCCAAGAAGCTGGTGCTGTCTGTATACTCAGCTGGGCGTATCCCAGGGGGCTATGTGACCAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
CDS CAA 72 bp ACGTCCTTCACCGTCAGGATGAGGTGCCGGGATGACTaGAGCAGCTTCACTGCCTCATCATGCAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: TSFTVRMRCRDD*SSFTASSCRML
Trigger: CAACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCACCTCATCCTGACGGTGAAGGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CAA 90 bp TGCCGGGATGACTTGAGCAGCTTCACTGCCTCATCATGCAGGATGTaGAGAAAGCTCCGCCCATTCACCTCCAGAATCTGGTCTCCAACC +
Preference number: 6 (lower is better)
Translates to: CRDDLSSFTASSCRM*RKLRPFTSRIWSPT
Trigger: GGTTGGAGACCAGATTCTGGAGGTGAATGGGCGGAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAGTCATCCCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS GCA 72 bp CAGAATCTGGTCTCCAACCTTGAGGCCGCTGCTCTCTaGTTCAGAGCCTGGGTCCACACCAGTGATGTAAAT +
Preference number: 6 (lower is better)
Translates to: QNLVSNLEAAAL*FRAWVHTSDVN
Trigger: ATTTACATCACTGGTGTGGACCCAGGCTCTGAAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp ATGTTGAGAAAGCTCCGCCCATTCACCTCCAGAATCTaGTCTCCAACCTTGAGGCCGCTGCTCTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: MLRKLRPFTSRI*SPTLRPLLSAS
Trigger: TGAAGCAGAGAGCAGCGGCCTCAAGGTTGGAGACCAGATTCTGGAGGTGAATGGGCGGAGCTTTCTCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
CDS CCA 72 bp AGGTTCACCTTTTTCTCATCTCCACTCTGCAGGAGGTaGAGGGTACTCCTTCGGTCATCTTCACGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: RFTFFSSPLCRR*RVLLRSSSRCL
Trigger: GAGACAGCGTGAAGATGACCGAAGGAGTACCCTCCACCTCCTGCAGAGTGGAGATGAGAAAAAGGTGAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8
ENSMUST00000133425.2
ENSMUST00000144965.8
CDS CAA 72 bp GACTTGAGCAGCTTCACTGCCTCATCATGCAGGATGTaGAGAAAGCTCCGCCCATTCACCTCCAGAATCTGG +
Preference number: 6 (lower is better)
Translates to: DLSSFTASSCRM*RKLRPFTSRIW
Trigger: CCAGATTCTGGAGGTGAATGGGCGGAGCTTTCTCAACATCCTGCATGATGAGGCAGTGAAGCTGCTCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063650.10
ENSMUST00000063672.10
ENSMUST00000084510.8
ENSMUST00000102867.8
ENSMUST00000107393.8