Pregenerated sensors for WFIKKN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044177Ensembl transcript IDs: ENSMUST00000061469.4
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGGGTCAGCAAAGGGGGACGAGACTGCCCGAGGGAACCACCCATaGGAAACAACTTACCTATGCCCTTTCTTCCCCCTGCCAGCCCCC | + |
|
Preference number: 1 (lower is better) Translates to: HGSAKGDETARGNHP*ETTYLCPFFPLPAP Trigger: GGGGGCTGGCAGGGGGAAGAAAGGGCATAGGTAAGTTGTTTCCCATGGGTGGTTCCCTCGGGCAGTCTCGTCCCCCTTTGCTGACCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 90 bp | GACGAGACTGCCCGAGGGAACCACCCATGGGAAACAACTTACCTATaGCCTTTCTTCCCCCTGCCAGCCCCCTTCTCAGCTATCAGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: DETARGNHPWETTYL*PFFPLPAPFSAIRD Trigger: ATCTCTGATAGCTGAGAAGGGGGCTGGCAGGGGGAAGAAAGGGCATAGGTAAGTTGTTTCCCATGGGTGGTTCCCTCGGGCAGTCTCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CCA 90 bp | GGCAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTaGTGCCTAGGCTGCCCCCTGATCCTCCTGCCTTTGTCTTCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: GSIKQCSFSLGPHPL*CLGCPLILLPLSSL Trigger: TAAAGAAGACAAAGGCAGGAGGATCAGGGGGCAGCCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 90 bp | TTTCCTAGGAAGTCCACAGCACATGAAAGCACCTGGCTCATCAGATaGAAATGCCTAGCCGCTGTCAATCACCCACTGGCGCCTGGGGGA | + |
|
Preference number: 1 (lower is better) Translates to: FPRKSTAHESTWLIR*KCLAAVNHPLAPGG Trigger: TCCCCCAGGCGCCAGTGGGTGATTGACAGCGGCTAGGCATTTTCATCTGATGAGCCAGGTGCTTTCATGTGCTGTGGACTTCCTAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CCA 90 bp | ACAGAGAGGTTAAGCAACTTGTCCAAGGTCACAGCGCTGGTAGTATaGGAAGCGATGGGCCACAGACCTCTAAAGGGGGCTAGTGCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: TERLSNLSKVTALVV*EAMGHRPLKGASAH Trigger: GTGAGCACTAGCCCCCTTTAGAGGTCTGTGGCCCATCGCTTCCCATACTACCAGCGCTGTGACCTTGGACAAGTTGCTTAACCTCTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 90 bp | CCTATACAAGCTAAACCATTCTACAATACAGATGGCATCTCCTCCTaGCCCCAGGCTAGGCGACTGGGCAGAGGGGCATGGGTCAGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: PIQAKPFYNTDGISS*PQARRLGRGAWVSK Trigger: TTTGCTGACCCATGCCCCTCTGCCCAGTCGCCTAGCCTGGGGTCAGGAGGAGATGCCATCTGTATTGTAGAATGGTTTAGCTTGTATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 90 bp | ATCCCACAGTGCTTCCTTTGGAGGGATGTCGAAAGAATGAAGGTCTaGGGAGGGAACAGGGCAGATGCAGAGATGACAGAGGGGTTCCAA | + |
|
Preference number: 1 (lower is better) Translates to: IPQCFLWRDVERMKV*GGNRADAEMTEGFQ Trigger: TTGGAACCCCTCTGTCATCTCTGCATCTGCCCTGTTCCCTCCTCAGACCTTCATTCTTTCGACATCCCTCCAAAGGAAGCACTGTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 90 bp | CAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGCTaGCCCCTGATCCTCCTGCCTTTGTCTTCTTTATTTCTCTTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: QCSFSLGPHPLWCLG*PLILLPLSSLFLLL Trigger: TAGCAAGAGAAATAAAGAAGACAAAGGCAGGAGGATCAGGGGGCAGCCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 90 bp | AGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTaGCTAGGCTGCCCCCTGATCCTCCTGCCTTTGTCTTCTTTATTT | + |
|
Preference number: 1 (lower is better) Translates to: SIKQCSFSLGPHPLW*LGCPLILLPLSSLF Trigger: AAATAAAGAAGACAAAGGCAGGAGGATCAGGGGGCAGCCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 90 bp | GAGGGATGTCGAAAGAATGAAGGTCTGAGGAGGGAACAGGGCAGATaGAGAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTT | + |
|
Preference number: 1 (lower is better) Translates to: EGCRKNEGLRREQGR*RDDRGVPNPLHSAF Trigger: AAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTCTGCATCTGCCCTGTTCCCTCCTCAGACCTTCATTCTTTCGACATCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCACTGTCAATCACCCACTaGCGCCTGGGGGAGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GPEETSDLRAAIAKRPLPLSITH*RLGELR Trigger: TCTCAGCTCCCCCAGGCGCCAGTGGGTGATTGACAG...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR TCA 90 bp | ACCCACTGGCGCCTGGGGGAGCTGAGATACAGGACGGCCTTCAGACTCGGCCAGAAGTGTTCACTGAGCTaGAATGTACAGAAGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: THWRLGELRYRTAFRLGQKCSLS*NVQKHT Trigger: TGTGTGCTTCTGTACATTTCAGCTCAGTGAACACTT...CTGGCCGAGTCTGAAGGCCGTCCTGTATCTCAGCTCCCCCAGGCGCCAGTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCAATTCGCTTGGTGTGGTaGCACCAAAGGCAGCCGGCC | + |
|
Preference number: 2 (lower is better) Translates to: EMTEGFQILYTVPLYLGPIRLVW*HQRQPA Trigger: GGCCGGCTGCCTTTGGTGTCACCACACCAAGCGAAT...TGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | GGCACCCAGGAAGTGTTCACTGAGCTGAAATGTACAGAAGCACACAAGCAAACCCCTCAAGTCACCTGGTaGCTGACTGAGGGCAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GTQEVFTELKCTEAHKQTPQVTW*LTEGRG Trigger: ACCCCTGCCCTCAGTCAGCCACCAGGTGACTTGAGG...GGTTTGCTTGTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCACAGAGAAACCTTGTCTaGGGTGGAGGCTGGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: EMTEGFQILYTVPLYLGPQRNLV*GGGWGL Trigger: CAGCCCCCAGCCTCCACCCCAGACAAGGTTTCTCTG...TGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTACACAGTGCCTTTGTATCTGGGACCAGAAGAAACAAGTGATCTCAGAGGGCCCACATCCTCTCTaGTGCCTAGGCTGCCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSTQCLCIWDQKKQVISEGPHPL*CLGCPL Trigger: CAGGGGGCAGCCTAGGCACCAGAGAGGATGTGGGCC...CTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGGAAGCTTTGGCTTCTTaGTGTTCACGACCCTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: QHQAMFILPGPTSSLVPREALAS*CSRPLM Trigger: CATCAAGGGTCGTGAACATCAAGAAGCCAAAGCTTC...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGATCTCTGAGTTCATaGCCAACCTGGTCTACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: WQHQAMFILPGPTSSLVPRSLSS*PTWSTE Trigger: CTCTGTAGACCAGGTTGGCCATGAACTCAGAGATCT...AGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTCCTAGGTTGAAGCTTTaGCTTCTTGATGTTCACGAC | + |
|
Preference number: 2 (lower is better) Translates to: WQHQAMFILPGPTSSLVPPRLKL*LLDVHD Trigger: GTCGTGAACATCAAGAAGCCAAAGCTTCAACCTAGG...AGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCAACCAAAACAGATCTTTaGGCTTTTCCTAGGAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GPEETSDLRAAIAKRPLPTKTDL*AFPRKS Trigger: GGACTTCCTAGGAAAAGCCCAAAGATCTGTTTTGGT...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CAA 90 bp | GATGCAGAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTaGTATCTGGGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: DAEMTEGFQILYTVP*YLGPEETSDLRAAI Trigger: GATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTCTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR TCA 90 bp | GGCACCCAGGAAGTGTTCACTGAGCTGAAATGTACAGAAGCACACAAGCAAACCGGCAGCTGTCTTAAATaGCCCTCGAACTCTCTTATC | + |
|
Preference number: 2 (lower is better) Translates to: GTQEVFTELKCTEAHKQTGSCLK*PSNSLI Trigger: GATAAGAGAGTTCGAGGGTCATTTAAGACAGCTGCC...GGTTTGCTTGTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTACACAGTGCCTTTGTATCTGGGACCAGAAGAAACAAGTGATCTCAGAGGAAGTCCACAGCACATaGAAGCACCTGGCTCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSTQCLCIWDQKKQVISEEVHST*KHLAHQ Trigger: CTGATGAGCCAGGTGCTTTCATGTGCTGTGGACTTC...CTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGTGGGGCGGCACACAGTAGGGCAGCTGTCTTAAATGACCCTCGAACTCTCGATACAGACATTTTATaGAACCCAAAGAACCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CSGAAHSRAAVLNDPRTLDTDIL*NPKNLS Trigger: TGACAGGTTCTTTGGGTTCCATAAAATGTCTGTATC...GAGAGTTCGAGGGTCATTTAAGACAGCTGCCCTACTGTGTGCCGCCCCACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTATACAAGCTAAACCATTCTACAATACAGATGGCATCTCCTCCTGACCCCCTTCCTTTAGCTCACTaGTTTCTTCTAAGCCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLYKLNHSTIQMASPPDPLPLAH*FLLSPG Trigger: CCCTGGGCTTAGAAGAAAGCAGTGAGCTAAAGGAAG...GGGGTCAGGAGGAGATGCCATCTGTATTGTAGAATGGTTTAGCTTGTATAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTTTATTTCTCTTGCTACCAAAACAGATCTTTGGGCTTTTCCTAGGAAGTTCACGACCCTTGATGTaGATGGTCTCTGACTACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLFLLLPKQIFGLFLGSSRPLM*MVSDYS Trigger: GCTGTAGTCAGAGACCATCCACATCAAGGGTCGTGA...ACTTCCTAGGAAAAGCCCAAAGATCTGTTTTGGTAGCAAGAGAAATAAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 72 bp | CAAAGCTGTCTAACCTCAAGTCACCTGGTGGCTGACTaGGGGCAGGGGTGGGTGGGTGGGTGGGTGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSCLTSSHLVAD*GQGWVGGWVEE Trigger: CTCCTCCACCCACCCACCCACCCACCCCTGCCCTCAGTCAGCCACCAGGTGACTTGAGGTTAGACAGCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 72 bp | GGCAGAGGGGCATGGGTCAGCAAAGGGGGACGAGACTaGCCGAGGGAACCACCCATGGGAAACAACTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: GRGAWVSKGGRD*PREPPMGNNLP Trigger: AGGTAAGTTGTTTCCCATGGGTGGTTCCCTCGGGCAGTCTCGTCCCCCTTTGCTGACCCATGCCCCTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 72 bp | GCCCGAGGGAACCACCCATGGGAAACAACTTACCTATaGCCTTTCTTCCCCCTGCCAGCCCCCTTCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ARGNHPWETTYL*PFFPLPAPFSA Trigger: AGCTGAGAAGGGGGCTGGCAGGGGGAAGAAAGGGCATAGGTAAGTTGTTTCCCATGGGTGGTTCCCTCGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 72 bp | CCCCTCCCAGGCCCCACCCAGATAGATCTTTCCTCCTaGTCCCTGAAGGTGCCCATATGCACCACTAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: PLPGPTQIDLSS*SLKVPICTTRW Trigger: CCATCTAGTGGTGCATATGGGCACCTTCAGGGATCAGGAGGAAAGATCTATCTGGGTGGGGCCTGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 72 bp | CAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTaGCTAGGCTGCCCCCTGATCCTCCTGCCTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QCSFSLGPHPLW*LGCPLILLPLS Trigger: AGACAAAGGCAGGAGGATCAGGGGGCAGCCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGCTACACAGAGAAACCTaGTCTGGGGTGGAGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QHQAMFILPGPTSSLVPRLHRET*SGVEAG Trigger: CCCAGCCTCCACCCCAGACAAGGTTTCTCTGTGTAG...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 72 bp | CACAGTGCCTTTGTATCTGGGACCAGAAGAAACAAGTaGTCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HSAFVSGTRRNK*SQSCHRQEAPP Trigger: GGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR GCA 72 bp | TTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGCTaGCCCCTGATCCTCCTGCCTTTGTCTTCTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FSLGPHPLWCLG*PLILLPLSSLF Trigger: AAATAAAGAAGACAAAGGCAGGAGGATCAGGGGGCAGCCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGGAGAGGTTAAGCAACTaGTCCAAGGTCACAGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QHQAMFILPGPTSSLVPRERLSN*SKVTAL Trigger: CAGCGCTGTGACCTTGGACAAGTTGCTTAACCTCTC...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CCA 72 bp | TTAAGCAACTTGTCCAAGGTCACAGCGCTGGTAGTATaGGAAGCGATGGGCCACAGACCTCTAAAGGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSNLSKVTALVV*EAMGHRPLKGA Trigger: AGCCCCCTTTAGAGGTCTGTGGCCCATCGCTTCCCATACTACCAGCGCTGTGACCTTGGACAAGTTGCTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 72 bp | AAGTCCACAGCACATGAAAGCACCTGGCTCATCAGATaGAAATGCCTAGCCGCTGTCAATCACCCACTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KSTAHESTWLIR*KCLAAVNHPLA Trigger: CGCCAGTGGGTGATTGACAGCGGCTAGGCATTTTCATCTGATGAGCCAGGTGCTTTCATGTGCTGTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 72 bp | TGCTTCCTTTGGAGGGATGTCGAAAGAATGAAGGTCTaGGGAGGGAACAGGGCAGATGCAGAGATGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CFLWRDVERMKV*GGNRADAEMTE Trigger: CTCTGTCATCTCTGCATCTGCCCTGTTCCCTCCTCAGACCTTCATTCTTTCGACATCCCTCCAAAGGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGAAGTTAGAGCCTAGGTaGAAGCTTTGGCTTCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QHQAMFILPGPTSSLVPRKLEPR*KLWLLD Trigger: ATCAAGAAGCCAAAGCTTCAACCTAGGCTCTAACTT...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR TCA 72 bp | TATGGTCCTAGCACCTGGCACCCAGGAAGTGTTCACTaGGCTGAAATGTACAGAAGCACACAAGCAAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: YGPSTWHPGSVH*AEMYRSTQANQ Trigger: TTGGTTTGCTTGTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCCAGGTGCTAGGACCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CCA 72 bp | AGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTaGGACCAGAAGAAACAAGTGATCTCAGAGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RGSKSSTQCLCI*DQKKQVISELP Trigger: TGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CCA 72 bp | ATAGAGATGGTGCTAAAACTTCGGAGGCTTTACGGGTaGCTTTCTCCCCACATATTAGCTAATGCTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IEMVLKLRRLYG*LSPHILANASF Trigger: GAAAGAAGCATTAGCTAATATGTGGGGAGAAAGCCACCCGTAAAGCCTCCGAAGTTTTAGCACCATCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CCA 72 bp | GTCTTCTTTATTTCTCTTGCTACCAAAACAGATCTTTaGGCTTTTCCTAGGAAGTCCACAGCACATGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFFISLATKTDL*AFPRKSTAHES Trigger: GCTTTCATGTGCTGTGGACTTCCTAGGAAAAGCCCAAAGATCTGTTTTGGTAGCAAGAGAAATAAAGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | ACCCACTGGCGCCTGGGGGAGCTGAGATACAGGACGGCCTTCAGACTCGGCCAGGTCTCAGCATGGCCATaGCGCCGTCCACCTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: THWRLGELRYRTAFRLGQVSAWP*RRPPPP Trigger: TGGGGGAGGTGGACGGCGGCATGGCCATGCTGAGAC...CTGGCCGAGTCTGAAGGCCGTCCTGTATCTCAGCTCCCCCAGGCGCCAGTGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | ACCCACTGGCGCCTGGGGGAGCTGAGATACAGGACGGCCTTCAGACTCGGCCAGAGGCTTCGGCGTCCATaGAGCAACGGTTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: THWRLGELRYRTAFRLGQRLRRP*SNGCSR Trigger: CCTACTACAACCGTTGCTTCATGGACGCCGAAGCCT...CTGGCCGAGTCTGAAGGCCGTCCTGTATCTCAGCTCCCCCAGGCGCCAGTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCAGAGCAGGGCCGGGGCTaGCATGTCCAGCCCGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPEETSDLRAAIAKRPLPEQGRG*HVQPES Trigger: ACTCTCGGGCTGGACATGGCAGCCCCGGCCCTGCTC...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGCACCAGGGCACGGCCTaGGTCTTGCTCTTCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHQAMFILPGPTSSLVPRHQGTA*VLLFGQ Trigger: CTGACCGAAGAGCAAGACTCAGGCCGTGCCCTGGTG...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | TGGGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCTACATGAAGCAGGGTaGCTTCCAGAGGCTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: WDQKKQVISELPSPRGPSLHEAG*LPEAPG Trigger: GCCGGGAGCCTCTGGAAGTCACCCTGCTTCATGTAG...GGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | TGGGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCACTCTCGCTTGCAGGTaGTCTGGGCATCCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WDQKKQVISELPSPRGPSTLACR*SGHPPR Trigger: TCTGGGTGGATGCCCAGAGCACCTGCAAGCGAGAGT...GGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCAGGTTCCCCGACTTCCTTTAGCTCACTGCTTTCTTCTAAGCCCAGGGGCTTTGCAAGGCCCTTaGAGGGCAGGCAGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCQVPRLPLAHCFLLSPGALQGP*RAGRLQ Trigger: CTGCAGCCTGCCTGCCCTGCAAGGGCCTTGCAAAGC...CCCTGGGCTTAGAAGAAAGCAGTGAGCTAAAGGAAGTCGGGGAACCTGACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCACTGGTAACAAGTTTTTaGCGGGGCTTGCAGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPEETSDLRAAIAKRPLPLVTSF*RGLQAR Trigger: CCGGGCCTGCAAGCCCCGGCAAAAACTTGTTACCAG...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | AGGCAGAGAGAACATAGAGATGGTGCTAAAACTTCGGAGGCTTTACGGGTGGCTGATGGACAGGATGGTTaGGCAGGGCCGGGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQREHRDGAKTSEALRVADGQDG*AGPGLP Trigger: TGGCAGCCCCGGCCCTGCTCAACCATCCTGTCCATC...AGCCACCCGTAAAGCCTCCGAAGTTTTAGCACCATCTCTATGTTCTCTCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGGGGCGGCACACAGTAGGGCAGCTGTCTTAAATGACCCTCGAACTCTCATTGAGACTGCTCTCTaGAGTGGCCCTGGCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSGAAHSRAAVLNDPRTLIETAL*SGPGLT Trigger: GGTCAGGCCAGGGCCACTTCAGAGAGCAGTCTCAAT...GAGAGTTCGAGGGTCATTTAAGACAGCTGCCCTACTGTGTGCCGCCCCACTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTTGTCGTTGGGGCAGATaGCCGCATGGGAGTATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WQHQAMFILPGPTSSLVPCRWGR*PHGSIG Trigger: TCCGATACTCCCATGCGGGCATCTGCCCCAACGACA...AGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCAGGTTCCCCGACTTCCTTTAGCTCACTGCTTTCTTCTAAGCCCAGGGTGGGGTTCATGTCGTTaGGGCAGATGCCCGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCQVPRLPLAHCFLLSPGWGSCR*GRCPHG Trigger: CCCATGCGGGCATCTGCCCCAACGACATGAACCCCA...CCCTGGGCTTAGAAGAAAGCAGTGAGCTAAAGGAAGTCGGGGAACCTGACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | TGTAGTGGGGCGGCACACAGTAGGGCAGCTGTCTTAAATGACCCTCGAACTCTCCATCCACCCAGAGGTTaGGGTTCATGTCGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSGAAHSRAAVLNDPRTLHPPRG*GSCRWG Trigger: GCCCCAACGACATGAACCCCAACCTCTGGGTGGATG...GAGAGTTCGAGGGTCATTTAAGACAGCTGCCCTACTGTGTGCCGCCCCACTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTCTCACCCACGGTGACTaGCTGATGGACAGGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WQHQAMFILPGPTSSLVPLTHGD*LMDRMV Trigger: AACCATCCTGTCCATCAGTCAGTCACCGTGGGTGAG...AGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | CTCCTATACAAGCTAAACCATTCTACAATACAGATGGCATCTCCTCCTGACCCCGAAGTGGCCCTGGCCTaGCCACCCCTGACCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLYKLNHSTIQMASPPDPEVALA*PPLTTD Trigger: GTCGGTGGTCAGGGGTGGTCAGGCCAGGGCCACTTC...GGGGTCAGGAGGAGATGCCATCTGTATTGTAGAATGGTTTAGCTTGTATAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGGTGGGACATAAGCTTTaGAAGGCCCTTGCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHQAMFILPGPTSSLVPRVGHKL*KALAGQ Trigger: CTGCCCTGCAAGGGCCTTGCAAAGCTTATGTCCCAC...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | GAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCATTGCAGGCCCGGCAGTaGTGGTTACCCCTCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMTEGFQILYTVPLYLGPLQARQ*WLPLGK Trigger: CTTCCCGAGGGGTAACCAGCACTGCCGGGCCTGCAA...TGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | GAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCAGGGCAGATGCCCGCATaGGAGTATCGGATGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EMTEGFQILYTVPLYLGPGQMPA*EYRMGG Trigger: GCCACCCATCCGATACTCCCATGCGGGCATCTGCCC...TGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | TACGGGTGGCTTTCTCCCCACATATTAGCTAATGCTTCTTTCCTAGCCAAAGCTGCTGTTTCTCCCAAGTaGGCTCTGGCCGAGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGWLSPHILANASFLAKAAVSPK*ALAEAG Trigger: GCCGGCCTCGGCCAGAGCTCACTTGGGAGAAACAGC...AGCTTTGGCTAGGAAAGAAGCATTAGCTAATATGTGGGGAGAAAGCCACCCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCAAGGTCTCAAAGTGGTTaGGATTGTGGTGGCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPEETSDLRAAIAKRPLPRSQSG*DCGGSD Trigger: GTCACTGCCACCACAATCTCAACCACTTTGAGACCT...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGTTTCACACTCTCGCTTaGAGGTGCTCTGGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHQAMFILPGPTSSLVPRFHTLA*RCSGHP Trigger: TGGATGCCCAGAGCACCTGCAAGCGAGAGTGTGAAA...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | CAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTAGGCACTCAGAGCCCTGCTaGAGGCACATGAAATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QHQAMFILPGPTSSLVPRHSEPC*RHMKWS Trigger: TGACCATTTCATGTGCCTGCAGCAGGGCTCTGAGTG...CCTAGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTTCACACTCAGAGCCCTaGTGCAGGCACATGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: WQHQAMFILPGPTSSLVPSHSEP*CRHMKW Trigger: CCATTTCATGTGCCTGCAGCAGGGCTCTGAGTGTGA...AGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | TGTAGTGGGGCGGCACACAGTAGGGCAGCTGTCTTAAATGACCCTCGAACTCTCTCTCACAGCGATCTTTaGACTTACACACGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSGAAHSRAAVLNDPRTLSHSDL*TYTRAG Trigger: GCCAGCCCGTGTGTAAGTGCAAAGATCGCTGTGAGA...GAGAGTTCGAGGGTCATTTAAGACAGCTGCCCTACTGTGTGCCGCCCCACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCATCAAGCAATGTTCATTCTCCCTGGGCCCACATCCTCTCTGGTGCCTGAAAAGCTGTGCCATTaGGACTGCTCTCTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQHQAMFILPGPTSSLVPEKLCH*DCSLKW Trigger: CCACTTCAGAGAGCAGTCTCAATGGCACAGCTTTTC...AGGCACCAGAGAGGATGTGGGCCCAGGGAGAATGAACATTGCTTGATGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | GAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCAATCCATGTAGCGGGCTaGCACACAGCTCTTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EMTEGFQILYTVPLYLGPIHVAG*HTALGP Trigger: GGGACCAAGAGCTGTGTGGCAGCCCGCTACATGGAT...TGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | GGCACCCAGGAAGTGTTCACTGAGCTGAAATGTACAGAAGCACACAAGCAAACCAGGCAGTTGTTAGCCTaGGCGTCGAAGTGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEVFTELKCTEAHKQTRQLLA*ASKCQR Trigger: ACGCTGGCACTTCGACGCCCAGGCTAACAACTGCCT...GGTTTGCTTGTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCAGAAGAAACTATCGGGTCTCAGCATaGCCATGCCGCCGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RGVPNPLHSAFVSGTRRNYRVSA*PCRRPP Trigger: AGGTGGACGGCGGCATGGCCATGCTGAGACCCGATA...GTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | CTAGCACCTGGCACCCAGGAAGTGTTCACTGAGCTGAAATGTACAGAAGCACACTGGTCCCACACACATTaGGGCAGCATTTCTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPGTQEVFTELKCTEAHWSHTH*GSISHR Trigger: CCTATGAGAAATGCTGCCCCAATGTGTGTGGGACCA...GTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCCAGGTGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCAGAAGAAACACAGTCCTCACTGTCTaGGGGCTTCAGGCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVPNPLHSAFVSGTRRNTVLTV*GLQALC Trigger: ACAGAGTGCCTGAAGCCCCCAGACAGTGAGGACTGT...GTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | TACGGGTGGCTTTCTCCCCACATATTAGCTAATGCTTCTTTCCTAGCCAAAGCTCAGGCAGGCTGCAGATaGCCAATGGCCCACTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: YGWLSPHILANASFLAKAQAGCR*PMAHSY Trigger: GTATGAGTGGGCCATTGGCCATCTGCAGCCTGCCTG...AGCTTTGGCTAGGAAAGAAGCATTAGCTAATATGTGGGGAGAAAGCCACCCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | GGCACCCAGGAAGTGTTCACTGAGCTGAAATGTACAGAAGCACACAAGCAAACCAGATTGTGGTGGCAGTaGCCAAAGGTGAAAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTQEVFTELKCTEAHKQTRLWWQ*PKVKVR Trigger: CCTCACTTTCACCTTTGGTCACTGCCACCACAATCT...GGTTTGCTTGTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR GCA 90 bp | TCCTCTACACAGTGCCTTTGTATCTGGGACCAGAAGAAACAAGTGATCTCAGAGAAGTGCCAGCGTGTCTaGTCCTCTCCACAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTQCLCIWDQKKQVISEKCQRV*SSPQSS Trigger: TGAGGACTGTGGAGAGGAGCAGACACGCTGGCACTT...CTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR TCA 90 bp | TACGGGTGGCTTTCTCCCCACATATTAGCTAATGCTTCTTTCCTAGCCAAAGCTAGCCCAGGAAGTCCTTaGGGACGTCACAGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGWLSPHILANASFLAKASPGSP*GRHRFS Trigger: AGAAAACCTGTGACGTCCTCAAGGACTTCCTGGGCT...AGCTTTGGCTAGGAAAGAAGCATTAGCTAATATGTGGGGAGAAAGCCACCCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTATACAAGCTAAACCATTCTACAATACAGATGGCATCTCCTCCTGACCCCTGCAGGCACATGAAATaGTCACATGTGGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLYKLNHSTIQMASPPDPCRHMK*SHVASL Trigger: CAAGGAGGCCACATGTGACCATTTCATGTGCCTGCA...GGGGTCAGGAGGAGATGCCATCTGTATTGTAGAATGGTTTAGCTTGTATAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | TCCTCTACACAGTGCCTTTGTATCTGGGACCAGAAGAAACAAGTGATCTCAGAGCAGGCACTCTGTTGCTaGAAAAGCTGTGCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTQCLCIWDQKKQVISEQALCC*KSCAIE Trigger: CTCAATGGCACAGCTTTTCCAGCAACAGAGTGCCTG...CTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTTATTTCTCTTGCTACCAAAACAGATCTTTGGGCTTTTCCTAGGAAGTCGCTTGCAGGTGCTCTaGGCATCCACCCAGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLFLLLPKQIFGLFLGSRLQVL*ASTQRL Trigger: CAACCTCTGGGTGGATGCCCAGAGCACCTGCAAGCG...ACTTCCTAGGAAAAGCCCAAAGATCTGTTTTGGTAGCAAGAGAAATAAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CAA 72 bp | ATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTaGTATCTGGGACCAGAAGAAACAAGTGATCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MTEGFQILYTVP*YLGPEETSDLR Trigger: TCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| 3UTR CAA 72 bp | ACTATGAAATTTTATTTATTATCGTCCTCCGTATATTaGAGGAAGCCATTAGGGCATCCCACAGTGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TMKFYLLSSSVY*RKPLGHPTVLP Trigger: AGGAAGCACTGTGGGATGCCCTAATGGCTTCCTCAAATATACGGAGGACGATAATAAATAAAATTTCATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | CTTGTACATGACCTCACGGAGCTTCCTGACCCGCCGTGTGCTCGATaGCCCCACAAAGCTATCGGGTCTCAGCATGGCCATGCCGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVHDLTELPDPPCAR*PHKAIGSQHGHAAV Trigger: GACGGCGGCATGGCCATGCTGAGACCCGATAGCTTTGTGGGGGCATCGAGCACACGGCGGGTCAGGAAGCTCCGTGAGGTCATGTACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | TCTGGGCATCCACCCAGAGGTTGGGGTTCATGTCGTTGGGGCAGATaGCCGCATGGGAGTATCGGATGGGTGGCAGTGCTAGGCCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGHPPRGWGSCRWGR*PHGSIGWVAVLGLE Trigger: TTCGAGGCCTAGCACTGCCACCCATCCGATACTCCCATGCGGGCATCTGCCCCAACGACATGAACCCCAACCTCTGGGTGGATGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 90 bp | TCTCAGCATGGCCATGCCGCCGTCCACCTCCCCCATGATGATGAGTaGTGTCTCACCCACTGTCACGTTGGGGCAAGGACAGGTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQHGHAAVHLPHDDE*CLTHCHVGARTGPV Trigger: GACTGGACCTGTCCTTGCCCCAACGTGACAGTGGGTGAGACACCACTCATCATCATGGGGGAGGTGGACGGCGGCATGGCCATGCTGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS TCA 90 bp | GGAAAAGCTGTGCCATTGAGACTGCTCTCTGAAGTGGCCCTGGCCTaGCCACCCCTGACCACCGACAACGGGAAGTCAGCCCTCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GKAVPLRLLSEVALA*PPLTTDNGKSALRT Trigger: TGTCCTGAGGGCTGACTTCCCGTTGTCGGTGGTCAGGGGTGGTCAGGCCAGGGCCACTTCAGAGAGCAGTCTCAATGGCACAGCTTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS TCA 90 bp | CAGGCACTCTGTTGCTGGAAAAGCTGTGCCATTGAGACTGCTCTCTaGAGTGGCCCTGGCCTGACCACCCCTGACCACCGACAACGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QALCCWKSCAIETAL*SGPGLTTPDHRQRE Trigger: TTCCCGTTGTCGGTGGTCAGGGGTGGTCAGGCCAGGGCCACTTCAGAGAGCAGTCTCAATGGCACAGCTTTTCCAGCAACAGAGTGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS TCA 90 bp | GTCTCACCCACTGTCACGTTGGGGCAAGGACAGGTCCAGTCTACATaGAGCAGGGTGACTTCCAGAGGCTCCCGGCCCAGAAACTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSPTVTLGQGQVQST*SRVTSRGSRPRNLR Trigger: CCTCAAGTTTCTGGGCCGGGAGCCTCTGGAAGTCACCCTGCTTCATGTAGACTGGACCTGTCCTTGCCCCAACGTGACAGTGGGTGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | AAAGTGAGGCAGTTGTTAGCCTGGGCGTCGAAGTGCCAGCGTGTCTaGTCCTCTCCACAGTCCTCACTGTCTGGGGGCTTCAGGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KVRQLLAWASKCQRV*SSPQSSLSGGFRHS Trigger: AGAGTGCCTGAAGCCCCCAGACAGTGAGGACTGTGGAGAGGAGCAGACACGCTGGCACTTCGACGCCCAGGCTAACAACTGCCTCACTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | AGCGTGGGACATAAGCTTTGCAAGGCCCTTGCAGGGCAGGCAGGCTaGAGATGGCCAATGGCCCACTCATACAAGCCAGCATACAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVGHKLCKALAGQAG*RWPMAHSYKPAYRP Trigger: AGGCCTGTATGCTGGCTTGTATGAGTGGGCCATTGGCCATCTGCAGCCTGCCTGCCCTGCAAGGGCCTTGCAAAGCTTATGTCCCACGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCATTGGGGTTCATGTCGTaGGGGCAGATGCCCGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GPEETSDLRAAIAKRPLPLGFMS*GQMPAW Trigger: CCATGCGGGCATCTGCCCCAACGACATGAACCCCAA...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCAGCATCCACCCAGAGGTaGGGGTTCATGTCGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPEETSDLRAAIAKRPLPASTQR*GFMSLG Trigger: CCCCAACGACATGAACCCCAACCTCTGGGTGGATGC...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | CATGCCCACAGGGCCCTTCTTCCCTTTCACATCCATGTAGCGGGCTaGCACACAGCTCTTGGTCCCACACACATTGGGGCAGCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HAHRALLPFHIHVAG*HTALGPTHIGAAFL Trigger: GAGAAATGCTGCCCCAATGTGTGTGGGACCAAGAGCTGTGTGGCAGCCCGCTACATGGATGTGAAAGGGAAGAAGGGCCCTGTGGGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 90 bp | GTCGAAGTGCCAGCGTGTCTGCTCCTCTCCACAGTCCTCACTGTCTaGGGGCTTCAGGCACTCTGTTGCTGGAAAAGCTGTGCCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VEVPACLLLSTVLTV*GLQALCCWKSCAIE Trigger: CTCAATGGCACAGCTTTTCCAGCAACAGAGTGCCTGAAGCCCCCAGACAGTGAGGACTGTGGAGAGGAGCAGACACGCTGGCACTTCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | CATAGGTCTCACATTCCTGGTCTGTTTCACACTCTCGCTTGCAGGTaGTCTGGGCATCCACCCAGAGGTTGGGGTTCATGTCGTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HRSHIPGLFHTLACR*SGHPPRGWGSCRWG Trigger: GCCCCAACGACATGAACCCCAACCTCTGGGTGGATGCCCAGAGCACCTGCAAGCGAGAGTGTGAAACAGACCAGGAATGTGAGACCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 90 bp | GTCTCACATTCCTGGTCTGTTTCACACTCTCGCTTGCAGGTGCTCTaGGCATCCACCCAGAGGTTGGGGTTCATGTCGTTGGGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSHSWSVSHSRLQVL*ASTQRLGFMSLGQM Trigger: CATCTGCCCCAACGACATGAACCCCAACCTCTGGGTGGATGCCCAGAGCACCTGCAAGCGAGAGTGTGAAACAGACCAGGAATGTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | GACACGACTCCTCACAAGCCTCACGGCTTTCAAAGTTGTTACCGTTaGCCTCACAGCCGCCATAGACGAAGGACTGGCATAGGCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DTTPHKPHGFQSCYR*PHSRHRRRTGIGLS Trigger: AGACAGGCCTATGCCAGTCCTTCGTCTATGGCGGCTGTGAGGGCAACGGTAACAACTTTGAAAGCCGTGAGGCTTGTGAGGAGTCGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 90 bp | TCTTTTAAGACCTCATCCACGGTCACCAGGGCACGGCCTGAGTCTTaGTCTTCGGTCAGCTCAGAGACCCTGCCCAGGATGACAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFKTSSTVTRARPES*SSVSSETLPRMTKS Trigger: TGACTTTGTCATCCTGGGCAGGGTCTCTGAGCTGACCGAAGAGCAAGACTCAGGCCGTGCCCTGGTGACCGTGGATGAGGTCTTAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 90 bp | ATGACCAGCTGGGCAATGTTAGTGACCACCACATTACCGCGCACGTaGTTGGGCCTCATGACAACATTCTCTCGGTCCTCCAGCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MTSWAMLVTTTLPRT*LGLMTTFSRSSSCF Trigger: GAAACAGCTGGAGGACCGAGAGAATGTTGTCATGAGGCCCAACCACGTGCGCGGTAATGTGGTGGTCACTAACATTGCCCAGCTGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | GAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCAGCTGCCACACAGCTCTaGGTCCCACACACATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EMTEGFQILYTVPLYLGPAATQL*VPHTLG Trigger: CCCCAATGTGTGTGGGACCAAGAGCTGTGTGGCAGC...TGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | TACGGGTGGCTTTCTCCCCACATATTAGCTAATGCTTCTTTCCTAGCCAAAGCTTCACATGTGGCCTCCTaGGGCATGCCCACAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YGWLSPHILANASFLAKASHVAS*GMPTGP Trigger: GGGCCCTGTGGGCATGCCCAAGGAGGCCACATGTGA...AGCTTTGGCTAGGAAAGAAGCATTAGCTAATATGTGGGGAGAAAGCCACCCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAGGAAGTGTTCACTGAGCTGAAATGTACAGAAGCACACAAGCAAACCGCTGGTAACAAGTTTTaGCCGGGGCTTGCAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTQEVFTELKCTEAHKQTAGNKF*PGLAGP Trigger: CGGGCCTGCAAGCCCCGGCAAAAACTTGTTACCAGC...GGTTTGCTTGTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | GGACCAGAAGAAACAAGTGATCTCAGAGCTGCCATCGCCAAGAGGCCCCTCCCAACGTCACAGGTTTTCTaGTACATGACCTCACGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPEETSDLRAAIAKRPLPTSQVF*YMTSRS Trigger: GCTCCGTGAGGTCATGTACAAGAAAACCTGTGACGT...TGGGAGGGGCCTCTTGGCGATGGCAGCTCTGAGATCACTTGTTTCTTCTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | TCCTCTACACAGTGCCTTTGTATCTGGGACCAGAAGAAACAAGTGATCTCAGAGGACAGTGTGATGCCCTaGGAGCAGGCTTCGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSTQCLCIWDQKKQVISEDSVMP*EQASAS Trigger: GGACGCCGAAGCCTGCTCCAAGGGCATCACACTGTC...CTCTGAGATCACTTGTTTCTTCTGGTCCCAGATACAAAGGCACTGTGTAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 90 bp | CCTTCTTCCCTTTCACATCCATGTAGCGGGCTGCCACACAGCTCTTaGTCCCACACACATTGGGGCAGCATTTCTCATAGGTCTCACATT | + |
|
Preference number: 5 (lower is better) Translates to: PSSLSHPCSGLPHSS*SHTHWGSISHRSHI Trigger: AATGTGAGACCTATGAGAAATGCTGCCCCAATGTGTGTGGGACCAAGAGCTGTGTGGCAGCCCGCTACATGGATGTGAAAGGGAAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | CTAGCACCTGGCACCCAGGAAGTGTTCACTGAGCTGAAATGTACAGAAGCACACTTCTCACAGCGATCTTaGCACTTACACACGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAPGTQEVFTELKCTEAHFSQRS*HLHTGW Trigger: CCAGCCCGTGTGTAAGTGCAAAGATCGCTGTGAGAA...GTGTGCTTCTGTACATTTCAGCTCAGTGAACACTTCCTGGGTGCCAGGTGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | GAGATGACAGAGGGGTTCCAAATCCTCTACACAGTGCCTTTGTATCTGGGACCAGGAAAAGCTGTGCCATaGAGACTGCTCTCTGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EMTEGFQILYTVPLYLGPGKAVP*RLLSEV Trigger: CACTTCAGAGAGCAGTCTCAATGGCACAGCTTTTCC...TGGTCCCAGATACAAAGGCACTGTGTAGAGGATTTGGAACCCCTCTGTCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | CTCCTATACAAGCTAAACCATTCTACAATACAGATGGCATCTCCTCCTGACCCCTCCCGGCCCAGAAACTaGAGGCCCATCTTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLYKLNHSTIQMASPPDPSRPRN*RPIFSS Trigger: AGATGAGAAGATGGGCCTCAAGTTTCTGGGCCGGGA...GGGGTCAGGAGGAGATGCCATCTGTATTGTAGAATGGTTTAGCTTGTATAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | TACGGGTGGCTTTCTCCCCACATATTAGCTAATGCTTCTTTCCTAGCCAAAGCTGCTTCAGGCACTCTGTaGCTGGAAAAGCTGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YGWLSPHILANASFLAKAASGTL*LEKLCH Trigger: ATGGCACAGCTTTTCCAGCAACAGAGTGCCTGAAGC...AGCTTTGGCTAGGAAAGAAGCATTAGCTAATATGTGGGGAGAAAGCCACCCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS-3UTR CAA 90 bp | TCTTCTTTATTTCTCTTGCTACCAAAACAGATCTTTGGGCTTTTCCTAGGAAGTAAGCCCAGGAAGTCCTaGAGGACGTCACAGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFLLLPKQIFGLFLGSKPRKS*RTSQVF Trigger: GAAAACCTGTGACGTCCTCAAGGACTTCCTGGGCTT...ACTTCCTAGGAAAAGCCCAAAGATCTGTTTTGGTAGCAAGAGAAATAAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | TCCAGCCCGAGAGTCTCCGGAGAGGCGGTGGTGGGATaGACCGTGGTCTCAGGCGGTGGAGGGCTGGTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSPRVSGEAVVG*TVVSGGGGLVL Trigger: TAACACCAGCCCTCCACCGCCTGAGACCACGGTGCATCCCACCACCGCCTCTCCGGAGACTCTCGGGCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | TGTCGTTGGGGCAGATGCCCGCATGGGAGTATCGGATaGGTGGCAGTGCTAGGCCTCGAAGGGGAGCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: CRWGRCPHGSIG*VAVLGLEGEPR Trigger: TCGAGGCTCCCCTTCGAGGCCTAGCACTGCCACCCATCCGATACTCCCATGCGGGCATCTGCCCCAACGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | ACCTCATCCACGGTCACCAGGGCACGGCCTGAGTCTTaGTCTTCGGTCAGCTCAGAGACCCTGCCCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TSSTVTRARPES*SSVSSETLPRM Trigger: CATCCTGGGCAGGGTCTCTGAGCTGACCGAAGAGCAAGACTCAGGCCGTGCCCTGGTGACCGTGGATGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | GACCTCACGGAGCTTCCTGACCCGCCGTGTGCTCGATaGCCCCACAAAGCTATCGGGTCTCAGCATGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DLTELPDPPCAR*PHKAIGSQHGH Trigger: ATGGCCATGCTGAGACCCGATAGCTTTGTGGGGGCATCGAGCACACGGCGGGTCAGGAAGCTCCGTGAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | GGCCATGCCGCCGTCCACCTCCCCCATGATGATGAGTaGTGTCTCACCCACTGTCACGTTGGGGCAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GHAAVHLPHDDE*CLTHCHVGART Trigger: TGTCCTTGCCCCAACGTGACAGTGGGTGAGACACCACTCATCATCATGGGGGAGGTGGACGGCGGCATGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | CCACCCAGAGGTTGGGGTTCATGTCGTTGGGGCAGATaGCCGCATGGGAGTATCGGATGGGTGGCAGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PPRGWGSCRWGR*PHGSIGWVAVL Trigger: TAGCACTGCCACCCATCCGATACTCCCATGCGGGCATCTGCCCCAACGACATGAACCCCAACCTCTGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | TCTGGCTGTTGTAGGCCCAGCGTGGGACATAAGCTTTaGAAGGCCCTTGCAGGGCAGGCAGGCTGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SGCCRPSVGHKL*KALAGQAGCRW Trigger: CCATCTGCAGCCTGCCTGCCCTGCAAGGGCCTTGCAAAGCTTATGTCCCACGCTGGGCCTACAACAGCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | AGGTTGGGGTTCATGTCGTTGGGGCAGATGCCCGCATaGGAGTATCGGATGGGTGGCAGTGCTAGGCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RLGFMSLGQMPA*EYRMGGSARPR Trigger: TCGAGGCCTAGCACTGCCACCCATCCGATACTCCCATGCGGGCATCTGCCCCAACGACATGAACCCCAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS TCA 72 bp | CAACATTCTCTCGGTCCTCCAGCTGTTTCTCCCAAGTaGGCTCTGGCCGAGGCCGGCCTACCACGTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: QHSLGPPAVSPK*ALAEAGLPRHR Trigger: TCTGTGACGTGGTAGGCCGGCCTCGGCCAGAGCTCACTTGGGAGAAACAGCTGGAGGACCGAGAGAATGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS TCA 72 bp | ACTGTCACGTTGGGGCAAGGACAGGTCCAGTCTACATaGAGCAGGGTGACTTCCAGAGGCTCCCGGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TVTLGQGQVQST*SRVTSRGSRPR Trigger: TCTGGGCCGGGAGCCTCTGGAAGTCACCCTGCTTCATGTAGACTGGACCTGTCCTTGCCCCAACGTGACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | AGGGCCCTTCTTCCCTTTCACATCCATGTAGCGGGCTaGCACACAGCTCTTGGTCCCACACACATTGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RALLPFHIHVAG*HTALGPTHIGA Trigger: TGCCCCAATGTGTGTGGGACCAAGAGCTGTGTGGCAGCCCGCTACATGGATGTGAAAGGGAAGAAGGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | GTGAAAGTGAGGCAGTTGTTAGCCTGGGCGTCGAAGTaGCAGCGTGTCTGCTCCTCTCCACAGTCCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VKVRQLLAWASK*QRVCSSPQSSL Trigger: CAGTGAGGACTGTGGAGAGGAGCAGACACGCTGGCACTTCGACGCCCAGGCTAACAACTGCCTCACTTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | ATGTCACACTCAGAGCCCTGCTGCAGGCACATGAAATaGTCACATGTGGCCTCCTTGGGCATGCCCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MSHSEPCCRHMK*SHVASLGMPTG Trigger: CCCTGTGGGCATGCCCAAGGAGGCCACATGTGACCATTTCATGTGCCTGCAGCAGGGCTCTGAGTGTGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | CCAGCGTGTCTGCTCCTCTCCACAGTCCTCACTGTCTaGGGGCTTCAGGCACTCTGTTGCTGGAAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PACLLLSTVLTV*GLQALCCWKSC Trigger: ACAGCTTTTCCAGCAACAGAGTGCCTGAAGCCCCCAGACAGTGAGGACTGTGGAGAGGAGCAGACACGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS TCA 72 bp | GCTTCAGGCACTCTGTTGCTGGAAAAGCTGTGCCATTaGGACTGCTCTCTGAAGTGGCCCTGGCCTGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: ASGTLLLEKLCH*DCSLKWPWPDH Trigger: GTGGTCAGGCCAGGGCCACTTCAGAGAGCAGTCTCAATGGCACAGCTTTTCCAGCAACAGAGTGCCTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | ACAAAGTCACTCCGACAGAAGCTGGTAACAAGTTTTTaGCGGGGCTTGCAGGCCCGGCAGTGCTGGTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: TKSLRQKLVTSF*RGLQARQCWLP Trigger: GGGTAACCAGCACTGCCGGGCCTGCAAGCCCCGGCAAAAACTTGTTACCAGCTTCTGTCGGAGTGACTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | TCCTGGTCTGTTTCACACTCTCGCTTGCAGGTGCTCTaGGCATCCACCCAGAGGTTGGGGTTCATGTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWSVSHSRLQVL*ASTQRLGFMSL Trigger: CAACGACATGAACCCCAACCTCTGGGTGGATGCCCAGAGCACCTGCAAGCGAGAGTGTGAAACAGACCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CAA 72 bp | TGCTGCAGGCACATGAAATGGTCACATGTGGCCTCCTaGGGCATGCCCACAGGGCCCTTCTTCCCTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: CCRHMKWSHVAS*GMPTGPFFPFT Trigger: TGTGAAAGGGAAGAAGGGCCCTGTGGGCATGCCCAAGGAGGCCACATGTGACCATTTCATGTGCCTGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CAA 72 bp | GACAAAGTCACTCCGACAGAAGCTGGTAACAAGTTTTaGCCGGGGCTTGCAGGCCCGGCAGTGCTGGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: DKVTPTEAGNKF*PGLAGPAVLVT Trigger: GGTAACCAGCACTGCCGGGCCTGCAAGCCCCGGCAAAAACTTGTTACCAGCTTCTGTCGGAGTGACTTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CAA 90 bp | ACCAGCTGGGCAATGTTAGTGACCACCACATTACCGCGCACGTGGTaGGGCCTCATGACAACATTCTCTCGGTCCTCCAGCTGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSWAMLVTTTLPRTW*GLMTTFSRSSSCFS Trigger: GGAGAAACAGCTGGAGGACCGAGAGAATGTTGTCATGAGGCCCAACCACGTGCGCGGTAATGTGGTGGTCACTAACATTGCCCAGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | CACATTCCTGGTCTGTTTCACACTCTCGCTTGCAGGTaGTCTGGGCATCCACCCAGAGGTTGGGGTTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: HIPGLFHTLACR*SGHPPRGWGSC Trigger: ACATGAACCCCAACCTCTGGGTGGATGCCCAGAGCACCTGCAAGCGAGAGTGTGAAACAGACCAGGAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | TGGGCAATGTTAGTGACCACCACATTACCGCGCACGTaGTTGGGCCTCATGACAACATTCTCTCGGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WAMLVTTTLPRT*LGLMTTFSRSS Trigger: GGAGGACCGAGAGAATGTTGTCATGAGGCCCAACCACGTGCGCGGTAATGTGGTGGTCACTAACATTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CAA 72 bp | GCAATGTTAGTGACCACCACATTACCGCGCACGTGGTaGGGCCTCATGACAACATTCTCTCGGTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AMLVTTTLPRTW*GLMTTFSRSSS Trigger: GCTGGAGGACCGAGAGAATGTTGTCATGAGGCCCAACCACGTGCGCGGTAATGTGGTGGTCACTAACATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS GCA 72 bp | CCTCACAAGCCTCACGGCTTTCAAAGTTGTTACCGTTaGCCTCACAGCCGCCATAGACGAAGGACTGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: PHKPHGFQSCYR*PHSRHRRRTGI Trigger: TATGCCAGTCCTTCGTCTATGGCGGCTGTGAGGGCAACGGTAACAACTTTGAAAGCCGTGAGGCTTGTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||
| CDS CCA 72 bp | CTTTCACATCCATGTAGCGGGCTGCCACACAGCTCTTaGTCCCACACACATTGGGGCAGCATTTCTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSHPCSGLPHSS*SHTHWGSISHR Trigger: CCTATGAGAAATGCTGCCCCAATGTGTGTGGGACCAAGAGCTGTGTGGCAGCCCGCTACATGGATGTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061469.4 |
||