Pregenerated sensors for WFDC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040154Ensembl transcript IDs: ENSMUST00000045127.12, ENSMUST00000131974.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTTCTGAGGTGGGATGGGAAGCCCAGCACAACAGTGGTGTGGGGTaGCGGAGCCGAATGATGAGCTATGCTTTTGATGTCTGGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: GSEVGWEAQHNSGVG*RSRMMSYAFDVWCG Trigger: TCCACACCAGACATCAAAAGCATAGCTCATCATTCGGCTCCGGCACCCCACACCACTGTTGTGCTGGGCTTCCCATCCCACCTCAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR CCA 90 bp | CTGGGTCGCAGGATCCCTGGCTGGCACATCATGATCTCTTTCTGGTaGGAACCACACCTGGGGTGCAGAGCCATAGATCGTAAGCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LGRRIPGWHIMISFW*EPHLGCRAIDRKPE Trigger: TTCTGGCTTACGATCTATGGCTCTGCACCCCAGGTGTGGTTCCCACCAGAAAGAGATCATGATGTGCCAGCCAGGGATCCTGCGACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR TCA 90 bp | CAACAGTGGTGTGGGGTGCCGGAGCCGAATGATGAGCTATGCTTTTaGTGTCTGGTGTGGACCTTGGCACTCAGAGGAGAATGCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QQWCGVPEPNDELCF*CLVWTLALRGECRR Trigger: CCTCCTGCATTCTCCTCTGAGTGCCAAGGTCCACACCAGACATCAAAAGCATAGCTCATCATTCGGCTCCGGCACCCCACACCACTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR CCA 90 bp | GAGCTGACAACAGGCCAGTGCTTGTCAGAAGGTCACAACTGTCTCTaGAGAGAAGATCTGGGTCGCAGGATCCCTGGCTGGCACATCATG | + |
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Preference number: 1 (lower is better) Translates to: ELTTGQCLSEGHNCL*REDLGRRIPGWHIM Trigger: CATGATGTGCCAGCCAGGGATCCTGCGACCCAGATCTTCTCTCCAGAGACAGTTGTGACCTTCTGACAAGCACTGGCCTGTTGTCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR CCA 90 bp | AGTGGAGGGAACAATGTACAGAGAGATATAACACTGGTTCTGAGGTaGGATGGGAAGCCCAGCACAACAGTGGTGTGGGGTGCCGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: SGGNNVQRDITLVLR*DGKPSTTVVWGAGA Trigger: GGCTCCGGCACCCCACACCACTGTTGTGCTGGGCTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTGTACATTGTTCCCTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR TCA 90 bp | CTCCTTTCTCAGCTGTCTGGGTCCAAGGAATGGACAGACCCTTGCTaGGTCCTCTCAAGAAACCCTTGTTTGGCCCTGACTCTAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LLSQLSGSKEWTDPC*VLSRNPCLALTLGW Trigger: CCAGCCTAGAGTCAGGGCCAAACAAGGGTTTCTTGAGAGGACTCAGCAAGGGTCTGTCCATTCCTTGGACCCAGACAGCTGAGAAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR GCA 90 bp | GGCTGGCACATCATGATCTCTTTCTGGTGGGAACCACACCTGGGGTaGAGAGCCATAGATCGTAAGCCAGAATTAGCCTTTGCTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: GWHIMISFWWEPHLG*RAIDRKPELAFAGV Trigger: GACCCCAGCAAAGGCTAATTCTGGCTTACGATCTATGGCTCTGCACCCCAGGTGTGGTTCCCACCAGAAAGAGATCATGATGTGCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR CCA 90 bp | AGGGAACAATGTACAGAGAGATATAACACTGGTTCTGAGGTGGGATaGGAAGCCCAGCACAACAGTGGTGTGGGGTGCCGGAGCCGAATG | + |
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Preference number: 1 (lower is better) Translates to: REQCTERYNTGSEVG*EAQHNSGVGCRSRM Trigger: CATTCGGCTCCGGCACCCCACACCACTGTTGTGCTGGGCTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTGTACATTGTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR CCA 90 bp | GTCTTAGCAAGCACTTGGCTACAACATGAAGCATCATCGACTCCCTaGGTCAGAGGCTCTCTCTTTGCTCCTGACTCTGCCAGGAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: VLASTWLQHEASSTP*VRGSLFAPDSARKL Trigger: CAGCTTCCTGGCAGAGTCAGGAGCAAAGAGAGAGCCTCTGACCCAGGGAGTCGATGATGCTTCATGTTGTAGCCAAGTGCTTGCTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR CCA 90 bp | TTCAGGGCTCGGGAGAGAAGGGGCTGCCTGGCTTGGCATTTGAAGTaGAGGGAACAATGTACAGAGAGATATAACACTGGTTCTGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: FRARERRGCLAWHLK*REQCTERYNTGSEV Trigger: CACCTCAGAACCAGTGTTATATCTCTCTGTACATTGTTCCCTCCACTTCAAATGCCAAGCCAGGCAGCCCCTTCTCTCCCGAGCCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR TCA 90 bp | ATATGGGACAATCCAAACGGTCTTAGCAAGCACTTGGCTACAACATaGAGCATCATCGACTCCCTGGGTCAGAGGCTCTCTCTTTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: IWDNPNGLSKHLATT*SIIDSLGQRLSLCS Trigger: GGAGCAAAGAGAGAGCCTCTGACCCAGGGAGTCGATGATGCTTCATGTTGTAGCCAAGTGCTTGCTAAGACCGTTTGGATTGTCCCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR TCA 90 bp | CAAGTGAGACACAGCCCAGTAGTGGAGACAGATGTACTCTACACATaGCATCCCAACTGCTGGAGCCCCTTTTCCTGGATATGGGACAAT | + |
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Preference number: 1 (lower is better) Translates to: QVRHSPVVETDVLYT*HPNCWSPFSWIWDN Trigger: ATTGTCCCATATCCAGGAAAAGGGGCTCCAGCAGTTGGGATGTCATGTGTAGAGTACATCTGTCTCCACTACTGGGCTGTGTCTCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR TCA 90 bp | GGCCCAGAAGGAGGCTCAGAAATATCCAGGAGCTCACAGATTCTGTaGCACCAGAAAGCTTTCTTTTCTCTACGTGTCACCTTGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: GPEGGSEISRSSQIL*HQKAFFSLRVTLEP Trigger: TGGCTCCAAGGTGACACGTAGAGAAAAGAAAGCTTTCTGGTGTCACAGAATCTGTGAGCTCCTGGATATTTCTGAGCCTCCTTCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR GCA 90 bp | GAGGTCAAGGCAGCAGGAGCTGGAAGCAGCTGGTTACAGTACATTTaGATTCAGAAGGGAGTGATGGATGATGCACACATGCTATGCTCA | + |
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Preference number: 1 (lower is better) Translates to: EVKAAGAGSSWLQYI*IQKGVMDDAHMLCS Trigger: TGAGCATAGCATGTGTGCATCATCCATCACTCCCTTCTGAATGCAAATGTACTGTAACCAGCTGCTTCCAGCTCCTGCTGCCTTGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR CCA 90 bp | TCAAGATACAGTCCTTTATGGTGGGGAGGTCAAGGCAGCAGGAGCTaGAAGCAGCTGGTTACAGTACATTTGCATTCAGAAGGGAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: SRYSPLWWGGQGSRS*KQLVTVHLHSEGSD Trigger: ATCACTCCCTTCTGAATGCAAATGTACTGTAACCAGCTGCTTCCAGCTCCTGCTGCCTTGACCTCCCCACCATAAAGGACTGTATCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR CCA 90 bp | AGATTCTGTGACACCAGAAAGCTTTCTTTTCTCTACGTGTCACCTTaGAGCCATGTTGTTGGCAACTGTTACTACAAGCCAACAGTTCGG | + |
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Preference number: 1 (lower is better) Translates to: RFCDTRKLSFLYVSP*SHVVGNCYYKPTVR Trigger: CCGAACTGTTGGCTTGTAGTAACAGTTGCCAACAACATGGCTCCAAGGTGACACGTAGAGAAAAGAAAGCTTTCTGGTGTCACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CCA 90 bp | AAGGCACCTCCTTTCTCAGCTGTCTGGGTCCAAGGAATGGACAGACCCTTGCTGGGGTCGCAGGATCCCTaGCTGGCACATCATGATCTC | + |
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Preference number: 2 (lower is better) Translates to: KAPPFSAVWVQGMDRPLLGSQDP*LAHHDL Trigger: GAGATCATGATGTGCCAGCCAGGGATCCTGCGACCC...CAGCAAGGGTCTGTCCATTCCTTGGACCCAGACAGCTGAGAAAGGAGGTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR TCA 90 bp | CAACCAAGGCCCAGAAGGAGGCTCAGAAATATCCAGGAGCTCACAGATTCTGTGGTGGCTCTGCAGGGATaGTGGGGACTGAGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: QPRPRRRLRNIQELTDSVVALQG*WGLRQH Trigger: ATGCTGCCTCAGTCCCCATCATCCCTGCAGAGCCAC...CACAGAATCTGTGAGCTCCTGGATATTTCTGAGCCTCCTTCTGGGCCTTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTGCCGGAGCCGAATGATGAGCTATGCTTTTGATGTCTGGTGTGGACCTTCTGGAGAGAAGATCTaGGTCGCAGGATCCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VGCRSRMMSYAFDVWCGPSGEKI*VAGSLA Trigger: AGCCAGGGATCCTGCGACCCAGATCTTCTCTCCAGA...AGGTCCACACCAGACATCAAAAGCATAGCTCATCATTCGGCTCCGGCACCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCACCTCCTTTCTCAGCTGTCTGGGTCCAAGGAATGGACAGACCCTTGCTGACACTGGTTCTGAGGTaGGATGGGAAGCCCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: KAPPFSAVWVQGMDRPLLTLVLR*DGKPST Trigger: TGTGCTGGGCTTCCCATCCCACCTCAGAACCAGTGT...CAGCAAGGGTCTGTCCATTCCTTGGACCCAGACAGCTGAGAAAGGAGGTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR CAA 90 bp | GCACCTCCTTTCTCAGCTGTCTGGGTCCAAGGAATGGACAGACCCTaGCTGAGTCCTCTCAAGAAACCCTTGTTTGGCCCTGACTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: APPFSAVWVQGMDRP*LSPLKKPLFGPDSR Trigger: CCTAGAGTCAGGGCCAAACAAGGGTTTCTTGAGAGGACTCAGCAAGGGTCTGTCCATTCCTTGGACCCAGACAGCTGAGAAAGGAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTGCTCCTGACTCTGCCAGGAAGCTGTCTCAGTCAGAATCCTGCATCTCTTTGGGGAGGATAGTCTaGAGGTGGGTTCAGGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: LFAPDSARKLSQSESCISLGRIV*RWVQGS Trigger: CGAGCCCTGAACCCACCTGCAGACTATCCTCCCCAA...AGAGATGCAGGATTCTGACTGAGACAGCTTCCTGGCAGAGTCAGGAGCAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR CAA 90 bp | GGTGGGTTCAGGGCTCGGGAGAGAAGGGGCTGCCTGGCTTGGCATTaGAAGTGGAGGGAACAATGTACAGAGAGATATAACACTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GGFRARERRGCLAWH*KWREQCTERYNTGS Trigger: AGAACCAGTGTTATATCTCTCTGTACATTGTTCCCTCCACTTCAAATGCCAAGCCAGGCAGCCCCTTCTCTCCCGAGCCCTGAACCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGTGTGGACCTTGGCACTCAGAGGAGAATGCAGGAGGCATGAGTTGTAAGCTGGCTGGCACATCATaGTCTCTTTCTGGTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: VWCGPWHSEENAGGMSCKLAGTS*SLSGGN Trigger: GTTCCCACCAGAAAGAGATCATGATGTGCCAGCCAG...CTTACAACTCATGCCTCCTGCATTCTCCTCTGAGTGCCAAGGTCCACACCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR-3UTR CCA 90 bp | CTATCTAGTGAGTCTGAGGACGAGAAGGGACATGGTGGGCAGAGACTATGGTCCCGCAGGATCCCTGGCTaGCACATCATGATCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LSSESEDEKGHGGQRLWSRRIPG*HIMISF Trigger: GAAAGAGATCATGATGTGCCAGCCAGGGATCCTGCG...GGACCATAGTCTCTGCCCACCATGTCCCTTCTCGTCCTCAGACTCACTAGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGCCCAGAAGGAGGCTCAGAAATATCCAGGAGCTCACAGATTCTGTGACCTGGCTGGCACATCATaGTCTCTTTCTGGTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TKAQKEAQKYPGAHRFCDLAGTS*SLSGGN Trigger: GTTCCCACCAGAAAGAGATCATGATGTGCCAGCCAG...GTCACAGAATCTGTGAGCTCCTGGATATTTCTGAGCCTCCTTCTGGGCCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR GCA 90 bp | CTATCTAGTGAGTCTGAGGACGAGAAGGGACATGGTGGGCAGAGACTATGGTCCCTGACAACAGGCCAGTaGTTGTCAGAAGGTCACAAC | + |
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Preference number: 2 (lower is better) Translates to: LSSESEDEKGHGGQRLWSLTTGQ*LSEGHN Trigger: GTTGTGACCTTCTGACAAGCACTGGCCTGTTGTCAG...GGACCATAGTCTCTGCCCACCATGTCCCTTCTCGTCCTCAGACTCACTAGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CCA 90 bp | CATAGTAGTCTGCCCCAAGTCTATCAGACAAAAGGCACCTCCTTTCTCAGCTGTTCTGGAGAGAAGATCTaGGTCGCAGGATCCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HSSLPQVYQTKGTSFLSCSGEKI*VAGSLA Trigger: AGCCAGGGATCCTGCGACCCAGATCTTCTCTCCAGA...ACAGCTGAGAAAGGAGGTGCCTTTTGTCTGATAGACTTGGGGCAGACTACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CCA 90 bp | CATAGTAGTCTGCCCCAAGTCTATCAGACAAAAGGCACCTCCTTTCTCAGCTGTGGTTCTGAGGTGGGATaGGAAGCCCAGCACAACAGT | + |
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Preference number: 2 (lower is better) Translates to: HSSLPQVYQTKGTSFLSCGSEVG*EAQHNS Trigger: ACTGTTGTGCTGGGCTTCCCATCCCACCTCAGAACC...ACAGCTGAGAAAGGAGGTGCCTTTTGTCTGATAGACTTGGGGCAGACTACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTCTGCCCCAAGTCTATCAGACAAAAGGCACCTCCTTTCTCAGCTGTCTGAATCAGGCTCTGCCTTaGCAGGTGGCCCTATTAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLPQVYQTKGTSFLSCLNQALP*QVALLA Trigger: AGCTAATAGGGCCACCTGCCAAGGCAGAGCCTGATT...CAGACAGCTGAGAAAGGAGGTGCCTTTTGTCTGATAGACTTGGGGCAGACTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAGCATGTGTGGATGGACTGATGTTTGGAAAATTCTTTCTGGACACACATCGGGAGAGAAGGGGCTaGCTGGCTTGGCATTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: EAACVDGLMFGKFFLDTHRERRG*LAWHLK Trigger: CTTCAAATGCCAAGCCAGGCAGCCCCTTCTCTCCCG...ATGTGTGTCCAGAAAGAATTTTCCAAACATCAGTCCATCCACACATGCTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGTAGTCTGCCCCAAGTCTATCAGACAAAAGGCACCTCCTTTCTCAGCTGTTTACACATTACGGGGTaGCTCTGCAGGGATGATGGG | + |
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Preference number: 2 (lower is better) Translates to: HSSLPQVYQTKGTSFLSCLHITG*LCRDDG Trigger: CCCATCATCCCTGCAGAGCCACCCCGTAATGTGTAA...ACAGCTGAGAAAGGAGGTGCCTTTTGTCTGATAGACTTGGGGCAGACTACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR TCA 90 bp | CATAGTAGTCTGCCCCAAGTCTATCAGACAAAAGGCACCTCCTTTCTCAGCTGTGATGAGCTATGCTTTTaGTGTCTGGTGTGGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: HSSLPQVYQTKGTSFLSCDELCF*CLVWTL Trigger: CAAGGTCCACACCAGACATCAAAAGCATAGCTCATC...ACAGCTGAGAAAGGAGGTGCCTTTTGTCTGATAGACTTGGGGCAGACTACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGCCCAGAAGGAGGCTCAGAAATATCCAGGAGCTCACAGATTCTGTGACGAATCCTGCATCTCTTaGCATCTCTTTAACCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TKAQKEAQKYPGAHRFCDESCIS*HLFNPC Trigger: ACAAGGGTTAAAGAGATGTCAAGAGATGCAGGATTC...GTCACAGAATCTGTGAGCTCCTGGATATTTCTGAGCCTCCTTCTGGGCCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CCA 90 bp | TGTGACACCAGAAAGCTTTCTTTTCTCTACGTGTCACCTTGGAGCCATGTTGTTGGTCACAACTGTCTCTaGAGAGAAGATCTGGGTCGC | + |
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Preference number: 2 (lower is better) Translates to: CDTRKLSFLYVSPWSHVVGHNCL*REDLGR Trigger: GCGACCCAGATCTTCTCTCCAGAGACAGTTGTGACC...AACAACATGGCTCCAAGGTGACACGTAGAGAAAAGAAAGCTTTCTGGTGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTGGATGGACTGATGTTTGGAAAATTCTTTCTGGACACACATTATTTTGGAACAGTGGTGTGGGGTaGCGGAGCCGAATGATGAGC | + |
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Preference number: 2 (lower is better) Translates to: MCGWTDVWKILSGHTLFWNSGVG*RSRMMS Trigger: GCTCATCATTCGGCTCCGGCACCCCACACCACTGTT...CCAAAATAATGTGTGTCCAGAAAGAATTTTCCAAACATCAGTCCATCCACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR TCA 72 bp | CACTCTCTCCATCTTCCAGACTGCAAAGGGAAGTGGTaGAGGACTCGCCTGGGTTACACCGCAAGGCCACGG | + |
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Preference number: 3 (lower is better) Translates to: HSLHLPDCKGKW*RTRLGYTARPR Trigger: CCGTGGCCTTGCGGTGTAACCCAGGCGAGTCCTTCACCACTTCCCTTTGCAGTCTGGAAGATGGAGAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR GCA 72 bp | GTGGGATGGGAAGCCCAGCACAACAGTGGTGTGGGGTaGCGGAGCCGAATGATGAGCTATGCTTTTGATGTC | + |
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Preference number: 3 (lower is better) Translates to: VGWEAQHNSGVG*RSRMMSYAFDV Trigger: GACATCAAAAGCATAGCTCATCATTCGGCTCCGGCACCCCACACCACTGTTGTGCTGGGCTTCCCATCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR CCA 72 bp | ACAGGCCAGTGCTTGTCAGAAGGTCACAACTGTCTCTaGAGAGAAGATCTGGGTCGCAGGATCCCTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: TGQCLSEGHNCL*REDLGRRIPGW Trigger: CCAGCCAGGGATCCTGCGACCCAGATCTTCTCTCCAGAGACAGTTGTGACCTTCTGACAAGCACTGGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR CCA 72 bp | TTCCAGACTGCAAAGGGAAGTGGTGAAGGACTCGCCTaGGTTACACCGCAAGGCCACGGGAACAGGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: FQTAKGSGEGLA*VTPQGHGNRTE Trigger: TTCTGTCCTGTTCCCGTGGCCTTGCGGTGTAACCCAGGCGAGTCCTTCACCACTTCCCTTTGCAGTCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR TCA 72 bp | GTGGACCTTGGCACTCAGAGGAGAATGCAGGAGGCATaGGTTGTAAGGGAGCTGACAACAGGCCAGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VDLGTQRRMQEA*VVRELTTGQCL Trigger: CAAGCACTGGCCTGTTGTCAGCTCCCTTACAACTCATGCCTCCTGCATTCTCCTCTGAGTGCCAAGGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR CCA 72 bp | TGTACAGAGAGATATAACACTGGTTCTGAGGTGGGATaGGAAGCCCAGCACAACAGTGGTGTGGGGTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: CTERYNTGSEVG*EAQHNSGVGCR Trigger: CCGGCACCCCACACCACTGTTGTGCTGGGCTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR TCA 72 bp | TGTGGGGTGCCGGAGCCGAATGATGAGCTATGCTTTTaGTGTCTGGTGTGGACCTTGGCACTCAGAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: CGVPEPNDELCF*CLVWTLALRGE Trigger: TTCTCCTCTGAGTGCCAAGGTCCACACCAGACATCAAAAGCATAGCTCATCATTCGGCTCCGGCACCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
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| 3UTR TCA 72 bp | CAGCTGTCTGGGTCCAAGGAATGGACAGACCCTTGCTaGGTCCTCTCAAGAAACCCTTGTTTGGCCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: QLSGSKEWTDPC*VLSRNPCLALT Trigger: AGTCAGGGCCAAACAAGGGTTTCTTGAGAGGACTCAGCAAGGGTCTGTCCATTCCTTGGACCCAGACAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR CCA 72 bp | GGTGGGGAGGTCAAGGCAGCAGGAGCTGGAAGCAGCTaGTTACAGTACATTTGCATTCAGAAGGGAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: GGEVKAAGAGSS*LQYICIQKGVM Trigger: CATCACTCCCTTCTGAATGCAAATGTACTGTAACCAGCTGCTTCCAGCTCCTGCTGCCTTGACCTCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTCCTCTCAAGAAACCCTTGTTTGGCCCTGACTCTAGGCTGGGAAATCAAGAATCAGGCTCTGCCTaGGCAGGTGGCCCTATTAGC | + |
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Preference number: 3 (lower is better) Translates to: LSPLKKPLFGPDSRLGNQESGSA*AGGPIS Trigger: GCTAATAGGGCCACCTGCCAAGGCAGAGCCTGATTC...TTGATTTCCCAGCCTAGAGTCAGGGCCAAACAAGGGTTTCTTGAGAGGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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| 3UTR-3UTR CAA 90 bp | CGAATGGGACAGACACTATCTAGTGAGTCTGAGGACGAGAAGGGACATGGTGGGCCTCTCAAGAAACCCTaGTTTGGCCCTGACTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RMGQTLSSESEDEKGHGGPLKKP*FGPDSR Trigger: CCTAGAGTCAGGGCCAAACAAGGGTTTCTTGAGAGG...CCCACCATGTCCCTTCTCGTCCTCAGACTCACTAGATAGTGTCTGTCCCATTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR CCA 72 bp | TGCCGGAGCCGAATGATGAGCTATGCTTTTGATGTCTaGTGTGGACCTTGGCACTCAGAGGAGAATGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CRSRMMSYAFDV*CGPWHSEENAG Trigger: TCCTGCATTCTCCTCTGAGTGCCAAGGTCCACACCAGACATCAAAAGCATAGCTCATCATTCGGCTCCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGAACAATGTACAGAGAGATATAACACTGGTTCTGAGGTGGGATGGGAAGTGTCTGGTGTGGACCTaGGCACTCAGAGGAGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: GGNNVQRDITLVLRWDGKCLVWT*ALRGEC Trigger: GCATTCTCCTCTGAGTGCCAAGGTCCACACCAGACA...CTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTGTACATTGTTCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGATACAGTCCTTTATGGTGGGGAGGTCAAGGCAGCAGGAGCTGGAAGCATGCCTGGCTTGGCATTaGAAGTGGAGGGAACAATGT | + |
|
Preference number: 3 (lower is better) Translates to: FKIQSFMVGRSRQQELEACLAWH*KWREQC Trigger: ACATTGTTCCCTCCACTTCAAATGCCAAGCCAGGCA...TGCTTCCAGCTCCTGCTGCCTTGACCTCCCCACCATAAAGGACTGTATCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR TCA 72 bp | CACAGCCCAGTAGTGGAGACAGATGTACTCTACACATaGCATCCCAACTGCTGGAGCCCCTTTTCCTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: HSPVVETDVLYT*HPNCWSPFSWI Trigger: TATCCAGGAAAAGGGGCTCCAGCAGTTGGGATGTCATGTGTAGAGTACATCTGTCTCCACTACTGGGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR CCA 72 bp | CTCTCAAGAAACCCTTGTTTGGCCCTGACTCTAGGCTaGGAAATCAAGGCAAGTGAGACACAGCCCAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSRNPCLALTLG*EIKASETQPSS Trigger: ACTACTGGGCTGTGTCTCACTTGCCTTGATTTCCCAGCCTAGAGTCAGGGCCAAACAAGGGTTTCTTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR CCA 72 bp | TCTATCAGACAAAAGGCACCTCCTTTCTCAGCTGTCTaGGTCCAAGGAATGGACAGACCCTTGCTGAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SIRQKAPPFSAV*VQGMDRPLLSP Trigger: AGGACTCAGCAAGGGTCTGTCCATTCCTTGGACCCAGACAGCTGAGAAAGGAGGTGCCTTTTGTCTGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGTAATGTCCAGAAGCTTGTCTTTCAGGCAGTTCTAGGCTATGCCAAGTTGTCAAGAAACCCTTGTTaGGCCCTGACTCTAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGNVQKLVFQAVLGYAKLSRNPC*ALTLGW Trigger: CCAGCCTAGAGTCAGGGCCAAACAAGGGTTTCTTGA...CAACTTGGCATAGCCTAGAACTGCCTGAAAGACAAGCTTCTGGACATTACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR GCA 72 bp | GCAGCAGGAGCTGGAAGCAGCTGGTTACAGTACATTTaGATTCAGAAGGGAGTGATGGATGATGCACACATG | + |
|
Preference number: 3 (lower is better) Translates to: AAGAGSSWLQYI*IQKGVMDDAHM Trigger: CATGTGTGCATCATCCATCACTCCCTTCTGAATGCAAATGTACTGTAACCAGCTGCTTCCAGCTCCTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR CCA 72 bp | AACAATGTACAGAGAGATATAACACTGGTTCTGAGGTaGGATGGGAAGCCCAGCACAACAGTGGTGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: NNVQRDITLVLR*DGKPSTTVVWG Trigger: ACCCCACACCACTGTTGTGCTGGGCTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTGTACATTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| 3UTR CCA 72 bp | AGTCCTTTATGGTGGGGAGGTCAAGGCAGCAGGAGCTaGAAGCAGCTGGTTACAGTACATTTGCATTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPLWWGGQGSRS*KQLVTVHLHSE Trigger: TTCTGAATGCAAATGTACTGTAACCAGCTGCTTCCAGCTCCTGCTGCCTTGACCTCCCCACCATAAAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGTACAGAGAGATATAACACTGGTTCTGAGGTGGGATGGGAAGCCCAGCACAACAGGCCAGTGCTaGTCAGAAGGTCACAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: NNVQRDITLVLRWDGKPSTTGQC*SEGHNC Trigger: ACAGTTGTGACCTTCTGACAAGCACTGGCCTGTTGT...GCTGGGCTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTGTACATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGATACAGTCCTTTATGGTGGGGAGGTCAAGGCAGCAGGAGCTGGAAGCATGCTGCCTCTGTCCGTaGATCTTGCAGATCTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FKIQSFMVGRSRQQELEACCLCP*ILQILF Trigger: AAATAAGATCTGCAAGATCAACGGACAGAGGCAGCA...TGCTTCCAGCTCCTGCTGCCTTGACCTCCCCACCATAAAGGACTGTATCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR TCA 72 bp | CAGAGACTATGGTCCCTTATATTATCTGTGTTAATGTaGTGGGTGGAGCAACCAAGGCCCAGAAGGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QRLWSLILSVLM*WVEQPRPRRRL Trigger: GAGCCTCCTTCTGGGCCTTGGTTGCTCCACCCATCACATTAACACAGATAATATAAGGGACCATAGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR GCA 72 bp | ATCATGATCTCTTTCTGGTGGGAACCACACCTGGGGTaGAGAGCCATAGATCGTAAGCCAGAATTAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IMISFWWEPHLG*RAIDRKPELAF Trigger: AAAGGCTAATTCTGGCTTACGATCTATGGCTCTGCACCCCAGGTGTGGTTCCCACCAGAAAGAGATCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR CCA 72 bp | ATGATGAGCTATGCTTTTGATGTCTGGTGTGGACCTTaGCACTCAGAGGAGAATGCAGGAGGCATGAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: MMSYAFDVWCGP*HSEENAGGMSC Trigger: ACAACTCATGCCTCCTGCATTCTCCTCTGAGTGCCAAGGTCCACACCAGACATCAAAAGCATAGCTCATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| 3UTR TCA 72 bp | GGAGGCTCAGAAATATCCAGGAGCTCACAGATTCTGTaGCACCAGAAAGCTTTCTTTTCTCTACGTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: GGSEISRSSQIL*HQKAFFSLRVT Trigger: GGTGACACGTAGAGAAAAGAAAGCTTTCTGGTGTCACAGAATCTGTGAGCTCCTGGATATTTCTGAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR TCA 72 bp | GCAGCTGGTTACAGTACATTTGCATTCAGAAGGGAGTaGTGGATGATGCACACATGCTATGCTCAGCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: AAGYSTFAFRRE*WMMHTCYAQLT Trigger: AGTGAGCTGAGCATAGCATGTGTGCATCATCCATCACTCCCTTCTGAATGCAAATGTACTGTAACCAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGATACAGTCCTTTATGGTGGGGAGGTCAAGGCAGCAGGAGCTGGAAGCATCCCTTGGAAATGAATaGTTAACATCCAAAAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FKIQSFMVGRSRQQELEASLGNE*LTSKSE Trigger: CTCACTTTTGGATGTTAACAATTCATTTCCAAGGGA...TGCTTCCAGCTCCTGCTGCCTTGACCTCCCCACCATAAAGGACTGTATCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR GCA 72 bp | AGAGACACAATTTTTAAGTTCGCCTCCATAGTAGTCTaGCCCAAGTCTATCAGACAAAAGGCACCTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RDTIFKFASIVV*PKSIRQKAPPF Trigger: GAAAGGAGGTGCCTTTTGTCTGATAGACTTGGGGCAGACTACTATGGAGGCGAACTTAAAAATTGTGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS-3UTR TCA 90 bp | GTCACAACTGTCTCTGGAGAGAAGATCTGGGTCGCAGGATCCCTGGCTGGCACACTGAGGCAGCGAAGTTaGTCCACGGGGCATTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTTVSGEKIWVAGSLAGTLRQRS*STGHLP Trigger: GGGCAAATGCCCCGTGGATCAACTTCGCTGCCTCAG...TGTGCCAGCCAGGGATCCTGCGACCCAGATCTTCTCTCCAGAGACAGTTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR CAA 72 bp | AGGGCTCGGGAGAGAAGGGGCTGCCTGGCTTGGCATTaGAAGTGGAGGGAACAATGTACAGAGAGATATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RARERRGCLAWH*KWREQCTERYN Trigger: GTTATATCTCTCTGTACATTGTTCCCTCCACTTCAAATGCCAAGCCAGGCAGCCCCTTCTCTCCCGAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| 3UTR CAA 72 bp | ATGGACAGACCCTTGCTGAGTCCTCTCAAGAAACCCTaGTTTGGCCCTGACTCTAGGCTGGGAAATCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MDRPLLSPLKKP*FGPDSRLGNQG Trigger: GCCTTGATTTCCCAGCCTAGAGTCAGGGCCAAACAAGGGTTTCTTGAGAGGACTCAGCAAGGGTCTGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| 3UTR CAA 72 bp | TTCTCAGCTGTCTGGGTCCAAGGAATGGACAGACCCTaGCTGAGTCCTCTCAAGAAACCCTTGTTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSAVWVQGMDRP*LSPLKKPLFGP Trigger: AGGGCCAAACAAGGGTTTCTTGAGAGGACTCAGCAAGGGTCTGTCCATTCCTTGGACCCAGACAGCTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAACAATGTACAGAGAGATATAACACTGGTTCTGAGGTGGGATGGGAAGAAGGCAACAGGCAAGTaGGTCTCCAAAGCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGNNVQRDITLVLRWDGKKATGK*VSKARR Trigger: CCTCCTGGCTTTGGAGACTCACTTGCCTGTTGCCTT...CTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTGTACATTGTTCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGATATAACACTGGTTCTGAGGTGGGATGGGAAGCCCAGCACAACAGTGGAGGAGTATTCTGGTTaGAGAGTCCATCGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRDITLVLRWDGKPSTTVEEYSG*RVHRLV Trigger: CACCAGACGATGGACTCTGCAACCAGAATACTCCTC...CACTGTTGTGCTGGGCTTCCCATCCCACCTCAGAACCAGTGTTATATCTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCAGAAGGTCACAACTGTCTCTGGAGAGAAGATCTGGGTCGCAGGATCCCTCAGGAGGAGTATTCTaGTTGCAGAGTCCATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVRRSQLSLERRSGSQDPSGGVF*LQSPSS Trigger: AGACGATGGACTCTGCAACCAGAATACTCCTCCTGA...GGGATCCTGCGACCCAGATCTTCTCTCCAGAGACAGTTGTGACCTTCTGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| CDS-3UTR TCA 90 bp | CTATCTAGTGAGTCTGAGGACGAGAAGGGACATGGTGGGCAGAGACTATGGTCCTTGTCATTCAAGCACTaGTCAGGAGGAGTATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSESEDEKGHGGQRLWSLSFKH*SGGVFW Trigger: CCAGAATACTCCTCCTGATCAGTGCTTGAATGACAA...GGACCATAGTCTCTGCCCACCATGTCCCTTCTCGTCCTCAGACTCACTAGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS-3UTR TCA 90 bp | TGTCAGAAGGTCACAACTGTCTCTGGAGAGAAGATCTGGGTCGCAGGATCCCTGTTGTCATTCAAGCACTaGTCAGGAGGAGTATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CQKVTTVSGEKIWVAGSLLSFKH*SGGVFW Trigger: CCAGAATACTCCTCCTGATCAGTGCTTGAATGACAA...CAGGGATCCTGCGACCCAGATCTTCTCTCCAGAGACAGTTGTGACCTTCTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTTGCTCCTGACTCTGCCAGGAAGCTGTCTCAGTCAGAATCCTGCATCTCTTCAGGAGGAGTATTCTaGTTGCAGAGTCCATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFAPDSARKLSQSESCISSGGVF*LQSPSS Trigger: AGACGATGGACTCTGCAACCAGAATACTCCTCCTGA...AGAGATGCAGGATTCTGACTGAGACAGCTTCCTGGCAGAGTCAGGAGCAAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS-3UTR GCA 90 bp | GGCAGCATGTGTGGATGGACTGATGTTTGGAAAATTCTTTCTGGACACACATTAGAGGAGTATTCTGGTTaGAGAGTCCATCGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSMCGWTDVWKILSGHTLEEYSG*RVHRLV Trigger: CACCAGACGATGGACTCTGCAACCAGAATACTCCTC...TAATGTGTGTCCAGAAAGAATTTTCCAAACATCAGTCCATCCACACATGCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| CDS TCA 90 bp | TCGGCAGTCCCGGCCACAGGCGCTGGCACAGCACCGCTTCTTGCCTaGGCAGTCCGAGTCTTTGTTACACATGTGCTTTGTGGGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVPATGAGTAPLLA*AVRVFVTHVLCGTE Trigger: CTCAGTCCCACAAAGCACATGTGTAACAAAGACTCGGACTGCTCAGGCAAGAAGCGGTGCTGTGCCAGCGCCTGTGGCCGGGACTGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS CCA 90 bp | AAATGGTACTTTTGCTGGGGTCTCGGCAGTCCCGGCCACAGGCGCTaGCACAGCACCGCTTCTTGCCTGAGCAGTCCGAGTCTTTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KWYFCWGLGSPGHRR*HSTASCLSSPSLCY Trigger: GTAACAAAGACTCGGACTGCTCAGGCAAGAAGCGGTGCTGTGCCAGCGCCTGTGGCCGGGACTGCCGAGACCCCAGCAAAAGTACCATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS CCA 90 bp | TCCACGGGGCATTTGCCCGACTTTACAAAGACACGAGGCATACACTaGAGGAAGCAGGCTCGGCGACAGCACTTCCAAGAAGAGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: STGHLPDFTKTRGIH*RKQARRQHFQEEGH Trigger: GTGTCCCTCTTCTTGGAAGTGCTGTCGCCGAGCCTGCTTCCTCCAGTGTATGCCTCGTGTCTTTGTAAAGTCGGGCAAATGCCCCGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS TCA 90 bp | GAGTCTTTGTTACACATGTGCTTTGTGGGACTGAGGCAGCGAAGTTaGTCCACGGGGCATTTGCCCGACTTTACAAAGACACGAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: ESLLHMCFVGLRQRS*STGHLPDFTKTRGI Trigger: TATGCCTCGTGTCTTTGTAAAGTCGGGCAAATGCCCCGTGGATCAACTTCGCTGCCTCAGTCCCACAAAGCACATGTGTAACAAAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGCATGTGTGGATGGACTGATGTTTGGAAAATTCTTTCTGGACACACATGGAGGAGTATTCTGGTaGCAGAGTCCATCGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EAACVDGLMFGKFFLDTHGGVFW*QSPSSG Trigger: ACCAGACGATGGACTCTGCAACCAGAATACTCCTCC...ATGTGTGTCCAGAAAGAATTTTCCAAACATCAGTCCATCCACACATGCTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGATGGACTGATGTTTGGAAAATTCTTTCTGGACACACATTATTTTGGGGAGGAGTATTCTGGTaGCAGAGTCCATCGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MCGWTDVWKILSGHTLFWGGVFW*QSPSSG Trigger: ACCAGACGATGGACTCTGCAACCAGAATACTCCTCC...CCAAAATAATGTGTGTCCAGAAAGAATTTTCCAAACATCAGTCCATCCACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045127.12 ENSMUST00000131974.2 |
||
| CDS CAA 90 bp | GGGTCTCGGCAGTCCCGGCCACAGGCGCTGGCACAGCACCGCTTCTaGCCTGAGCAGTCCGAGTCTTTGTTACACATGTGCTTTGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSRQSRPQALAQHRF*PEQSESLLHMCFVG Trigger: TCCCACAAAGCACATGTGTAACAAAGACTCGGACTGCTCAGGCAAGAAGCGGTGCTGTGCCAGCGCCTGTGGCCGGGACTGCCGAGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS TCA 72 bp | CCGGCCACAGGCGCTGGCACAGCACCGCTTCTTGCCTaGGCAGTCCGAGTCTTTGTTACACATGTGCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PATGAGTAPLLA*AVRVFVTHVLC Trigger: ACAAAGCACATGTGTAACAAAGACTCGGACTGCTCAGGCAAGAAGCGGTGCTGTGCCAGCGCCTGTGGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS CCA 72 bp | CATTTGCCCGACTTTACAAAGACACGAGGCATACACTaGAGGAAGCAGGCTCGGCGACAGCACTTCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HLPDFTKTRGIH*RKQARRQHFQE Trigger: TTCTTGGAAGTGCTGTCGCCGAGCCTGCTTCCTCCAGTGTATGCCTCGTGTCTTTGTAAAGTCGGGCAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS CAA 90 bp | CGAGTCTTTGTTACACATGTGCTTTGTGGGACTGAGGCAGCGAAGTaGATCCACGGGGCATTTGCCCGACTTTACAAAGACACGAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RVFVTHVLCGTEAAK*IHGAFARLYKDTRH Trigger: ATGCCTCGTGTCTTTGTAAAGTCGGGCAAATGCCCCGTGGATCAACTTCGCTGCCTCAGTCCCACAAAGCACATGTGTAACAAAGACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS CAA 72 bp | GTTACACATGTGCTTTGTGGGACTGAGGCAGCGAAGTaGATCCACGGGGCATTTGCCCGACTTTACAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VTHVLCGTEAAK*IHGAFARLYKD Trigger: GTCTTTGTAAAGTCGGGCAAATGCCCCGTGGATCAACTTCGCTGCCTCAGTCCCACAAAGCACATGTGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
||
| CDS TCA 72 bp | TTACACATGTGCTTTGTGGGACTGAGGCAGCGAAGTTaGTCCACGGGGCATTTGCCCGACTTTACAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: LHMCFVGLRQRS*STGHLPDFTKT Trigger: TGTCTTTGTAAAGTCGGGCAAATGCCCCGTGGATCAACTTCGCTGCCTCAGTCCCACAAAGCACATGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045127.12 |
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