Pregenerated sensors for WFDC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070533Ensembl transcript IDs: ENSMUST00000094351.11, ENSMUST00000109338.2, ENSMUST00000109339.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGAATTAAATAGACAAGGGTCATCAGGTTTTGACCCCTGCAGATaGCACACCTGGCTGCCTTCCTCGGTTTACCTGGATGCTAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: RELNRQGSSGFDPCR*HTWLPSSVYLDAKL Trigger: CAGCTTAGCATCCAGGTAAACCGAGGAAGGCAGCCAGGTGTGTCATCTGCAGGGGTCAAAACCTGATGACCCTTGTCTATTTAATTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR TCA 90 bp | ACTTGCTATGAACTTATGGGATGTAAAAGTGCTTCAAAGGCCGTGTaGTCCACTCTCCTGAGAAGGGAGAAGAACAACAGTAAAGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: TCYELMGCKSASKAV*STLLRREKNNSKVF Trigger: AAACACTTTACTGTTGTTCTTCTCCCTTCTCAGGAGAGTGGATCACACGGCCTTTGAAGCACTTTTACATCCCATAAGTTCATAGCAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGAGAGGCGTGGCTGTGTGTCAGGCATTGCCCTGTGCTCATGGCTCAAGCGAGCATCCTGTGAAGTaGCAGCTAGACAGTTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VRRGVAVCQALPCAHGSSEHPVK*QLDSCV Trigger: GACACAACTGTCTAGCTGCCACTTCACAGGATGCTC...GCTTGAGCCATGAGCACAGGGCAATGCCTGACACACAGCCACGCCTCTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTTCAAAGGCCGTGTGATCCACTCTCCTGAGAAGGGAGAAGAACAACAGCTTCCTCGGTTTACCTaGATGCTAAGCTGGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: KCFKGRVIHSPEKGEEQQLPRFT*MLSWSS Trigger: TGAGGACCAGCTTAGCATCCAGGTAAACCGAGGAAG...CTGTTGTTCTTCTCCCTTCTCAGGAGAGTGGATCACACGGCCTTTGAAGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGCCCATGAGTCAAAGAGTCCAAGTAACTAGGTTTCTTTTCTTAATCCCCTTTGACCCCTGCAGATaGCACACCTGGCTGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KRPMSQRVQVTRFLFLIPFDPCR*HTWLPS Trigger: GGAAGGCAGCCAGGTGTGTCATCTGCAGGGGTCAAA...GGGGATTAAGAAAAGAAACCTAGTTACTTGGACTCTTTGACTCATGGGCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTTCAAAGGCCGTGTGATCCACTCTCCTGAGAAGGGAGAAGAACAACAGCTCTCCTTTTCTTTCTaGCTCTGGAGAGCAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: KCFKGRVIHSPEKGEEQQLSFSF*LWRAEP Trigger: AGGTTCTGCTCTCCAGAGCCAGAAAGAAAAGGAGAG...CTGTTGTTCTTCTCCCTTCTCAGGAGAGTGGATCACACGGCCTTTGAAGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR-3UTR TCA 90 bp | GACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAAGTGCTTTGTGATCCACTCTCCTaGGAAGGGAGAAGAACAACA | + |
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Preference number: 2 (lower is better) Translates to: DMNYCLKLAMNLWDVKVLCDPLS*EGRRTT Trigger: TGTTGTTCTTCTCCCTTCTCAGGAGAGTGGATCACA...AAGCACTTTTACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR-3UTR GCA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTACATGTAATCGATTCTaGTATAACTCCCTAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: DDLSLDETVLTCDIKTIATCNRF*YNSLNL Trigger: AAGGTTTAGGGAGTTATAGCAGAATCGATTACATGT...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| 3UTR-3UTR CCA 90 bp | GACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAAGTGCTTGACTTCAAAATAATATaGCACAAAGCAGACGATTTG | + |
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Preference number: 2 (lower is better) Translates to: DMNYCLKLAMNLWDVKVLDFKII*HKADDL Trigger: CAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTC...AAGCACTTTTACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR TCA 72 bp | TGTGCTCATGGCTCAAGCCCAGTCCATGGTGACCAGTaGGTCCCGGGACCCTCTGGACAGGCACACCATGCA | + |
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Preference number: 3 (lower is better) Translates to: CAHGSSPVHGDQ*VPGPSGQAHHA Trigger: TGCATGGTGTGCCTGTCCAGAGGGTCCCGGGACTCACTGGTCACCATGGACTGGGCTTGAGCCATGAGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| 3UTR TCA 72 bp | ATTTCGCCCCATATTCTGGTACAGAGTCTGCAGCTGTaGAGACTGGCAGTTGTCTGTGAGGCGAGAGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: ISPHILVQSLQL*RLAVVCEARGE Trigger: CTCACCTCTCGCCTCACAGACAACTGCCAGTCTTCACAGCTGCAGACTCTGTACCAGAATATGGGGCGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| 3UTR TCA 72 bp | AATAGACAAGGGTCATCAGGTTTTGACCCCTGCAGATaGCACACCTGGCTGCCTTCCTCGGTTTACCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: NRQGSSGFDPCR*HTWLPSSVYLD Trigger: ATCCAGGTAAACCGAGGAAGGCAGCCAGGTGTGTCATCTGCAGGGGTCAAAACCTGATGACCCTTGTCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR TCA 72 bp | TGTCACCGAGTGTGTGGACCTCACCCCAAAGGTGACTaGAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: CHRVCGPHPKGD*KDERVSLVYQG Trigger: TCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGTGAGGTCCACACACTCGGTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| 3UTR TCA 72 bp | GAACTTATGGGATGTAAAAGTGCTTCAAAGGCCGTGTaGTCCACTCTCCTGAGAAGGGAGAAGAACAACAGT | + |
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Preference number: 3 (lower is better) Translates to: ELMGCKSASKAV*STLLRREKNNS Trigger: ACTGTTGTTCTTCTCCCTTCTCAGGAGAGTGGATCACACGGCCTTTGAAGCACTTTTACATCCCATAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR-3UTR CAA 90 bp | GACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAAGTGCTTAAGGGTCATCAGGTTTaGACCCCTGCAGATGACACA | + |
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Preference number: 3 (lower is better) Translates to: DMNYCLKLAMNLWDVKVLKGHQV*TPADDT Trigger: TGTGTCATCTGCAGGGGTCAAAACCTGATGACCCTT...AAGCACTTTTACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGAGGCGTGGCTGTGTGTCAGGCATTGCCCTGTGCTCATGGCTCAAGCAAGAAGGGATCTGCCTaGGGTGGCGAGTTGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: VRRGVAVCQALPCAHGSSKKGSA*GGELRQ Trigger: CTGTCTCAACTCGCCACCCCAGGCAGATCCCTTCTT...GCTTGAGCCATGAGCACAGGGCAATGCCTGACACACAGCCACGCCTCTCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGAGGCGTGGCTGTGTGTCAGGCATTGCCCTGTGCTCATGGCTCAAGCGTTCTTACAGGAGGCTaGGCACTCCATTCGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: VRRGVAVCQALPCAHGSSVLTGG*ALHSHL Trigger: CAAATGCGAATGGAGTGCCCAGCCTCCTGTAAGAAC...GCTTGAGCCATGAGCACAGGGCAATGCCTGACACACAGCCACGCCTCTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| 3UTR CAA 72 bp | GTGGGAGGAGCATCCTGTGAAGTGGCAGCTAGACAGTaGTGTCACCGAGTGTGTGGACCTCACCCCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VGGASCEVAARQ*CHRVCGPHPKG Trigger: ACCTTTGGGGTGAGGTCCACACACTCGGTGACACAACTGTCTAGCTGCCACTTCACAGGATGCTCCTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| 3UTR CAA 72 bp | TTCTGGTACAGAGTCTGCAGCTGTGAAGACTGGCAGTaGTCTGTGAGGCGAGAGGTGAGGAGAGGCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: FWYRVCSCEDWQ*SVRREVRRGVA Trigger: AGCCACGCCTCTCCTCACCTCTCGCCTCACAGACAACTGCCAGTCTTCACAGCTGCAGACTCTGTACCAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR TCA 90 bp | CAGGTTTTGACCCCTGCAGATGACACACCTGGCTGCCTTCCTCGGTTTACCTGGCAGAGTCTGCAGCTGTaGAGACTGGCAGTTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QVLTPADDTPGCLPRFTWQSLQL*RLAVVC Trigger: ACAGACAACTGCCAGTCTTCACAGCTGCAGACTCTG...CCAGGTAAACCGAGGAAGGCAGCCAGGTGTGTCATCTGCAGGGGTCAAAACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR CCA 90 bp | CAGGTTTTGACCCCTGCAGATGACACACCTGGCTGCCTTCCTCGGTTTACCTGGTGCAGCTGTGAAGACTaGCAGTTGTCTGTGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QVLTPADDTPGCLPRFTWCSCED*QLSVRR Trigger: TCGCCTCACAGACAACTGCCAGTCTTCACAGCTGCA...CCAGGTAAACCGAGGAAGGCAGCCAGGTGTGTCATCTGCAGGGGTCAAAACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGACCACTCCACCAGGAGTaGGCAAGGGCGCGGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSLLSIRERPLHQE*ARARRD Trigger: GTCCCTCCGCGCCCTTGCCCACTCCTGGTGGAGTGG...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR GCA 90 bp | CAGGTTTTGACCCCTGCAGATGACACACCTGGCTGCCTTCCTCGGTTTACCTGGTGGCAGCACTTGAAATaGGCCTTACAGTTGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QVLTPADDTPGCLPRFTWWQHLK*ALQLKS Trigger: GGACTTCAACTGTAAGGCGCATTTCAAGTGCTGCCA...CCAGGTAAACCGAGGAAGGCAGCCAGGTGTGTCATCTGCAGGGGTCAAAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR GCA 90 bp | AAGTGCTTCAAAGGCCGTGTGATCCACTCTCCTGAGAAGGGAGAAGAACAACAGAAGCAAGAAGGGATCTaGCTGGGGTGGCGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KCFKGRVIHSPEKGEEQQKQEGI*LGWRVE Trigger: CTCAACTCGCCACCCCAGGCAGATCCCTTCTTGCTT...CTGTTGTTCTTCTCCCTTCTCAGGAGAGTGGATCACACGGCCTTTGAAGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR GCA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAAAGCAAGAAGGGATCTaGCTGGGGTGGCGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSLLSIRERKQEGI*LGWRVE Trigger: CTCAACTCGCCACCCCAGGCAGATCCCTTCTTGCTT...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR CCA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTCCACTCCACCAGGAGTaGGCAAGGGCGCGGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QDFKIIWHKADDLSLDETPLHQE*ARARRD Trigger: GTCCCTCCGCGCCCTTGCCCACTCCTGGTGGAGTGG...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR TCA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGACTGCACTGGTGCTTCTaGGAGTCAAAATACCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSLLSIRERLHWCF*ESKYQR Trigger: GCGCTGGTATTTTGACTCTCAGAAGCACCAGTGCAG...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR GCA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAGGACAGTCAATGTCCTaGAGGCACTTGGGTTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSLLSIRERGQSMS*RHLGLS Trigger: CGACAAACCCAAGTGCCTGCAGGACATTGACTGTCC...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR TCA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAAATGCGCCTTACAGTTaGAGTCCGTTTTGCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSLLSIRERNAPYS*SPFCRS Trigger: GCTCCTGCAAAACGGACTTCAACTGTAAGGCGCATT...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR TCA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGTCCATGGTGACCAGTaGGTCCCGGGACCCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWVHGDQ*VPGPSG Trigger: TCCAGAGGGTCCCGGGACTCACTGGTCACCATGGAC...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR GCA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGATGGCAGCACTTGAAATaGGCCTTACAGTTGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSLLSIRERWQHLK*ALQLKS Trigger: GGACTTCAACTGTAAGGCGCATTTCAAGTGCTGCCA...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR GCA 90 bp | AAGTGCTTCAAAGGCCGTGTGATCCACTCTCCTGAGAAGGGAGAAGAACAACAGTCTTCTCAACAAACATaGAAGCGTTTCTACAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KCFKGRVIHSPEKGEEQQSSQQT*KRFYSQ Trigger: CTGACTGTAGAAACGCTTGCATGTTTGTTGAGAAGA...CTGTTGTTCTTCTCCCTTCTCAGGAGAGTGGATCACACGGCCTTTGAAGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR TCA 90 bp | AAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAATTCTTACTGCGCTTCATGGGTaGGGAAACAGATGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: KVTEKMKGSLLSIRERILTALHG*GNRWRS Trigger: GCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGT...AAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR TCA 90 bp | AAGAACACCAAGAGAGAATTAAATAGACAAGGGTCATCAGGTTTTGACCCCTGCCACCCCAAAGGTGACTaGAAAGATGAAAGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KNTKRELNRQGSSGFDPCHPKGD*KDERVS Trigger: AGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGTG...GCAGGGGTCAAAACCTGATGACCCTTGTCTATTTAATTCTCTCTTGGTGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR CCA 90 bp | AAGAACACCAAGAGAGAATTAAATAGACAAGGGTCATCAGGTTTTGACCCCTGCCGCGTCAAAATGTCCTaGCAGTTTCCTTTGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KNTKRELNRQGSSGFDPCRVKMS*QFPLSE Trigger: CTCAGACAAAGGAAACTGCCAGGACATTTTGACGCG...GCAGGGGTCAAAACCTGATGACCCTTGTCTATTTAATTCTCTCTTGGTGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| 3UTR CAA 72 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTaGTCTATCAGGGAAAGAATTCTTCCTGGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSL*SIRERILPGCC Trigger: ACAGCAACCAGGAAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR GCA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTAAGCAAGAAGGGATCTaGCTGGGGTGGCGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QDFKIIWHKADDLSLDETKQEGI*LGWRVE Trigger: CTCAACTCGCCACCCCAGGCAGATCCCTTCTTGCTT...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR CCA 90 bp | TCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAGAAGGGATCTGCCTaGGGTGGCGAGTTGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: STYDMNYCLKLAMNLWDVKKGSA*GGELRQ Trigger: CTGTCTCAACTCGCCACCCCAGGCAGATCCCTTCTT...TACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR CCA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTAAGAAGGGATCTGCCTaGGGTGGCGAGTTGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: QDFKIIWHKADDLSLDETKKGSA*GGELRQ Trigger: CTGTCTCAACTCGCCACCCCAGGCAGATCCCTTCTT...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR CCA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTATTGCCCTGTGCTCATaGCTCAAGCCCAGTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: DDLSLDETVLTCDIKTIAIALCS*LKPSPW Trigger: CCATGGACTGGGCTTGAGCCATGAGCACAGGGCAAT...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR TCA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGACTGCGCTTCATGGGTaGGGAAACAGATGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWTALHG*GNRWRS Trigger: GCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGT...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR TCA 90 bp | GACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAAGTGCTTACTGCGCTTCATGGGTaGGGAAACAGATGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: DMNYCLKLAMNLWDVKVLTALHG*GNRWRS Trigger: GCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGT...AAGCACTTTTACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR TCA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTCTGCACTGGTGCTTCTaGGAGTCAAAATACCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: DDLSLDETVLTCDIKTIALHWCF*ESKYQR Trigger: GCGCTGGTATTTTGACTCTCAGAAGCACCAGTGCAG...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR TCA 90 bp | TCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTACTGCACTGGTGCTTCTaGGAGTCAAAATACCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: STYDMNYCLKLAMNLWDVLHWCF*ESKYQR Trigger: GCGCTGGTATTTTGACTCTCAGAAGCACCAGTGCAG...TACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR GCA 90 bp | AAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAATTCTTCTTCATAGGGATCCATaGATTTCCTCCCACAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: KVTEKMKGSLLSIRERILLHRDP*ISSHRQ Trigger: TTGCCTGTGGGAGGAAATGCATGGATCCCTATGAAG...AAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR GCA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGATCTTCTCAACAAACATaGAAGCGTTTCTACAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TPKVTEKMKGSLLSIRERSSQQT*KRFYSQ Trigger: CTGACTGTAGAAACGCTTGCATGTTTGTTGAGAAGA...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR CCA 90 bp | AAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAATTCTTCGCGTCAAAATGTCCTaGCAGTTTCCTTTGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVTEKMKGSLLSIRERILRVKMS*QFPLSE Trigger: CTCAGACAAAGGAAACTGCCAGGACATTTTGACGCG...AAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
||
| CDS-3UTR TCA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTAATGCGCCTTACAGTTaGAGTCCGTTTTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDFKIIWHKADDLSLDETNAPYS*SPFCRS Trigger: GCTCCTGCAAAACGGACTTCAACTGTAAGGCGCATT...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR GCA 90 bp | AAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAATTCTTTATGATGTTGAGGTCTaGTCCAAGGAGAGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVTEKMKGSLLSIRERILYDVEV*SKERKR Trigger: TCTCTTCCTCTCCTTGGAGCAGACCTCAACATCATA...AAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAATTCTTTGTATAGAAAGGCTCTaGACTGGTGCTTCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVTEKMKGSLLSIRERILCIERL*TGASES Trigger: ACTCTCAGAAGCACCAGTGCAGAGCCTTTCTATACA...AAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR GCA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTTTCTGGTACAGAGTCTaGAGCTGTGAAGACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DDLSLDETVLTCDIKTIAFWYRV*SCEDWQ Trigger: CTGCCAGTCTTCACAGCTGCAGACTCTGTACCAGAA...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGTTCTTACAGGAGGCTaGGCACTCCATTCGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWVLTGG*ALHSHL Trigger: CAAATGCGAATGGAGTGCCCAGCCTCCTGTAAGAAC...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTGTTCTTACAGGAGGCTaGGCACTCCATTCGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDFKIIWHKADDLSLDETVLTGG*ALHSHL Trigger: CAAATGCGAATGGAGTGCCCAGCCTCCTGTAAGAAC...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR CCA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTGAGCATCCTGTGAAGTaGCAGCTAGACAGTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DDLSLDETVLTCDIKTIAEHPVK*QLDSCV Trigger: GACACAACTGTCTAGCTGCCACTTCACAGGATGCTC...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR CCA 90 bp | GACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAAGTGCTTATTCCATGGATGCAGTaGGAGGAGCATCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DMNYCLKLAMNLWDVKVLIPWMQ*EEHPVK Trigger: CTTCACAGGATGCTCCTCCCACTGCATCCATGGAAT...AAGCACTTTTACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGCTCCCCAAAGGTGACTaGAAAGATGAAAGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWLPKGD*KDERVS Trigger: AGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGAG...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094351.11 |
||
| CDS-3UTR GCA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTTGGCAGCACTTGAAATaGGCCTTACAGTTGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDFKIIWHKADDLSLDETWQHLK*ALQLKS Trigger: GGACTTCAACTGTAAGGCGCATTTCAAGTGCTGCCA...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR GCA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTCTTCATAGGGATCCATaGATTTCCTCCCACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QDFKIIWHKADDLSLDETLHRDP*ISSHRQ Trigger: TTGCCTGTGGGAGGAAATGCATGGATCCCTATGAAG...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR GCA 90 bp | GACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAAGTGCTTCTTCATAGGGATCCATaGATTTCCTCCCACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DMNYCLKLAMNLWDVKVLLHRDP*ISSHRQ Trigger: TTGCCTGTGGGAGGAAATGCATGGATCCCTATGAAG...AAGCACTTTTACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR CCA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTCGCGTCAAAATGTCCTaGCAGTTTCCTTTGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DDLSLDETVLTCDIKTIARVKMS*QFPLSE Trigger: CTCAGACAAAGGAAACTGCCAGGACATTTTGACGCG...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR GCA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTTATGATGTTGAGGTCTaGTCCAAGGAGAGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DDLSLDETVLTCDIKTIAYDVEV*SKERKR Trigger: TCTCTTCCTCTCCTTGGAGCAGACCTCAACATCATA...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR GCA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGTGTATAGAAAGGCTCTaGACTGGTGCTTCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWCIERL*TGASES Trigger: ACTCTCAGAAGCACCAGTGCAGAGCCTTTCTATACA...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR GCA 90 bp | GACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAAGTGCTTTGTATAGAAAGGCTCTaGACTGGTGCTTCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DMNYCLKLAMNLWDVKVLCIERL*TGASES Trigger: ACTCTCAGAAGCACCAGTGCAGAGCCTTTCTATACA...AAGCACTTTTACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR GCA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGTCTTCTCAACAAACATaGAAGCGTTTCTACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWSSQQT*KRFYSQ Trigger: CTGACTGTAGAAACGCTTGCATGTTTGTTGAGAAGA...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| 3UTR CAA 72 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTaGTCTCTTGATGAAACTGTGCTAACTTGTGACATA | + |
|
Preference number: 4 (lower is better) Translates to: QDFKIIWHKADD*SLDETVLTCDI Trigger: TATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS CCA 90 bp | CCACTCCACCAGGAGTGGGCAAGGGCGCGGAGGGACTGCGCTTCATaGGTGAGGAAACAGATGGAGAAGCAAGAAGGGATCTGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLHQEWARARRDCAS*VRKQMEKQEGICLG Trigger: CCCCAGGCAGATCCCTTCTTGCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGTCCCTCCGCGCCCTTGCCCACTCCTGGTGGAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
||
| CDS TCA 90 bp | GAAACAGATGGAGAAGCAAGAAGGGATCTGCCTGGGGTGGCGAGTTaGGACAGGTCTGAAGCAGTCACCCGGGACTCTCTGTGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ETDGEARRDLPGVAS*DRSEAVTRDSLWHP Trigger: GGGGTGCCACAGAGAGTCCCGGGTGACTGCTTCAGACCTGTCTCAACTCGCCACCCCAGGCAGATCCCTTCTTGCTTCTCCATCTGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS TCA 90 bp | GCTGTCCAGGCCGAAAGCAGGAAACTAGCCAGACTCGGGCACAGATaGAGCCACACCTGGACTCGCAGCATTTCTCCTTCTCCGGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AVQAESRKLARLGHR*SHTWTRSISPSPGN Trigger: ATTGCCCGGAGAAGGAGAAATGCTGCGAGTCCAGGTGTGGCTTCATCTGTGCCCGAGTCTGGCTAGTTTCCTGCTTTCGGCCTGGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS CCA 90 bp | TGGGTGAGGAAACAGATGGAGAAGCAAGAAGGGATCTGCCTGGGGTaGCGAGTTGAGACAGGTCTGAAGCAGTCACCCGGGACTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WVRKQMEKQEGICLG*RVETGLKQSPGTLC Trigger: ACAGAGAGTCCCGGGTGACTGCTTCAGACCTGTCTCAACTCGCCACCCCAGGCAGATCCCTTCTTGCTTCTCCATCTGTTTCCTCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGAGGCGTGGCTGTGTGTCAGGCATTGCCCTGTGCTCATGGCTCAAGCATGTCCTGCAGGCACTaGGGTTTGTCGATCTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRRGVAVCQALPCAHGSSMSCRH*GLSILE Trigger: CTCTAAGATCGACAAACCCAAGTGCCTGCAGGACAT...GCTTGAGCCATGAGCACAGGGCAATGCCTGACACACAGCCACGCCTCTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGAGGCGTGGCTGTGTGTCAGGCATTGCCCTGTGCTCATGGCTCAAGCTTTCTACAGTCAGTCTaGGTGAGGAAGTTGTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRRGVAVCQALPCAHGSSFLQSV*VRKLFA Trigger: TGCGAACAACTTCCTCACCAAGACTGACTGTAGAAA...GCTTGAGCCATGAGCACAGGGCAATGCCTGACACACAGCCACGCCTCTCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGAGGCGTGGCTGTGTGTCAGGCATTGCCCTGTGCTCATGGCTCAAGCACACTCTCCCACTTTTaGTTTGATCTTGGCGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VRRGVAVCQALPCAHGSSTLSHF*FDLGVV Trigger: TACAACGCCAAGATCAAACAAAAAGTGGGAGAGTGT...GCTTGAGCCATGAGCACAGGGCAATGCCTGACACACAGCCACGCCTCTCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS GCA 90 bp | AGCGCGTCAAAATGTCCTGGCAGTTTCCTTTGTCTGAGGGTAGCATaGAGGGCTCTTCATAGGGATCCATGCATTTCCTCCCACAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SASKCPGSFLCLRVA*RALHRDPCISSHRQ Trigger: TTGCCTGTGGGAGGAAATGCATGGATCCCTATGAAGAGCCCTGCATGCTACCCTCAGACAAAGGAAACTGCCAGGACATTTTGACGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGAGGCGTGGCTGTGTGTCAGGCATTGCCCTGTGCTCATGGCTCAAGCTCTCCCACTTTTTGTTaGATCTTGGCGTTGTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: VRRGVAVCQALPCAHGSSSPTFC*ILALYD Trigger: ATCATACAACGCCAAGATCAAACAAAAAGTGGGAGA...GCTTGAGCCATGAGCACAGGGCAATGCCTGACACACAGCCACGCCTCTCCTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS TCA 90 bp | TTCCCACGGCATCCACTGTATAGAAAGGCTCTGCACTGGTGCTTCTaGGAGTCAAAATACCAGCGCGTCAAAATGTCCTGGCAGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FPRHPLYRKALHWCF*ESKYQRVKMSWQFP Trigger: AGGAAACTGCCAGGACATTTTGACGCGCTGGTATTTTGACTCTCAGAAGCACCAGTGCAGAGCCTTTCTATACAGTGGATGCCGTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS GCA 90 bp | GGATCCATGCATTTCCTCCCACAGGCAAATTGGCAGCACTTGAAATaGGCCTTACAGTTGAAGTCCGTTTTGCAGGAGCTCAAACTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GSMHFLPQANWQHLK*ALQLKSVLQELKLS Trigger: CGAGAGTTTGAGCTCCTGCAAAACGGACTTCAACTGTAAGGCGCATTTCAAGTGCTGCCAATTTGCCTGTGGGAGGAAATGCATGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | CAGGTTTTGACCCCTGCAGATGACACACCTGGCTGCCTTCCTCGGTTTACCTGGATGAAAGGGTCTCTCTaGTCTATCAGGGAAAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QVLTPADDTPGCLPRFTWMKGSL*SIRERI Trigger: AATTCTTTCCCTGATAGACAAGAGAGACCCTTTCAT...CCAGGTAAACCGAGGAAGGCAGCCAGGTGTGTCATCTGCAGGGGTCAAAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | AAGAACACCAAGAGAGAATTAAATAGACAAGGGTCATCAGGTTTTGACCCCTGCTCCTGGCAGTTTCCTTaGTCTGAGGGTAGCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KNTKRELNRQGSSGFDPCSWQFP*SEGSMQ Trigger: CTGCATGCTACCCTCAGACAAAGGAAACTGCCAGGA...GCAGGGGTCAAAACCTGATGACCCTTGTCTATTTAATTCTCTCTTGGTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAGCAAATTGGCAGCACTaGAAATGCGCCTTACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TPKVTEKMKGSLLSIRERANWQH*KCALQL Trigger: CAACTGTAAGGCGCATTTCAAGTGCTGCCAATTTGC...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGATGTTTGATCTTGGCGTaGTATGATGTTGAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPKVTEKMKGSLLSIRERCLILA*YDVEVC Trigger: GCAGACCTCAACATCATACAACGCCAAGATCAAACA...TCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
||
| CDS-3UTR CAA 90 bp | AAGAACACCAAGAGAGAATTAAATAGACAAGGGTCATCAGGTTTTGACCCCTGCGCAAATTGGCAGCACTaGAAATGCGCCTTACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KNTKRELNRQGSSGFDPCANWQH*KCALQL Trigger: CAACTGTAAGGCGCATTTCAAGTGCTGCCAATTTGC...GCAGGGGTCAAAACCTGATGACCCTTGTCTATTTAATTCTCTCTTGGTGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTGACTGAAAAGATGAAAGGGTCTCTCTTGTCTATCAGGGAAAGAATTCTTTCCTGGCAGTTTCCTTaGTCTGAGGGTAGCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KVTEKMKGSLLSIRERILSWQFP*SEGSMQ Trigger: CTGCATGCTACCCTCAGACAAAGGAAACTGCCAGGA...AAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
||
| CDS-3UTR CAA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTGCTGTGTGTCAGGCATaGCCCTGTGCTCATGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DDLSLDETVLTCDIKTIAAVCQA*PCAHGS Trigger: TGAGCCATGAGCACAGGGCAATGCCTGACACACAGC...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACACCAAGAGAGAATTAAATAGACAAGGGTCATCAGGTTTTGACCCCTGCTGTTTGATCTTGGCGTaGTATGATGTTGAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNTKRELNRQGSSGFDPCCLILA*YDVEVC Trigger: GCAGACCTCAACATCATACAACGCCAAGATCAAACA...GCAGGGGTCAAAACCTGATGACCCTTGTCTATTTAATTCTCTCTTGGTGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCCATGAGTCAAAGAGTCCAAGTAACTAGGTTTCTTTTCTTAATCCCCACACTCTCCCACTTTTaGTTTGATCTTGGCGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KRPMSQRVQVTRFLFLIPTLSHF*FDLGVV Trigger: TACAACGCCAAGATCAAACAAAAAGTGGGAGAGTGT...GGGGATTAAGAAAAGAAACCTAGTTACTTGGACTCTTTGACTCATGGGCCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTTCCTGGCAGTTTCCTTaGTCTGAGGGTAGCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DDLSLDETVLTCDIKTIASWQFP*SEGSMQ Trigger: CTGCATGCTACCCTCAGACAAAGGAAACTGCCAGGA...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | TCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAAAGAATTCTTCCTGGTaGCTGTCCAGGCCGAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: STYDMNYCLKLAMNLWDVKNSSW*LSRPKA Trigger: TGCTTTCGGCCTGGACAGCAACCAGGAAGAATTCTT...TACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | TCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGGATGTAGCAAATTGGCAGCACTaGAAATGCGCCTTACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STYDMNYCLKLAMNLWDVANWQH*KCALQL Trigger: CAACTGTAAGGCGCATTTCAAGTGCTGCCAATTTGC...TACATCCCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTTGTTTGATCTTGGCGTaGTATGATGTTGAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DDLSLDETVLTCDIKTIACLILA*YDVEVC Trigger: GCAGACCTCAACATCATACAACGCCAAGATCAAACA...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | GACGATTTGTCTCTTGATGAAACTGTGCTAACTTGTGACATAAAAACTATTGCTTTTCTACAGTCAGTCTaGGTGAGGAAGTTGTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DDLSLDETVLTCDIKTIAFLQSV*VRKLFA Trigger: TGCGAACAACTTCCTCACCAAGACTGACTGTAGAAA...AGCAATAGTTTTTATGTCACAAGTTAGCACAGTTTCATCAAGAGACAAATCGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
||
| CDS-3UTR CAA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTTTTCTACAGTCAGTCTaGGTGAGGAAGTTGTTCGCA | + |
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Preference number: 5 (lower is better) Translates to: QDFKIIWHKADDLSLDETFLQSV*VRKLFA Trigger: TGCGAACAACTTCCTCACCAAGACTGACTGTAGAAA...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGACACTCTCCCACTTTTaGTTTGATCTTGGCGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWTLSHF*FDLGVV Trigger: TACAACGCCAAGATCAAACAAAAAGTGGGAGAGTGT...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | CAAGACTTCAAAATAATATGGCACAAAGCAGACGATTTGTCTCTTGATGAAACTTCTCCCACTTTTTGTTaGATCTTGGCGTTGTATGAT | + |
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Preference number: 5 (lower is better) Translates to: QDFKIIWHKADDLSLDETSPTFC*ILALYD Trigger: ATCATACAACGCCAAGATCAAACAAAAAGTGGGAGA...AGTTTCATCAAGAGACAAATCGTCTGCTTTGTGCCATATTATTTTGAAGTCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS-3UTR CAA 90 bp | ACCTTATCAACCTATGACATGAACTATTGCCTTAAACTTGCTATGAACTTATGGATGAAAGGGTCTCTCTaGTCTATCAGGGAAAGAATT | + |
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Preference number: 5 (lower is better) Translates to: TLSTYDMNYCLKLAMNLWMKGSL*SIRERI Trigger: AATTCTTTCCCTGATAGACAAGAGAGACCCTTTCAT...CCATAAGTTCATAGCAAGTTTAAGGCAATAGTTCATGTCATAGGTTGATAAGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS TCA 72 bp | AAGGGATCTGCCTGGGGTGGCGAGTTGAGACAGGTCTaGAGCAGTCACCCGGGACTCTCTGTGGCACCCCAC | + |
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Preference number: 6 (lower is better) Translates to: KGSAWGGELRQV*SSHPGLSVAPH Trigger: GTGGGGTGCCACAGAGAGTCCCGGGTGACTGCTTCAGACCTGTCTCAACTCGCCACCCCAGGCAGATCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS GCA 72 bp | CCACTCCACCAGGAGTGGGCAAGGGCGCGGAGGGACTaGGCTTCATGGGTGAGGAAACAGATGGAGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: PLHQEWARARRD*ASWVRKQMEKQ Trigger: TTGCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGTCCCTCCGCGCCCTTGCCCACTCCTGGTGGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS TCA 72 bp | AGTGGGCAAGGGCGCGGAGGGACTGCGCTTCATGGGTaGGGAAACAGATGGAGAAGCAAGAAGGGATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SGQGRGGTALHG*GNRWRSKKGSA Trigger: GGCAGATCCCTTCTTGCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGTCCCTCCGCGCCCTTGCCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CCA 72 bp | CAGGAGTGGGCAAGGGCGCGGAGGGACTGCGCTTCATaGGTGAGGAAACAGATGGAGAAGCAAGAAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: QEWARARRDCAS*VRKQMEKQEGI Trigger: GATCCCTTCTTGCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGTCCCTCCGCGCCCTTGCCCACTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 90 bp | CACTTCTCATCCAGGGGACAGTCAATGTCCTGCAGGCACTTGGGTTaGTCGATCTTAGAGCACACTATGGGCTTCCGCGGGCAGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: HFSSRGQSMSCRHLG*SILEHTMGFRGQKP Trigger: GGGCTTCTGCCCGCGGAAGCCCATAGTGTGCTCTAAGATCGACAAACCCAAGTGCCTGCAGGACATTGACTGTCCCCTGGATGAGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS CAA 90 bp | GTGCAGCACTTCTCATCCAGGGGACAGTCAATGTCCTGCAGGCACTaGGGTTTGTCGATCTTAGAGCACACTATGGGCTTCCGCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VQHFSSRGQSMSCRH*GLSILEHTMGFRGQ Trigger: CTGCCCGCGGAAGCCCATAGTGTGCTCTAAGATCGACAAACCCAAGTGCCTGCAGGACATTGACTGTCCCCTGGATGAGAAGTGCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS CCA 72 bp | AAACAGATGGAGAAGCAAGAAGGGATCTGCCTGGGGTaGCGAGTTGAGACAGGTCTGAAGCAGTCACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: KQMEKQEGICLG*RVETGLKQSPG Trigger: CCCGGGTGACTGCTTCAGACCTGTCTCAACTCGCCACCCCAGGCAGATCCCTTCTTGCTTCTCCATCTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | TCCAGGGGACAGTCAATGTCCTGCAGGCACTTGGGTTaGTCGATCTTAGAGCACACTATGGGCTTCCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SRGQSMSCRHLG*SILEHTMGFRG Trigger: CCCGCGGAAGCCCATAGTGTGCTCTAAGATCGACAAACCCAAGTGCCTGCAGGACATTGACTGTCCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS TCA 72 bp | GCCGAAAGCAGGAAACTAGCCAGACTCGGGCACAGATaGAGCCACACCTGGACTCGCAGCATTTCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AESRKLARLGHR*SHTWTRSISPS Trigger: AGAAGGAGAAATGCTGCGAGTCCAGGTGTGGCTTCATCTGTGCCCGAGTCTGGCTAGTTTCCTGCTTTCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094351.11 ENSMUST00000109339.8 |
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| CDS CCA 72 bp | TCGTTCTTACAGGAGGCTGGGCACTCCATTCGCATTTaGAAAGGGAACAGCGGGCACTGTCCTTTCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SFLQEAGHSIRI*KGNSGHCPFFS Trigger: TGAGAAGAAAGGACAGTGCCCGCTGTTCCCTTTCCAAATGCGAATGGAGTGCCCAGCCTCCTGTAAGAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | TTCTCATCCAGGGGACAGTCAATGTCCTGCAGGCACTaGGGTTTGTCGATCTTAGAGCACACTATGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSSRGQSMSCRH*GLSILEHTMGF Trigger: GAAGCCCATAGTGTGCTCTAAGATCGACAAACCCAAGTGCCTGCAGGACATTGACTGTCCCCTGGATGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109338.2 |
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| CDS GCA 72 bp | CATTTCCTCCCACAGGCAAATTGGCAGCACTTGAAATaGGCCTTACAGTTGAAGTCCGTTTTGCAGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HFLPQANWQHLK*ALQLKSVLQEL Trigger: GAGCTCCTGCAAAACGGACTTCAACTGTAAGGCGCATTTCAAGTGCTGCCAATTTGCCTGTGGGAGGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | CGCTGCCTAGGACACTCTCCCACTTTTTGTTTGATCTaGGCGTTGTATGATGTTGAGGTCTGCTCCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RCLGHSPTFCLI*ALYDVEVCSKE Trigger: CTCCTTGGAGCAGACCTCAACATCATACAACGCCAAGATCAAACAAAAAGTGGGAGAGTGTCCTAGGCAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | TCCAACCGCTGCCTAGGACACTCTCCCACTTTTTGTTaGATCTTGGCGTTGTATGATGTTGAGGTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SNRCLGHSPTFC*ILALYDVEVCS Trigger: GGAGCAGACCTCAACATCATACAACGCCAAGATCAAACAAAAAGTGGGAGAGTGTCCTAGGCAGCGGTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 90 bp | AACCGCTGCCTAGGACACTCTCCCACTTTTTGTTTGATCTTGGCGTaGTATGATGTTGAGGTCTGCTCCAAGGAGAGGAAGAGAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: NRCLGHSPTFCLILA*YDVEVCSKERKRNS Trigger: GCTGTTTCTCTTCCTCTCCTTGGAGCAGACCTCAACATCATACAACGCCAAGATCAAACAAAAAGTGGGAGAGTGTCCTAGGCAGCGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 90 bp | GATCCACTCTCCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTaGTCTATCAGGGAAAGAATTCTTCCTGGTTGCTGTCCAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: DPLSPKVTEKMKGSL*SIRERILPGCCPGR Trigger: TCGGCCTGGACAGCAACCAGGAAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGAGAGTGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094351.11 |
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| CDS TCA 72 bp | CATCCACTGTATAGAAAGGCTCTGCACTGGTGCTTCTaGGAGTCAAAATACCAGCGCGTCAAAATGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HPLYRKALHWCF*ESKYQRVKMSW Trigger: CCAGGACATTTTGACGCGCTGGTATTTTGACTCTCAGAAGCACCAGTGCAGAGCCTTTCTATACAGTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | CAGCACTTGAAATGCGCCTTACAGTTGAAGTCCGTTTaGCAGGAGCTCAAACTCTCGTTTCTGCATTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: QHLKCALQLKSV*QELKLSFLHSN Trigger: GTTGGAATGCAGAAACGAGAGTTTGAGCTCCTGCAAAACGGACTTCAACTGTAAGGCGCATTTCAAGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | TTCATAGGGATCCATGCATTTCCTCCCACAGGCAAATaGGCAGCACTTGAAATGCGCCTTACAGTTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FIGIHAFPPTGK*AALEMRLTVEV Trigger: GACTTCAACTGTAAGGCGCATTTCAAGTGCTGCCAATTTGCCTGTGGGAGGAAATGCATGGATCCCTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | ATGCAAGCGTTTCTACAGTCAGTCTTGGTGAGGAAGTaGTTCGCATTCCCACGGCATCCACTGTATAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: MQAFLQSVLVRK*FAFPRHPLYRK Trigger: CTTTCTATACAGTGGATGCCGTGGGAATGCGAACAACTTCCTCACCAAGACTGACTGTAGAAACGCTTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094351.11 ENSMUST00000109338.2 ENSMUST00000109339.8 |
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| CDS CAA 72 bp | TCCCCAAAGGTGACTGAAAAGATGAAAGGGTCTCTCTaGTCTATCAGGGAAAGAATTCTTCCTGGTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SPKVTEKMKGSL*SIRERILPGCC Trigger: ACAGCAACCAGGAAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094351.11 |
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