RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WFDC13 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067704

Ensembl transcript IDs: ENSMUST00000088260.2

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGAAAGGACACTCATCACAGTCGTGGGCAACAGCCTCTGCTGTTaGCCTCTGCCAGCAGCTCTGGTGCCAGGGCTGGGAGAGGGGAGC +
Preference number: 1 (lower is better)
Translates to: KERTLITVVGNSLCC*PLPAALVPGLGEGS
Trigger: GCTCCCCTCTCCCAGCCCTGGCACCAGAGCTGCTGGCAGAGGCCAACAGCAGAGGCTGTTGCCCACGACTGTGATGAGTGTCCTTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR GCA 90 bp AAGAAAAAGGAAAGGACACTCATCACAGTCGTGGGCAACAGCCTCTaGTGTTGGCCTCTGCCAGCAGCTCTGGTGCCAGGGCTGGGAGAG +
Preference number: 1 (lower is better)
Translates to: KKKERTLITVVGNSL*CWPLPAALVPGLGE
Trigger: CTCTCCCAGCCCTGGCACCAGAGCTGCTGGCAGAGGCCAACAGCAGAGGCTGTTGCCCACGACTGTGATGAGTGTCCTTTCCTTTTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR CCA 90 bp GTTCAGAGAGACAGGGGCAGAGATTCACAGCTTCAGTGGTGGAGGGATGATGAGCTCTGCCAGCAGCTCTaGTGCCAGGGCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: VQRDRGRDSQLQWWRDDELCQQL*CQGWER
Trigger: CCTCTCCCAGCCCTGGCACCAGAGCTGCTGGCAGAG...CTCATCATCCCTCCACCACTGAAGCTGTGAATCTCTGCCCCTGTCTCTCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR GCA 90 bp GCAACTATGAGTACGTTCAGAGAGACAGGGGCAGAGATTCACAGCTTCAGTGGTTCTGCTGTTGGCCTCTaGCAGCAGCTCTGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: ATMSTFRETGAEIHSFSGSAVGL*QQLWCQ
Trigger: CTGGCACCAGAGCTGCTGGCAGAGGCCAACAGCAGA...ACCACTGAAGCTGTGAATCTCTGCCCCTGTCTCTCTGAACGTACTCATAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR CCA 90 bp CGGCAGTGTCTCATCAGTGTCCTCGGTTCTTCTGGGACCAGGAAGGCCCCAGAAAGAGAGAGACAAGGATaGCAATATGGCAGAACCAGC +
Preference number: 2 (lower is better)
Translates to: RQCLISVLGSSGTRKAPERERQG*QYGRTS
Trigger: GCTGGTTCTGCCATATTGCCATCCTTGTCTCTCTCT...TTCTGGGGCCTTCCTGGTCCCAGAAGAACCGAGGACACTGATGAGACACTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR TCA 90 bp ACAGCTGGACATTTGCTCAGGGCACGGGACTTAGCAAAGAACGAGGCATTTCAAAACAGACATGCCGTGTaGGAGGAGCGGCAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: TAGHLLRARDLAKNEAFQNRHAV*EERQCL
Trigger: GAGACACTGCCGCTCCTCTCACACGGCATGTCTGTT...TTGAAATGCCTCGTTCTTTGCTAAGTCCCGTGCCCTGAGCAAATGTCCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR CCA 90 bp GTTCAGAGAGACAGGGGCAGAGATTCACAGCTTCAGTGGTGGAGGGATGATGAGCACTCATCACAGTCGTaGGCAACAGCCTCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: VQRDRGRDSQLQWWRDDEHSSQS*ATASAV
Trigger: AACAGCAGAGGCTGTTGCCCACGACTGTGATGAGTG...CTCATCATCCCTCCACCACTGAAGCTGTGAATCTCTGCCCCTGTCTCTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR GCA 90 bp GGTAAAGAGAGAGACAAGGATGGCAATATGGCAGAACCAGCAAGAAGAAAGAAAGTGGGCAACAGCCTCTaGTGTTGGCCTCTGCCAGCA +
Preference number: 2 (lower is better)
Translates to: GKERDKDGNMAEPARRKKVGNSL*CWPLPA
Trigger: TGCTGGCAGAGGCCAACAGCAGAGGCTGTTGCCCAC...TTTCTTTCTTCTTGCTGGTTCTGCCATATTGCCATCCTTGTCTCTCTCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR CAA 90 bp AGCAAAGAACGAGGCATTTCAATCTTTCCTCAAGACACTCAGCTGTaGAACGCCCTGCTGCTGATCTTTGGTCTAGACTTCATTTGGATA +
Preference number: 2 (lower is better)
Translates to: SKERGISIFPQDTQL*NALLLIFGLDFIWI
Trigger: TATCCAAATGAAGTCTAGACCAAAGATCAGCAGCAGGGCGTTCAACAGCTGAGTGTCTTGAGGAAAGATTGAAATGCCTCGTTCTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR CAA 90 bp TCAGCTGTTGAACGCCCTGCTGCTGATCTTTGGTCTAGACTTCATTaGGATATTGTGAGACATGGACAAGCAGAATCATCATCTATTCAA +
Preference number: 2 (lower is better)
Translates to: SAVERPAADLWSRLH*DIVRHGQAESSSIQ
Trigger: TTGAATAGATGATGATTCTGCTTGTCCATGTCTCACAATATCCAAATGAAGTCTAGACCAAAGATCAGCAGCAGGGCGTTCAACAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR GCA 72 bp GAAAGGACACTCATCACAGTCGTGGGCAACAGCCTCTaGTGTTGGCCTCTGCCAGCAGCTCTGGTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: ERTLITVVGNSL*CWPLPAALVPG
Trigger: CCCTGGCACCAGAGCTGCTGGCAGAGGCCAACAGCAGAGGCTGTTGCCCACGACTGTGATGAGTGTCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR CCA 72 bp GGAGCGGCAGTGTCTCATCAGTGTCCTCGGTTCTTCTaGGACCAGGAAGGCCCCAGAATAGAGTCAGAGGCA +
Preference number: 3 (lower is better)
Translates to: GAAVSHQCPRFF*DQEGPRIESEA
Trigger: TGCCTCTGACTCTATTCTGGGGCCTTCCTGGTCCCAGAAGAACCGAGGACACTGATGAGACACTGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR CAA 90 bp GCAACTATGAGTACGTTCAGAGAGACAGGGGCAGAGATTCACAGCTTCAGTGGTCAACAGCCTCTGCTGTaGGCCTCTGCCAGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: ATMSTFRETGAEIHSFSGQQPLL*ASASSS
Trigger: AGAGCTGCTGGCAGAGGCCAACAGCAGAGGCTGTTG...ACCACTGAAGCTGTGAATCTCTGCCCCTGTCTCTCTGAACGTACTCATAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR TCA 72 bp AGGGACTGTCGTATTAAAGGCAACAGACATGCCGTGTaGGAGGAGCGGCAGTGTCTCATCAGTGTCCTCGGT +
Preference number: 3 (lower is better)
Translates to: RDCRIKGNRHAV*EERQCLISVLG
Trigger: ACCGAGGACACTGATGAGACACTGCCGCTCCTCTCACACGGCATGTCTGTTGCCTTTAATACGACAGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR-3UTR CAA 90 bp GCAACTATGAGTACGTTCAGAGAGACAGGGGCAGAGATTCACAGCTTCAGTGGTCTGTGGAAATCATCCTaGGTAAAGAGAGAGACAAGG +
Preference number: 3 (lower is better)
Translates to: ATMSTFRETGAEIHSFSGLWKSS*VKRETR
Trigger: CCTTGTCTCTCTCTTTACCAAGGATGATTTCCACAG...ACCACTGAAGCTGTGAATCTCTGCCCCTGTCTCTCTGAACGTACTCATAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR CCA 72 bp GATGTACACCATCACTCTGAACATAGTCTACACAGCTaGACATTTGCTCAGGGCACGGGACTTAGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: DVHHHSEHSLHS*TFAQGTGLSKE
Trigger: TTCTTTGCTAAGTCCCGTGCCCTGAGCAAATGTCCAGCTGTGTAGACTATGTTCAGAGTGATGGTGTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR CCA 72 bp AGACACTCAGCTGTTGAACGCCCTGCTGCTGATCTTTaGTCTAGACTTCATTTGGATATTGTGAGACATGGA +
Preference number: 3 (lower is better)
Translates to: RHSAVERPAADL*SRLHLDIVRHG
Trigger: TCCATGTCTCACAATATCCAAATGAAGTCTAGACCAAAGATCAGCAGCAGGGCGTTCAACAGCTGAGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR TCA 90 bp GAGCGGCAGTGTCTCATCAGTGTCCTCGGTTCTTCTGGGACCAGGAAGGCCCCAGCTGTGGTGCTAGGCTaGGCACCAGCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ERQCLISVLGSSGTRKAPAVVLG*APAGAA
Trigger: TGCAGCTCCTGCTGGTGCTCAGCCTAGCACCACAGC...TGGGGCCTTCCTGGTCCCAGAAGAACCGAGGACACTGATGAGACACTGCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR CAA 72 bp CGAGGCATTTCAATCTTTCCTCAAGACACTCAGCTGTaGAACGCCCTGCTGCTGATCTTTGGTCTAGACTTC +
Preference number: 4 (lower is better)
Translates to: RGISIFPQDTQL*NALLLIFGLDF
Trigger: GAAGTCTAGACCAAAGATCAGCAGCAGGGCGTTCAACAGCTGAGTGTCTTGAGGAAAGATTGAAATGCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR GCA 90 bp TTAATTAGGAGTTCTGTGGAAATCATCCTTGGTAAAGAGAGAGACAAGGATGGCAGCACCAGCAGGAGCTaGAAAGGTGACACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LIRSSVEIILGKERDKDGSTSRS*KGDTGL
Trigger: GAGACCTGTGTCACCTTTGCAGCTCCTGCTGGTGCT...GCCATCCTTGTCTCTCTCTTTACCAAGGATGATTTCCACAGAACTCCTAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR CCA 90 bp AAATCATCCTTGGTAAAGAGAGAGACAAGGATGGCAATATGGCAGAACCAGCAACTCCGATCTGCACGGTaGAGGTTCCAGGATGTACTT +
Preference number: 4 (lower is better)
Translates to: KSSLVKRETRMAIWQNQQLRSAR*RFQDVL
Trigger: AAGTACATCCTGGAACCTCCACCGTGCAGATCGGAG...TTGCTGGTTCTGCCATATTGCCATCCTTGTCTCTCTCTTTACCAAGGATGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
3UTR CAA 72 bp GAACGCCCTGCTGCTGATCTTTGGTCTAGACTTCATTaGGATATTGTGAGACATGGACAAGCAGAATCATCA +
Preference number: 4 (lower is better)
Translates to: ERPAADLWSRLH*DIVRHGQAESS
Trigger: TGATGATTCTGCTTGTCCATGTCTCACAATATCCAAATGAAGTCTAGACCAAAGATCAGCAGCAGGGCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR CCA 90 bp AAATCATCCTTGGTAAAGAGAGAGACAAGGATGGCAATATGGCAGAACCAGCAATCAGAAAGTATTGCTTaGGACTTCCAAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: KSSLVKRETRMAIWQNQQSESIA*DFQALA
Trigger: AGCCAGTGCTTGGAAGTCCCAAGCAATACTTTCTGA...TTGCTGGTTCTGCCATATTGCCATCCTTGTCTCTCTCTTTACCAAGGATGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR TCA 90 bp TTGGATATTGTGAGACATGGACAAGCAGAATCATCATCTATTCAAACAGAGAAATACTGGGGCTTGGTTTaGGGTACACACTATCCCACA +
Preference number: 4 (lower is better)
Translates to: LDIVRHGQAESSSIQTEKYWGLV*GTHYPT
Trigger: TGTGGGATAGTGTGTACCTCAAACCAAGCCCCAGTA...TTTCTCTGTTTGAATAGATGATGATTCTGCTTGTCCATGTCTCACAATATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR CCA 90 bp TCTAGACTTCATTTGGATATTGTGAGACATGGACAAGCAGAATCATCATCTATTCCTAGTACTGGGGCTTaGTTTGAGGTACACACTATC +
Preference number: 4 (lower is better)
Translates to: SRLHLDIVRHGQAESSSIPSTGA*FEVHTI
Trigger: GATAGTGTGTACCTCAAACCAAGCCCCAGTACTAGG...AATAGATGATGATTCTGCTTGTCCATGTCTCACAATATCCAAATGAAGTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS GCA 90 bp CCTCCTGCTGCGTACAGAACATGTTGCACGCTCCGGGCTCCGATCTaGACGGTGGAGGTTCCAGGATGTACTTCAGAAAGTATTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PPAAYRTCCTLRAPI*TVEVPGCTSESIAW
Trigger: CCAAGCAATACTTTCTGAAGTACATCCTGGAACCTCCACCGTGCAGATCGGAGCCCGGAGCGTGCAACATGTTCTGTACGCAGCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS CCA 90 bp CTGCGTACAGAACATGTTGCACGCTCCGGGCTCCGATCTGCACGGTaGAGGTTCCAGGATGTACTTCAGAAAGTATTGCTTGGGACTTCC +
Preference number: 5 (lower is better)
Translates to: LRTEHVARSGLRSAR*RFQDVLQKVLLGTS
Trigger: GGAAGTCCCAAGCAATACTTTCTGAAGTACATCCTGGAACCTCCACCGTGCAGATCGGAGCCCGGAGCGTGCAACATGTTCTGTACGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR CAA 90 bp TCATCCTTGGTAAAGAGAGAGACAAGGATGGCAATATGGCAGAACCAGCAAGAAGTACTTCAGAAAGTATaGCTTGGGACTTCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: SSLVKRETRMAIWQNQQEVLQKV*LGTSKH
Trigger: GTGCTTGGAAGTCCCAAGCAATACTTTCTGAAGTAC...TTCTTGCTGGTTCTGCCATATTGCCATCCTTGTCTCTCTCTTTACCAAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS-3UTR CAA 90 bp TTGGATATTGTGAGACATGGACAAGCAGAATCATCATCTATTCAAACAGAGAAAGTACTGGGGCTTGGTTaGAGGTACACACTATCCCAC +
Preference number: 5 (lower is better)
Translates to: LDIVRHGQAESSSIQTEKVLGLG*RYTLSH
Trigger: GTGGGATAGTGTGTACCTCAAACCAAGCCCCAGTAC...TTTCTCTGTTTGAATAGATGATGATTCTGCTTGTCCATGTCTCACAATATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS GCA 72 bp CACGGTGGAGGTTCCAGGATGTACTTCAGAAAGTATTaGTTGGGACTTCCAAGCACTGGCTGTGGTGCTAGG +
Preference number: 6 (lower is better)
Translates to: HGGGSRMYFRKY*LGLPSTGCGAR
Trigger: CCTAGCACCACAGCCAGTGCTTGGAAGTCCCAAGCAATACTTTCTGAAGTACATCCTGGAACCTCCACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2
CDS CCA 72 bp GAACATGTTGCACGCTCCGGGCTCCGATCTGCACGGTaGAGGTTCCAGGATGTACTTCAGAAAGTATTGCTT +
Preference number: 6 (lower is better)
Translates to: EHVARSGLRSAR*RFQDVLQKVLL
Trigger: AAGCAATACTTTCTGAAGTACATCCTGGAACCTCCACCGTGCAGATCGGAGCCCGGAGCGTGCAACATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088260.2