Pregenerated sensors for WHAMM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045795Ensembl transcript IDs: ENSMUST00000165460.2, ENSMUST00000207123.2, ENSMUST00000209044.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCACTGCTGGCTGAGTGCTCTCAGCTCTCTGTTGTCACCAAGGTaGAGTTCCAGGTCAGGAGCCAGGCTCTGCAGCTCCTCGGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: WHCWLSALSSLLSPR*SSRSGARLCSSSGL Trigger: GAGCCCCGAGGAGCTGCAGAGCCTGGCTCCTGACCTGGAACTGCACCTTGGTGACAACAGAGAGCTGAGAGCACTCAGCCAGCAGTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR CCA 90 bp | GGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTaGGTCAGAGACCATTTCCTCATAATACAGATATACTATAAATAT | + |
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Preference number: 1 (lower is better) Translates to: GTFSTTPKQEELCFQ*VRDHFLIIQIYYKY Trigger: ATATTTATAGTATATCTGTATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR-3UTR GCA 90 bp | GACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAGCTAGGGTTGTGGGCCTaGCTGCATCTGTCAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: DKVLSPCPAYPAVSVVWQLGLWA*LHLSAG Trigger: TCCAGCTGACAGATGCAGGCAGGCCCACAACCCTAG...CTGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR CCA 90 bp | GACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAGGCTGACCTAGGGTTGTaGGCCTGCCTGCATCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: DKVLSPCPAYPAVSVVWQADLGL*ACLHLS Trigger: TGACAGATGCAGGCAGGCCCACAACCCTAGGTCAGC...CTGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAGTGACCCTAGGGTTGTGGGCCTaGCTGCATCTGTCAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GSILSHVYLRAVPAGPVTLGLWA*LHLSAG Trigger: TCCAGCTGACAGATGCAGGCAGGCCCACAACCCTAG...GGTCACTGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAGTGACCGCTGACCTAGGGTTGTaGGCCTGCCTGCATCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GSILSHVYLRAVPAGPVTADLGL*ACLHLS Trigger: TGACAGATGCAGGCAGGCCCACAACCCTAGGTCAGC...GGTCACTGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR TCA 90 bp | ATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCATTCTCAGGGCCTCGCTaGCCTAGGGTTGTGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IHGSILSHVYLRAVPAGPFSGPR*PRVVGL Trigger: CAGGCCCACAACCCTAGGTCAGCGAGGCCCTGAGAA...TGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR GCA 90 bp | AATACTGTGGTGCTGGTGAAGGTGTCTCAGACTTTGTTTGGCCTGCTGCAGTCTCTCTCCTGGAGCAGATaGGGCCCCGCTGAGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: NTVVLVKVSQTLFGLLQSLSWSR*GPAEPP Trigger: TGGAGGCTCAGCGGGGCCGCATCTGCTCCAGGAGAG...AGACTGCAGCAGGCCAAACAAAGTCTGAGACACCTTCACCAGCACCACAGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTGCAGCTCCTCGGGGCTCTCACACGGGTCGTAGTAGATCACTTCAGCCTCTCTGGATTTCAGCTTaGCTGTGTTTTAGACACAGC | + |
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Preference number: 2 (lower is better) Translates to: GSAAPRGSHTGRSRSLQPLWISA*LCFRHS Trigger: GCTGTGTCTAAAACACAGGCAAGCTGAAATCCAGAG...AGGCTGAAGTGATCTACTACGACCCGTGTGAGAGCCCCGAGGAGCTGCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGTTCTCAGGGCCTCGCTaGCCTAGGGTTGTGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QCLYMEAYCLMCTSGLSLFSGPR*PRVVGL Trigger: CAGGCCCACAACCCTAGGTCAGCGAGGCCCTGAGAA...CAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR CAA 90 bp | CAAGCCTTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATaGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAGTGACC | + |
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Preference number: 2 (lower is better) Translates to: QALKSEEPVFIHGSI*SHVYLRAVPAGPVT Trigger: GGTCACTGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAAGGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGGGTTGTGGGCCTGCCTaGATCTGTCAGCTGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: QCLYMEAYCLMCTSGLSLGCGPA*ICQLDS Trigger: GCTGTCCAGCTGACAGATGCAGGCAGGCCCACAACC...CAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGCTGGCACTGCTGGCTGAGTGCTCTCAGCTCTCTGTTGTCACCAAGGTGCTGCTCCATTTGTTTCTaGATTCCTGTTAGTGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: SRWHCWLSALSSLLSPRCCSICF*IPVSAV Trigger: AACAGCACTAACAGGAATGCAGAAACAAATGGAGCA...GCACCTTGGTGACAACAGAGAGCTGAGAGCACTCAGCCAGCAGTGCCAGCGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR-3UTR CCA 90 bp | GGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGGCAGTGAGTGTTGTGTaGCAGTTGGCACACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: GHFQLPPSRKSFAFSGSEAVSVV*QLAHLH Trigger: GTGAAGGTGTGCCAACTGCCACACAACACTCACTGC...CTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTCATAATACAGATAGGTTGTGGGCCTGCCTaGATCTGTCAGCTGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: QEELCFQWVRDHFLIIQIGCGPA*ICQLDS Trigger: GCTGTCCAGCTGACAGATGCAGGCAGGCCCACAACC...TATCTGTATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR-3UTR CCA 90 bp | AATACTGTGGTGCTGGTGAAGGTGTCTCAGACTTTGTTTGGCCTGCTGCAGTCTCTTCTTCAGCCTGTCTaGTCCATTCACTGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NTVVLVKVSQTLFGLLQSLLQPV*SIHWLP Trigger: AGGAAGCCAGTGAATGGACCAGACAGGCTGAAGAAG...AGACTGCAGCAGGCCAAACAAAGTCTGAGACACCTTCACCAGCACCACAGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCCAGTGACCCTAGAGTaGACAAAGTCCTGTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: QCLYMEAYCLMCTSGLSLPVTLE*TKSCPH Trigger: ATGGGGACAGGACTTTGTCCACTCTAGGGTCACTGG...CAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACGCAGTGAGTGTTGTGTaGCAGTTGGCACACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LKSEEPVFIHGSILSHVYAVSVV*QLAHLH Trigger: GTGAAGGTGTGCCAACTGCCACACAACACTCACTGC...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR CAA 90 bp | CTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTaGCTTTCAGTGGGTCAGAGACCATTTCCTCATAATACAGATATA | + |
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Preference number: 2 (lower is better) Translates to: LESWDIFNYPQAGRA*LSVGQRPFPHNTDI Trigger: TATATCTGTATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTCAGCATCTCAAGCTTGACATCATACAACTCCAACTGGATCTCATAACATCTTCCACCTTTCTCTaGATTTCAGCTTGCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ISQHLKLDIIQLQLDLITSSTFL*ISACLC Trigger: ACACAGGCAAGCTGAAATCCAGAGAAAGGTGGAAGA...TGTTATGAGATCCAGTTGGAGTTGTATGATGTCAAGCTTGAGATGCTGAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR CCA 72 bp | CTCAGGGCTGTCCCTGCAGGGCCAGTGACCCTAGAGTaGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCG | + |
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Preference number: 3 (lower is better) Translates to: LRAVPAGPVTLE*TKSCPHVQPTP Trigger: CGGGGTAGGCTGGACATGGGGACAGGACTTTGTCCACTCTAGGGTCACTGGCCCTGCAGGGACAGCCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR TCA 72 bp | GCAGTGAGTGTTGTGTGGCAGTTGGCACACCTTCACTaGCCTCCCCGTGTTGCAGCTTCTCAGGGCCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: AVSVVWQLAHLH*PPRVAASQGLA Trigger: AGCGAGGCCCTGAGAAGCTGCAACACGGGGAGGTCAGTGAAGGTGTGCCAACTGCCACACAACACTCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR GCA 72 bp | TGGCTGAGTGCTCTCAGCTCTCTGTTGTCACCAAGGTaGAGTTCCAGGTCAGGAGCCAGGCTCTGCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: WLSALSSLLSPR*SSRSGARLCSS Trigger: GGAGCTGCAGAGCCTGGCTCCTGACCTGGAACTGCACCTTGGTGACAACAGAGAGCTGAGAGCACTCAGCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTCCAGGTCAGGAGCCAGGCTCTGCAGCTCCTCGGGGCTCTCACACGGGTCGATTCACAGTGATGTCTaGGATAGAGCCCACTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: SSRSGARLCSSSGLSHGSIHSDV*DRAHCF Trigger: GAAGCAGTGGGCTCTATCCAAGACATCACTGTGAAT...CGACCCGTGTGAGAGCCCCGAGGAGCTGCAGAGCCTGGCTCCTGACCTGGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR TCA 72 bp | ACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTaGGTGTTGTGTGGCAGTTGGCACACCTTCACTGAC | + |
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Preference number: 3 (lower is better) Translates to: TKSCPHVQPTPQ*VLCGSWHTFTD Trigger: GTCAGTGAAGGTGTGCCAACTGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR TCA 72 bp | CGAGTGAAGAGGGTCTCAGGAGACCAGTTCCTGAGGTaGGCGATGCCGTTAGTGCCCTTAACACGAGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: RVKRVSGDQFLR*AMPLVPLTRAQ Trigger: TTGAGCTCGTGTTAAGGGCACTAACGGCATCGCTCACCTCAGGAACTGGTCTCCTGAGACCCTCTTCACTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR-3UTR CAA 90 bp | CCGCTGGCACTGCTGGCTGAGTGCTCTCAGCTCTCTGTTGTCACCAAGGTGCAGCTCAGCATCTCAAGCTaGACATCATACAACTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: PLALLAECSQLSVVTKVQLSISS*TSYNSN Trigger: GTTGGAGTTGTATGATGTCAAGCTTGAGATGCTGAG...CTGCACCTTGGTGACAACAGAGAGCTGAGAGCACTCAGCCAGCAGTGCCAGCGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCGTTCACATTCAAGCCTaGAAGTCTGAGGAGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: TGILGHFQLPPSRKSFAFVHIQA*KSEEPV Trigger: CACTGGCTCCTCAGACTTCAAGGCTTGAATGTGAAC...GAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR TCA 72 bp | GAAGGTGTCTCAGACTTTGTTTGGCCTGCTGCAGTCTaGGCTGATGATTTTCTCGGCAGTGATCCTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: EGVSDFVWPAAV*ADDFLGSDPFC Trigger: ACAGAAAGGATCACTGCCGAGAAAATCATCAGCTCAGACTGCAGCAGGCCAAACAAAGTCTGAGACACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCATTTCTCAGCATCTCAAGCTTGACATCATACAACTCCAACTGGATCTCCGAGCTAACATGAGCTaGAGATTTTCTAGCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LLISQHLKLDIIQLQLDLRANMS*RFSSLG Trigger: GCCCAGGCTAGAAAATCTCAAGCTCATGTTAGCTCG...GAGATCCAGTTGGAGTTGTATGATGTCAAGCTTGAGATGCTGAGAAATGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| 3UTR GCA 72 bp | GGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTaGTTTCAGTGGGTCAGAGACCATTTCCTCATAATA | + |
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Preference number: 3 (lower is better) Translates to: GTFSTTPKQEEL*FQWVRDHFLII Trigger: TATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR CCA 72 bp | TCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTaGGTCAGAGACCATTTCCTCATAATACAGATATAC | + |
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Preference number: 3 (lower is better) Translates to: STTPKQEELCFQ*VRDHFLIIQIY Trigger: GTATATCTGTATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR TCA 72 bp | TTGCTAAAATCATGTTCACATTCAAGCCTTGAAGTCTaGGGAGCCAGTGTTTATACATGGAAGCATATTGTC | + |
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Preference number: 3 (lower is better) Translates to: LLKSCSHSSLEV*GASVYTWKHIV Trigger: GACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAAGGCTTGAATGTGAACATGATTTTAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | CAGGGCTGTCCCTGCAGGGCCAGTGACCCTAGAGTGGACAAAGTCCTGTCCCCAACCAGGAAACGCAGCTaGTGGCGCTCGGGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: QGCPCRASDPRVDKVLSPTRKRS*WRSGSG Trigger: CCCGGAGCCCGAGCGCCATCAGCTGCGTTTCCTGGT...TGGGGACAGGACTTTGTCCACTCTAGGGTCACTGGCCCTGCAGGGACAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR TCA 90 bp | GACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAGCAGATGCGGCCCCGCTaGGCCTCCAGCCGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: DKVLSPCPAYPAVSVVWQQMRPR*ASSRWH Trigger: GTGCCAGCGGCTGGAGGCTCAGCGGGGCCGCATCTG...CTGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | AGCCGCTGGCACTGCTGGCTGAGTGCTCTCAGCTCTCTGTTGTCACCAAGGTGCTGCGGTCGTGACAGGTaGCGGCGAACTGGCCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SRWHCWLSALSSLLSPRCCGRDR*RRTGPS Trigger: CGAAGGGCCAGTTCGCCGTCACCTGTCACGACCGCA...GCACCTTGGTGACAACAGAGAGCTGAGAGCACTCAGCCAGCAGTGCCAGCGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| CDS-3UTR GCA 90 bp | GGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCACTCTCCTGGAGCAGATaGGGCCCCGCTGAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GQSPVPMSSLPRSECCVALSWSR*GPAEPP Trigger: TGGAGGCTCAGCGGGGCCGCATCTGCTCCAGGAGAG...TGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR GCA 90 bp | GTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAGTTGGCACACCTTCCGGAGAGAGGCTTTaGCCTGCCGGAGAGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VPMSSLPRSECCVAVGTPSGERL*PAGERP Trigger: TGGCCTCTCTCCGGCAGGGCAAAGCCTCTCTCCGGA...AGGTGTGCCAACTGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAGTGACCTGCGGTCGTGACAGGTaGCGGCGAACTGGCCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: GSILSHVYLRAVPAGPVTCGRDR*RRTGPS Trigger: CGAAGGGCCAGTTCGCCGTCACCTGTCACGACCGCA...GGTCACTGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| 3UTR CAA 72 bp | CGTGTTGCAGCTTCTCAGGGCCTCGCTGACCTAGGGTaGTGGGCCTGCCTGCATCTGTCAGCTGGACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RVAASQGLADLG*WACLHLSAGQQ Trigger: TTGCTGTCCAGCTGACAGATGCAGGCAGGCCCACAACCCTAGGTCAGCGAGGCCCTGAGAAGCTGCAACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | TGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGCAGATGCGGCCCCGCTaGGCCTCCAGCCGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: WDIFNYPQAGRALLSVGQQMRPR*ASSRWH Trigger: GTGCCAGCGGCTGGAGGCTCAGCGGGGCCGCATCTG...CTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR TCA 90 bp | AGCACGAGTGAAGAGGGTCTCAGGAGACCAGTTCCTGAGGTGAGCGATGCCGTTTCTCCAGGGCTTCTCTaGTGCTCCTCTCCAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: STSEEGLRRPVPEVSDAVSPGLL*CSSPGR Trigger: GCGACCTGGAGAGGAGCATCAGAGAAGCCCTGGAGA...AACGGCATCGCTCACCTCAGGAACTGGTCTCCTGAGACCCTCTTCACTCGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR GCA 90 bp | TCAGCTTGCCTGTGTTTTAGACACAGCTCTTTGGCTCTCATAAGCTGCAGAGTCTGCCGGCACAGCTCCTaGAGCGCCGAGTCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SACLCFRHSSLALISCRVCRHSS*SAESPG Trigger: CCCTGGCGACTCGGCGCTGCAGGAGCTGTGCCGGCA...GACTCTGCAGCTTATGAGAGCCAAAGAGCTGTGTCTAAAACACAGGCAAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| CDS-3UTR TCA 90 bp | TCAGCTTGCCTGTGTTTTAGACACAGCTCTTTGGCTCTCATAAGCTGCAGAGTCACCAGGAAACGCAGCTaGTGGCGCTCGGGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SACLCFRHSSLALISCRVTRKRS*WRSGSG Trigger: CCCGGAGCCCGAGCGCCATCAGCTGCGTTTCCTGGT...GACTCTGCAGCTTATGAGAGCCAAAGAGCTGTGTCTAAAACACAGGCAAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207123.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGTCCCTGCAGGGCCAGTGACCCTAGAGTGGACAAAGTCCTGTCCCCAGTGACAGATCTTCACTaGATCCAGACAGTGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QGCPCRASDPRVDKVLSPVTDLH*IQTVSG Trigger: ACCAGACACTGTCTGGATCCAGTGAAGATCTGTCAC...TGGGGACAGGACTTTGTCCACTCTAGGGTCACTGGCCCTGCAGGGACAGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR TCA 90 bp | CAGGGCTGTCCCTGCAGGGCCAGTGACCCTAGAGTGGACAAAGTCCTGTCCCCAATCATTGTCCTCCTCTaGGTCGGCAGAAACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGCPCRASDPRVDKVLSPIIVLL*VGRNFL Trigger: AAGAAAGTTTCTGCCGACTCAGAGGAGGACAATGAT...TGGGGACAGGACTTTGTCCACTCTAGGGTCACTGGCCCTGCAGGGACAGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR GCA 90 bp | AACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTTCCGGAGAGAGGCTTTaGCCTGCCGGAGAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NYPQAGRALLSVGQRPFPSGERL*PAGERP Trigger: TGGCCTCTCTCCGGCAGGGCAAAGCCTCTCTCCGGA...AGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CCA 90 bp | ATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAAGCCGCTGGCACTGCTaGCTGAGTGCTCTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHGSILSHVYLRAVPAGPSRWHC*LSALSS Trigger: AGAGCTGAGAGCACTCAGCCAGCAGTGCCAGCGGCT...TGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTCATAATACAGATATGCCGGCACAGCTCCTaGAGCGCCGAGTCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QEELCFQWVRDHFLIIQICRHSS*SAESPG Trigger: CCCTGGCGACTCGGCGCTGCAGGAGCTGTGCCGGCA...TATCTGTATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CCA 90 bp | CCCTTAACACGAGCTCAACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAAGCCGCTGGCACTGCTaGCTGAGTGCTCTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTRAQLESWDIFNYPQASRWHC*LSALSS Trigger: AGAGCTGAGAGCACTCAGCCAGCAGTGCCAGCGGCT...TGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGTTGAGCTCGTGTTAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTGTCCCTGCAGGGCCAGTGACCCTAGAGTGGACAAAGTCCTGTCCCCAGCAGGTTTGACACCATaGACTCTGAACAAGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGCPCRASDPRVDKVLSPAGLTP*TLNKLF Trigger: AAACAACTTGTTCAGAGTCCATGGTGTCAAACCTGC...TGGGGACAGGACTTTGTCCACTCTAGGGTCACTGGCCCTGCAGGGACAGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | ATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCACTGCCACAGGGGTCTTaGTGCTCAGGGGGTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IFNYPQAGRALLSVGQRPLPQGS*CSGGLT Trigger: TGTGAGACCCCCTGAGCATCAAGACCCCTGTGGCAG...TGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGTCCCTGCAGGGCCAGTGACCCTAGAGTGGACAAAGTCCTGTCCCCATGCTCCATTTGTTTCTaGATTCCTGTTAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGCPCRASDPRVDKVLSPCSICF*IPVSAV Trigger: AACAGCACTAACAGGAATGCAGAAACAAATGGAGCA...TGGGGACAGGACTTTGTCCACTCTAGGGTCACTGGCCCTGCAGGGACAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR GCA 90 bp | ACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGAGAGGCTTTGCCCTaGCGGAGAGAGGCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TGILGHFQLPPSRKSFAFREALP*RREAST Trigger: AGTGCTGGCCTCTCTCCGGCAGGGCAAAGCCTCTCT...GAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR CCA 90 bp | GGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACTGAGGTGCCAGGATaGGGCAAGGTGGGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHFQLPPSRKSFAFSGSETEVPG*GKVGVS Trigger: AGAAACGCCCACCTTGCCCCATCCTGGCACCTCAGT...CTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR TCA 90 bp | ACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTCCCAGAACTTGTTCATTaGCTGAGGTGCCAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTPKQEELCFQWVRDHFLPELVH*LRCQDG Trigger: CCCATCCTGGCACCTCAGTCAATGAACAAGTTCTGG...GAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR GCA 90 bp | TGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGGCACTGCTGGCTGAGTaGTCTCAGCTCTCTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WDIFNYPQAGRALLSVGQALLAE*SQLSVV Trigger: GACAACAGAGAGCTGAGAGCACTCAGCCAGCAGTGC...CTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR GCA 90 bp | AACACGAGCTCAACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGCAGCACTTCCGGTTTTaGTGGAGGCAGGATGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTSSTGILGHFQLPPSRKQHFRF*WRQDEL Trigger: CAGCTCATCCTGCCTCCAGCAAAACCGGAAGTGCTG...CTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGTTGAGCTCGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR GCA 90 bp | TTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCTGGACAGGGACACTaGCACAGGGGTCTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIHGSILSHVYLRAVPAGPGQGH*HRGLDA Trigger: AGCATCAAGACCCCTGTGGCAGTGTCCCTGTCCAGG...CCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR GCA 90 bp | TGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGAGAGAGGCTTTGCCCTaGCGGAGAGAGGCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLYMEAYCLMCTSGLSLQREALP*RREAST Trigger: AGTGCTGGCCTCTCTCCGGCAGGGCAAAGCCTCTCT...CTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR GCA 90 bp | ACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCTCTCCAGGTCGCTGGTaGTCTTCTTGCCGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGILGHFQLPPSRKSFAFSPGRW*SSCRDP Trigger: TGGATCCCGGCAAGAAGAGCACCAGCGACCTGGAGA...GAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR GCA 90 bp | TTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGTCTCCAGGTCGCTGGTaGTCTTCTTGCCGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIHGSILSHVYLRAVPAGSPGRW*SSCRDP Trigger: TGGATCCCGGCAAGAAGAGCACCAGCGACCTGGAGA...CCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CCA 90 bp | GGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAGCAGGTTTGACACCATaGACTCTGAACAAGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQSPVPMSSLPRSECCVAAGLTP*TLNKLF Trigger: AAACAACTTGTTCAGAGTCCATGGTGTCAAACCTGC...TGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CCA 90 bp | GGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAGATCCAGACAGTGTCTaGTCACTAACAGGAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQSPVPMSSLPRSECCVADPDSV*SLTGTK Trigger: TTTTGTTCCTGTTAGTGACCAGACACTGTCTGGATC...TGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CCA 90 bp | AACACGAGCTCAACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGACACCTTGGCCCGTGTaGACTTTCTTCAGCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: NTSSTGILGHFQLPPSRKTPWPV*TFFSCT Trigger: CGTGCAGCTGAAGAAAGTCCACACGGGCCAAGGTGT...CTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGTTGAGCTCGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR GCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCTCCTGGAGCAGATaGGGCCCCGCTGAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSEEPVFIHGSILSHVYLSWSR*GPAEPP Trigger: TGGAGGCTCAGCGGGGCCGCATCTGCTCCAGGAGAG...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | CCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTCATAATATGGCCTGCTGCAGTCTaGGCTGATGATTTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKQEELCFQWVRDHFLIIWPAAV*ADDFLG Trigger: GCCGAGAAAATCATCAGCTCAGACTGCAGCAGGCCA...TATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGTGGCCTGCTGCAGTCTaGGCTGATGATTTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCLYMEAYCLMCTSGLSLWPAAV*ADDFLG Trigger: GCCGAGAAAATCATCAGCTCAGACTGCAGCAGGCCA...CAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR GCA 90 bp | AGTGGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGTGCTCCATTTGTTTCTaGATTCCTGTTAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGQSPVPMSSLPRSECCVCSICF*IPVSAV Trigger: AACAGCACTAACAGGAATGCAGAAACAAATGGAGCA...CACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGACACCTTGGCCCGTGTaGACTTTCTTCAGCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CLYMEAYCLMCTSGLSLQTPWPV*TFFSCT Trigger: CGTGCAGCTGAAGAAAGTCCACACGGGCCAAGGTGT...CTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR CAA 72 bp | AAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATaGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSEEPVFIHGSI*SHVYLRAVPAG Trigger: CCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | ACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAACTTGTTCATTGACTaGGGTGCCAGGATGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGILGHFQLPPSRKSFAFNLFID*GARMGQ Trigger: TTGCCCCATCCTGGCACCTCAGTCAATGAACAAGTT...GAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACTCTCCAGGGCTTCTCTaGTGCTCCTCTCCAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSEEPVFIHGSILSHVYSPGLL*CSSPGR Trigger: GCGACCTGGAGAGGAGCATCAGAGAAGCCCTGGAGA...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR GCA 90 bp | AAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCGCACTGCTGGCTGAGTaGTCTCAGCTCTCTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSEEPVFIHGSILSHVYLALLAE*SQLSVV Trigger: GACAACAGAGAGCTGAGAGCACTCAGCCAGCAGTGC...GAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACACTGAGGTGCCAGGATaGGGCAAGGTGGGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSEEPVFIHGSILSHVYTEVPG*GKVGVS Trigger: AGAAACGCCCACCTTGCCCCATCCTGGCACCTCAGT...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | AACACGAGCTCAACTGGAATCCTGGGACATTTTCAACTACCCCCAAGCAGGAAGTCAGCATCTCAAGCTTaGCATCATACAACTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: NTSSTGILGHFQLPPSRKSASQA*HHTTPT Trigger: AGTTGGAGTTGTATGATGTCAAGCTTGAGATGCTGA...CTTCCTGCTTGGGGGTAGTTGAAAATGTCCCAGGATTCCAGTTGAGCTCGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CCA 90 bp | AAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCCACTTCCGGTTTTGCTaGAGGCAGGATGAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSEEPVFIHGSILSHVYLHFRFC*RQDELS Trigger: AGACAGCTCATCCTGCCTCCAGCAAAACCGGAAGTG...GAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCCAGAACTTGTTCATTaGCTGAGGTGCCAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSEEPVFIHGSILSHVYPELVH*LRCQDG Trigger: CCCATCCTGGCACCTCAGTCAATGAACAAGTTCTGG...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CCA 90 bp | AAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCCTTCTTCAGCCTGTCTaGTCCATTCACTGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSEEPVFIHGSILSHVYLLLQPV*SIHWLP Trigger: AGGAAGCCAGTGAATGGACCAGACAGGCTGAAGAAG...GAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| 3UTR CAA 72 bp | TGGGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTaGCTTTCAGTGGGTCAGAGACCATTTCCTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: WDIFNYPQAGRA*LSVGQRPFPHN Trigger: ATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACAACTTGTTCATTGACTaGGGTGCCAGGATGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSEEPVFIHGSILSHVYNLFID*GARMGQ Trigger: TTGCCCCATCCTGGCACCTCAGTCAATGAACAAGTT...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTCATAATACAGATAATCATTGTCCTCCTCTaGGTCGGCAGAAACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEELCFQWVRDHFLIIQIIIVLL*VGRNFL Trigger: AAGAAAGTTTCTGCCGACTCAGAGGAGGACAATGAT...TATCTGTATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CCA 90 bp | AAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCTCTTCCACCTTTCTCTaGATTTCAGCTTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSEEPVFIHGSILSHVYLSSTFL*ISACLC Trigger: ACACAGGCAAGCTGAAATCCAGAGAAAGGTGGAAGA...GAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCGCTCAAGGGTTTTCTaGCGTTCATGGTCTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKSEEPVFIHGSILSHVYRSRVF*RSWSIH Trigger: ATGGATAGACCATGAACGCCAGAAAACCCTTGAGCG...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCTGGATTTCAGCTTaGCTGTGTTTTAGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSEEPVFIHGSILSHVYLWISA*LCFRHS Trigger: GCTGTGTCTAAAACACAGGCAAGCTGAAATCCAGAG...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTCATAATACAGATACTAAATTCTGATGAGTaGTACCTTGAAAAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QEELCFQWVRDHFLIIQILNSDE*YLEKRT Trigger: TGTCCTCTTTTCAAGGTACCACTCATCAGAATTTAG...TATCTGTATTATGAGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
||
| CDS CCA 90 bp | GGCTTTGCCCTGCCGGAGAGAGGCCAGCACTTCATCCATAGAGCCTaGACCCTGGTAGTCACATGGTCTCCCAGCAGATGGGTCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: GFALPERGQHFIHRA*TLVVTWSPSRWVTR Trigger: GCGTGTGACCCATCTGCTGGGAGACCATGTGACTACCAGGGTCCAGGCTCTATGGATGAAGTGCTGGCCTCTCTCCGGCAGGGCAAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGTTCCGGAGAGAGGCTTaGCCCTGCCGGAGAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGQSPVPMSSLPRSECCVFRREA*PCRREA Trigger: GGCCTCTCTCCGGCAGGGCAAAGCCTCTCTCCGGAA...CACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
||
| CDS CCA 90 bp | AGGTCGCTGGTGCTCTTCTTGCCGGGATCCACACCTTGGCCCGTGTaGACTTTCTTCAGCTGCACGCCCTGTCTGATGGCAGCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: RSLVLFLPGSTPWPV*TFFSCTPCLMAART Trigger: AGTTCTGGCTGCCATCAGACAGGGCGTGCAGCTGAAGAAAGTCCACACGGGCCAAGGTGTGGATCCCGGCAAGAAGAGCACCAGCGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAGTGACCACTGCCACAGGGGTCTaGATGCTCAGGGGGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSILSHVYLRAVPAGPVTTATGV*MLRGSH Trigger: GTGAGACCCCCTGAGCATCAAGACCCCTGTGGCAGT...GGTCACTGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS CCA 90 bp | GTCTCACACTGGCTTCAGGTAAGGGAACAGCACTTCCGGTTTTGCTaGAGGCAGGATGAGCTGTCTTGTGGTGGTGAGCCGTTGAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: VSHWLQVREQHFRFC*RQDELSCGGEPLRA Trigger: GGCTCTCAACGGCTCACCACCACAAGACAGCTCATCCTGCCTCCAGCAAAACCGGAAGTGCTGTTCCCTTACCTGAAGCCAGTGTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CAA 90 bp | TGGCACACCTTCACTGACCTCCCCGTGTTGCAGCTTCTCAGGGCCTCGCTGACCTCGGCAGAAACTTTCTaGATTCTCTCCAGGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: WHTFTDLPVLQLLRASLTSAETF*ILSRAS Trigger: AGAAGCCCTGGAGAGAATCAAGAAAGTTTCTGCCGA...GGTCAGCGAGGCCCTGAGAAGCTGCAACACGGGGAGGTCAGTGAAGGTGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | GGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAAAGGTGTCTCAGACTTaGTTTGGCCTGCTGCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: GQSPVPMSSLPRSECCVAKVSQT*FGLLQS Trigger: AGACTGCAGCAGGCCAAACAAAGTCTGAGACACCTT...TGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | AGCACGAGTGAAGAGGGTCTCAGGAGACCAGTTCCTGAGGTGAGCGATGCCGTTAAGGTGTCTCAGACTTaGTTTGGCCTGCTGCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: STSEEGLRRPVPEVSDAVKVSQT*FGLLQS Trigger: AGACTGCAGCAGGCCAAACAAAGTCTGAGACACCTT...AACGGCATCGCTCACCTCAGGAACTGGTCTCCTGAGACCCTCTTCACTCGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CAA 90 bp | AGTGGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGCTGATGAGTGGTACCTaGAAAAGAGGACAGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SGQSPVPMSSLPRSECCVLMSGT*KRGQSR Trigger: CCTGCTCTGTCCTCTTTTCAAGGTACCACTCATCAG...CACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS CCA 90 bp | GGCTGTGGTGGTAGTGACAGATCTTCACTGGATCCAGACAGTGTCTaGTCACTAACAGGAACAAAAGCCTGGACAGGGACACTGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: GCGGSDRSSLDPDSV*SLTGTKAWTGTLPQ Trigger: CTGTGGCAGTGTCCCTGTCCAGGCTTTTGTTCCTGTTAGTGACCAGACACTGTCTGGATCCAGTGAAGATCTGTCACTACCACCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CAA 90 bp | TGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAGTGACCGAGCTAACATGAGCTaGAGATTTTCTAGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: WKHIVSCVPQGCPCRASDRANMS*RFSSLG Trigger: GCCCAGGCTAGAAAATCTCAAGCTCATGTTAGCTCG...GTCACTGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGGCAGTTTGTCTCTCTTCATTaGAATACTGTGGTGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: DKVLSPCPAYPAVSVVWQFVSLH*NTVVLV Trigger: CACCAGCACCACAGTATTCAAATGAAGAGAGACAAA...CTGCCACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | AGTGGACAAAGTCCTGTCCCCATGTCCAGCCTACCCCGCAGTGAGTGTTGTGTGTGGACTCTGAACAAGTaGTTTTCAGTGCAGACCGAT | + |
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Preference number: 5 (lower is better) Translates to: SGQSPVPMSSLPRSECCVWTLNK*FSVQTD Trigger: ATCGGTCTGCACTGAAAACAACTTGTTCAGAGTCCA...CACACAACACTCACTGCGGGGTAGGCTGGACATGGGGACAGGACTTTGTCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATGTGGTGGTGAGCCGTaGAGAGCCTCTTCTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: IFNYPQAGRALLSVGQRPCGGEP*RASSES Trigger: GCTCTCAGAAGAGGCTCTCAACGGCTCACCACCACA...TGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CAA 90 bp | ATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCAGCCAGAACTTGTTCATaGACTGAGGTGCCAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: IHGSILSHVYLRAVPAGPARTCS*TEVPGW Trigger: CCATCCTGGCACCTCAGTCAATGAACAAGTTCTGGC...TGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | TTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGGCTCTCAGCTCTCTGTaGTCACCAAGGTGCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: FIHGSILSHVYLRAVPAGALSSL*SPRCSS Trigger: GGAACTGCACCTTGGTGACAACAGAGAGCTGAGAGC...CCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | TTGAAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACTTCCGGAGAGAGGCTTaGCCCTGCCGGAGAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LKSEEPVFIHGSILSHVYFRREA*PCRREA Trigger: GGCCTCTCTCCGGCAGGGCAAAGCCTCTCTCCGGAA...GTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | AACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGACCATTTCCTGCCAGAACTTGTTCATaGACTGAGGTGCCAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: NYPQAGRALLSVGQRPFPARTCS*TEVPGW Trigger: CCATCCTGGCACCTCAGTCAATGAACAAGTTCTGGC...AGGAAATGGTCTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGGCTCTCAGCTCTCTGTaGTCACCAAGGTGCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: QCLYMEAYCLMCTSGLSLALSSL*SPRCSS Trigger: GGAACTGCACCTTGGTGACAACAGAGAGCTGAGAGC...CAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | GGACATTTTCAACTACCCCCAAGCAGGAAGAGCTTTGCTTTCAGTGGGTCAGAGATTCACAGTGATGTCTaGGATAGAGCCCACTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GHFQLPPSRKSFAFSGSEIHSDV*DRAHCF Trigger: GAAGCAGTGGGCTCTATCCAAGACATCACTGTGAAT...CTCTGACCCACTGAAAGCAAAGCTCTTCCTGCTTGGGGGTAGTTGAAAATGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS-3UTR CAA 90 bp | TTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCGAGCTAACATGAGCTaGAGATTTTCTAGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: FIHGSILSHVYLRAVPAGRANMS*RFSSLG Trigger: GCCCAGGCTAGAAAATCTCAAGCTCATGTTAGCTCG...CCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | ATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGGGCCACTCAGCATCTCAAGCTaGACATCATACAACTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: IHGSILSHVYLRAVPAGPLSISS*TSYNSN Trigger: GTTGGAGTTGTATGATGTCAAGCTTGAGATGCTGAG...TGGCCCTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | TGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGCAGATTCACAGTGATGTCTaGGATAGAGCCCACTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: CLYMEAYCLMCTSGLSLQIHSDV*DRAHCF Trigger: GAAGCAGTGGGCTCTATCCAAGACATCACTGTGAAT...CTGCAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCAGGGCTGTCCCTGTGGACTCTGAACAAGTaGTTTTCAGTGCAGACCGAT | + |
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Preference number: 5 (lower is better) Translates to: QCLYMEAYCLMCTSGLSLWTLNK*FSVQTD Trigger: ATCGGTCTGCACTGAAAACAACTTGTTCAGAGTCCA...CAGGGACAGCCCTGAGGTACACATGAGACAATATGCTTCCATGTATAAACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCTCGGCAGAAACTTTCTaGATTCTCTCCAGGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: KSEEPVFIHGSILSHVYLSAETF*ILSRAS Trigger: AGAAGCCCTGGAGAGAATCAAGAAAGTTTCTGCCGA...GAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTGAGGAGCCAGTGTTTATACATGGAAGCATATTGTCTCATGTGTACCTCTTTGTCTCTCTTCATTaGAATACTGTGGTGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: KSEEPVFIHGSILSHVYLFVSLH*NTVVLV Trigger: CACCAGCACCACAGTATTCAAATGAAGAGAGACAAA...GAGGTACACATGAGACAATATGCTTCCATGTATAAACACTGGCTCCTCAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS GCA 72 bp | CGTCCTCTCGCGGAACTCGCTCAGGCCCTCGCAGTCTaGCGAGTCACCCGGGGCCGGGAAGAGCACGTCGCG | + |
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Preference number: 6 (lower is better) Translates to: RPLAELAQALAV*RVTRGREEHVA Trigger: CGCGACGTGCTCTTCCCGGCCCCGGGTGACTCGGCAGACTGCGAGGGCCTGAGCGAGTTCCGCGAGAGGACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000207123.2 |
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| CDS TCA 72 bp | GGAGGCAGGATGAGCTGTCTTGTGGTGGTGAGCCGTTaGGAGCCTCTTCTGAGAGCGCCCACCTGGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GGRMSCLVVVSR*EPLLRAPTWQV Trigger: AACCTGCCAGGTGGGCGCTCTCAGAAGAGGCTCTCAACGGCTCACCACCACAAGACAGCTCATCCTGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS CAA 90 bp | CCAGGATGGGGCAAGGTGGGCGTTTCTACTTTCCGGAGAGAGGCTTaGCCCTGCCGGAGAGAGGCCAGCACTTCATCCATAGAGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PGWGKVGVSTFRREA*PCRREASTSSIEPG Trigger: TCCAGGCTCTATGGATGAAGTGCTGGCCTCTCTCCGGCAGGGCAAAGCCTCTCTCCGGAAAGTAGAAACGCCCACCTTGCCCCATCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS CCA 72 bp | CTGCCGGAGAGAGGCCAGCACTTCATCCATAGAGCCTaGACCCTGGTAGTCACATGGTCTCCCAGCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: LPERGQHFIHRA*TLVVTWSPSRW Trigger: CCATCTGCTGGGAGACCATGTGACTACCAGGGTCCAGGCTCTATGGATGAAGTGCTGGCCTCTCTCCGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS CAA 72 bp | TCTCTGATGCTCCTCTCCAGGTCGCTGGTGCTCTTCTaGCCGGGATCCACACCTTGGCCCGTGTGGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLMLLSRSLVLF*PGSTPWPVWTF Trigger: GAAAGTCCACACGGGCCAAGGTGTGGATCCCGGCAAGAAGAGCACCAGCGACCTGGAGAGGAGCATCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS CAA 72 bp | GGCAAGGTGGGCGTTTCTACTTTCCGGAGAGAGGCTTaGCCCTGCCGGAGAGAGGCCAGCACTTCATCCATA | + |
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Preference number: 6 (lower is better) Translates to: GKVGVSTFRREA*PCRREASTSSI Trigger: TATGGATGAAGTGCTGGCCTCTCTCCGGCAGGGCAAAGCCTCTCTCCGGAAAGTAGAAACGCCCACCTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS CCA 72 bp | TGGCTTCAGGTAAGGGAACAGCACTTCCGGTTTTGCTaGAGGCAGGATGAGCTGTCTTGTGGTGGTGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: WLQVREQHFRFC*RQDELSCGGEP Trigger: CGGCTCACCACCACAAGACAGCTCATCCTGCCTCCAGCAAAACCGGAAGTGCTGTTCCCTTACCTGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS TCA 72 bp | CCACTCAGTGGGGCTCGGCTCATCATTGTCCTCCTCTaGGTCGGCAGAAACTTTCTTGATTCTCTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PLSGARLIIVLL*VGRNFLDSLQG Trigger: GCCCTGGAGAGAATCAAGAAAGTTTCTGCCGACTCAGAGGAGGACAATGATGAGCCGAGCCCCACTGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS TCA 72 bp | CTAGTGGGAGTGGCCGGTCCTCTGTTGCCAAAGTCCTaGGCCCTAAATTCTGATGAGTGGTACCTGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LVGVAGPLLPKS*ALNSDEWYLAG Trigger: ACCTGCCAGGTACCACTCATCAGAATTTAGGGCTCAGGACTTTGGCAACAGAGGACCGGCCACTCCCACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209044.2 |
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| CDS GCA 72 bp | CACTGGCTTCAGGTAAGGGAACAGCACTTCCGGTTTTaGTGGAGGCAGGATGAGCTGTCTTGTGGTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: HWLQVREQHFRF*WRQDELSCGGE Trigger: CTCACCACCACAAGACAGCTCATCCTGCCTCCAGCAAAACCGGAAGTGCTGTTCCCTTACCTGAAGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS CAA 72 bp | CACCTGGCAGGTTTGACACCATGGACTCTGAACAAGTaGTTTTCAGTGCAGACCGATGAGCCGGGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: HLAGLTPWTLNK*FSVQTDEPGTS Trigger: AGAAGTGCCCGGCTCATCGGTCTGCACTGAAAACAACTTGTTCAGAGTCCATGGTGTCAAACCTGCCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS TCA 72 bp | CTAGTGGGAGTGGCCGGTCCTCTGTTGCCAAAGTCCTaGGCCCTAAATTCTGATGAGTGGTACCTTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LVGVAGPLLPKS*ALNSDEWYLEK Trigger: CTTTTCAAGGTACCACTCATCAGAATTTAGGGCTCAGGACTTTGGCAACAGAGGACCGGCCACTCCCACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS CAA 72 bp | TTGAGAGCCTCTTCTGAGAGCGCCCACCTGGCAGGTTaGACACCATGGACTCTGAACAAGTTGTTTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LRASSESAHLAG*TPWTLNKLFSV Trigger: CACTGAAAACAACTTGTTCAGAGTCCATGGTGTCAAACCTGCCAGGTGGGCGCTCTCAGAAGAGGCTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165460.2 |
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| CDS CAA 72 bp | TACCTGGCAGGTTTGACACCATGGACTCTGAACAAGTaGTTTTCAGTGCAGACCGATGAGCCGGGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: YLAGLTPWTLNK*FSVQTDEPGTS Trigger: AGAAGTGCCCGGCTCATCGGTCTGCACTGAAAACAACTTGTTCAGAGTCCATGGTGTCAAACCTGCCAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209044.2 |
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| CDS TCA 72 bp | ATGGACTCTGAACAAGTTGTTTTCAGTGCAGACCGATaGGCCGGGCACTTCTCCTTATATGCTCTTAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: MDSEQVVFSADR*AGHFSLYALSR Trigger: GCGGCTAAGAGCATATAAGGAGAAGTGCCCGGCTCATCGGTCTGCACTGAAAACAACTTGTTCAGAGTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165460.2 ENSMUST00000209044.2 |
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| CDS CCA 72 bp | AATTCTGATGAGTGGTACCTGGCAGGTTTGACACCATaGACTCTGAACAAGTTGTTTTCAGTGCAGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: NSDEWYLAGLTP*TLNKLFSVQTD Trigger: ATCGGTCTGCACTGAAAACAACTTGTTCAGAGTCCATGGTGTCAAACCTGCCAGGTACCACTCATCAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209044.2 |
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