Pregenerated sensors for WFDC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017723Ensembl transcript IDs: ENSMUST00000017867.10, ENSMUST00000109344.9, ENSMUST00000109345.9, ENSMUST00000125051.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCCATTGCTGAAAGCGATCACTTTATTGGTTAGAAAAAGGAGATaGTTTCATCGGACCAGGAAGAAATGCAAAGACCAGAGAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: SPLLKAITLLVRKRR*FHRTRKKCKDQRER Trigger: CCTTTCTCTCTGGTCTTTGCATTTCTTCCTGGTCCGATGAAAGCATCTCCTTTTTCTAACCAATAAAGTGATCGCTTTCAGCAATGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| 3UTR GCA 72 bp | ACCAGAGAGAAAGGAGGCCACAGGAACGACTCCAGATaGACAGTCCGGCAGAAACAACCTCTCTCCATTCCT | + |
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Preference number: 3 (lower is better) Translates to: TREKGGHRNDSR*TVRQKQPLSIP Trigger: AGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | GGAACGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCCACGCTGGGGCAGGTaGCCTGCTTTTCTCGGACAC | + |
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Preference number: 4 (lower is better) Translates to: GTTPDAQSGRNNLSPFLRPRWGR*PAFLGH Trigger: GTGTCCGAGAAAAGCAGGGCACCTGCCCCAGCGTGG...CCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS-3UTR GCA 90 bp | CCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGCTGGGGCAGGTGCCCTaGTTTTCTCGGACACCTAAG | + |
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Preference number: 4 (lower is better) Translates to: PDAQSGRNNLSPFLRLLELGQVP*FSRTPK Trigger: CTTAGGTGTCCGAGAAAAGCAGGGCACCTGCCCCAG...CTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS-3UTR CCA 90 bp | CACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGGCTGAAGCACCTAAGCCTTCCCTaGTCACAGCTGGTGGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: HSPAETTSLHSSGCWRLKHLSLP*SQLVAS Trigger: CGAAGCCACCAGCTGTGACCAGGGAAGGCTTAGGTG...CTTCAGCCTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS-3UTR CCA 90 bp | CACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGGCTGAAGTGGGTATGTCCACGCTaGGGCAGGTGCCCTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HSPAETTSLHSSGCWRLKWVCPR*GRCPAF Trigger: AAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCA...CTTCAGCCTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | ACCAGAGAGAAAGGAGGCCACAGGAACGACTCCAGATGCACAGTCCGGCAGAAACTGGGGCAGGTGCCCTaGTTTTCTGTGGCTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: TREKGGHRNDSRCTVRQKLGQVP*FSVAEM Trigger: CATCTCAGCCACAGAAAAGCAGGGCACCTGCCCCAG...TTTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109344.9 |
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| CDS-3UTR CCA 90 bp | CAGAGAGAAAGGAGGCCACAGGAACGACTCCAGATGCACAGTCCGGCAGAAACATGGGTATGTCCACGCTaGGGCAGGTGCCCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRERRPQERLQMHSPAETWVCPR*GRCPAF Trigger: AAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCA...TGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | CCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGGGCAGCATTTCATGTTaGCAGAACACTGGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PDAQSGRNNLSPFLRLLEGSISC*QNTGCP Trigger: TGGACAGCCAGTGTTCTGGCAACATGAAATGCTGCC...CTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | GACCAGAGAGAAAGGAGGCCACAGGAACGACTCCAGATGCACAGTCCGGCAGAAGGCAGCATTTCATGTTaGCAGAACACTGGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DQRERRPQERLQMHSPAEGSISC*QNTGCP Trigger: TGGACAGCCAGTGTTCTGGCAACATGAAATGCTGCC...TTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCTCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | CACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGGCTGAAGAGAATTTGGGTGTGGTaGAGGCCATCTTCCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: HSPAETTSLHSSGCWRLKRIWVW*RPSSHI Trigger: GATGTGGGAAGATGGCCTGCACCACACCCAAATTCT...CTTCAGCCTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | CGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCAGAATTTGGGTGTGGTaGAGGCCATCTTCCCACATC | + |
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Preference number: 4 (lower is better) Translates to: RLQMHSPAETTSLHSSGCRIWVW*RPSSHI Trigger: GATGTGGGAAGATGGCCTGCACCACACCCAAATTCT...GCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | CAGAGAGAAAGGAGGCCACAGGAACGACTCCAGATGCACAGTCCGGCAGAAACAGGCAGCATTTCATGTTaGCAGAACACTGGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QRERRPQERLQMHSPAETGSISC*QNTGCP Trigger: TGGACAGCCAGTGTTCTGGCAACATGAAATGCTGCC...TGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | CCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGTCTTCCCACATCCATTaGGGCAGCATTTCATGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PDAQSGRNNLSPFLRLLESSHIH*GSISCC Trigger: GCAACATGAAATGCTGCCGCAATGGATGTGGGAAGA...CTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | CGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTCTTCCCACATCCATTaGGGCAGCATTTCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQMHSPAETTSLHSSGCSSHIH*GSISCC Trigger: GCAACATGAAATGCTGCCGCAATGGATGTGGGAAGA...GCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAAAGGAGGCCACAGGAACGACTCCAGATGCACAGTCCGGCAGAAACAAGTAGTCCCAGTCTCTaGGAGTTTAGTATCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRERRPQERLQMHSPAETSSPSL*EFSICP Trigger: GGGACAGATACTAAACTCTCAGAGACTGGGACTACT...TGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS-3UTR GCA 90 bp | ACGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGTCTTCCCACATCCATTaGGGCAGCATTTCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTPDAQSGRNNLSPFLRLSSHIH*GSISCC Trigger: GCAACATGAAATGCTGCCGCAATGGATGTGGGAAGA...CAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR GCA 90 bp | CTGAAAGCGATCACTTTATTGGTTAGAAAAAGGAGATGCTTTCATCGGACCAGGCCACGCTGGGGCAGGTaGCCTGCTTTTCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKAITLLVRKRRCFHRTRPRWGR*PAFLWL Trigger: CAGCCACAGAAAAGCAGGGCACCTGCCCCAGCGTGG...CCTGGTCCGATGAAAGCATCTCCTTTTTCTAACCAATAAAGTGATCGCTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109344.9 |
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| CDS GCA 90 bp | TCACAGAGGCCGAGCTTGGGTATGTCCACGCTGGGGCAGGTGCCCTaGTTTTCATTAGGCTTGGAGCAGACAGAGCTGCAGCCCGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SQRPSLGMSTLGQVP*FSLGLEQTELQPAW Trigger: CCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGAAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCAAGCTCGGCCTCTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS CCA 90 bp | CGCTGGGGCAGGTGCCCTGCTTTTCTCGGACACCTAAGCCTTCCCTaGTCACAGCTGGTGGCTTCGTGGAGACTTGACCTCCCGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RWGRCPAFLGHLSLP*SQLVASWRLDLPVV Trigger: AACCACCGGGAGGTCAAGTCTCCACGAAGCCACCAGCTGTGACCAGGGAAGGCTTAGGTGTCCGAGAAAAGCAGGGCACCTGCCCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS CCA 90 bp | TCGCTCGGTCCATTAGGCTTGGAGCAGACAGAGCTGCAGCCCGCCTaGCAGCACTTGCGGTTGTCCGCACAGTCCTTGTCCAAAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: SLGPLGLEQTELQPA*QHLRLSAQSLSKVH Trigger: GTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGGACCGAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000125051.2 |
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| CDS-3UTR CAA 90 bp | CCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGTCACAGAGGCCGAGCTaGGGTATGTCCACGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PDAQSGRNNLSPFLRLLESQRPS*GMSTLG Trigger: CCCCAGCGTGGACATACCCAAGCTCGGCCTCTGTGA...CTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS CCA 90 bp | CCCTGCTTTTCATTAGGCTTGGAGCAGACAGAGCTGCAGCCCGCCTaGCAGCACTTGCGGTTGTCCGCACAGTCCTTGTCCAAAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: PCFSLGLEQTELQPA*QHLRLSAQSLSKVH Trigger: GTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGAAAAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | ACGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGTCACAGAGGCCGAGCTaGGGTATGTCCACGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: TTPDAQSGRNNLSPFLRLSQRPS*GMSTLG Trigger: CCCCAGCGTGGACATACCCAAGCTCGGCCTCTGTGA...CAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS TCA 90 bp | CCATTGCGGCAGCATTTCATGTTGCCAGAACACTGGCTGTCCACCTaGCACTGGTCCTCACAGAGGCCGAGCTTGGGTATGTCCACGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLRQHFMLPEHWLST*HWSSQRPSLGMSTL Trigger: CAGCGTGGACATACCCAAGCTCGGCCTCTGTGAGGACCAGTGTCAGGTGGACAGCCAGTGTTCTGGCAACATGAAATGCTGCCGCAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS GCA 90 bp | CAATGCTTGGCTTCAAAGTCCCCAGTCCTCTGGGACTTGAGCCTCTaGTTGGAAGCTTCCGCCATCCCGGGAGTTTCCCGCTCCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QCLASKSPVLWDLSL*LEASAIPGVSRSSS Trigger: TGAAGAGGAGCGGGAAACTCCCGGGATGGCGGAAGCTTCCAAGCAGAGGCTCAAGTCCCAGAGGACTGGGGACTTTGAAGCCAAGCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125051.2 |
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| CDS GCA 90 bp | TGGTGCAGGCCATCTTCCCACATCCATTGCGGCAGCATTTCATGTTaGCAGAACACTGGCTGTCCACCTGACACTGGTCCTCACAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: WCRPSSHIHCGSISC*QNTGCPPDTGPHRG Trigger: GCCTCTGTGAGGACCAGTGTCAGGTGGACAGCCAGTGTTCTGGCAACATGAAATGCTGCCGCAATGGATGTGGGAAGATGGCCTGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | AGAGAAAGGAGGCCACAGGAACGACTCCAGATGCACAGTCCGGCAGAAACAACCCTCGGTCCATTAGGCTaGGAGCAGACAGAGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RERRPQERLQMHSPAETTLGPLG*EQTELQ Trigger: CTGCAGCTCTGTCTGCTCCAAGCCTAATGGACCGAG...GGTTGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS-3UTR CAA 90 bp | CCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGCGGCAGCATTTCATGTaGCCAGAACACTGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PDAQSGRNNLSPFLRLLERQHFM*PEHWLS Trigger: GGACAGCCAGTGTTCTGGCAACATGAAATGCTGCCG...CTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | CGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCCGGCAGCATTTCATGTaGCCAGAACACTGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RLQMHSPAETTSLHSSGCRQHFM*PEHWLS Trigger: GGACAGCCAGTGTTCTGGCAACATGAAATGCTGCCG...GCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | ACCAGAGAGAAAGGAGGCCACAGGAACGACTCCAGATGCACAGTCCGGCAGAAATTGTCCGCACAGTCCTaGTCCAAAGTGCACTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: TREKGGHRNDSRCTVRQKLSAQS*SKVHSN Trigger: GTTGGAGTGCACTTTGGACAAGGACTGTGCGGACAA...TTTCTGCCGGACTGTGCATCTGGAGTCGTTCCTGTGGCCTCCTTTCTCTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | GGAACGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGTTGTCCGCACAGTCCTaGTCCAAAGTGCACTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: GTTPDAQSGRNNLSPFLRLSAQS*SKVHSN Trigger: GTTGGAGTGCACTTTGGACAAGGACTGTGCGGACAA...CCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | CAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGGTGCTTTTCATTAGGCTaGGAGCAGACAGAGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: QMHSPAETTSLHSSGCWRCFSLG*EQTELQ Trigger: CTGCAGCTCTGTCTGCTCCAAGCCTAATGAAAAGCA...CCTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | CACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGCTGCTGGAGGCTGAAGATCTTCCCACATCCATaGCGGCAGCATTTCATGTTG | + |
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Preference number: 5 (lower is better) Translates to: HSPAETTSLHSSGCWRLKIFPHP*RQHFML Trigger: CAACATGAAATGCTGCCGCAATGGATGTGGGAAGAT...CTTCAGCCTCCAGCAGCCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | GGAACGACTCCAGATGCACAGTCCGGCAGAAACAACCTCTCTCCATTCCTCAGGATCTTCCCACATCCATaGCGGCAGCATTTCATGTTG | + |
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Preference number: 5 (lower is better) Translates to: GTTPDAQSGRNNLSPFLRIFPHP*RQHFML Trigger: CAACATGAAATGCTGCCGCAATGGATGTGGGAAGAT...CCTGAGGAATGGAGAGAGGTTGTTTCTGCCGGACTGTGCATCTGGAGTCGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS-3UTR CAA 90 bp | CTGAAAGCGATCACTTTATTGGTTAGAAAAAGGAGATGCTTTCATCGGACCAGGCGGCAGCATTTCATGTaGCCAGAACACTGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LKAITLLVRKRRCFHRTRRQHFM*PEHWLS Trigger: GGACAGCCAGTGTTCTGGCAACATGAAATGCTGCCG...CCTGGTCCGATGAAAGCATCTCCTTTTTCTAACCAATAAAGTGATCGCTTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS CAA 72 bp | GTCCCTGAGAGCTCTCCTTCGCTCGGTCCATTAGGCTaGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VPESSPSLGPLG*EQTELQPAWQH Trigger: GTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGGACCGAGCGAAGGAGAGCTCTCAGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000125051.2 |
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| CDS CAA 72 bp | TCCACGCTGGGGCAGGTGCCCTGCTTTTCATTAGGCTaGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: STLGQVPCFSLG*EQTELQPAWQH Trigger: GTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGAAAAGCAGGGCACCTGCCCCAGCGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS CCA 72 bp | CCATTAGGCTTGGAGCAGACAGAGCTGCAGCCCGCCTaGCAGCACTTGCGGTTGTCCGCACAGTCCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLGLEQTELQPA*QHLRLSAQSLS Trigger: GGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000125051.2 |
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| CDS CCA 72 bp | GGTCCTCACAGAGGCCGAGCTTGGGTATGTCCACGCTaGGGCAGGTGCCCTGCTTTTCTCGGACACCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: GPHRGRAWVCPR*GRCPAFLGHLS Trigger: GCTTAGGTGTCCGAGAAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCAAGCTCGGCCTCTGTGAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS CCA 72 bp | GGTCCTCACAGAGGCCGAGCTTGGGTATGTCCACGCTaGGGCAGGTGCCCTGCTTTTCTGTGGCTGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: GPHRGRAWVCPR*GRCPAFLWLRW Trigger: CCATCTCAGCCACAGAAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCAAGCTCGGCCTCTGTGAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109344.9 |
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| CDS CAA 90 bp | GGCTTGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCACTTGCGGTaGTCCGCACAGTCCTTGTCCAAAGTGCACTCCAACACACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: GLEQTELQPAWQHLR*SAQSLSKVHSNTQS Trigger: GGACTGTGTGTTGGAGTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109345.9 ENSMUST00000125051.2 |
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| CDS CAA 90 bp | TTGGGTATGTCCACGCTGGGGCAGGTGCCCTGCTTTTCATTAGGCTaGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCACTTGCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGMSTLGQVPCFSLG*EQTELQPAWQHLRL Trigger: CAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGAAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS TCA 72 bp | GGCAGGTGCCCTGCTTTTCTGTGGCTGAGATGGGGGTaGACAGTAGCAACCCTAGTAGGAGGCCAGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GRCPAFLWLRWG*TVATLVGGQRP Trigger: TGGCCGCTGGCCTCCTACTAGGGTTGCTACTGTTCACCCCCATCTCAGCCACAGAAAAGCAGGGCACCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109344.9 |
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| CDS GCA 72 bp | TGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCACTTaGGGTTGTCCGCACAGTCCTTGTCCAAAGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: WSRQSCSPPGST*GCPHSPCPKCT Trigger: AGTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109345.9 ENSMUST00000125051.2 |
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| CDS GCA 72 bp | CCGAGCTTGGGTATGTCCACGCTGGGGCAGGTGCCCTaGTTTTCTCGGACACCTAAGCCTTCCCTGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: PSLGMSTLGQVP*FSRTPKPSLVT Trigger: TGTGACCAGGGAAGGCTTAGGTGTCCGAGAAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCAAGCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS GCA 72 bp | GCTTCAAAGTCCCCAGTCCTCTGGGACTTGAGCCTCTaGTTGGAAGCTTCCGCCATCCCGGGAGTTTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: ASKSPVLWDLSL*LEASAIPGVSR Trigger: GCGGGAAACTCCCGGGATGGCGGAAGCTTCCAAGCAGAGGCTCAAGTCCCAGAGGACTGGGGACTTTGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125051.2 |
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| CDS CCA 72 bp | TCATTAGGCTTGGAGCAGACAGAGCTGCAGCCCGCCTaGCAGCACTTGCGGTTGTCCGCACAGTCCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SLGLEQTELQPA*QHLRLSAQSLS Trigger: GGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS CAA 72 bp | CAGACAGAGCTGCAGCCCGCCTGGCAGCACTTGCGGTaGTCCGCACAGTCCTTGTCCAAAGTGCACTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: QTELQPAWQHLR*SAQSLSKVHSN Trigger: GTTGGAGTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109345.9 ENSMUST00000125051.2 |
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| CDS CAA 72 bp | TTGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCACTaGCGGTTGTCCGCACAGTCCTTGTCCAAAGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LEQTELQPAWQH*RLSAQSLSKVH Trigger: GTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109345.9 ENSMUST00000125051.2 |
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| CDS CAA 72 bp | TCAAAGTCCCCAGTCCTCTGGGACTTGAGCCTCTGCTaGGAAGCTTCCGCCATCCCGGGAGTTTCCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SKSPVLWDLSLC*EASAIPGVSRS Trigger: GGAGCGGGAAACTCCCGGGATGGCGGAAGCTTCCAAGCAGAGGCTCAAGTCCCAGAGGACTGGGGACTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125051.2 |
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| CDS TCA 72 bp | GTTTCTCTGCATCGGTGCCTGTGGCTGAGATGGGGGTaGACAGTAGCAACCCTAGTAGGAGGCCAGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VSLHRCLWLRWG*TVATLVGGQRP Trigger: TGGCCGCTGGCCTCCTACTAGGGTTGCTACTGTTCACCCCCATCTCAGCCACAGGCACCGATGCAGAGAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000109345.9 |
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| CDS TCA 72 bp | CCTTCCCTGGTCACAGCTGGTGGCTTCGTGGAGACTTaGCCTCCCGGTGGTTTAGTAGTGTGGTCAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PSLVTAGGFVET*PPGGLVVWSRP Trigger: GGGCCTTGACCACACTACTAAACCACCGGGAGGTCAAGTCTCCACGAAGCCACCAGCTGTGACCAGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017867.10 |
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| CDS GCA 72 bp | CCGAGCTTGGGTATGTCCACGCTGGGGCAGGTGCCCTaGTTTTCATTAGGCTTGGAGCAGACAGAGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSLGMSTLGQVP*FSLGLEQTELQ Trigger: CTGCAGCTCTGTCTGCTCCAAGCCTAATGAAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCAAGCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS CAA 90 bp | CCATTAGGCTTGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCACTaGCGGTTGTCCGCACAGTCCTTGTCCAAAGTGCACTCCAACACA | + |
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Preference number: 6 (lower is better) Translates to: PLGLEQTELQPAWQH*RLSAQSLSKVHSNT Trigger: TGTGTTGGAGTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000125051.2 |
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| CDS CAA 90 bp | TTAGTATCTGTCCCTGAGAGCTCTCCTTCGCTCGGTCCATTAGGCTaGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCACTTGCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LVSVPESSPSLGPLG*EQTELQPAWQHLRL Trigger: CAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGGACCGAGCGAAGGAGAGCTCTCAGGGACAGATACTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017867.10 ENSMUST00000125051.2 |
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| CDS CAA 90 bp | TCATTAGGCTTGGAGCAGACAGAGCTGCAGCCCGCCTGGCAGCACTaGCGGTTGTCCGCACAGTCCTTGTCCAAAGTGCACTCCAACACA | + |
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Preference number: 6 (lower is better) Translates to: SLGLEQTELQPAWQH*RLSAQSLSKVHSNT Trigger: TGTGTTGGAGTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGCTCCAAGCCTAATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109345.9 |
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| CDS TCA 72 bp | AATGCTTGGCTTCAAAGTCCCCAGTCCTCTGGGACTTaGGCCTCTGCTTGGAAGCTTCCGCCATCCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: NAWLQSPQSSGT*ASAWKLPPSRE Trigger: CTCCCGGGATGGCGGAAGCTTCCAAGCAGAGGCTCAAGTCCCAGAGGACTGGGGACTTTGAAGCCAAGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125051.2 |
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| CDS CAA 72 bp | CAATGCTTGGCTTCAAAGTCCCCAGTCCTCTGGGACTaGAGCCTCTGCTTGGAAGCTTCCGCCATCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: QCLASKSPVLWD*SLCLEASAIPG Trigger: TCCCGGGATGGCGGAAGCTTCCAAGCAGAGGCTCAAGTCCCAGAGGACTGGGGACTTTGAAGCCAAGCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125051.2 |
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| CDS TCA 72 bp | CAGCATTTCATGTTGCCAGAACACTGGCTGTCCACCTaGCACTGGTCCTCACAGAGGCCGAGCTTGGGTATG | + |
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Preference number: 6 (lower is better) Translates to: QHFMLPEHWLST*HWSSQRPSLGM Trigger: CATACCCAAGCTCGGCCTCTGTGAGGACCAGTGTCAGGTGGACAGCCAGTGTTCTGGCAACATGAAATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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| CDS GCA 72 bp | CCATCTTCCCACATCCATTGCGGCAGCATTTCATGTTaGCAGAACACTGGCTGTCCACCTGACACTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PSSHIHCGSISC*QNTGCPPDTGP Trigger: AGGACCAGTGTCAGGTGGACAGCCAGTGTTCTGGCAACATGAAATGCTGCCGCAATGGATGTGGGAAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017867.10 ENSMUST00000109344.9 ENSMUST00000109345.9 |
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