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Pregenerated sensors for WFDC17 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069792

Ensembl transcript IDs: ENSMUST00000092836.6

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GTTTATTTTGGACACAGACATATTAGGGCATTGTCACCACAATATAGATCTTCCTCCAACACTTTCTGGTaGAGGCTTGGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VYFGHRHIRALSPQYRSSSNTFW*RLGTSS
Trigger: GGAGCTTGTCCCAAGCCTTCACCAGAAAGTGTTGGA...GGAAGATCTATATTGTGGTGACAATGCCCTAATATGTCTGTGTCCAAAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS-3UTR TCA 90 bp TGGCCATCATTCATGTTTATGAAGATTGAATCCATCTTCCACATGGCTGTCAACGGAGTTTTGCAGACATaGCCACAGCTATTGCTACAG +
Preference number: 4 (lower is better)
Translates to: WPSFMFMKIESIFHMAVNGVLQT*PQLLLQ
Trigger: CTGTAGCAATAGCTGTGGTCATGTCTGCAAAACTCC...GTTGACAGCCATGTGGAAGATGGATTCAATCTTCATAAACATGAATGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS-3UTR GCA 90 bp AGATCTTCCTTGTCCAAGAATGCAATTCTAGGGCTAGGAAGTAGCCAAGCACAGAAAAGACAGGAGTTTTaGAGACATGACCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: RSSLSKNAILGLGSSQAQKRQEF*RHDHSY
Trigger: ATAGCTGTGGTCATGTCTGCAAAACTCCTGTCTTTT...CTGTGCTTGGCTACTTCCTAGCCCTAGAATTGCATTCTTGGACAAGGAAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS-3UTR TCA 90 bp TATAGATCTTCCTTGTCCAAGAATGCAATTCTAGGGCTAGGAAGTAGCCAAGCACCATCTCCTGAGCATTaGTCAACACAAATTCCAACA +
Preference number: 4 (lower is better)
Translates to: YRSSLSKNAILGLGSSQAPSPEH*STQIPT
Trigger: TGTTGGAATTTGTGTTGATCAATGCTCAGGAGATGG...TGCTTGGCTACTTCCTAGCCCTAGAATTGCATTCTTGGACAAGGAAGATCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS-3UTR CCA 90 bp CTCTGTGAATTCAGAAGAAATCTTCTGGGGCTGGCCATCATTCATGTTTATGAATTTCTGGTGAAGGCTTaGGACAAGCTCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LCEFRRNLLGLAIIHVYEFLVKA*DKLQVF
Trigger: AAAAACCTGGAGCTTGTCCCAAGCCTTCACCAGAAA...TTCATAAACATGAATGATGGCCAGCCCCAGAAGATTTCTTCTGAATTCACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
3UTR CAA 72 bp CATATTAGGGCATTGTCACCACAATATAGATCTTCCTaGTCCAAGAATGCAATTCTAGGGCTAGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HIRALSPQYRSS*SKNAILGLGSS
Trigger: GCTACTTCCTAGCCCTAGAATTGCATTCTTGGACAAGGAAGATCTATATTGTGGTGACAATGCCCTAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS-3UTR CCA 90 bp TATAGATCTTCCTTGTCCAAGAATGCAATTCTAGGGCTAGGAAGTAGCCAAGCAGTTTTTCAAATTCTTTaGGGCAAGACACTACATAGG +
Preference number: 4 (lower is better)
Translates to: YRSSLSKNAILGLGSSQAVFQIL*GKTLHR
Trigger: CCTATGTAGTGTCTTGCCCCAAAGAATTTGAAAAAC...TGCTTGGCTACTTCCTAGCCCTAGAATTGCATTCTTGGACAAGGAAGATCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
3UTR CAA 72 bp AGGGTAGTTTATTTTGGACACAGACATATTAGGGCATaGTCACCACAATATAGATCTTCCTTGTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: RVVYFGHRHIRA*SPQYRSSLSKN
Trigger: ATTCTTGGACAAGGAAGATCTATATTGTGGTGACAATGCCCTAATATGTCTGTGTCCAAAATAAACTACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS TCA 90 bp CTACAGCACTTCATGTTGCCAGGGCAGGATCCATCTCCTGAGCATTaGTCAACACAAATTCCAACACTTTCTGGTGAAGGCTTGGGACAA +
Preference number: 5 (lower is better)
Translates to: LQHFMLPGQDPSPEH*STQIPTLSGEGLGQ
Trigger: TTGTCCCAAGCCTTCACCAGAAAGTGTTGGAATTTGTGTTGATCAATGCTCAGGAGATGGATCCTGCCCTGGCAACATGAAGTGCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS-3UTR CAA 90 bp AGATCTTCCTTGTCCAAGAATGCAATTCTAGGGCTAGGAAGTAGCCAAGCACAGCTTTCTGGTGAAGGCTaGGGACAAGCTCCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: RSSLSKNAILGLGSSQAQLSGEG*GQAPGF
Trigger: AAAACCTGGAGCTTGTCCCAAGCCTTCACCAGAAAG...CTGTGCTTGGCTACTTCCTAGCCCTAGAATTGCATTCTTGGACAAGGAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS GCA 90 bp GAGTTTTGCAGACATGACCACAGCTATTGCTACAGCACTTCATGTTaGCAGGGCAGGATCCATCTCCTGAGCATTGATCAACACAAATTC +
Preference number: 5 (lower is better)
Translates to: EFCRHDHSYCYSTSC*QGRIHLLSIDQHKF
Trigger: GAATTTGTGTTGATCAATGCTCAGGAGATGGATCCTGCCCTGGCAACATGAAGTGCTGTAGCAATAGCTGTGGTCATGTCTGCAAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS GCA 72 bp AGACATGACCACAGCTATTGCTACAGCACTTCATGTTaGCAGGGCAGGATCCATCTCCTGAGCATTGATCAA +
Preference number: 6 (lower is better)
Translates to: RHDHSYCYSTSC*QGRIHLLSIDQ
Trigger: TTGATCAATGCTCAGGAGATGGATCCTGCCCTGGCAACATGAAGTGCTGTAGCAATAGCTGTGGTCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS GCA 72 bp AAAAGACAGGAGTTTTGCAGACATGACCACAGCTATTaGTACAGCACTTCATGTTGCCAGGGCAGGATCCAT +
Preference number: 6 (lower is better)
Translates to: KRQEFCRHDHSY*YSTSCCQGRIH
Trigger: ATGGATCCTGCCCTGGCAACATGAAGTGCTGTAGCAATAGCTGTGGTCATGTCTGCAAAACTCCTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6
CDS CCA 72 bp GATCAACACAAATTCCAACACTTTCTGGTGAAGGCTTaGGACAAGCTCCAGGTTTTTCAAATTCTTTGGGGC +
Preference number: 6 (lower is better)
Translates to: DQHKFQHFLVKA*DKLQVFQILWG
Trigger: GCCCCAAAGAATTTGAAAAACCTGGAGCTTGTCCCAAGCCTTCACCAGAAAGTGTTGGAATTTGTGTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092836.6