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Pregenerated sensors for WFDC12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042845

Ensembl transcript IDs: ENSMUST00000051272.8

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTCCAAGATCAAGGTGCCCAGAGATCCAGTATCTGGAAAGGCCTaGTTTCTGGTCTTTGTATCTTCTTGCTGTGTCCTTCCACGGTGG +
Preference number: 1 (lower is better)
Translates to: ESKIKVPRDPVSGKA*FLVFVSSCCVLPRW
Trigger: CCACCGTGGAAGGACACAGCAAGAAGATACAAAGACCAGAAACCAGGCCTTTCCAGATACTGGATCTCTGGGCACCTTGATCTTGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR CCA 90 bp GGAGGTTGGGGAGTCCAAGATCAAGGTGCCCAGAGATCCAGTATCTaGAAAGGCCTGGTTTCTGGTCTTTGTATCTTCTTGCTGTGTCCT +
Preference number: 1 (lower is better)
Translates to: GGWGVQDQGAQRSSI*KGLVSGLCIFLLCP
Trigger: AGGACACAGCAAGAAGATACAAAGACCAGAAACCAGGCCTTTCCAGATACTGGATCTCTGGGCACCTTGATCTTGGACTCCCCAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR GCA 90 bp ATTTATTTCTCAGAGTTCTGGAGGTTGGGGAGTCCAAGATCAAGGTaGCCAGAGATCCAGTATCTGGAAAGGCCTGGTTTCTGGTCTTTG +
Preference number: 1 (lower is better)
Translates to: IYFSEFWRLGSPRSR*PEIQYLERPGFWSL
Trigger: CAAAGACCAGAAACCAGGCCTTTCCAGATACTGGATCTCTGGGCACCTTGATCTTGGACTCCCCAACCTCCAGAACTCTGAGAAATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR CAA 90 bp AGGTGCCCAGAGATCCAGTATCTGGAAAGGCCTGGTTTCTGGTCTTaGTATCTTCTTGCTGTGTCCTTCCACGGTGGAAGCAGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RCPEIQYLERPGFWS*YLLAVSFHGGSSPL
Trigger: CAGAGGACTGCTTCCACCGTGGAAGGACACAGCAAGAAGATACAAAGACCAGAAACCAGGCCTTTCCAGATACTGGATCTCTGGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR CAA 90 bp ACTGAATGGCCTATAAACAACATTTATTTCTCAGAGTTCTGGAGGTaGGGGAGTCCAAGATCAAGGTGCCCAGAGATCCAGTATCTGGAA +
Preference number: 2 (lower is better)
Translates to: TEWPINNIYFSEFWR*GSPRSRCPEIQYLE
Trigger: TTCCAGATACTGGATCTCTGGGCACCTTGATCTTGGACTCCCCAACCTCCAGAACTCTGAGAAATAAATGTTGTTTATAGGCCATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR GCA 72 bp TCAGAGTTCTGGAGGTTGGGGAGTCCAAGATCAAGGTaGCCAGAGATCCAGTATCTGGAAAGGCCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: SEFWRLGSPRSR*PEIQYLERPGF
Trigger: GAAACCAGGCCTTTCCAGATACTGGATCTCTGGGCACCTTGATCTTGGACTCCCCAACCTCCAGAACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR GCA 72 bp TCTGGAAAGGCCTGGTTTCTGGTCTTTGTATCTTCTTaGTGTGTCCTTCCACGGTGGAAGCAGTCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: SGKAWFLVFVSS*CVLPRWKQSSE
Trigger: CTCAGAGGACTGCTTCCACCGTGGAAGGACACAGCAAGAAGATACAAAGACCAGAAACCAGGCCTTTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR CCA 72 bp TGCCCAGAGATCCAGTATCTGGAAAGGCCTGGTTTCTaGTCTTTGTATCTTCTTGCTGTGTCCTTCCACGGT +
Preference number: 3 (lower is better)
Translates to: CPEIQYLERPGF*SLYLLAVSFHG
Trigger: ACCGTGGAAGGACACAGCAAGAAGATACAAAGACCAGAAACCAGGCCTTTCCAGATACTGGATCTCTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS-3UTR TCA 90 bp TCTTTGTATCTTCTTGCTGTGTCCTTCCACGGTGGAAGCAGTCCTCTGAGGCCACCGGCAGCACGCATTTaGAGCCACATTGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLYLLAVSFHGGSSPLRPPAARI*SHIARS
Trigger: GCTTCTGGCAATGTGGCTTCAAATGCGTGCTGCCGG...TGGCCTCAGAGGACTGCTTCCACCGTGGAAGGACACAGCAAGAAGATACAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS-3UTR TCA 90 bp TCAAGGTGCCCAGAGATCCAGTATCTGGAAAGGCCTGGTTTCTGGTCTTTGTATGGGGATCATCTTGCCTaGTGCAGCGGACGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: SRCPEIQYLERPGFWSLYGDHLA*CSGRSR
Trigger: CCGACTACGTCCGCTGCATCAGGCAAGATGATCCCC...ATACAAAGACCAGAAACCAGGCCTTTCCAGATACTGGATCTCTGGGCACCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS-3UTR TCA 90 bp TTCTCAGAGTTCTGGAGGTTGGGGAGTCCAAGATCAAGGTGCCCAGAGATCCAGAAGCAGCATATCTCCTaGTCTCCACAGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: FSEFWRLGSPRSRCPEIQKQHIS*SPQSLS
Trigger: TGACAATGACTGTGGAGATCAGGAGATATGCTGCTT...CTGGATCTCTGGGCACCTTGATCTTGGACTCCCCAACCTCCAGAACTCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS-3UTR GCA 90 bp TTCTCAGAGTTCTGGAGGTTGGGGAGTCCAAGATCAAGGTGCCCAGAGATCCAGCATTTGAAGCCACATTaGCAGAAGCAGCATATCTCC +
Preference number: 4 (lower is better)
Translates to: FSEFWRLGSPRSRCPEIQHLKPH*QKQHIS
Trigger: GGAGATATGCTGCTTCTGGCAATGTGGCTTCAAATG...CTGGATCTCTGGGCACCTTGATCTTGGACTCCCCAACCTCCAGAACTCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
3UTR CAA 72 bp GAGATCCAGTATCTGGAAAGGCCTGGTTTCTGGTCTTaGTATCTTCTTGCTGTGTCCTTCCACGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: EIQYLERPGFWS*YLLAVSFHGGS
Trigger: GCTTCCACCGTGGAAGGACACAGCAAGAAGATACAAAGACCAGAAACCAGGCCTTTCCAGATACTGGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS TCA 90 bp GAGGGATCTGTTCTTCACTGTTGTCTTTCACCGGCAGCACGCATTTaGAGCCACATTGCCAGAAGCAGCATATCTCCTGATCTCCACAGT +
Preference number: 5 (lower is better)
Translates to: EGSVLHCCLSPAARI*SHIARSSISPDLHS
Trigger: ACTGTGGAGATCAGGAGATATGCTGCTTCTGGCAATGTGGCTTCAAATGCGTGCTGCCGGTGAAAGACAACAGTGAAGAACAGATCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS-3UTR CAA 90 bp ATAAACAACATTTATTTCTCAGAGTTCTGGAGGTTGGGGAGTCCAAGATCAAGGGCATTTGAAGCCACATaGCCAGAAGCAGCATATCTC +
Preference number: 5 (lower is better)
Translates to: INNIYFSEFWRLGSPRSRAFEAT*PEAAYL
Trigger: GAGATATGCTGCTTCTGGCAATGTGGCTTCAAATGC...CCTTGATCTTGGACTCCCCAACCTCCAGAACTCTGAGAAATAAATGTTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS CAA 72 bp TCCACAGTCATTGTCACTGTAACACTGGGGATCATCTaGCCTGATGCAGCGGACGTAGTCGGGCGGGCAAAC +
Preference number: 6 (lower is better)
Translates to: STVIVTVTLGII*PDAADVVGRAN
Trigger: GTTTGCCCGCCCGACTACGTCCGCTGCATCAGGCAAGATGATCCCCAGTGTTACAGTGACAATGACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS TCA 72 bp AGTCATTGTCACTGTAACACTGGGGATCATCTTGCCTaGTGCAGCGGACGTAGTCGGGCGGGCAAACTCTTT +
Preference number: 6 (lower is better)
Translates to: SHCHCNTGDHLA*CSGRSRAGKLF
Trigger: AAAGAGTTTGCCCGCCCGACTACGTCCGCTGCATCAGGCAAGATGATCCCCAGTGTTACAGTGACAATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS CAA 72 bp GTTGTCTTTCACCGGCAGCACGCATTTGAAGCCACATaGCCAGAAGCAGCATATCTCCTGATCTCCACAGTC +
Preference number: 6 (lower is better)
Translates to: VVFHRQHAFEAT*PEAAYLLISTV
Trigger: GACTGTGGAGATCAGGAGATATGCTGCTTCTGGCAATGTGGCTTCAAATGCGTGCTGCCGGTGAAAGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8
CDS TCA 72 bp GTTCTTCACTGTTGTCTTTCACCGGCAGCACGCATTTaGAGCCACATTGCCAGAAGCAGCATATCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: VLHCCLSPAARI*SHIARSSISPD
Trigger: ATCAGGAGATATGCTGCTTCTGGCAATGTGGCTTCAAATGCGTGCTGCCGGTGAAAGACAACAGTGAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051272.8