Pregenerated sensors for WEE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037159Ensembl transcript IDs: ENSMUST00000038907.9, ENSMUST00000141490.2, ENSMUST00000202464.4
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCAGTACTTACGATACACAAGACCGTTGCTAAGGAGAAACCCTaGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCT | + |
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Preference number: 1 (lower is better) Translates to: TPVLTIHKTVAKEKP*KLGDLTYRCHIRMA Trigger: AGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGGTCTTGTGTATCGTAAGTACTGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR GCA 90 bp | GTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATaGCACATCAGGATGGCTTTTGAGATCTTTGTACATTCAAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VAKEKPWKLGDLTYR*HIRMAFEIFVHSSW Trigger: CCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR TCA 90 bp | CATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTaGTTGGAGGAGCAGACAGATCTTGGAAAGCACTCTGAAATACAG | + |
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Preference number: 1 (lower is better) Translates to: HSESIVGKFLAQRSW*LEEQTDLGKHSEIQ Trigger: CTGTATTTCAGAGTGCTTTCCAAGATCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATaGCTTTTGAGATCTTTGTACATTCAAGCTGGTTCAGTTTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: NPGSSVILPIDATSG*LLRSLYIQAGSVLY Trigger: ATACAAAACTGAACCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CCA 90 bp | ATCTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTGGAAGCTaGCACTTAAAGCCATATTTTATCCCTTTTTATGTACAGGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: ILESTLKYRQHSLGS*HLKPYFIPFYVQGK Trigger: CTTTCCCTGTACATAAAAAGGGATAAAATATGGCTTTAAGTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CCA 90 bp | CAGACAGATCTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTaGAAGCTGGCACTTAAAGCCATATTTTATCCCTTTTTATGTACA | + |
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Preference number: 1 (lower is better) Translates to: QTDLGKHSEIQATFS*KLALKAIFYPFLCT Trigger: TGTACATAAAAAGGGATAAAATATGGCTTTAAGTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTGTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CAA 90 bp | AATTCCTTGCTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGATCTaGGAAAGCACTCTGAAATACAGGCAACATTCTCTTGGAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NSLLKGAGDWRSRQI*ESTLKYRQHSLGSW Trigger: CCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCTCTAGAAATACATCACTAGGGAAAAGAAGACTCCAGTACTTACGATACGCTAAGGAGAAACCCTaGAAGCTCGGTGATCTTACC | + |
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Preference number: 2 (lower is better) Translates to: SSSRNTSLGKRRLQYLRYAKEKP*KLGDLT Trigger: GGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGC...GTATCGTAAGTACTGGAGTCTTCTTTTCCCTAGTGATGTATTTCTAGAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR CCA 90 bp | GATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGCAGGCAACATTCTCTTaGAAGCTGGCACTTAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: DCFHSESIVGKFLAQRSWQATFS*KLALKA Trigger: GGCTTTAAGTGCCAGCTTCCAAGAGAATGTTGCCTG...CCAGCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR GCA 90 bp | TATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGAGATCTTACCTATAGATaGCACATCAGGATGGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: YSRQIPCSKELVIGGADRDLTYR*HIRMAF Trigger: AAAAGCCATCCTGATGTGGCATCTATAGGTAAGATC...TCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CAA 90 bp | GGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTaGAGATCTTTGTACATTCAAGCTGGTTCAGTTTTGTATCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GSSVILPIDATSGWL*RSLYIQAGSVLYPV Trigger: TACAGGATACAAAACTGAACCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR GCA 90 bp | CAGATCTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTGGAAGCTGGCACAAAGTAGCACATTTCTaGTTCTCCTTTCAGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: QILESTLKYRQHSLGSWHKVAHF*FSFQFR Trigger: TCTGAACTGAAAGGAGAAGCAGAAATGTGCTACTTT...GTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCGATGCCACATCAGGATaGCTTTTGAGATCTTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: RDCFHSESIVGKFLAQRSDATSG*LLRSLY Trigger: GTACAAAGATCTCAAAAGCCATCCTGATGTGGCATC...GCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCAGAGCCATGTTTTCTaGTTATTCATTAGGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KRLLPFRKYSRQIPCSKEQSHVF*LFIRSP Trigger: AGGACTCCTAATGAATAATCAGAAAACATGGCTCTG...CTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAAATACATCACTAGGGAAAAGAAGACTCCAGTACTTACGATACACAAGATTTGTACATTCAAGCTaGTTCAGTTTTGTATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRNTSLGKRRLQYLRYTRFVHSS*FSFVSC Trigger: ACAGGATACAAAACTGAACCAGCTTGAATGTACAAA...TCTTGTGTATCGTAAGTACTGGAGTCTTCTTTTCCCTAGTGATGTATTTCTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR TCA 72 bp | GTGATTGGAGGAGCAGACAGATCTTGGAAAGCACTCTaGAATACAGGCAACATTCTCTTGGAAGCTGGCACT | + |
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Preference number: 3 (lower is better) Translates to: VIGGADRSWKAL*NTGNILLEAGT Trigger: AGTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTGTCTGCTCCTCCAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CCA 72 bp | CTTACGATACACAAGACCGTTGCTAAGGAGAAACCCTaGAAGCTCGGTGATCTTACCTATAGATGCCACATC | + |
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Preference number: 3 (lower is better) Translates to: LTIHKTVAKEKP*KLGDLTYRCHI Trigger: GATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGGTCTTGTGTATCGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR TCA 72 bp | AGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTaGTTGGAGGAGCAGACAGATCTTGGAAAGCACTCT | + |
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Preference number: 3 (lower is better) Translates to: SIVGKFLAQRSW*LEEQTDLGKHS Trigger: AGAGTGCTTTCCAAGATCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR CAA 90 bp | TATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGATTTCAAAAGGCTGTGTaGTGTAGCAAAAGGCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: YSRQIPCSKELVIGGADRFQKAV*CSKRPE Trigger: TTCTGGCCTTTTGCTACACAACACAGCCTTTTGAAA...TCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR GCA 72 bp | GAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATaGCACATCAGGATGGCTTTTGAGATCTTTGTACAT | + |
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Preference number: 3 (lower is better) Translates to: EKPWKLGDLTYR*HIRMAFEIFVH Trigger: ATGTACAAAGATCTCAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CCA 72 bp | AGCTCGGTGATCTTACCTATAGATGCCACATCAGGATaGCTTTTGAGATCTTTGTACATTCAAGCTGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: SSVILPIDATSG*LLRSLYIQAGS Trigger: TGAACCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CCA 72 bp | CTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTaGAAGCTGGCACTTAAAGCCATATTTTATCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LGKHSEIQATFS*KLALKAIFYPF Trigger: AAAGGGATAAAATATGGCTTTAAGTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR-3UTR CAA 90 bp | TCTAGAAATACATCACTAGGGAAAAGAAGACTCCAGTACTTACGATACACAAGAACATCAGGATGGCTTTaGAGATCTTTGTACATTCAA | + |
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Preference number: 3 (lower is better) Translates to: SRNTSLGKRRLQYLRYTRTSGWL*RSLYIQ Trigger: TTGAATGTACAAAGATCTCAAAAGCCATCCTGATGT...TCTTGTGTATCGTAAGTACTGGAGTCTTCTTTTCCCTAGTGATGTATTTCTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | CACACGGGGAACAGGTACACCAAAATTCCTGGGTCCTCTGCCTCTGCTGATTGTCACCAGGAGGTGTCTTaGGCCTTTGCAGATCTGATA | + |
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Preference number: 4 (lower is better) Translates to: HTGNRYTKIPGSSASADCHQEVS*AFADLI Trigger: TATCAGATCTGCAAAGGCTCAAGACACCTCCTGGTG...ACAATCAGCAGAGGCAGAGGACCCAGGAATTTTGGTGTACCTGTTCCCCGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | CACACGGGGAACAGGTACACCAAAATTCCTGGGTCCTCTGCCTCTGCTGATTGTACTTTCAGCCTCTTCTaGGCCTACAGGAGAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: HTGNRYTKIPGSSASADCTFSLF*AYRRVT Trigger: TGTGACTCTCCTGTAGGCCCAGAAGAGGCTGAAAGT...ACAATCAGCAGAGGCAGAGGACCCAGGAATTTTGGTGTACCTGTTCCCCGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | CACACGGGGAACAGGTACACCAAAATTCCTGGGTCCTCTGCCTCTGCTGATTGTACATCACACTGGCATTaGGAAACCAGTCAGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: HTGNRYTKIPGSSASADCTSHWH*ETSQLH Trigger: GTGAAGCTGACTGGTTTCTCAATGCCAGTGTGATGT...ACAATCAGCAGAGGCAGAGGACCCAGGAATTTTGGTGTACCTGTTCCCCGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | CACACGGGGAACAGGTACACCAAAATTCCTGGGTCCTCTGCCTCTGCTGATTGTGTTCCCTTTTCAGTGTaGCTGTCTTGGATTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HTGNRYTKIPGSSASADCVPFSV*LSWISP Trigger: TGGAGAAATCCAAGACAGCCACACTGAAAAGGGAAC...ACAATCAGCAGAGGCAGAGGACCCAGGAATTTTGGTGTACCTGTTCCCCGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | CCGTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACAGCAGAAGGATGTCTTTaGGTTTGGGCTCTTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PLLRRNPGSSVILPIDATAEGCL*VWALGS Trigger: ACTTCCAAGAGCCCAAACTCAAAGACATCCTTCTGC...TGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR GCA 90 bp | TATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGAACTTCTGGCCAGAGCTaGTGCAGATGGTCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: YSRQIPCSKELVIGGADRTSGQS*CRWSLL Trigger: AAGGAGAGACCATCTGCAGCAGCTCTGGCCAGAAGT...TCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR GCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGTCAGATATAGCAGCTTaGAGGCTCCCACCATTACAG | + |
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Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLSDIAA*RLPPLQ Trigger: CTGTAATGGTGGGAGCCTGCAAGCTGCTATATCTGA...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGGGTCTCCGGAGTGAATaGGTTGATATTGACCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLGLRSE*VDIDQR Trigger: TCTCTGGTCAATATCAACCCATTCACTCCGGAGACC...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGCCTCAAGATAGTCTCTaGTCTTCCTCTTGCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLPQDSL*SSSCPL Trigger: CAAAGGGCAAGAGGAAGACCAGAGACTATCTTGAGG...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGCTGATTGATGTCGCGTaGCCCAGGTCACCAATTTTA | + |
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Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLLIDVA*PRSPIL Trigger: TAAAATTGGTGACCTGGGCCACGCGACATCAATCAG...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | CACACGGGGAACAGGTACACCAAAATTCCTGGGTCCTCTGCCTCTGCTGATTGTCAAATATGTCTGCTTTaGGGAGGTGTTGGTAATTCT | + |
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Preference number: 4 (lower is better) Translates to: HTGNRYTKIPGSSASADCQICLL*GGVGNS Trigger: AGAATTACCAACACCTCCCCAAAGCAGACATATTTG...ACAATCAGCAGAGGCAGAGGACCCAGGAATTTTGGTGTACCTGTTCCCCGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGTCTCTCCTTTGGAGCTaGGTGGATCATGTTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLSLLWS*VDHVLE Trigger: CTCAAGAACATGATCCACCCAGCTCCAAAGGAGAGA...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | TATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGAAGAGAAATCTCTGGCTaGCCCAGCGAATTTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: YSRQIPCSKELVIGGADRREISG*PSEFLG Trigger: TCCCAAAAATTCGCTGGGTCAGCCAGAGATTTCTCT...TCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | GATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTTTAGGTTTGCTGATTaGTGTCGCGTGGCCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DCFHSESIVGKFLAQRSWFRFAD*CRVAQV Trigger: GACCTGGGCCACGCGACATCAATCAGCAAACCTAAA...CCAGCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR GCA 90 bp | GATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGCCCTCCGATGTCTTGTaGAGTCATCTGCCCTTCACT | + |
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Preference number: 4 (lower is better) Translates to: DCFHSESIVGKFLAQRSWPSDVL*SHLPFT Trigger: AGTGAAGGGCAGATGACTGCACAAGACATCGGAGGG...CCAGCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR GCA 90 bp | CCGTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACAGCCACTGTACTGATTTaGTTTCCTCTTCTCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: PLLRRNPGSSVILPIDATATVLI*FPLLQF Trigger: AAACTGGAGAAGAGGAAAGCAAATCAGTACAGTGGC...TGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR GCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGCTGGAAAGTTCCCTTTaGGGATATGATGCCACATGT | + |
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Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLLESSL*GYDATC Trigger: ACATGTGGCATCATATCCGCAAAGGGAACTTTCCAG...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AAGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCCAGGCTTTTGGCTCTaGGCCCCTCCGATGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KRLLPFRKYSRQIPCSKEPGFWL*APPMSC Trigger: ACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGG...CTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGTCATCCGAGAGCTCTTaGGAAATCTCTGGAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLSSESS*EISGKF Trigger: GAACTTTCCAGAGATTTCCCAAGAGCTCTCGGATGA...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCCAGAGCTGCTGCAGATaGTCTCTCCTTTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RDCFHSESIVGKFLAQRSQSCCR*SLLWSW Trigger: CCAGCTCCAAAGGAGAGACCATCTGCAGCAGCTCTG...GCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR GCA 90 bp | CCGTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACAGACTTTCCTTGTCTCTaGTCAGAGAAGTATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: PLLRRNPGSSVILPIDATDFPCL*SEKYEV Trigger: AACTTCATACTTCTCTGAGCAGAGACAAGGAAAGTC...TGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | GATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGAGAGAATTCGACTTCTaGCCAGAGCTGCTGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: DCFHSESIVGKFLAQRSWREFDF*PELLQM Trigger: CATCTGCAGCAGCTCTGGCCAGAAGTCGAATTCTCT...CCAGCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| 3UTR CAA 72 bp | CTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGATCTaGGAAAGCACTCTGAAATACAGGCAACATTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKGAGDWRSRQI*ESTLKYRQHSL Trigger: AAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | CAGATCTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTGGAAGCTGGCACACCATGCCAGAATTGTaGATGTACTTAAGTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QILESTLKYRQHSLGSWHTMPEL*MYLSPK Trigger: CTTGGGACTTAAGTACATCCACAATTCTGGCATGGT...GTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCAGATGGTCTCTCCTTTaGAGCTGGGTGGATCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDCFHSESIVGKFLAQRSRWSLL*SWVDHV Trigger: AACATGATCCACCCAGCTCCAAAGGAGAGACCATCT...GCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGAAATTCAGTTGTTTCTaGAGTTCATCAGTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPGSSVILPIDATSGWLLKFSCF*SSSVFS Trigger: GGAGAAGACTGATGAACTCCAGAAACAACTGAATTT...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | TCTAGAAATACATCACTAGGGAAAAGAAGACTCCAGTACTTACGATACACAAGAGTGTCTCTGGGCATTTaGGAGGGCCTGAAACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SRNTSLGKRRLQYLRYTRVSLGI*EGLKLI Trigger: AATCAGTTTCAGGCCCTCCCAAATGCCCAGAGACAC...TCTTGTGTATCGTAAGTACTGGAGTCTTCTTTTCCCTAGTGATGTATTTCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | AGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCCTCTTGGGAAATCTCTaGAAAGTTCCCTTTGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RDCFHSESIVGKFLAQRSLLGNL*KVPFAD Trigger: ATCCGCAAAGGGAACTTTCCAGAGATTTCCCAAGAG...GCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | AAGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGCTCAGAGAAGTATaGAGTTCATCTCTGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRLLPFRKYSRQIPCSKELLREV*SSSLVG Trigger: TCCTACCAGAGATGAACTTCATACTTCTCTGAGCAG...CTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | GCCACATCAGGATGGCTTTTGAGATCTTTGTACATTCAAGCTGGTTCAGTTTTGTCACACTGCATCTTATaGCAAATGAAGATGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ATSGWLLRSLYIQAGSVLSHCIL*QMKMLL Trigger: CAGTAACATCTTCATTTGTCATAAGATGCAGTGTGA...CAAAACTGAACCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR GCA 90 bp | AAAAGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGTGTCCAGGTGTACCATaGCAGAATTGTGGATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KRDCFHSESIVGKFLAQRCPGVP*QNCGCT Trigger: AGTACATCCACAATTCTGGCATGGTACACCTGGACA...CCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CCA 90 bp | GCCACATCAGGATGGCTTTTGAGATCTTTGTACATTCAAGCTGGTTCAGTTTTGCTTGGAAGTGATTATTaGACGCAGTGTTTTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ATSGWLLRSLYIQAGSVLLGSDY*TQCFQI Trigger: TATCTGAAAACACTGCGTCCAATAATCACTTCCAAG...CAAAACTGAACCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
||
| 3UTR CAA 72 bp | GTGATCTTACCTATAGATGCCACATCAGGATGGCTTTaGAGATCTTTGTACATTCAAGCTGGTTCAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VILPIDATSGWL*RSLYIQAGSVL Trigger: CAAAACTGAACCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR TCA 90 bp | AAGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGGGTGGATCATGTTCTTaGGTAGACCATAAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRLLPFRKYSRQIPCSKEGGSCS*VDHKSH Trigger: ATGACTTTTATGGTCTACTCAAGAACATGATCCACC...CTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
||
| CDS CCA 90 bp | GGCACGGGACCCTCCAACTCCTCACTTTCTTCCCTCCCAGGCTTTTaGCTCTGGGCCCCTCCGATGTCTTGTGCAGTCATCTGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGPSNSSLSSLPGF*LWAPPMSCAVICPS Trigger: TGAAGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAAGAAAGTGAGGAGTTGGAGGGTCCCGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS CCA 90 bp | GGACCCTCCAACTCCTCACTTTCTTCCCTCCCAGGCTTTTGGCTCTaGGCCCCTCCGATGTCTTGTGCAGTCATCTGCCCTTCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPSNSSLSSLPGFWL*APPMSCAVICPSLS Trigger: TGAGAGTGAAGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAAGAAAGTGAGGAGTTGGAGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS-3UTR CAA 90 bp | CCGTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATTCCCTCCCAGGCTTTaGGCTCTGGGCCCCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLRRNPGSSVILPIDATFPPRL*ALGPSD Trigger: ATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAA...TGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS GCA 90 bp | AGGGCGCCTTCCTCCTTCCTCCCACCAGGAGGTGTCTTGAGCCTTTaGAGATCTGATAATAACAATGGTGGACTTCTCTCTGAGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAPSSFLPPGGVLSL*RSDNNNGGLLSEGS Trigger: AGACCCCTCAGAGAGAAGTCCACCATTGTTATTATCAGATCTGCAAAGGCTCAAGACACCTCCTGGTGGGAGGAAGGAGGAAGGCGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS TCA 90 bp | CAAAGATCAGGACCTGGACTTTCCTTGTCTCTGCTCAGAGAAGTATaGAGTTCATCTCTGGTAGGAGGCACGGGACCCTCCAACTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRSGPGLSLSLLREV*SSSLVGGTGPSNSS Trigger: TGAGGAGTTGGAGGGTCCCGTGCCTCCTACCAGAGATGAACTTCATACTTCTCTGAGCAGAGACAAGGAAAGTCCAGGTCCTGATCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS CCA 90 bp | CTGGCAGCTTGCTCTTGCTGTGTAATACTGGTGTCTCTGGGCATTTaGGAGGGCCTGAAACTGATTTCCAAAGATCAGGACCTGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAACSCCVILVSLGI*EGLKLISKDQDLDF Trigger: AAAGTCCAGGTCCTGATCTTTGGAAATCAGTTTCAGGCCCTCCCAAATGCCCAGAGACACCAGTATTACACAGCAAGAGCAAGCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS-3UTR CAA 90 bp | CAGATCTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTGGAAGCTGGCACGGTGTCTCTGGGCATTaGGGAGGGCCTGAAACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QILESTLKYRQHSLGSWHGVSGH*GGPETD Trigger: ATCAGTTTCAGGCCCTCCCAAATGCCCAGAGACACC...GTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS TCA 90 bp | TCCGAGAGCTCTTGGGAAATCTCTGGAAAGTTCCCTTTGCGGATATaGTGCCACATGTCACCATTGATGGGTAAAGACTCTGCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SESSWEISGKFPLRI*CHMSPLMGKDSAPA Trigger: TGCAGGAGCAGAGTCTTTACCCATCAATGGTGACATGTGGCATCATATCCGCAAAGGGAACTTTCCAGAGATTTCCCAAGAGCTCTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | AACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCAGGATGGCTTTTGACTGGCAGCTTGCTCTaGCTGTGTAATACTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NPGSSVILPIDATSGWLLTGSLL*LCNTGV Trigger: GACACCAGTATTACACAGCAAGAGCAAGCTGCCAGT...CAAAAGCCATCCTGATGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | CCGTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACAGTCATCCGAGAGCTCTaGGGAAATCTCTGGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLLRRNPGSSVILPIDATVIREL*GNLWKV Trigger: AACTTTCCAGAGATTTCCCAAGAGCTCTCGGATGAC...TGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | TATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGAGGACCTGGACTTTCCTaGTCTCTGCTCAGAGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: YSRQIPCSKELVIGGADRGPGLS*SLLREV Trigger: TACTTCTCTGAGCAGAGACAAGGAAAGTCCAGGTCC...TCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | CAGATCTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTGGAAGCTGGCACGTAGGGACTGGCAGCTaGCTCTTGCTGTGTAATACT | + |
|
Preference number: 5 (lower is better) Translates to: QILESTLKYRQHSLGSWHVGTGS*LLLCNT Trigger: AGTATTACACAGCAAGAGCAAGCTGCCAGTCCCTAC...GTGCCAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS CCA 90 bp | CACACTGGCATTGAGAAACCAGTCAGCTTCACTTTCAGCCTCTTCTaGGCCTACAGGAGAGTCACACTGCATCTTATGACAAATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HTGIEKPVSFTFSLF*AYRRVTLHLMTNED Trigger: ATCTTCATTTGTCATAAGATGCAGTGTGACTCTCCTGTAGGCCCAGAAGAGGCTGAAAGTGAAGCTGACTGGTTTCTCAATGCCAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | CCGTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACAGTGTTGGTAATTCTCTaGCAAGATCTCATTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLLRRNPGSSVILPIDATVLVIL*QDLISQ Trigger: CTGGCTAATGAGATCTTGCAAGAGAATTACCAACAC...TGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | CCGTTGCTAAGGAGAAACCCTGGAAGCTCGGTGATCTTACCTATAGATGCCACATCTTCCTCTTGCCCTTaGATTGAAGGAGTAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLRRNPGSSVILPIDATSSSCP*IEGVIF Trigger: GAAAATTACTCCTTCAATCAAAGGGCAAGAGGAAGA...TGTGGCATCTATAGGTAAGATCACCGAGCTTCCAGGGTTTCTCCTTAGCAACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | TATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGTGATTGGAGGAGCAGACAGATGTACCATGCCAGAATaGTGGATGTACTTAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSRQIPCSKELVIGGADRCTMPE*WMYLSP Trigger: GGGACTTAAGTACATCCACAATTCTGGCATGGTACA...TCTGTCTGCTCCTCCAATCACCAGCTCCTTTGAGCAAGGAATTTGCCTACTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | CAGACAGATCTTGGAAAGCACTCTGAAATACAGGCAACATTCTCTTGGAAGCTGTCTTCCACTTTAGGTTaGCTGATTGATGTCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QTDLGKHSEIQATFSWKLSSTLG*LIDVAW Trigger: CCACGCGACATCAATCAGCAAACCTAAAGTGGAAGA...CAGCTTCCAAGAGAATGTTGCCTGTATTTCAGAGTGCTTTCCAAGATCTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | GCCACATCAGGATGGCTTTTGAGATCTTTGTACATTCAAGCTGGTTCAGTTTTGAGCCACTGTACTGATTaGCTTTCCTCTTCTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATSGWLLRSLYIQAGSVLSHCTD*LSSSPV Trigger: AACTGGAGAAGAGGAAAGCAAATCAGTACAGTGGCT...CAAAACTGAACCAGCTTGAATGTACAAAGATCTCAAAAGCCATCCTGATGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | GATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTGGCTGCAGCCACTGCGATaGTTAATCCTAAGGCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: DCFHSESIVGKFLAQRSWLQPLR*LILRQI Trigger: TATTTGCCTTAGGATTAACAATCGCAGTGGCTGCAG...CCAGCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | AGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTTTGAGTTTGGGCTCTaGGAAGTGATTATTGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: RDCFHSESIVGKFLAQRSFEFGL*EVIIGR Trigger: GCGTCCAATAATCACTTCCAAGAGCCCAAACTCAAA...GCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | AAGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGTCCGGAGTGAATGGGTaGATATTGACCAGAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRLLPFRKYSRQIPCSKESGVNG*ILTRDK Trigger: TTTGTCTCTGGTCAATATCAACCCATTCACTCCGGA...CTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | TCTAGAAATACATCACTAGGGAAAAGAAGACTCCAGTACTTACGATACACAAGATGCCACATGTCACCATaGATGGGTAAAGACTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRNTSLGKRRLQYLRYTRCHMSP*MGKDSA Trigger: AGCAGAGTCTTTACCCATCAATGGTGACATGTGGCA...TCTTGTGTATCGTAAGTACTGGAGTCTTCTTTTCCCTAGTGATGTATTTCTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | TCTAGAAATACATCACTAGGGAAAAGAAGACTCCAGTACTTACGATACACAAGAGAGAAGCTTAATTTCTaGTTCAGTCCCTGGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRNTSLGKRRLQYLRYTREKLNF*FSPWSV Trigger: GACTGACCAGGGACTGAACAAGAAATTAAGCTTCTC...TCTTGTGTATCGTAAGTACTGGAGTCTTCTTTTCCCTAGTGATGTATTTCTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | TCTAGAAATACATCACTAGGGAAAAGAAGACTCCAGTACTTACGATACACAAGAAAGATGTTACTGGGTTaGATGTCCAGGTGTACCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRNTSLGKRRLQYLRYTRKMLLG*MSRCTM Trigger: CATGGTACACCTGGACATCAAACCCAGTAACATCTT...TCTTGTGTATCGTAAGTACTGGAGTCTTCTTTTCCCTAGTGATGTATTTCTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | AAAAGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGTGCTTTGGGGAGGTGTaGGTAATTCTCTTGCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KRDCFHSESIVGKFLAQRCFGEV*VILLQD Trigger: ATCTTGCAAGAGAATTACCAACACCTCCCCAAAGCA...CCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS-3UTR CAA 90 bp | AGAGATTGCTTCCATTCAGAAAGTATAGTAGGCAAATTCCTTGCTCAAAGGAGCTTTCTCCAAATTCAGTaGTTTCTGGAGTTCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RDCFHSESIVGKFLAQRSFLQIQ*FLEFIS Trigger: ACTGATGAACTCCAGAAACAACTGAATTTGGAGAAA...GCTCCTTTGAGCAAGGAATTTGCCTACTATACTTTCTGAATGGAAGCAATCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS CAA 90 bp | AGGCACGGGACCCTCCAACTCCTCACTTTCTTCCCTCCCAGGCTTTaGGCTCTGGGCCCCTCCGATGTCTTGTGCAGTCATCTGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RHGTLQLLTFFPPRL*ALGPSDVLCSHLPF Trigger: GAAGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAAGAAAGTGAGGAGTTGGAGGGTCCCGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS CAA 72 bp | CCTCCCAGGCTTTTGGCTCTGGGCCCCTCCGATGTCTaGTGCAGTCATCTGCCCTTCACTCTCAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPRLLALGPSDV*CSHLPFTLSVF Trigger: GAAGACACTGAGAGTGAAGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS CCA 72 bp | AACTCCTCACTTTCTTCCCTCCCAGGCTTTTGGCTCTaGGCCCCTCCGATGTCTTGTGCAGTCATCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NSSLSSLPGFWL*APPMSCAVICP Trigger: AGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAAGAAAGTGAGGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS CAA 72 bp | ACCCTCCAACTCCTCACTTTCTTCCCTCCCAGGCTTTaGGCTCTGGGCCCCTCCGATGTCTTGTGCAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TLQLLTFFPPRL*ALGPSDVLCSH Trigger: ATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAAGAAAGTGAGGAGTTGGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS TCA 72 bp | GGACCTGGACTTTCCTTGTCTCTGCTCAGAGAAGTATaGAGTTCATCTCTGGTAGGAGGCACGGGACCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPGLSLSLLREV*SSSLVGGTGPS Trigger: GGAGGGTCCCGTGCCTCCTACCAGAGATGAACTTCATACTTCTCTGAGCAGAGACAAGGAAAGTCCAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS TCA 72 bp | GGGCGCCTTCCTCCTTCCTCCCACCAGGAGGTGTCTTaGGCCTTTGCAGATCTGATAATAACAATGGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRLPPSSHQEVS*AFADLIITMVD Trigger: GTCCACCATTGTTATTATCAGATCTGCAAAGGCTCAAGACACCTCCTGGTGGGAGGAAGGAGGAAGGCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
||
| CDS GCA 72 bp | TGGCTCTGGGCCCCTCCGATGTCTTGTGCAGTCATCTaGCCTTCACTCTCAGTGTCTTCTTCACAAAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WLWAPPMSCAVI*PSLSVSSSQKE Trigger: CTCCTTTTGTGAAGAAGACACTGAGAGTGAAGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS GCA 72 bp | CAAGAAAGGCCAGAGAATTCGACTTCTGGCCAGAGCTaGTGCAGATGGTCTCTCCTTTGGAGCTGGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QERPENSTSGQS*CRWSLLWSWVD Trigger: ATCCACCCAGCTCCAAAGGAGAGACCATCTGCAGCAGCTCTGGCCAGAAGTCGAATTCTCTGGCCTTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
||
| CDS CAA 90 bp | CCCAGCGAATTTTTGGGAGTGGAGAAGTTGGTAGGGACTGGCAGCTaGCTCTTGCTGTGTAATACTGGTGTCTCTGGGCATTTGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSEFLGVEKLVGTGS*LLLCNTGVSGHLGG Trigger: CCCTCCCAAATGCCCAGAGACACCAGTATTACACAGCAAGAGCAAGCTGCCAGTCCCTACCAACTTCTCCACTCCCAAAAATTCGCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS CAA 72 bp | GGAGTGGAGAAGTTGGTAGGGACTGGCAGCTTGCTCTaGCTGTGTAATACTGGTGTCTCTGGGCATTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GVEKLVGTGSLL*LCNTGVSGHLG Trigger: TCCCAAATGCCCAGAGACACCAGTATTACACAGCAAGAGCAAGCTGCCAGTCCCTACCAACTTCTCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS CAA 72 bp | AGGGCGCCTTCCTCCTTCCTCCCACCAGGAGGTGTCTaGAGCCTTTGCAGATCTGATAATAACAATGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: RAPSSFLPPGGV*SLCRSDNNNGG Trigger: TCCACCATTGTTATTATCAGATCTGCAAAGGCTCAAGACACCTCCTGGTGGGAGGAAGGAGGAAGGCGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS CAA 90 bp | ACTTTCTTCCCTCCCAGGCTTTTGGCTCTGGGCCCCTCCGATGTCTaGTGCAGTCATCTGCCCTTCACTCTCAGTGTCTTCTTCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: TFFPPRLLALGPSDV*CSHLPFTLSVFFTK Trigger: TTTTGTGAAGAAGACACTGAGAGTGAAGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAAGAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038907.9 ENSMUST00000141490.2 ENSMUST00000202464.4 |
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| CDS CAA 90 bp | GAATTTTTGGGAGTGGAGAAGTTGGTAGGGACTGGCAGCTTGCTCTaGCTGTGTAATACTGGTGTCTCTGGGCATTTGGGAGGGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: EFLGVEKLVGTGSLL*LCNTGVSGHLGGPE Trigger: TTCAGGCCCTCCCAAATGCCCAGAGACACCAGTATTACACAGCAAGAGCAAGCTGCCAGTCCCTACCAACTTCTCCACTCCCAAAAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS TCA 72 bp | CGGGAGGAGAGCTTCTCTAGCAGAGAAATCTCTGGCTaGCCCAGCGAATTTTTGGGAGTGGAGAAGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: REESFSSREISG*PSEFLGVEKLV Trigger: TACCAACTTCTCCACTCCCAAAAATTCGCTGGGTCAGCCAGAGATTTCTCTGCTAGAGAAGCTCTCCTCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS TCA 72 bp | AGTTCCCTTTGCGGATATGATGCCACATGTCACCATTaGTGGGTAAAGACTCTGCTCCTGCAGCCACTGCGA | + |
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Preference number: 6 (lower is better) Translates to: SSLCGYDATCHH*WVKTLLLQPLR Trigger: TCGCAGTGGCTGCAGGAGCAGAGTCTTTACCCATCAATGGTGACATGTGGCATCATATCCGCAAAGGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS CAA 72 bp | TTTTTGGGAGTGGAGAAGTTGGTAGGGACTGGCAGCTaGCTCTTGCTGTGTAATACTGGTGTCTCTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FLGVEKLVGTGS*LLLCNTGVSGH Trigger: ATGCCCAGAGACACCAGTATTACACAGCAAGAGCAAGCTGCCAGTCCCTACCAACTTCTCCACTCCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS TCA 72 bp | ATGGTCTCTCCTTTGGAGCTGGGTGGATCATGTTCTTaGGTAGACCATAAAAGTCATCCGAGAGCTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: MVSPLELGGSCS*VDHKSHPRALG Trigger: CCCAAGAGCTCTCGGATGACTTTTATGGTCTACTCAAGAACATGATCCACCCAGCTCCAAAGGAGAGACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS GCA 72 bp | TCCTCCTTCCTCCCACCAGGAGGTGTCTTGAGCCTTTaGAGATCTGATAATAACAATGGTGGACTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSFLPPGGVLSL*RSDNNNGGLLS Trigger: AGAGAGAAGTCCACCATTGTTATTATCAGATCTGCAAAGGCTCAAGACACCTCCTGGTGGGAGGAAGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS CCA 72 bp | TGCTCTTGCTGTGTAATACTGGTGTCTCTGGGCATTTaGGAGGGCCTGAAACTGATTTCCAAAGATCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: CSCCVILVSLGI*EGLKLISKDQD Trigger: GTCCTGATCTTTGGAAATCAGTTTCAGGCCCTCCCAAATGCCCAGAGACACCAGTATTACACAGCAAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS CCA 72 bp | ATTGAGAAACCAGTCAGCTTCACTTTCAGCCTCTTCTaGGCCTACAGGAGAGTCACACTGCATCTTATGACA | + |
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Preference number: 6 (lower is better) Translates to: IEKPVSFTFSLF*AYRRVTLHLMT Trigger: TGTCATAAGATGCAGTGTGACTCTCCTGTAGGCCCAGAAGAGGCTGAAAGTGAAGCTGACTGGTTTCTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS CAA 72 bp | TTGCTCTTGCTGTGTAATACTGGTGTCTCTGGGCATTaGGGAGGGCCTGAAACTGATTTCCAAAGATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LLLLCNTGVSGH*GGPETDFQRSG Trigger: TCCTGATCTTTGGAAATCAGTTTCAGGCCCTCCCAAATGCCCAGAGACACCAGTATTACACAGCAAGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038907.9 ENSMUST00000202464.4 |
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| CDS TCA 72 bp | TCTTCTGGGCCTACAGGAGAGTCACACTGCATCTTATaGCAAATGAAGATGTTACTGGGTTTGATGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSGPTGESHCIL*QMKMLLGLMSR Trigger: CCTGGACATCAAACCCAGTAACATCTTCATTTGTCATAAGATGCAGTGTGACTCTCCTGTAGGCCCAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS CCA 72 bp | ACCATAAAAGTCATCCGAGAGCTCTTGGGAAATCTCTaGAAAGTTCCCTTTGCGGATATGATGCCACATGTC | + |
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Preference number: 6 (lower is better) Translates to: TIKVIRELLGNL*KVPFADMMPHV Trigger: GACATGTGGCATCATATCCGCAAAGGGAACTTTCCAGAGATTTCCCAAGAGCTCTCGGATGACTTTTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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| CDS TCA 72 bp | TCTTGGGAAATCTCTGGAAAGTTCCCTTTGCGGATATaGTGCCACATGTCACCATTGATGGGTAAAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: SWEISGKFPLRI*CHMSPLMGKDS Trigger: AGAGTCTTTACCCATCAATGGTGACATGTGGCATCATATCCGCAAAGGGAACTTTCCAGAGATTTCCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038907.9 |
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