Pregenerated sensors for WFDC9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074594

Ensembl transcript IDs: ENSMUST00000099095.4, ENSMUST00000109335.8

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	GACATCAAGGAAAGGACAAAGAGGCCCTTAGCTGGAGCGAGTGTCCCTCCAGGGAACACCAGGATCCCATaGGCAGATACAGTGAGGACG	+
Preference number: 4 (lower is better) Translates to: DIKERTKRPLAGASVPPGNTRIP*ADTVRT Trigger: CGTCCTCACTGTATCTGCCCATGGGATCCTGGTGTT...CCCTGGAGGGACACTCGCTCCAGCTAAGGGCCTCTTTGTCCTTTCCTTGATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109335.8
CDS-3UTR CAA 90 bp	AAGGAAAGGACAAAGAGGCCCTTAGCTGGAGCGAGTGTCCCTCCAGGGCAGCAGTTTTCCCACAAAACCTaGTCGGAGGCTGTACCCAAC	+
Preference number: 5 (lower is better) Translates to: KERTKRPLAGASVPPGQQFSHKT*SEAVPN Trigger: GTTGGGTACAGCCTCCGACAAGGTTTTGTGGGAAAA...CTGCTGCCCTGGAGGGACACTCGCTCCAGCTAAGGGCCTCTTTGTCCTTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109335.8
CDS GCA 90 bp	TCCAGCAGCACGTGTAATTTGGACTCACGCACTTCCGCACCTTCGTaGACCTTTTCCCACAAAACCTTGTCGGAGGCTGTACCCAACACT	+
Preference number: 5 (lower is better) Translates to: SSSTCNLDSRTSAPS*TFSHKTLSEAVPNT Trigger: AGTGTTGGGTACAGCCTCCGACAAGGTTTTGTGGGAAAAGGTGCACGAAGGTGCGGAAGTGCGTGAGTCCAAATTACACGTGCTGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS GCA 90 bp	CACTGGTCAATCTCTTCAAGGTCATCCTTGAGGCTTCCGAGAACGTaGAGAAACACCAGGATCCCATGGGCAGATACAGTGAGGACGATG	+
Preference number: 5 (lower is better) Translates to: HWSISSRSSLRLPRT*RNTRIPWADTVRTM Trigger: CATCGTCCTCACTGTATCTGCCCATGGGATCCTGGTGTTTCTGCACGTTCTCGGAAGCCTCAAGGATGACCTTGAAGAGATTGACCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS CCA 90 bp	GTGCACCTTTTCCCACAAAACCTTGTCGGAGGCTGTACCCAACACTaGTCAATCTCTTCAAGGTCATCCTTGAGGCTTCCGAGAACGTGC	+
Preference number: 5 (lower is better) Translates to: VHLFPQNLVGGCTQH*SISSRSSLRLPRTC Trigger: GCACGTTCTCGGAAGCCTCAAGGATGACCTTGAAGAGATTGACCAGTGTTGGGTACAGCCTCCGACAAGGTTTTGTGGGAAAAGGTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS-3UTR CAA 90 bp	TTTATTTGGCAAAAGCTTAGACTTCTCTGCATGAAGACATCAAGGAAAGGACAATCTTCAAGGTCATCCTaGAGGCTTCCGAGAACGTGC	+
Preference number: 5 (lower is better) Translates to: FIWQKLRLLCMKTSRKGQSSRSS*RLPRTC Trigger: GCACGTTCTCGGAAGCCTCAAGGATGACCTTGAAGA...TTGTCCTTTCCTTGATGTCTTCATGCAGAGAAGTCTAAGCTTTTGCCAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109335.8
CDS-3UTR CAA 90 bp	ACATTTATTTGGCAAAAGCTTAGACTTCTCTGCATGAAGACATCAAGGAAAGGATCAAAAGGTTCTTCATaGTTCAAGCAGATGTTTCCA	+
Preference number: 5 (lower is better) Translates to: TFIWQKLRLLCMKTSRKGSKGSS*FKQMFP Trigger: TGGAAACATCTGCTTGAACAATGAAGAACCTTTTGA...TCCTTTCCTTGATGTCTTCATGCAGAGAAGTCTAAGCTTTTGCCAAATAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109335.8
CDS CCA 72 bp	AGGCTTCCGAGAACGTGCAGAAACACCAGGATCCCATaGGCAGATACAGTGAGGACGATGATCCAAGGCTTC	+
Preference number: 6 (lower is better) Translates to: RLPRTCRNTRIP*ADTVRTMIQGF Trigger: GAAGCCTTGGATCATCGTCCTCACTGTATCTGCCCATGGGATCCTGGTGTTTCTGCACGTTCTCGGAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS CAA 90 bp	GACTCACGCACTTCCGCACCTTCGTGCACCTTTTCCCACAAAACCTaGTCGGAGGCTGTACCCAACACTGGTCAATCTCTTCAAGGTCAT	+
Preference number: 6 (lower is better) Translates to: DSRTSAPSCTFSHKT*SEAVPNTGQSLQGH Trigger: ATGACCTTGAAGAGATTGACCAGTGTTGGGTACAGCCTCCGACAAGGTTTTGTGGGAAAAGGTGCACGAAGGTGCGGAAGTGCGTGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS TCA 72 bp	GTACCCAACACTGGTCAATCTCTTCAAGGTCATCCTTaGGGCTTCCGAGAACGTGCAGAAACACCAGGATCC	+
Preference number: 6 (lower is better) Translates to: VPNTGQSLQGHP*GFRERAETPGS Trigger: GGATCCTGGTGTTTCTGCACGTTCTCGGAAGCCTCAAGGATGACCTTGAAGAGATTGACCAGTGTTGGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS GCA 72 bp	ATCTCTTCAAGGTCATCCTTGAGGCTTCCGAGAACGTaGAGAAACACCAGGATCCCATGGGCAGATACAGTG	+
Preference number: 6 (lower is better) Translates to: ISSRSSLRLPRT*RNTRIPWADTV Trigger: CACTGTATCTGCCCATGGGATCCTGGTGTTTCTGCACGTTCTCGGAAGCCTCAAGGATGACCTTGAAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS CCA 72 bp	TTCCCACAAAACCTTGTCGGAGGCTGTACCCAACACTaGTCAATCTCTTCAAGGTCATCCTTGAGGCTTCCG	+
Preference number: 6 (lower is better) Translates to: FPQNLVGGCTQH*SISSRSSLRLP Trigger: CGGAAGCCTCAAGGATGACCTTGAAGAGATTGACCAGTGTTGGGTACAGCCTCCGACAAGGTTTTGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS CAA 72 bp	ACTTCCGCACCTTCGTGCACCTTTTCCCACAAAACCTaGTCGGAGGCTGTACCCAACACTGGTCAATCTCTT	+
Preference number: 6 (lower is better) Translates to: TSAPSCTFSHKT*SEAVPNTGQSL Trigger: AAGAGATTGACCAGTGTTGGGTACAGCCTCCGACAAGGTTTTGTGGGAAAAGGTGCACGAAGGTGCGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8
CDS CAA 72 bp	TGTACCCAACACTGGTCAATCTCTTCAAGGTCATCCTaGAGGCTTCCGAGAACGTGCAGAAACACCAGGATC	+
Preference number: 6 (lower is better) Translates to: CTQHWSISSRSS*RLPRTCRNTRI Trigger: GATCCTGGTGTTTCTGCACGTTCTCGGAAGCCTCAAGGATGACCTTGAAGAGATTGACCAGTGTTGGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099095.4 ENSMUST00000109335.8