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Pregenerated sensors for WFDC6B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070531

Ensembl transcript IDs: ENSMUST00000094346.3

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAACAAATCGGAGCCCTGAAAGTTGAGGTGATGAGAGTCCCAGGCTaGGGAGGGGGTCAAAGGTCGAAGGTCATGACACTTGAAGAGAAG +
Preference number: 1 (lower is better)
Translates to: EQIGALKVEVMRVPG*GGGQRSKVMTLEEK
Trigger: CTTCTCTTCAAGTGTCATGACCTTCGACCTTTGACCCCCTCCTCAGCCTGGGACTCTCATCACCTCAACTTTCAGGGCTCCGATTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
3UTR CCA 72 bp TCTAGGGTTCTGGTTTGGGAACAGCTAAAGTCTCAGTaGCTAAGACTTGGCCACTGGCGGCCAATCCGGAGC +
Preference number: 3 (lower is better)
Translates to: SRVLVWEQLKSQ*LRLGHWRPIRS
Trigger: GCTCCGGATTGGCCGCCAGTGGCCAAGTCTTAGCCACTGAGACTTTAGCTGTTCCCAAACCAGAACCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
3UTR TCA 72 bp CCAGATTTCATAGGAACAAATCGGAGCCCTGAAAGTTaGGGTGATGAGAGTCCCAGGCTGAGGAGGGGGTCA +
Preference number: 3 (lower is better)
Translates to: PDFIGTNRSPES*GDESPRLRRGS
Trigger: TGACCCCCTCCTCAGCCTGGGACTCTCATCACCTCAACTTTCAGGGCTCCGATTTGTTCCTATGAAATCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS-3UTR CCA 90 bp TTCCCGGGAAGAAGGCCTCAGATTAGGAGCCAAGACCTGGAGCTTCCTCCAGCTCAGGGACCAGCATCCTaGGGCAGACTGCATATATCT +
Preference number: 4 (lower is better)
Translates to: FPGRRPQIRSQDLELPPAQGPAS*GRLHIS
Trigger: AGATATATGCAGTCTGCCCCAGGATGCTGGTCCCTG...AGCTGGAGGAAGCTCCAGGTCTTGGCTCCTAATCTGAGGCCTTCTTCCCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS-3UTR TCA 90 bp TTCCCGGGAAGAAGGCCTCAGATTAGGAGCCAAGACCTGGAGCTTCCTCCAGCTTGCATATATCTTCGCTaGGGTCCAGGCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPGRRPQIRSQDLELPPACIYLR*GPGISS
Trigger: GGAGGAAATGCCTGGACCTCAGCGAAGATATATGCA...AGCTGGAGGAAGCTCCAGGTCTTGGCTCCTAATCTGAGGCCTTCTTCCCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS-3UTR GCA 90 bp GTCGGTTCCCGGGAAGAAGGCCTCAGATTAGGAGCCAAGACCTGGAGCTTCCTCTCCAGGAAGACATTTTaGGTTTGTTTATGCAAATGG +
Preference number: 4 (lower is better)
Translates to: VGSREEGLRLGAKTWSFLSRKTF*VCLCKW
Trigger: CCATTTGCATAAACAAACGCAAAATGTCTTCCTGGA...GAGGAAGCTCCAGGTCTTGGCTCCTAATCTGAGGCCTTCTTCCCGGGAACCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS-3UTR CCA 90 bp CGTCGGTTCCCGGGAAGAAGGCCTCAGATTAGGAGCCAAGACCTGGAGCTTCCTCTGTGTCGTAAACACTaGTTTCTTTCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RRFPGRRPQIRSQDLELPLCRKH*FLSSKS
Trigger: TGACTTTGAAGAAAGAAACCAGTGTTTACGACACAG...AGGAAGCTCCAGGTCTTGGCTCCTAATCTGAGGCCTTCTTCCCGGGAACCGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS-3UTR CCA 90 bp GGAGGGGGTCAAAGGTCGAAGGTCATGACACTTGAAGAGAAGCTGGGGTTGGGGATTCGATACAAAGCTTaGTGTCTTGGTTATACCACC +
Preference number: 4 (lower is better)
Translates to: GGGQRSKVMTLEEKLGLGIRYKA*CLGYTT
Trigger: GGTGGTATAACCAAGACACCAAGCTTTGTATCGAAT...CCCCAACCCCAGCTTCTCTTCAAGTGTCATGACCTTCGACCTTTGACCCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS TCA 90 bp CCAAGCAGGGACCAGCATCCTGGGGCAGACTGCATATATCTTCGCTaGGGTCCAGGCATTTCCTCCCACAGGCGAACAGGCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: PSRDQHPGADCIYLR*GPGISSHRRTGSTF
Trigger: AAAGGTGCTGCCTGTTCGCCTGTGGGAGGAAATGCCTGGACCTCAGCGAAGATATATGCAGTCTGCCCCAGGATGCTGGTCCCTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS-3UTR CAA 90 bp GAAGAAGGCCTCAGATTAGGAGCCAAGACCTGGAGCTTCCTCCAGCTCCTCCTTGTTGTTAGGGTTCCCTaGGCAACCACCATAGATGAA +
Preference number: 5 (lower is better)
Translates to: EEGLRLGAKTWSFLQLLLVVRVP*ATTIDE
Trigger: TTCATCTATGGTGGTTGCCAAGGGAACCCTAACAAC...AAGGAGGAGCTGGAGGAAGCTCCAGGTCTTGGCTCCTAATCTGAGGCCTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS TCA 72 bp GACCAGCATCCTGGGGCAGACTGCATATATCTTCGCTaGGGTCCAGGCATTTCCTCCCACAGGCGAACAGGC +
Preference number: 6 (lower is better)
Translates to: DQHPGADCIYLR*GPGISSHRRTG
Trigger: GCCTGTTCGCCTGTGGGAGGAAATGCCTGGACCTCAGCGAAGATATATGCAGTCTGCCCCAGGATGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS CCA 72 bp GTTCTTATAAAGACCCCCTCTGCCAGCGCAGGTTCCTaGATGCTCCACAGGAGGATGAAGGGGACCAGGAAT +
Preference number: 6 (lower is better)
Translates to: VLIKTPSASAGS*MLHRRMKGTRN
Trigger: ATTCCTGGTCCCCTTCATCCTCCTGTGGAGCATCCAGGAACCTGCGCTGGCAGAGGGGGTCTTTATAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS CAA 90 bp CCCTTGGCAACCACCATAGATGAATTCGATACAAAGCTTGGTGTCTaGGTTATACCACCAGCGTGGAAGGTAGGCCAAGCAGGGACCAGC +
Preference number: 6 (lower is better)
Translates to: PLATTIDEFDTKLGV*VIPPAWKVGQAGTS
Trigger: GCTGGTCCCTGCTTGGCCTACCTTCCACGCTGGTGGTATAACCAAGACACCAAGCTTTGTATCGAATTCATCTATGGTGGTTGCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS GCA 72 bp ATTATACTTTGGACATGTTCTTATAAAGACCCCCTCTaGCAGCGCAGGTTCCTGGATGCTCCACAGGAGGAT +
Preference number: 6 (lower is better)
Translates to: IILWTCSYKDPL*QRRFLDAPQED
Trigger: ATCCTCCTGTGGAGCATCCAGGAACCTGCGCTGGCAGAGGGGGTCTTTATAAGAACATGTCCAAAGTATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS CAA 72 bp ACCACCATAGATGAATTCGATACAAAGCTTGGTGTCTaGGTTATACCACCAGCGTGGAAGGTAGGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: TTIDEFDTKLGV*VIPPAWKVGQA
Trigger: TGCTTGGCCTACCTTCCACGCTGGTGGTATAACCAAGACACCAAGCTTTGTATCGAATTCATCTATGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS CAA 90 bp AATGGATGTACAGACAGCTTTAGATTCGAAGTTGTTAGGGTTCCCTaGGCAACCACCATAGATGAATTCGATACAAAGCTTGGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: NGCTDSFRFEVVRVP*ATTIDEFDTKLGVL
Trigger: CAAGACACCAAGCTTTGTATCGAATTCATCTATGGTGGTTGCCAAGGGAACCCTAACAACTTCGAATCTAAAGCTGTCTGTACATCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3
CDS CAA 72 bp ACAGACAGCTTTAGATTCGAAGTTGTTAGGGTTCCCTaGGCAACCACCATAGATGAATTCGATACAAAGCTT +
Preference number: 6 (lower is better)
Translates to: TDSFRFEVVRVP*ATTIDEFDTKL
Trigger: AAGCTTTGTATCGAATTCATCTATGGTGGTTGCCAAGGGAACCCTAACAACTTCGAATCTAAAGCTGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094346.3