Pregenerated sensors for WFDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023336Ensembl transcript IDs: ENSMUST00000024107.7, ENSMUST00000212901.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCAAGTGACCACACCAGGCTGGGCCACTCTGGGCTTGGGAGTCTaGAGTCCCATTTCCCAGGAGCTCTTGAGTGCTGTTCTGTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: HQVTTPGWATLGLGV*SPISQELLSAVLWN Trigger: ATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGACTTCAGACTCCCAAGCCCAGAGTGGCCCAGCCTGGTGTGGTCACTTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR GCA 90 bp | TCTGGGCTTGGGAGTCTGAAGTCCCATTTCCCAGGAGCTCTTGAGTaGTGTTCTGTGGAATGGAGTGTGACATCTAGGGTCATTCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: SGLGSLKSHFPGALE*CSVEWSVTSRVILW Trigger: CCAAAGAATGACCCTAGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGACTTCAGACTCCCAAGCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR CCA 90 bp | CTGAAGTCCCATTTCCCAGGAGCTCTTGAGTGCTGTTCTGTGGAATaGAGTGTGACATCTAGGGTCATTCTTTGGCTGTTTCCAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: LKSHFPGALECCSVE*SVTSRVILWLFPRL Trigger: AAGCCTTGGAAACAGCCAAAGAATGACCCTAGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGACTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR GCA 90 bp | TTGGGGAACATTAGGGATGAATATATGCCTTCCGCAGGCAAAATCTaGCAAAGTCACCTAGAAGCTGCAGGTTCACATGACAAGGATGCT | + |
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Preference number: 1 (lower is better) Translates to: LGNIRDEYMPSAGKI*QSHLEAAGSHDKDA Trigger: AGCATCCTTGTCATGTGAACCTGCAGCTTCTAGGTGACTTTGGCAGATTTTGCCTGCGGAAGGCATATATTCATCCCTAATGTTCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR CCA 90 bp | CCTGATAAAGTAGCTTACTTCTGCTACACGGTGGGCAGATTTATTTaGGGAACATTAGGGATGAATATATGCCTTCCGCAGGCAAAATCT | + |
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Preference number: 1 (lower is better) Translates to: PDKVAYFCYTVGRFI*GTLGMNICLPQAKS Trigger: AGATTTTGCCTGCGGAAGGCATATATTCATCCCTAATGTTCCCCAAATAAATCTGCCCACCGTGTAGCAGAAGTAAGCTACTTTATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR TCA 90 bp | CTGTGCTTAAATATACTTAAAACAATCTACTTGGGGTTAGACTCCTaGTGTTTGAGCCAACACCAGCTACTTAGCCTTGTTGAACTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LCLNILKTIYLGLDS*CLSQHQLLSLVELN Trigger: GTTCAGTTCAACAAGGCTAAGTAGCTGGTGTTGGCTCAAACATCAGGAGTCTAACCCCAAGTAGATTGTTTTAAGTATATTTAAGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGAGCAGGGACCCAGGGCTGGTTAGGAGCTTCCACCAAGTGACCACACCACTGGGCTTGGGAGTCTaGAGTCCCATTTCCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: MLSRDPGLVRSFHQVTTPLGLGV*SPISQE Trigger: CTCCTGGGAAATGGGACTTCAGACTCCCAAGCCCAG...TGGTGTGGTCACTTGGTGGAAGCTCCTAACCAGCCCTGGGTCCCTGCTCAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR-3UTR CCA 90 bp | TATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAAACAGCAGGGACCCAGGGCTaGTTAGGAGCTTCCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: YHQESFHRTVLCLNILKTAGTQG*LGASTK Trigger: CTTGGTGGAAGCTCCTAACCAGCCCTGGGTCCCTGC...TGTTTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGATAAAGTAGCTTACTTCTGCTACACGGTGGGCAGATTTATTTGGGGAACATCTAGGGTCATTCTTTaGCTGTTTCCAAGGCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: PDKVAYFCYTVGRFIWGTSRVIL*LFPRLS Trigger: GCTAAGCCTTGGAAACAGCCAAAGAATGACCCTAGA...TGTTCCCCAAATAAATCTGCCCACCGTGTAGCAGAAGTAAGCTACTTTATCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR-3UTR GCA 90 bp | TATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAAACATCCGCAGGCAAAATCTaGCAAAGTCACCTAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: YHQESFHRTVLCLNILKTSAGKI*QSHLEA Trigger: AGCTTCTAGGTGACTTTGGCAGATTTTGCCTGCGGA...TGTTTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR CAA 90 bp | CATCATGACAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTaGTTCTCTCTAGCTCAGCCCTGGTCTTTTGAAATGTATTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: HHDRSRLYFSNLIAI*FSLAQPWSFEMYSV Trigger: GACTGAATACATTTCAAAAGACCAGGGCTGAGCTAGAGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTGTCATGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| 3UTR-3UTR TCA 90 bp | CATCATGACAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTTCAGCCCTGGTCTTTTaGAATGTATTCAGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: HHDRSRLYFSNLIAILFSSALVF*NVFSHT Trigger: TGTGTGACTGAATACATTTCAAAAGACCAGGGCTGA...AGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTGTCATGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| 3UTR-3UTR CCA 90 bp | TATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAAACAGTGGGCAGATTTATTTaGGGAACATTAGGGATGAAT | + |
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Preference number: 2 (lower is better) Translates to: YHQESFHRTVLCLNILKTVGRFI*GTLGMN Trigger: ATTCATCCCTAATGTTCCCCAAATAAATCTGCCCAC...TGTTTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR TCA 72 bp | ACCACACCAGGCTGGGCCACTCTGGGCTTGGGAGTCTaGAGTCCCATTTCCCAGGAGCTCTTGAGTGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: TTPGWATLGLGV*SPISQELLSAV Trigger: AACAGCACTCAAGAGCTCCTGGGAAATGGGACTTCAGACTCCCAAGCCCAGAGTGGCCCAGCCTGGTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR GCA 72 bp | GGGAGTCTGAAGTCCCATTTCCCAGGAGCTCTTGAGTaGTGTTCTGTGGAATGGAGTGTGACATCTAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: GSLKSHFPGALE*CSVEWSVTSRV Trigger: GACCCTAGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGACTTCAGACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR-3UTR CAA 90 bp | GACTCTCTGTGGCTCACGCCTGATAAAGTAGCTTACTTCTGCTACACGGTGGGCATTTCCCAGGAGCTCTaGAGTGCTGTTCTGTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: DSLWLTPDKVAYFCYTVGISQEL*SAVLWN Trigger: ATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAAT...GCCCACCGTGTAGCAGAAGTAAGCTACTTTATCAGGCGTGAGCCACAGAGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR TCA 72 bp | CAGGAGCTCTTGAGTGCTGTTCTGTGGAATGGAGTGTaGCATCTAGGGTCATTCTTTGGCTGTTTCCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: QELLSAVLWNGV*HLGSFFGCFQG Trigger: GCCTTGGAAACAGCCAAAGAATGACCCTAGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR CCA 72 bp | ACTACCGTCTTGCCTCTCAAGGATCACGACTCTCTGTaGCTCACGCCTGATAAAGTAGCTTACTTCTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: TTVLPLKDHDSL*LTPDKVAYFCY Trigger: GTAGCAGAAGTAAGCTACTTTATCAGGCGTGAGCCACAGAGAGTCGTGATCCTTGAGAGGCAAGACGGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR CCA 72 bp | CATTTCCCAGGAGCTCTTGAGTGCTGTTCTGTGGAATaGAGTGTGACATCTAGGGTCATTCTTTGGCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: HFPGALECCSVE*SVTSRVILWLF Trigger: AAACAGCCAAAGAATGACCCTAGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR GCA 72 bp | ATTAGGGATGAATATATGCCTTCCGCAGGCAAAATCTaGCAAAGTCACCTAGAAGCTGCAGGTTCACATGAC | + |
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Preference number: 3 (lower is better) Translates to: IRDEYMPSAGKI*QSHLEAAGSHD Trigger: GTCATGTGAACCTGCAGCTTCTAGGTGACTTTGGCAGATTTTGCCTGCGGAAGGCATATATTCATCCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR CCA 72 bp | GTAGCTTACTTCTGCTACACGGTGGGCAGATTTATTTaGGGAACATTAGGGATGAATATATGCCTTCCGCAG | + |
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Preference number: 3 (lower is better) Translates to: VAYFCYTVGRFI*GTLGMNICLPQ Trigger: CTGCGGAAGGCATATATTCATCCCTAATGTTCCCCAAATAAATCTGCCCACCGTGTAGCAGAAGTAAGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| 3UTR TCA 72 bp | AATATACTTAAAACAATCTACTTGGGGTTAGACTCCTaGTGTTTGAGCCAACACCAGCTACTTAGCCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: NILKTIYLGLDS*CLSQHQLLSLV Trigger: AACAAGGCTAAGTAGCTGGTGTTGGCTCAAACATCAGGAGTCTAACCCCAAGTAGATTGTTTTAAGTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR GCA 90 bp | CCAAGTGACCACACCAGGCTGGGCCACTCTGGGCTTGGGAGTCTGAAGTCCCATGCATTGCCTCCCAAGTaGCCTGGGCAGAACTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PSDHTRLGHSGLGSLKSHALPPK*PGQNWS Trigger: GCTCCAGTTCTGCCCAGGGCACTTGGGAGGCAATGC...ATGGGACTTCAGACTCCCAAGCCCAGAGTGGCCCAGCCTGGTGTGGTCACTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | ATGCTGAGCAGGGACCCAGGGCTGGTTAGGAGCTTCCACCAAGTGACCACACCAGCCACCCAGCCATCGTaGTTTGGGCTGCACCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: MLSRDPGLVRSFHQVTTPATQPS*FGLHQP Trigger: TGGCTGGTGCAGCCCAAACCACGATGGCTGGGTGGC...TGGTGTGGTCACTTGGTGGAAGCTCCTAACCAGCCCTGGGTCCCTGCTCAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR GCA 90 bp | CCAAGTGACCACACCAGGCTGGGCCACTCTGGGCTTGGGAGTCTGAAGTCCCATTCCCTTCCCAGGCTCTaGCACATTCTTGGAGTCACC | + |
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Preference number: 4 (lower is better) Translates to: PSDHTRLGHSGLGSLKSHSLPRL*HILGVT Trigger: GGTGACTCCAAGAATGTGGCAGAGCCTGGGAAGGGA...ATGGGACTTCAGACTCCCAAGCCCAGAGTGGCCCAGCCTGGTGTGGTCACTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | TCCCATTTCCCAGGAGCTCTTGAGTGCTGTTCTGTGGAATGGAGTGTGACATCTGGGCAGCGGTCTGCATaGGGCTGCCGGGAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SHFPGALECCSVEWSVTSGQRSA*GCREPV Trigger: GACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCC...AGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTGACCACACCAGGCTGGGCCACTCTGGGCTTGGGAGTCTGAAGTCCCATCACACTGTCCATGGTTaGGTATGCCCTGGGCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: PSDHTRLGHSGLGSLKSHHTVHG*VCPGLR Trigger: ACGAAGCCCAGGGCATACCCAACCATGGACAGTGTG...ATGGGACTTCAGACTCCCAAGCCCAGAGTGGCCCAGCCTGGTGTGGTCACTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | GCTCAGCCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTCAGCCTGGCAGCGTGTaGCCTGACAGGCACCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQPWSFEMYSVTHMPSPLQPGSV*PDRHPG Trigger: CCCCGGGTGCCTGTCAGGCCACACGCTGCCAGGCTG...AAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR GCA 90 bp | GACTCTCTGTGGCTCACGCCTGATAAAGTAGCTTACTTCTGCTACACGGTGGGCACAGAGGAGTGGCTCTaGCCCATCCTCAGTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: DSLWLTPDKVAYFCYTVGTEEWL*PILSGA Trigger: AGCACCACTGAGGATGGGGCAGAGCCACTCCTCTGT...GCCCACCGTGTAGCAGAAGTAAGCTACTTTATCAGGCGTGAGCCACAGAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | TCCCATTTCCCAGGAGCTCTTGAGTGCTGTTCTGTGGAATGGAGTGTGACATCTGCCTCCCAAGTGCCCTaGGCAGAACTGGAGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SHFPGALECCSVEWSVTSASQVP*AELEPS Trigger: ACTGGGCTCCAGTTCTGCCCAGGGCACTTGGGAGGC...AGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR GCA 90 bp | AGTCACCTAGAAGCTGCAGGTTCACATGACAAGGATGCTGAGCAGGGACCCAGGCATCGTGGTTTGGGCTaGACCAGCCAGTCTAGAACT | + |
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Preference number: 4 (lower is better) Translates to: SHLEAAGSHDKDAEQGPRHRGLG*TSQSRT Trigger: AGTTCTAGACTGGCTGGTGCAGCCCAAACCACGATG...CCTGGGTCCCTGCTCAGCATCCTTGTCATGTGAACCTGCAGCTTCTAGGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTGGGCAGCGGTCTGCATaGGGCTGCCGGGAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PWSFEMYSVTHMPSPLSCGQRSA*GCREPV Trigger: GACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCC...ACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR GCA 90 bp | CCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTCCTGGCCGGCAGCATTaGCTCCCAAGTGCCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PWSFEMYSVTHMPSPLSCPGRQH*LPSALG Trigger: GCCCAGGGCACTTGGGAGGCAATGCTGCCGGCCAGG...ACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTGTCTTCTGGCAGCGTGTGGCCTaGCAGGCACCCGGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SFEMYSVTHMPSPLSCVFWQRVA*QAPGGS Trigger: ACTGCCCCCGGGTGCCTGTCAGGCCACACGCTGCCA...GAAGACACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CCA 90 bp | CCTGATAAAGTAGCTTACTTCTGCTACACGGTGGGCAGATTTATTTGGGGAACACAGTGTCCTTGGCGGTaGTGGGCAGCGGTCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: PDKVAYFCYTVGRFIWGTQCPWR*WAAVCM Trigger: CATGCAGACCGCTGCCCACCACCGCCAAGGACACTG...TGTTCCCCAAATAAATCTGCCCACCGTGTAGCAGAAGTAAGCTACTTTATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | TCCCATTTCCCAGGAGCTCTTGAGTGCTGTTCTGTGGAATGGAGTGTGACATCTCTGCCCCATCCTCAGTaGTGCTGCAAGTCTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SHFPGALECCSVEWSVTSLPHPQ*CCKSLL Trigger: AAGCAGAGACTTGCAGCACCACTGAGGATGGGGCAG...AGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | GACTCTCTGTGGCTCACGCCTGATAAAGTAGCTTACTTCTGCTACACGGTGGGCTTAACACACTGTCCATaGTTGGGTATGCCCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: DSLWLTPDKVAYFCYTVGLTHCP*LGMPWA Trigger: AGCCCAGGGCATACCCAACCATGGACAGTGTGTTAA...GCCCACCGTGTAGCAGAAGTAAGCTACTTTATCAGGCGTGAGCCACAGAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTGCCTCCCAAGTGCCCTaGGCAGAACTGGAGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PWSFEMYSVTHMPSPLSCASQVP*AELEPS Trigger: ACTGGGCTCCAGTTCTGCCCAGGGCACTTGGGAGGC...ACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR TCA 90 bp | AATTATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAATGGCAGCGTGTGGCCTaGCAGGCACCCGGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: NYHQESFHRTVLCLNILKWQRVA*QAPGGS Trigger: ACTGCCCCCGGGTGCCTGTCAGGCCACACGCTGCCA...TTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR GCA 90 bp | TATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAAACACCTGGCCGGCAGCATTaGCTCCCAAGTGCCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: YHQESFHRTVLCLNILKTPGRQH*LPSALG Trigger: GCCCAGGGCACTTGGGAGGCAATGCTGCCGGCCAGG...TGTTTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR GCA 90 bp | AATTATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAATGGTGGGCAGCGGTCTaGATGGGGCTGCCGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NYHQESFHRTVLCLNILKWWAAV*MGLPGA Trigger: GGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCA...TTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | AATTATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAACAGCCTGGCAGCGTGTaGCCTGACAGGCACCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: NYHQESFHRTVLCLNILKQPGSV*PDRHPG Trigger: CCCCGGGTGCCTGTCAGGCCACACGCTGCCAGGCTG...TTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR GCA 90 bp | CCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTACAGAGGAGTGGCTCTaGCCCATCCTCAGTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PWSFEMYSVTHMPSPLSCTEEWL*PILSGA Trigger: AGCACCACTGAGGATGGGGCAGAGCCACTCCTCTGT...ACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CCA 90 bp | CCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTCCAGCCATCGTGGTTTaGGCTGCACCAGCCAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: PWSFEMYSVTHMPSPLSCPAIVV*AAPASL Trigger: TAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGG...ACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR GCA 90 bp | TCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTGTCTTCGCATTGCCTCCCAAGTaGCCTGGGCAGAACTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SFEMYSVTHMPSPLSCVFALPPK*PGQNWS Trigger: GCTCCAGTTCTGCCCAGGGCACTTGGGAGGCAATGC...GAAGACACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CCA 90 bp | CATCATGACAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTGCCACCCAGCCATCGTaGTTTGGGCTGCACCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HHDRSRLYFSNLIAILFSATQPS*FGLHQP Trigger: TGGCTGGTGCAGCCCAAACCACGATGGCTGGGTGGC...AGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTGTCATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CCA 90 bp | CCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTCTGCCCCATCCTCAGTaGTGCTGCAAGTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PWSFEMYSVTHMPSPLSCLPHPQ*CCKSLL Trigger: AAGCAGAGACTTGCAGCACCACTGAGGATGGGGCAG...ACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CCA 90 bp | CCCTGGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTCACACTGTCCATGGTTaGGTATGCCCTGGGCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PWSFEMYSVTHMPSPLSCHTVHG*VCPGLR Trigger: ACGAAGCCCAGGGCATACCCAACCATGGACAGTGTG...ACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR TCA 90 bp | CAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTCTAGCTCAATGGCACTCATAGCCTaGGGGACAGAGGAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVSTLFLKPNCHFVLSSSMALIA*GTEEWL Trigger: GAGCCACTCCTCTGTCCCTCAGGCTATGAGTGCCAT...TGAGCTAGAGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR TCA 90 bp | TATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAAACAATGGCACTCATAGCCTaGGGGACAGAGGAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHQESFHRTVLCLNILKTMALIA*GTEEWL Trigger: GAGCCACTCCTCTGTCCCTCAGGCTATGAGTGCCAT...TGTTTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR TCA 90 bp | GACAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTCTAGCTCCTGGATATTCCTTGTaGAGCCTCTGTCGCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DRSRLYFSNLIAILFSLAPGYSL*SLCRRT Trigger: GGTCCTGCGACAGAGGCTTCACAAGGAATATCCAGG...AGCTAGAGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR GCA 90 bp | CAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTCTAGCTCATCTGCTTGCCGGCGTTaGTTAACACACTGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QVSTLFLKPNCHFVLSSSSACRR*LTHCPW Trigger: CCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGA...TGAGCTAGAGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CCA 90 bp | AATTATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAACCAGCCATCGTGGTTTaGGCTGCACCAGCCAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NYHQESFHRTVLCLNILKPAIVV*AAPASL Trigger: TAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGG...TTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | GGTCTTTTGAAATGTATTCAGTCACACATATGCCTTCTCCCCTTTCTTGTGTCTTTAACACACTGTCCATaGTTGGGTATGCCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLKCIQSHICLLPFLVSLTHCP*LGMPWA Trigger: AGCCCAGGGCATACCCAACCATGGACAGTGTGTTAA...AGACACAAGAAAGGGGAGAAGGCATATGTGTGACTGAATACATTTCAAAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| 3UTR CAA 72 bp | AGTAGCTTACTTCTGCTACACGGTGGGCAGATTTATTaGGGGAACATTAGGGATGAATATATGCCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLLLLHGGQIY*GNIRDEYMPSA Trigger: TGCGGAAGGCATATATTCATCCCTAATGTTCCCCAAATAAATCTGCCCACCGTGTAGCAGAAGTAAGCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR GCA 90 bp | CATCATGACAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTCATCGTGGTTTGGGCTaGACCAGCCAGTCTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HHDRSRLYFSNLIAILFSHRGLG*TSQSRT Trigger: AGTTCTAGACTGGCTGGTGCAGCCCAAACCACGATG...AGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTGTCATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR GCA 90 bp | AATTATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAATCTGCTTGCCGGCGTTaGTTAACACACTGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NYHQESFHRTVLCLNILKSACRR*LTHCPW Trigger: CCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGA...TTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CCA 90 bp | GACAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTCTAGCTCTTCTTCCTCTCACCTaGATATTCCTTGTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRSRLYFSNLIAILFSLALLPLT*IFLVKP Trigger: AGGCTTCACAAGGAATATCCAGGTGAGAGGAAGAAG...AGCTAGAGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
||
| 3UTR CAA 72 bp | AGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTaGTTCTCTCTAGCTCAGCCCTGGTCTTTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RSRLYFSNLIAI*FSLAQPWSFEM Trigger: CATTTCAAAAGACCAGGGCTGAGCTAGAGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CCA 90 bp | AATTATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAAGCTCTGCCACATTCTTaGAGTCACCTTCTGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: NYHQESFHRTVLCLNILKALPHS*SHLLDI Trigger: AATATCCAGAAGGTGACTCCAAGAATGTGGCAGAGC...TTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
||
| CDS CCA 90 bp | GCAGCGTGTGGCCTGACAGGCACCCGGGGGCAGTGTCCTTGGCGGTaGTGGGCAGCGGTCTGCATGGGGCTGCCGGGAGCCTGTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AACGLTGTRGQCPWR*WAAVCMGLPGACRC Trigger: GCAGCGACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGCCTGTCAGGCCACACGCTGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 90 bp | AGCCTGGCAGCGTGTGGCCTGACAGGCACCCGGGGGCAGTGTCCTTaGCGGTGGTGGGCAGCGGTCTGCATGGGGCTGCCGGGAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLAACGLTGTRGQCP*RWWAAVCMGLPGAC Trigger: ACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGCCTGTCAGGCCACACGCTGCCAGGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
||
| CDS GCA 90 bp | CGGTGGTGGGCAGCGGTCTGCATGGGGCTGCCGGGAGCCTGTCGCTaGAACCTCTTCAGCTCGGGACTTCTCGGCCAGCCTGGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RWWAAVCMGLPGACR*NLFSSGLLGQPGRQ Trigger: CTGCCGGCCAGGCTGGCCGAGAAGTCCCGAGCTGAAGAGGTTGCAGCGACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 90 bp | GCACCCGGGGGCAGTGTCCTTGGCGGTGGTGGGCAGCGGTCTGCATaGGGCTGCCGGGAGCCTGTCGCTGCAACCTCTTCAGCTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: APGGSVLGGGGQRSA*GCREPVAATSSARD Trigger: GTCCCGAGCTGAAGAGGTTGCAGCGACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS GCA 90 bp | ACAGGCACCCGGGGGCAGTGTCCTTGGCGGTGGTGGGCAGCGGTCTaGATGGGGCTGCCGGGAGCCTGTCGCTGCAACCTCTTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TGTRGQCPWRWWAAV*MGLPGACRCNLFSS Trigger: CGAGCTGAAGAGGTTGCAGCGACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGCCTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS GCA 90 bp | CCGTCCAGCAGCCAGCCGTTGCCACCCAGCCATCGTGGTTTGGGCTaGACCAGCCAGTCTAGAACTGGCGGAGGTGGCACCGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSSQPLPPSHRGLG*TSQSRTGGGGTASR Trigger: CCTGGAGGCGGTGCCACCTCCGCCAGTTCTAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGGGTGGCAACGGCTGGCTGCTGGACGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 90 bp | CAGGACCGTCCAGCAGCCAGCCGTTGCCACCCAGCCATCGTGGTTTaGGCTGCACCAGCCAGTCTAGAACTGGCGGAGGTGGCACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QDRPAASRCHPAIVV*AAPASLELAEVAPP Trigger: AGGCGGTGCCACCTCCGCCAGTTCTAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGGGTGGCAACGGCTGGCTGCTGGACGGTCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 90 bp | CAGGCAGGCATAGGCACAGCCATTGTAGCAGCAGCGCCTGTGTCGTaGGCACTCAGAGTCAGCCTGGCAGCGTGTGGCCTGACAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QAGIGTAIVAAAPVS*ALRVSLAACGLTGT Trigger: GGTGCCTGTCAGGCCACACGCTGCCAGGCTGACTCTGAGTGCCCACGACACAGGCGCTGCTGCTACAATGGCTGTGCCTATGCCTGCCTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS-3UTR CAA 90 bp | GACTCTCTGTGGCTCACGCCTGATAAAGTAGCTTACTTCTGCTACACGGTGGGCCCGGGGGCAGTGTCCTaGGCGGTGGTGGGCAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSLWLTPDKVAYFCYTVGPGAVS*AVVGSG Trigger: ACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGG...GCCCACCGTGTAGCAGAAGTAAGCTACTTTATCAGGCGTGAGCCACAGAGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS CCA 90 bp | AGGACCCGCCCTTCTGCTTGCCGGCGTTGCTTAACACACTGTCCATaGTTGGGTATGCCCTGGGCTTCGTCCCCTGGCTGCAGGATATGG | + |
|
Preference number: 5 (lower is better) Translates to: RTRPSACRRCLTHCP*LGMPWASSPGCRIW Trigger: CCATATCCTGCAGCCAGGGGACGAAGCCCAGGGCATACCCAACCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAAGGGCGGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS-3UTR CAA 90 bp | AGTCACCTAGAAGCTGCAGGTTCACATGACAAGGATGCTGAGCAGGGACCCAGGTCCAGCAGCCAGCCGTaGCCACCCAGCCATCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHLEAAGSHDKDAEQGPRSSSQP*PPSHRG Trigger: ACCACGATGGCTGGGTGGCAACGGCTGGCTGCTGGA...CCTGGGTCCCTGCTCAGCATCCTTGTCATGTGAACCTGCAGCTTCTAGGTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS TCA 90 bp | CCAGGCTCTGCCACATTCTTGGAGTCACCTTCTGGATATTCCTTGTaGAGCCTCTGTCGCAGGACCCGCCCTTCTGCTTGCCGGCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSATFLESPSGYSL*SLCRRTRPSACRRC Trigger: GCAACGCCGGCAAGCAGAAGGGCGGGTCCTGCGACAGAGGCTTCACAAGGAATATCCAGAAGGTGACTCCAAGAATGTGGCAGAGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGCAGGGACCCAGGGCTGGTTAGGAGCTTCCACCAAGTGACCACACCAACACACTGTCCATGGTaGGGTATGCCCTGGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: MLSRDPGLVRSFHQVTTPTHCPW*GMPWAS Trigger: CGAAGCCCAGGGCATACCCAACCATGGACAGTGTGT...TGGTGTGGTCACTTGGTGGAAGCTCCTAACCAGCCCTGGGTCCCTGCTCAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS GCA 90 bp | CATAGCCTGAGGGACAGAGGAGTGGCTCTGCCCCATCCTCAGTGGTaGTGCAAGTCTCTGCTTGTAACACTTCCTCAGGACCGTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSLRDRGVALPHPQW*CKSLLVTLPQDRPA Trigger: TGCTGGACGGTCCTGAGGAAGTGTTACAAGCAGAGACTTGCAGCACCACTGAGGATGGGGCAGAGCCACTCCTCTGTCCCTCAGGCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS GCA 90 bp | ACCTGGATATTCCTTGTGAAGCCTCTGTCGCAGGACCCGCCCTTCTaGTTGCCGGCGTTGCTTAACACACTGTCCATGGTTGGGTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: TWIFLVKPLSQDPPF*LPALLNTLSMVGYA Trigger: GGCATACCCAACCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAAGGGCGGGTCCTGCGACAGAGGCTTCACAAGGAATATCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS CCA 90 bp | ACTCATAGCCTGAGGGACAGAGGAGTGGCTCTGCCCCATCCTCAGTaGTGCTGCAAGTCTCTGCTTGTAACACTTCCTCAGGACCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: THSLRDRGVALPHPQ*CCKSLLVTLPQDRP Trigger: TGGACGGTCCTGAGGAAGTGTTACAAGCAGAGACTTGCAGCACCACTGAGGATGGGGCAGAGCCACTCCTCTGTCCCTCAGGCTATGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 90 bp | CTGTTGTCCCTTCCCAGGCTCTGCCACATTCTTGGAGTCACCTTCTaGATATTCCTTGTGAAGCCTCTGTCGCAGGACCCGCCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLPRLCHILGVTF*IFLVKPLSQDPPFC Trigger: GCAGAAGGGCGGGTCCTGCGACAGAGGCTTCACAAGGAATATCCAGAAGGTGACTCCAAGAATGTGGCAGAGCCTGGGAAGGGACAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGCAGGGACCCAGGGCTGGTTAGGAGCTTCCACCAAGTGACCACACCATTCTGCTTGCCGGCGTaGCTTAACACACTGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: MLSRDPGLVRSFHQVTTPFCLPA*LNTLSM Trigger: CATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAA...TGGTGTGGTCACTTGGTGGAAGCTCCTAACCAGCCCTGGGTCCCTGCTCAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CAA 90 bp | ATTGCCATTTTGTTCTCTCTAGCTCAGCCCTGGTCTTTTGAAATGTATTCAGTCCCGGGGGCAGTGTCCTaGGCGGTGGTGGGCAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: IAILFSLAQPWSFEMYSVPGAVS*AVVGSG Trigger: ACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGG...GACTGAATACATTTCAAAAGACCAGGGCTGAGCTAGAGAGAACAAAATGGCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CAA 90 bp | CAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTCTAGCTCATCCAGCAGCCAGCCGTaGCCACCCAGCCATCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QVSTLFLKPNCHFVLSSSSSSQP*PPSHRG Trigger: ACCACGATGGCTGGGTGGCAACGGCTGGCTGCTGGA...TGAGCTAGAGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS-3UTR CAA 90 bp | TCCCATTTCCCAGGAGCTCTTGAGTGCTGTTCTGTGGAATGGAGTGTGACATCTGGCTCTGCCACATTCTaGGAGTCACCTTCTGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: SHFPGALECCSVEWSVTSGSATF*ESPSGY Trigger: ATATCCAGAAGGTGACTCCAAGAATGTGGCAGAGCC...AGATGTCACACTCCATTCCACAGAACAGCACTCAAGAGCTCCTGGGAAATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CAA 90 bp | TATCACCAGGAGAGTTTTCACCGAACTGTGCTGTGCTTAAATATACTTAAAACATGGAAAGTGCCTCTGTaGTCCCTTCCCAGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YHQESFHRTVLCLNILKTWKVPL*SLPRLC Trigger: GCAGAGCCTGGGAAGGGACAACAGAGGCACTTTCCA...TGTTTTAAGTATATTTAAGCACAGCACAGTTCGGTGAAAACTCTCCTGGTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS-3UTR CAA 90 bp | CATCATGACAGGTCTCGACTTTATTTCTCAAACCTAATTGCCATTTTGTTCTCTTTCTGCTTGCCGGCGTaGCTTAACACACTGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HHDRSRLYFSNLIAILFSFCLPA*LNTLSM Trigger: CATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAA...AGAGAACAAAATGGCAATTAGGTTTGAGAAATAAAGTCGAGACCTGTCATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS CCA 72 bp | GGCCTGACAGGCACCCGGGGGCAGTGTCCTTGGCGGTaGTGGGCAGCGGTCTGCATGGGGCTGCCGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLTGTRGQCPWR*WAAVCMGLPGA Trigger: GGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGCCTGTCAGGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 72 bp | GCGTGTGGCCTGACAGGCACCCGGGGGCAGTGTCCTTaGCGGTGGTGGGCAGCGGTCTGCATGGGGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ACGLTGTRGQCP*RWWAAVCMGLP Trigger: CGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGCCTGTCAGGCCACACGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CAA 90 bp | CAGCCTGGCAGCGTGTGGCCTGACAGGCACCCGGGGGCAGTGTCCTaGGCGGTGGTGGGCAGCGGTCTGCATGGGGCTGCCGGGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QPGSVWPDRHPGAVS*AVVGSGLHGAAGSL Trigger: CAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGCCTGTCAGGCCACACGCTGCCAGGCTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
||
| CDS GCA 72 bp | CGGGGGCAGTGTCCTTGGCGGTGGTGGGCAGCGGTCTaGATGGGGCTGCCGGGAGCCTGTCGCTGCAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGQCPWRWWAAV*MGLPGACRCNL Trigger: GAGGTTGCAGCGACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS TCA 72 bp | CGTGGGCACTCAGAGTCAGCCTGGCAGCGTGTGGCCTaGCAGGCACCCGGGGGCAGTGTCCTTGGCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGHSESAWQRVA*QAPGGSVLGGG Trigger: ACCACCGCCAAGGACACTGCCCCCGGGTGCCTGTCAGGCCACACGCTGCCAGGCTGACTCTGAGTGCCCACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS GCA 72 bp | AGCTCGGGACTTCTCGGCCAGCCTGGCCGGCAGCATTaGCTCCCAAGTGCCCTGGGCAGAACTGGAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSGLLGQPGRQH*LPSALGRTGAQ Trigger: CTGGGCTCCAGTTCTGCCCAGGGCACTTGGGAGGCAATGCTGCCGGCCAGGCTGGCCGAGAAGTCCCGAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
||
| CDS GCA 72 bp | GCAGCGGTCTGCATGGGGCTGCCGGGAGCCTGTCGCTaGAACCTCTTCAGCTCGGGACTTCTCGGCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAVCMGLPGACR*NLFSSGLLGQP Trigger: AGGCTGGCCGAGAAGTCCCGAGCTGAAGAGGTTGCAGCGACAGGCTCCCGGCAGCCCCATGCAGACCGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
||
| CDS CCA 72 bp | GGCAGTGTCCTTGGCGGTGGTGGGCAGCGGTCTGCATaGGGCTGCCGGGAGCCTGTCGCTGCAACCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSVLGGGGQRSA*GCREPVAATSS Trigger: TGAAGAGGTTGCAGCGACAGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
||
| CDS CCA 72 bp | TGTGTCGTGGGCACTCAGAGTCAGCCTGGCAGCGTGTaGCCTGACAGGCACCCGGGGGCAGTGTCCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CVVGTQSQPGSV*PDRHPGAVSLA Trigger: CGCCAAGGACACTGCCCCCGGGTGCCTGTCAGGCCACACGCTGCCAGGCTGACTCTGAGTGCCCACGACACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
||
| CDS CAA 72 bp | CAGCTCGGGACTTCTCGGCCAGCCTGGCCGGCAGCATaGCCTCCCAAGTGCCCTGGGCAGAACTGGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QLGTSRPAWPAA*PPKCPGQNWSP Trigger: TGGGCTCCAGTTCTGCCCAGGGCACTTGGGAGGCAATGCTGCCGGCCAGGCTGGCCGAGAAGTCCCGAGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 72 bp | CTGCAACCTCTTCAGCTCGGGACTTCTCGGCCAGCCTaGCCGGCAGCATTGCCTCCCAAGTGCCCTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LQPLQLGTSRPA*PAALPPKCPGQ Trigger: CTGCCCAGGGCACTTGGGAGGCAATGCTGCCGGCCAGGCTGGCCGAGAAGTCCCGAGCTGAAGAGGTTGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS GCA 72 bp | TCTCGGCCAGCCTGGCCGGCAGCATTGCCTCCCAAGTaGCCTGGGCAGAACTGGAGCCCAGTAGCAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SRPAWPAALPPK*PGQNWSPVATG Trigger: TCCTGTTGCTACTGGGCTCCAGTTCTGCCCAGGGCACTTGGGAGGCAATGCTGCCGGCCAGGCTGGCCGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS GCA 72 bp | AGCCAGCCGTTGCCACCCAGCCATCGTGGTTTGGGCTaGACCAGCCAGTCTAGAACTGGCGGAGGTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: SQPLPPSHRGLG*TSQSRTGGGGT Trigger: GGTGCCACCTCCGCCAGTTCTAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGGGTGGCAACGGCTGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 72 bp | CCAGCAGCCAGCCGTTGCCACCCAGCCATCGTGGTTTaGGCTGCACCAGCCAGTCTAGAACTGGCGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PAASRCHPAIVV*AAPASLELAEV Trigger: CACCTCCGCCAGTTCTAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGGGTGGCAACGGCTGGCTGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 72 bp | GCCAGCCTGGCCGGCAGCATTGCCTCCCAAGTGCCCTaGGCAGAACTGGAGCCCAGTAGCAACAGGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: ASLAGSIASQVP*AELEPSSNRKL Trigger: GAGTTTCCTGTTGCTACTGGGCTCCAGTTCTGCCCAGGGCACTTGGGAGGCAATGCTGCCGGCCAGGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 72 bp | ATAGGCACAGCCATTGTAGCAGCAGCGCCTGTGTCGTaGGCACTCAGAGTCAGCCTGGCAGCGTGTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: IGTAIVAAAPVS*ALRVSLAACGL Trigger: CAGGCCACACGCTGCCAGGCTGACTCTGAGTGCCCACGACACAGGCGCTGCTGCTACAATGGCTGTGCCTAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 72 bp | CCTTCTGCTTGCCGGCGTTGCTTAACACACTGTCCATaGTTGGGTATGCCCTGGGCTTCGTCCCCTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSACRRCLTHCP*LGMPWASSPGC Trigger: GCAGCCAGGGGACGAAGCCCAGGGCATACCCAACCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CAA 72 bp | CCTCTGTCGCAGGACCCGCCCTTCTGCTTGCCGGCGTaGCTTAACACACTGTCCATGGTTGGGTATGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLSQDPPFCLPA*LNTLSMVGYAL Trigger: CAGGGCATACCCAACCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAAGGGCGGGTCCTGCGACAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CAA 90 bp | GTCTCTGCTTGTAACACTTCCTCAGGACCGTCCAGCAGCCAGCCGTaGCCACCCAGCCATCGTGGTTTGGGCTGCACCAGCCAGTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: VSACNTSSGPSSSQP*PPSHRGLGCTSQSR Trigger: TCTAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGGGTGGCAACGGCTGGCTGCTGGACGGTCCTGAGGAAGTGTTACAAGCAGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CAA 90 bp | CTTGTGAAGCCTCTGTCGCAGGACCCGCCCTTCTGCTTGCCGGCGTaGCTTAACACACTGTCCATGGTTGGGTATGCCCTGGGCTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: LVKPLSQDPPFCLPA*LNTLSMVGYALGFV Trigger: GACGAAGCCCAGGGCATACCCAACCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAAGGGCGGGTCCTGCGACAGAGGCTTCACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS TCA 72 bp | AAGAGCGCCTTCTTCCTCTCACCTGGATATTCCTTGTaGAGCCTCTGTCGCAGGACCCGCCCTTCTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: KSAFFLSPGYSL*SLCRRTRPSAC Trigger: GCAAGCAGAAGGGCGGGTCCTGCGACAGAGGCTTCACAAGGAATATCCAGGTGAGAGGAAGAAGGCGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212901.2 |
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| CDS GCA 72 bp | AGGGACAGAGGAGTGGCTCTGCCCCATCCTCAGTGGTaGTGCAAGTCTCTGCTTGTAACACTTCCTCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: RDRGVALPHPQW*CKSLLVTLPQD Trigger: GTCCTGAGGAAGTGTTACAAGCAGAGACTTGCAGCACCACTGAGGATGGGGCAGAGCCACTCCTCTGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS CCA 72 bp | CTGAGGGACAGAGGAGTGGCTCTGCCCCATCCTCAGTaGTGCTGCAAGTCTCTGCTTGTAACACTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LRDRGVALPHPQ*CCKSLLVTLPQ Trigger: CTGAGGAAGTGTTACAAGCAGAGACTTGCAGCACCACTGAGGATGGGGCAGAGCCACTCCTCTGTCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024107.7 ENSMUST00000212901.2 |
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| CDS TCA 72 bp | GCCACATTCTTGGAGTCACCTTCTGGATATTCCTTGTaGAGCCTCTGTCGCAGGACCCGCCCTTCTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ATFLESPSGYSL*SLCRRTRPSAC Trigger: GCAAGCAGAAGGGCGGGTCCTGCGACAGAGGCTTCACAAGGAATATCCAGAAGGTGACTCCAAGAATGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS CCA 72 bp | CTTCCCAGGCTCTGCCACATTCTTGGAGTCACCTTCTaGATATTCCTTGTGAAGCCTCTGTCGCAGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: LPRLCHILGVTF*IFLVKPLSQDP Trigger: CGGGTCCTGCGACAGAGGCTTCACAAGGAATATCCAGAAGGTGACTCCAAGAATGTGGCAGAGCCTGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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| CDS GCA 72 bp | TTATGGAAAGTGCCTCTGTTGTCCCTTCCCAGGCTCTaGCACATTCTTGGAGTCACCTTCTGGATATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LWKVPLLSLPRL*HILGVTFWIFL Trigger: AAGGAATATCCAGAAGGTGACTCCAAGAATGTGGCAGAGCCTGGGAAGGGACAACAGAGGCACTTTCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024107.7 |
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