Pregenerated sensors for WFIKKN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071192Ensembl transcript IDs: ENSMUST00000095487.7, ENSMUST00000176696.3
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCGAGCAGTGGTCTCGGGTGGTCCCGGGCTGCTGGGCGGCCAACTaGGAATGTGCTTACAGGGTACAACGTGCAGGTGGAGACCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: GEQWSRVVPGCWAAN*ECAYRVQRAGGDPA Trigger: TGCGGGGTCTCCACCTGCACGTTGTACCCTGTAAGCACATTCTCAGTTGGCCGCCCAGCAGCCCGGGACCACCCGAGACCACTGCTCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 90 bp | GTGGTCTCGGGTGGTCCCGGGCTGCTGGGCGGCCAACTGAGAATGTaGTTACAGGGTACAACGTGCAGGTGGAGACCCCGCAGGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: VVSGGPGLLGGQLRM*LQGTTCRWRPRRQA Trigger: AGCCTGCCTGCGGGGTCTCCACCTGCACGTTGTACCCTGTAAGCACATTCTCAGTTGGCCGCCCAGCAGCCCGGGACCACCCGAGACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 90 bp | TCGACCCACAGGTGGGGGCTGAGCTCGTTGGGGCACATGCCAGGATaGCTTCCGGGATCTGGCAGCAGGTTGGTCTCCGAGGTCAGATGG | + |
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Preference number: 5 (lower is better) Translates to: STHRWGLSSLGHMPG*LPGSGSRLVSEVRW Trigger: CCATCTGACCTCGGAGACCAACCTGCTGCCAGATCCCGGAAGCCATCCTGGCATGTGCCCCAACGAGCTCAGCCCCCACCTGTGGGTCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS TCA 90 bp | TCGGCCTGGCACTCAGCCAAGGCTGGGATACCTGGGTCCCTGTCCTaGGTAGTTGCCCGCTGTAAAACGGAAAGGGGAAAGTCGGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: SAWHSAKAGIPGSLS*VVARCKTERGKSAR Trigger: GCGGGCCGACTTTCCCCTTTCCGTTTTACAGCGGGCAACTACTCAGGACAGGGACCCAGGTATCCCAGCCTTGGCTGAGTGCCAGGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 90 bp | CGATGGCAAAGTCACTGCGGCACAAGCTCAGAGCCAGCTTGCTCTTaGGGCGGCAGGCACGACAGGGTGGTGTGCGTGGTACAGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: RWQSHCGTSSEPACS*GGRHDRVVCVVQGK Trigger: CTTGCCCTGTACCACGCACACCACCCTGTCGTGCCTGCCGCCTCAAGAGCAAGCTGGCTCTGAGCTTGTGCCGCAGTGACTTTGCCATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 90 bp | GGGGCTGAGCTCGTTGGGGCACATGCCAGGATGGCTTCCGGGATCTaGCAGCAGGTTGGTCTCCGAGGTCAGATGGATGAGCACGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: GAELVGAHARMASGI*QQVGLRGQMDEHED Trigger: GTCTTCGTGCTCATCCATCTGACCTCGGAGACCAACCTGCTGCCAGATCCCGGAAGCCATCCTGGCATGTGCCCCAACGAGCTCAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS CCA 90 bp | GCCTCTCTGTGGGTCAAAGCGCCAAAGGACATGATGGGGAGTAGGTaGCCCAACACAGGCTTGTGTGTCGGCCTGGCACTCAGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ASLWVKAPKDMMGSR*PNTGLCVGLALSQG Trigger: GCCTTGGCTGAGTGCCAGGCCGACACACAAGCCTGTGTTGGGCCACCTACTCCCCATCATGTCCTTTGGCGCTTTGACCCACAGAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 90 bp | AGCCAGCTTGCTCTTGAGGCGGCAGGCACGACAGGGTGGTGTGCGTaGTACAGGGCAAGCATCCTCACAGCTCTCCCGGGTCTCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: SQLALEAAGTTGWCA*YRASILTALPGLKV Trigger: AACTTTGAGACCCGGGAGAGCTGTGAGGATGCTTGCCCTGTACCACGCACACCACCCTGTCGTGCCTGCCGCCTCAAGAGCAAGCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 90 bp | GGCTTCCGGGATCTGGCAGCAGGTTGGTCTCCGAGGTCAGATGGATaGGCACGAAGACAAAGAGCAGAGGCAGGAATGGCTGTGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GFRDLAAGWSPRSDG*ARRQRAEAGMAVGQ Trigger: CTGCCCCACAGCCATTCCTGCCTCTGCTCTTTGTCTTCGTGCTCATCCATCTGACCTCGGAGACCAACCTGCTGCCAGATCCCGGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS GCA 90 bp | ACAGTCAGAACCCTGTTGTGGGCATTGGAAGCCTTCACAGGAGGCTaGTGTCTCAGGTACAGCTGGGCCACCACTGGGAAAGCGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TVRTLLWALEAFTGG*CLRYSWATTGKAGS Trigger: GCTGCCCGCTTTCCCAGTGGTGGCCCAGCTGTACCTGAGACAGCAGCCTCCTGTGAAGGCTTCCAATGCCCACAACAGGGTTCTGACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 90 bp | AAAGGGGAAAGTCGGCCCGCAGCAGGCCGGCAGCGTTTCGTGCAGTaGAGGTATACAGGCCCGCATCCTCCAACTGAGCATTGTAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: KGESRPAAGRQRFVQ*RYTGPHPPTEHCRG Trigger: TCCTCTACAATGCTCAGTTGGAGGATGCGGGCCTGTATACCTGCACTGCACGAAACGCTGCCGGCCTGCTGCGGGCCGACTTTCCCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 90 bp | AACGGAAAGGGGAAAGTCGGCCCGCAGCAGGCCGGCAGCGTTTCGTaGAGTGCAGGTATACAGGCCCGCATCCTCCAACTGAGCATTGTA | + |
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Preference number: 5 (lower is better) Translates to: NGKGKVGPQQAGSVS*SAGIQARILQLSIV Trigger: TACAATGCTCAGTTGGAGGATGCGGGCCTGTATACCTGCACTGCACGAAACGCTGCCGGCCTGCTGCGGGCCGACTTTCCCCTTTCCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 90 bp | CTCATAGGTCTCAAAGCCCCGGGCAGCCCCATCACATCTGAGGGCTaGGAATGTCATGCAGCTGCCTCTCTGTGGGTCAAAGCGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LIGLKAPGSPITSEG*ECHAAASLWVKAPK Trigger: CTTTGGCGCTTTGACCCACAGAGAGGCAGCTGCATGACATTCCCAGCCCTCAGATGTGATGGGGCTGCCCGGGGCTTTGAGACCTATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 90 bp | CCCATCACATCTGAGGGCTGGGAATGTCATGCAGCTGCCTCTCTGTaGGTCAAAGCGCCAAAGGACATGATGGGGAGTAGGTGGCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: PITSEGWECHAAASL*VKAPKDMMGSRWPN Trigger: GTTGGGCCACCTACTCCCCATCATGTCCTTTGGCGCTTTGACCCACAGAGAGGCAGCTGCATGACATTCCCAGCCCTCAGATGTGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 90 bp | CCATGCCACTCAATGTCACCTCCAGGTATTTGGTGCCCAAGAACTTaGGGCCCATCTTGTCGTCCTTTAGCACATCATCCAAGGCCACAC | + |
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Preference number: 5 (lower is better) Translates to: PCHSMSPPGIWCPRT*GPSCRPLAHHPRPH Trigger: GTGTGGCCTTGGATGATGTGCTAAAGGACGACAAGATGGGCCTCAAGTTCTTGGGCACCAAATACCTGGAGGTGACATTGAGTGGCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 90 bp | GTACAGGGCAAGCATCCTCACAGCTCTCCCGGGTCTCAAAGTTATTaGTGTTTCCTTCACAGCCACTGTATACAAAGGGGTGGCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: VQGKHPHSSPGSQSY*CFLHSHCIQRGGTA Trigger: AGCAGTGCCACCCCTTTGTATACAGTGGCTGTGAAGGAAACAGCAATAACTTTGAGACCCGGGAGAGCTGTGAGGATGCTTGCCCTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 72 bp | TGCCGCCTGCAGCCTCGGGCTCCTCCAGGACCTCTGTaGGTCTCCCCACGATGGCAAAGTCACTGCGGCACA | + |
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Preference number: 6 (lower is better) Translates to: CRLQPRAPPGPL*VSPRWQSHCGT Trigger: TGTGCCGCAGTGACTTTGCCATCGTGGGGAGACTCACAGAGGTCCTGGAGGAGCCCGAGGCTGCAGGCGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 72 bp | GGTGGTCCCGGGCTGCTGGGCGGCCAACTGAGAATGTaGTTACAGGGTACAACGTGCAGGTGGAGACCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGPGLLGGQLRM*LQGTTCRWRPR Trigger: GCGGGGTCTCCACCTGCACGTTGTACCCTGTAAGCACATTCTCAGTTGGCCGCCCAGCAGCCCGGGACCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 72 bp | GGGAAAGTCGGCCCGCAGCAGGCCGGCAGCGTTTCGTaGAGTGCAGGTATACAGGCCCGCATCCTCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: GKVGPQQAGSVS*SAGIQARILQL Trigger: CAGTTGGAGGATGCGGGCCTGTATACCTGCACTGCACGAAACGCTGCCGGCCTGCTGCGGGCCGACTTTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | GCTCTTGAGGCGGCAGGCACGACAGGGTGGTGTGCGTaGTACAGGGCAAGCATCCTCACAGCTCTCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: ALEAAGTTGWCA*YRASILTALPG Trigger: ACCCGGGAGAGCTGTGAGGATGCTTGCCCTGTACCACGCACACCACCCTGTCGTGCCTGCCGCCTCAAGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | AGGTGGGGGCTGAGCTCGTTGGGGCACATGCCAGGATaGCTTCCGGGATCTGGCAGCAGGTTGGTCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: RWGLSSLGHMPG*LPGSGSRLVSE Trigger: CTCGGAGACCAACCTGCTGCCAGATCCCGGAAGCCATCCTGGCATGTGCCCCAACGAGCTCAGCCCCCACCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS GCA 72 bp | AGTCGGCCCGCAGCAGGCCGGCAGCGTTTCGTGCAGTaGAGGTATACAGGCCCGCATCCTCCAACTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SRPAAGRQRFVQ*RYTGPHPPTEH Trigger: ATGCTCAGTTGGAGGATGCGGGCCTGTATACCTGCACTGCACGAAACGCTGCCGGCCTGCTGCGGGCCGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | GAAGCCTTCACAGGAGGCTGCTGTCTCAGGTACAGCTaGGCCACCACTGGGAAAGCGGGCAGCCACGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: EAFTGGCCLRYS*ATTGKAGSHAA Trigger: AGCTGCGTGGCTGCCCGCTTTCCCAGTGGTGGCCCAGCTGTACCTGAGACAGCAGCCTCCTGTGAAGGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 90 bp | CTCCCCACGATGGCAAAGTCACTGCGGCACAAGCTCAGAGCCAGCTaGCTCTTGAGGCGGCAGGCACGACAGGGTGGTGTGCGTGGTACA | + |
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Preference number: 6 (lower is better) Translates to: LPTMAKSLRHKLRAS*LLRRQARQGGVRGT Trigger: TGTACCACGCACACCACCCTGTCGTGCCTGCCGCCTCAAGAGCAAGCTGGCTCTGAGCTTGTGCCGCAGTGACTTTGCCATCGTGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 72 bp | AGTCACTGCGGCACAAGCTCAGAGCCAGCTTGCTCTTaGGGCGGCAGGCACGACAGGGTGGTGTGCGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SHCGTSSEPACS*GGRHDRVVCVV Trigger: TACCACGCACACCACCCTGTCGTGCCTGCCGCCTCAAGAGCAAGCTGGCTCTGAGCTTGTGCCGCAGTGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 72 bp | GGCGGCCAACTGAGAATGTGCTTACAGGGTACAACGTaGAGGTGGAGACCCCGCAGGCAGGCTTCTGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GGQLRMCLQGTT*RWRPRRQASAS Trigger: GGACGCAGAAGCCTGCCTGCGGGGTCTCCACCTGCACGTTGTACCCTGTAAGCACATTCTCAGTTGGCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS GCA 72 bp | CGTCCTTTAGCACATCATCCAAGGCCACACGAGCTATaGCGCCTGCAGCCTCGGGCTCCTCCAGGACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RPLAHHPRPHEL*RLQPRAPPGPL Trigger: CAGAGGTCCTGGAGGAGCCCGAGGCTGCAGGCGGCATAGCTCGTGTGGCCTTGGATGATGTGCTAAAGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 72 bp | AAGTCACTGCGGCACAAGCTCAGAGCCAGCTTGCTCTaGAGGCGGCAGGCACGACAGGGTGGTGTGCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: KSLRHKLRASLL*RRQARQGGVRG Trigger: ACCACGCACACCACCCTGTCGTGCCTGCCGCCTCAAGAGCAAGCTGGCTCTGAGCTTGTGCCGCAGTGACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 90 bp | ACGATGGCAAAGTCACTGCGGCACAAGCTCAGAGCCAGCTTGCTCTaGAGGCGGCAGGCACGACAGGGTGGTGTGCGTGGTACAGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: TMAKSLRHKLRASLL*RRQARQGGVRGTGQ Trigger: TTGCCCTGTACCACGCACACCACCCTGTCGTGCCTGCCGCCTCAAGAGCAAGCTGGCTCTGAGCTTGTGCCGCAGTGACTTTGCCATCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 90 bp | CGAACCTCACCCATGATGACCAGTGGCCCATCGACAGCTGTCACGTaGGGGCATGGGCAGGCCCAGTCCATGCCACTCAATGTCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RTSPMMTSGPSTAVT*GHGQAQSMPLNVTS Trigger: GGAGGTGACATTGAGTGGCATGGACTGGGCCTGCCCATGCCCCAACGTGACAGCTGTCGATGGGCCACTGGTCATCATGGGTGAGGTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | CTCGTTGGGGCACATGCCAGGATGGCTTCCGGGATCTaGCAGCAGGTTGGTCTCCGAGGTCAGATGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: LVGAHARMASGI*QQVGLRGQMDE Trigger: CTCATCCATCTGACCTCGGAGACCAACCTGCTGCCAGATCCCGGAAGCCATCCTGGCATGTGCCCCAACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS CAA 72 bp | ATGGCAAAGTCACTGCGGCACAAGCTCAGAGCCAGCTaGCTCTTGAGGCGGCAGGCACGACAGGGTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: MAKSLRHKLRAS*LLRRQARQGGV Trigger: CACACCACCCTGTCGTGCCTGCCGCCTCAAGAGCAAGCTGGCTCTGAGCTTGTGCCGCAGTGACTTTGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 72 bp | CCCATGATGACCAGTGGCCCATCGACAGCTGTCACGTaGGGGCATGGGCAGGCCCAGTCCATGCCACTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PMMTSGPSTAVT*GHGQAQSMPLN Trigger: ATTGAGTGGCATGGACTGGGCCTGCCCATGCCCCAACGTGACAGCTGTCGATGGGCCACTGGTCATCATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | TGGGTCAAAGCGCCAAAGGACATGATGGGGAGTAGGTaGCCCAACACAGGCTTGTGTGTCGGCCTGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: WVKAPKDMMGSR*PNTGLCVGLAL Trigger: GAGTGCCAGGCCGACACACAAGCCTGTGTTGGGCCACCTACTCCCCATCATGTCCTTTGGCGCTTTGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | CTCAAAGCCCCGGGCAGCCCCATCACATCTGAGGGCTaGGAATGTCATGCAGCTGCCTCTCTGTGGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LKAPGSPITSEG*ECHAAASLWVK Trigger: TTTGACCCACAGAGAGGCAGCTGCATGACATTCCCAGCCCTCAGATGTGATGGGGCTGCCCGGGGCTTTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 72 bp | AAGGACATGATGGGGAGTAGGTGGCCCAACACAGGCTaGTGTGTCGGCCTGGCACTCAGCCAAGGCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: KDMMGSRWPNTG*CVGLALSQGWD Trigger: ATCCCAGCCTTGGCTGAGTGCCAGGCCGACACACAAGCCTGTGTTGGGCCACCTACTCCCCATCATGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 90 bp | TCGTTGGGGCACATGCCAGGATGGCTTCCGGGATCTGGCAGCAGGTaGGTCTCCGAGGTCAGATGGATGAGCACGAAGACAAAGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLGHMPGWLPGSGSR*VSEVRWMSTKTKSR Trigger: TCTGCTCTTTGTCTTCGTGCTCATCCATCTGACCTCGGAGACCAACCTGCTGCCAGATCCCGGAAGCCATCCTGGCATGTGCCCCAACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS GCA 72 bp | ACCCTGTTGTGGGCATTGGAAGCCTTCACAGGAGGCTaGTGTCTCAGGTACAGCTGGGCCACCACTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: TLLWALEAFTGG*CLRYSWATTGK Trigger: TTTCCCAGTGGTGGCCCAGCTGTACCTGAGACAGCAGCCTCCTGTGAAGGCTTCCAATGCCCACAACAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 72 bp | CACTCAGCCAAGGCTGGGATACCTGGGTCCCTGTCCTaGGTAGTTGCCCGCTGTAAAACGGAAAGGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: HSAKAGIPGSLS*VVARCKTERGK Trigger: CTTTCCCCTTTCCGTTTTACAGCGGGCAACTACTCAGGACAGGGACCCAGGTATCCCAGCCTTGGCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | TCTGAGGGCTGGGAATGTCATGCAGCTGCCTCTCTGTaGGTCAAAGCGCCAAAGGACATGATGGGGAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SEGWECHAAASL*VKAPKDMMGSR Trigger: CCTACTCCCCATCATGTCCTTTGGCGCTTTGACCCACAGAGAGGCAGCTGCATGACATTCCCAGCCCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CCA 72 bp | CCGGGATCTGGCAGCAGGTTGGTCTCCGAGGTCAGATaGATGAGCACGAAGACAAAGAGCAGAGGCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PGSGSRLVSEVR*MSTKTKSRGRN Trigger: ATTCCTGCCTCTGCTCTTTGTCTTCGTGCTCATCCATCTGACCTCGGAGACCAACCTGCTGCCAGATCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS TCA 72 bp | GATCTGGCAGCAGGTTGGTCTCCGAGGTCAGATGGATaGGCACGAAGACAAAGAGCAGAGGCAGGAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: DLAAGWSPRSDG*ARRQRAEAGMA Trigger: AGCCATTCCTGCCTCTGCTCTTTGTCTTCGTGCTCATCCATCTGACCTCGGAGACCAACCTGCTGCCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176696.3 |
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| CDS CAA 90 bp | GGTACAGGGCAAGCATCCTCACAGCTCTCCCGGGTCTCAAAGTTATaGCTGTTTCCTTCACAGCCACTGTATACAAAGGGGTGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: GTGQASSQLSRVSKL*LFPSQPLYTKGWHC Trigger: GCAGTGCCACCCCTTTGTATACAGTGGCTGTGAAGGAAACAGCAATAACTTTGAGACCCGGGAGAGCTGTGAGGATGCTTGCCCTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 72 bp | CACAAGCCTTCTTCTCGAGCAGTTCCACAATCTTCTTaGCTCGCTTCTCGCTGGCAGCACGGACATAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HKPSSRAVPQSS*LASRWQHGHSC Trigger: ACAGCTATGTCCGTGCTGCCAGCGAGAAGCGAGTCAAGAAGATTGTGGAACTGCTCGAGAAGAAGGCTTGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 90 bp | TCCATGCCACTCAATGTCACCTCCAGGTATTTGGTGCCCAAGAACTaGAGGCCCATCTTGTCGTCCTTTAGCACATCATCCAAGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: SMPLNVTSRYLVPKN*RPILSSFSTSSKAT Trigger: TGTGGCCTTGGATGATGTGCTAAAGGACGACAAGATGGGCCTCAAGTTCTTGGGCACCAAATACCTGGAGGTGACATTGAGTGGCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 72 bp | CAAGCATCCTCACAGCTCTCCCGGGTCTCAAAGTTATaGCTGTTTCCTTCACAGCCACTGTATACAAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: QASSQLSRVSKL*LFPSQPLYTKG Trigger: CCCCTTTGTATACAGTGGCTGTGAAGGAAACAGCAATAACTTTGAGACCCGGGAGAGCTGTGAGGATGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS CAA 72 bp | CTCAATGTCACCTCCAGGTATTTGGTGCCCAAGAACTaGAGGCCCATCTTGTCGTCCTTTAGCACATCATCC | + |
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Preference number: 6 (lower is better) Translates to: LNVTSRYLVPKN*RPILSSFSTSS Trigger: GGATGATGTGCTAAAGGACGACAAGATGGGCCTCAAGTTCTTGGGCACCAAATACCTGGAGGTGACATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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| CDS TCA 72 bp | TCAATGTCACCTCCAGGTATTTGGTGCCCAAGAACTTaGGGCCCATCTTGTCGTCCTTTAGCACATCATCCA | + |
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Preference number: 6 (lower is better) Translates to: SMSPPGIWCPRT*GPSCRPLAHHP Trigger: TGGATGATGTGCTAAAGGACGACAAGATGGGCCTCAAGTTCTTGGGCACCAAATACCTGGAGGTGACATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095487.7 ENSMUST00000176696.3 |
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