Pregenerated sensors for WDTC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037622Ensembl transcript IDs: ENSMUST00000043305.14, ENSMUST00000105906.2
Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCGAGACAGCCTAGGACAGGCCAGGAGCGGGGGAGGAAGCTCCACTaGCCCCAGGCAGGTGGCCTGACCTTGCCACTGCGGGATCCTGTT | + |
Preference number: 1 (lower is better) Translates to: ARQPRTGQERGRKLH*PQAGGLTLPLRDPV Trigger: AACAGGATCCCGCAGTGGCAAGGTCAGGCCACCTGCCTGGGGGCAGTGGAGCTTCCTCCCCCGCTCCTGGCCTGTCCTAGGCTGTCTCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CCA 90 bp | CCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTaGCAACAACAGGCCAGGCAAGCCTCGGCCAGCAGGGAGTTCCAC | + |
Preference number: 1 (lower is better) Translates to: PSGKTTGELARESGE*QQQARQASASREFH Trigger: GTGGAACTCCCTGCTGGCCGAGGCTTGCCTGGCCTGTTGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR GCA 90 bp | CCAGGCAGGTGGCCTGACCTTGCCACTGCGGGATCCTGTTTCCTATaGTTCCACCCGAACACTGGTGGCTGTGGAGGGACCTTCCGGAAA | + |
Preference number: 1 (lower is better) Translates to: PGRWPDLATAGSCFL*FHPNTGGCGGTFRK Trigger: TTTCCGGAAGGTCCCTCCACAGCCACCAGTGTTCGGGTGGAAGCATAGGAAACAGGATCCCGCAGTGGCAAGGTCAGGCCACCTGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CCA 90 bp | AAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGTaGGAAGGAGGGCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCC | + |
Preference number: 1 (lower is better) Translates to: KSHHFFGLCGGSACG*EGGRRGCKGSLGRA Trigger: GGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGCCCTCCTTCCCACCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR TCA 90 bp | GCAGTCCGTAAAGACAGCTTCAGCTCTTGCCTCTCCACTGGAGGCTaGAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGACACCGAAGC | + |
Preference number: 1 (lower is better) Translates to: AVRKDSFSSCLSTGG*RILRRARAFQRHRS Trigger: GCTTCGGTGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGGCAAGAGCTGAAGCTGTCTTTACGGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR TCA 90 bp | AAGACAGCTTCAGCTCTTGCCTCTCCACTGGAGGCTGAAGGATTTTaGGAAGGGCCAGAGCCTTCCAGAGACACCGAAGCAGGAGGTAAG | + |
Preference number: 1 (lower is better) Translates to: KTASALASPLEAEGF*EGPEPSRDTEAGGK Trigger: CTTACCTCCTGCTTCGGTGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGGCAAGAGCTGAAGCTGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR GCA 90 bp | GACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTaGAGCAATCCCCACCCACAAAGTCAAACTAACAAACAAAACAGG | + |
Preference number: 1 (lower is better) Translates to: DSQGTISPRVRKPAS*SNPHPQSQTNKQNR Trigger: CCTGTTTTGTTTGTTAGTTTGACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTTGGCGGCTCAGCATGTaGGTGGGAAGGAGGGCGGAG | + |
Preference number: 2 (lower is better) Translates to: SPQRLQLEGCRPEEAHRAWRLSM*VGRRAE Trigger: CTCCGCCCTCCTTCCCACCCACATGCTGAGCCGCCA...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTCCACCCGAACACTGGTaGCTGTGGAGGGACCTTCCG | + |
Preference number: 2 (lower is better) Translates to: SPQRLQLEGCRPEEAHRAPPEHW*LWRDLP Trigger: CGGAAGGTCCCTCCACAGCCACCAGTGTTCGGGTGG...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCATGGCGGCTCAGCATGTaGGTGGGAAGGAGGGCGGAG | + |
Preference number: 2 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPWRLSM*VGRRAE Trigger: CTCCGCCCTCCTTCCCACCCACATGCTGAGCCGCCA...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGCCCAGGCAGGTGGCCTaGCCTTGCCACTGCGGGATC | + |
Preference number: 2 (lower is better) Translates to: TLTLLGAEQQKARLLPQRPRQVA*PCHCGI Trigger: GATCCCGCAGTGGCAAGGTCAGGCCACCTGCCTGGG...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGTCTCCTGCACAGGGCTaGGTACTGGGGCCAGGAGGG | + |
Preference number: 2 (lower is better) Translates to: GMNQLPAPEQEPRGQRERSPAQG*VLGPGG Trigger: CCCTCCTGGCCCCAGTACCCAGCCCTGTGCAGGAGA...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTCCTGGCGGGGAGCTCTaGCAGAAAGGTCACAGTGAG | + |
Preference number: 2 (lower is better) Translates to: SPQRLQLEGCRPEEAHRAPGGEL*QKGHSE Trigger: CTCACTGTGACCTTTCTGCCAGAGCTCCCCGCCAGG...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | ACCCCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGGGCCGGCACTGCACCTaGCCCTCTGCGCTGTCCTCG | + |
Preference number: 2 (lower is better) Translates to: TPPRHTVGKARPSETARQGRHCT*PSALSS Trigger: CGAGGACAGCGCAGAGGGCCAGGTGCAGTGCCGGCC...CTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGCCAGGAGGGTCTAGCTaGGCCGGCACTGCACCTGGC | + |
Preference number: 2 (lower is better) Translates to: TLTLLGAEQQKARLLPQRPGGSS*AGTAPG Trigger: GCCAGGTGCAGTGCCGGCCCAGCTAGACCCTCCTGG...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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3UTR-3UTR GCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACACTGCACCTGGCCCTCTaGGCTGTCCTCGTCATCAGA | + |
Preference number: 2 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTLHLAL*AVLVIR Trigger: TCTGATGACGAGGACAGCGCAGAGGGCCAGGTGCAG...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGCACAGGGCTGGGTACTaGGGCCAGGAGGGTCTAGCT | + |
Preference number: 2 (lower is better) Translates to: GMNQLPAPEQEPRGQRERHRAGY*GQEGLA Trigger: AGCTAGACCCTCCTGGCCCCAGTACCCAGCCCTGTG...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | CCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTCAGAGCCCAGCCCTCTaGTCTCCTGCACAGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: PPRHTVGKARPSETARQPQSPAL*SPAQGW Trigger: CCAGCCCTGTGCAGGAGATCAGAGGGCTGGGCTCTG...AGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | GCTGGGGCTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCACAGAGCCCAGCCCTCTaGTCTCCTGCACAGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: AGAGDSQGTISPRVRKPAQSPAL*SPAQGW Trigger: CCAGCCCTGTGCAGGAGATCAGAGGGCTGGGCTCTG...TGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAGCCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGGCAGAAAGGTCACAGTaGGGCCGAGAAGCGCCCCAG | + |
Preference number: 2 (lower is better) Translates to: TLTLLGAEQQKARLLPQRAERSQ*GREAPQ Trigger: CTGGGGCGCTTCTCGGCCTCACTGTGACCTTTCTGC...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR GCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGAGGGCGGAGAGGGTaGAAAGGGTCCTTAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTGGRRG*KGSLGR Trigger: TCTTCCTAAGGACCCTTTGCACCCTCTCCGCCCTCC...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACATCTCCTGCACAGGGCTaGGTACTGGGGCCAGGAGGG | + |
Preference number: 2 (lower is better) Translates to: TFRKDHRGASPGVRRVATSPAQG*VLGPGG Trigger: CCCTCCTGGCCCCAGTACCCAGCCCTGTGCAGGAGA...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCACTTCCACCCGAACACTaGTGGCTGTGGAGGGACCTT | + |
Preference number: 2 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPLPPEH*WLWRDL Trigger: AAGGTCCCTCCACAGCCACCAGTGTTCGGGTGGAAG...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGCCTGGCGGGGAGCTCTaGCAGAAAGGTCACAGTGAG | + |
Preference number: 2 (lower is better) Translates to: GMNQLPAPEQEPRGQRERPGGEL*QKGHSE Trigger: CTCACTGTGACCTTTCTGCCAGAGCTCCCCGCCAGG...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGAGGGAGGCTTGGTGGTaGAGTGGCCGCTGTGTCCAG | + |
Preference number: 2 (lower is better) Translates to: TLTLLGAEQQKARLLPQRREAWW*SGRCVQ Trigger: CTGGACACAGCGGCCACTCCACCACCAAGCCTCCCT...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCGAGGCTGAAGGATTTTaGGAAGGGCCAGAGCCTTCC | + |
Preference number: 2 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTEAEGF*EGPEPS Trigger: GGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTC...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGAGCTCAGAAGCTAGACTaGGAGGAGGCACCTGGCAGA | + |
Preference number: 2 (lower is better) Translates to: GLCVSPHCRVQARQAGGRAQKLD*EEAPGR Trigger: TCTGCCAGGTGCCTCCTCTCAGTCTAGCTTCTGAGC...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGCGCTGCTCAGGCCTGTaGTCCGATAGCCCATGTCCA | + |
Preference number: 2 (lower is better) Translates to: AERVQRVLRKSHLSRVGLRCSGL*SDSPCP Trigger: TGGACATGGGCTATCGGATCACAGGCCTGAGCAGCG...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCGAACACTGGTGGCTGTaGAGGGACCTTCCGGAAAGA | + |
Preference number: 2 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTEHWWL*RDLPER Trigger: TCTTTCCGGAAGGTCCCTCCACAGCCACCAGTGTTC...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR TCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGGAGGCTGAAGGATTTTaGGAAGGGCCAGAGCCTTCC | + |
Preference number: 2 (lower is better) Translates to: GMNQLPAPEQEPRGQREREAEGF*EGPEPS Trigger: GGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTC...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCCTTTTCTGCTGGGGCTaGGGACAGTCAAGGGACAAT | + |
Preference number: 2 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTLFCWG*GQSRDN Trigger: ATTGTCCCTTGACTGTCCCCAGCCCCAGCAGAAAAG...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGCTCCTACTTTTCTGCTaGGGCTGGGGACAGTCAAGG | + |
Preference number: 2 (lower is better) Translates to: GMNQLPAPEQEPRGQRERLLLFC*GWGQSR Trigger: CCTTGACTGTCCCCAGCCCCAGCAGAAAAGTAGGAG...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGAGAACACTGGTGGCTGTaGAGGGACCTTCCGGAAAGA | + |
Preference number: 2 (lower is better) Translates to: GLCVSPHCRVQARQAGGREHWWL*RDLPER Trigger: TCTTTCCGGAAGGTCCCTCCACAGCCACCAGTGTTC...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CAA 90 bp | CCCAGAGCAGCAGGGGACAGAGAAAAGCCATCACTTCTTTGGTCTTaGTGGCGGCTCAGCATGTGGGTGGGAAGGAGGGCGGAGAGGGTG | + |
Preference number: 2 (lower is better) Translates to: PRAAGDREKPSLLWS*WRLSMWVGRRAERV Trigger: CACCCTCTCCGCCCTCCTTCCCACCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTCTGTCCCCTGCTGCTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR GCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAAGAAAGCCAGCAAGTTaGAGCAATCCCCACCCACAA | + |
Preference number: 2 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPRKPAS*SNPHPQ Trigger: TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCT...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR GCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAAGAAAGCCAGCAAGTTaGAGCAATCCCCACCCACAA | + |
Preference number: 2 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTRKPAS*SNPHPQ Trigger: TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCT...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR GCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGGATCCTGTTTCCTATaGTTCCACCCGAACACTGGT | + |
Preference number: 2 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPGSCFL*FHPNTG Trigger: ACCAGTGTTCGGGTGGAAGCATAGGAAACAGGATCC...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | ACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCACTTTTCTGCTGGGGCTaGGGACAGTCAAGGGACAAT | + |
Preference number: 2 (lower is better) Translates to: TGLGEAGMNQLPAPEQEPLFCWG*GQSRDN Trigger: ATTGTCCCTTGACTGTCCCCAGCCCCAGCAGAAAAG...TGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | ACCCCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCTTCCACCCGAACACTaGTGGCTGTGGAGGGACCTT | + |
Preference number: 2 (lower is better) Translates to: TPPRHTVGKARPSETARQLPPEH*WLWRDL Trigger: AAGGTCCCTCCACAGCCACCAGTGTTCGGGTGGAAG...CTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGCTCTTGCCTCTCCACTaGAGGCTGAAGGATTTTGAG | + |
Preference number: 2 (lower is better) Translates to: GMNQLPAPEQEPRGQRERLLPLH*RLKDFE Trigger: CTCAAAATCCTTCAGCCTCCAGTGGAGAGGCAAGAG...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR GCA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACAGCCCTCTGATCTCCTaGACAGGGCTGGGTACTGGG | + |
Preference number: 2 (lower is better) Translates to: QGTISPRVRKPASCSNPHSPLIS*TGLGTG Trigger: CCCAGTACCCAGCCCTGTGCAGGAGATCAGAGGGCT...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACACGGGAGTCAGGAGAGTaGCAACAACAGGCCAGGCAA | + |
Preference number: 2 (lower is better) Translates to: RHTVGKARPSETARQPRTRESGE*QQQARQ Trigger: TTGCCTGGCCTGTTGTTGCCACTCTCCTGACTCCCG...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR GCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTAGCCCTCTGATCTCCTaGACAGGGCTGGGTACTGGG | + |
Preference number: 2 (lower is better) Translates to: ISPRVRKPASCSNPHPQSSPLIS*TGLGTG Trigger: CCCAGTACCCAGCCCTGTGCAGGAGATCAGAGGGCT...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CCA 90 bp | ACCCCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCTCTTGCCTCTCCACTaGAGGCTGAAGGATTTTGAG | + |
Preference number: 2 (lower is better) Translates to: TPPRHTVGKARPSETARQLLPLH*RLKDFE Trigger: CTCAAAATCCTTCAGCCTCCAGTGGAGAGGCAAGAG...CTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR GCA 72 bp | GAGGGTCTAGCTGGGCCGGCACTGCACCTGGCCCTCTaGGCTGTCCTCGTCATCAGAGGCCCCGGCGCCCCC | + |
Preference number: 3 (lower is better) Translates to: EGLAGPALHLAL*AVLVIRGPGAP Trigger: GGGGGCGCCGGGGCCTCTGATGACGAGGACAGCGCAGAGGGCCAGGTGCAGTGCCGGCCCAGCTAGACCCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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3UTR CCA 72 bp | GAGCCACCTCAGCAGGGTAGGCCTGGCGGGGAGCTCTaGCAGAAAGGTCACAGTGAGGCCGAGAAGCGCCCC | + |
Preference number: 3 (lower is better) Translates to: EPPQQGRPGGEL*QKGHSEAEKRP Trigger: GGGGCGCTTCTCGGCCTCACTGTGACCTTTCTGCCAGAGCTCCCCGCCAGGCCTACCCTGCTGAGGTGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR CCA 72 bp | AGGGAAGGGAGGCTGCTTCTCCCCAGAGGCTGCAGCTaGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTG | + |
Preference number: 3 (lower is better) Translates to: REGRLLLPRGCS*RAAAQRKHTGL Trigger: CAGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAGCCTCCCTTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR TCA 72 bp | CCCAGAGGAAGCACACAGGGCTGGGGGAGGCTGGCATaGACCAACTCCCGGCTCCAGAGCAGGAACCAAGGG | + |
Preference number: 3 (lower is better) Translates to: PRGSTQGWGRLA*TNSRLQSRNQG Trigger: CCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTGTGCTTCCTCTGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CCA 72 bp | GAGGGAGGGAGAGAGGACAGGAGAGAGAGGGAGGGATaGAGGGAGGGAGGGAAGGGAGGCTGCTTCTCCCCA | + |
Preference number: 3 (lower is better) Translates to: EGGREDRREREG*REGGKGGCFSP Trigger: TGGGGAGAAGCAGCCTCCCTTCCCTCCCTCCCTCCATCCCTCCCTCTCTCTCCTGTCCTCTCTCCCTCCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CAA 90 bp | AAGGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGCAGGTGGCCTGACCTaGCCACTGCGGGATCCTGTT | + |
Preference number: 3 (lower is better) Translates to: KAYVSLHTAGSRLGRRAGAGGLT*PLRDPV Trigger: AACAGGATCCCGCAGTGGCAAGGTCAGGCCACCTGC...TCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR GCA 72 bp | TGGCCTGACCTTGCCACTGCGGGATCCTGTTTCCTATaGTTCCACCCGAACACTGGTGGCTGTGGAGGGACC | + |
Preference number: 3 (lower is better) Translates to: WPDLATAGSCFL*FHPNTGGCGGT Trigger: GGTCCCTCCACAGCCACCAGTGTTCGGGTGGAAGCATAGGAAACAGGATCCCGCAGTGGCAAGGTCAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CCA 72 bp | CCCAGGGCCCAGCTCAACACTCTCGCTACCCCTCCCTaGCTTGAGAAAGGTCATGAGGAAGAGACAGGGGAG | + |
Preference number: 3 (lower is better) Translates to: PRAQLNTLATPP*LEKGHEEETGE Trigger: CTCCCCTGTCTCTTCCTCATGACCTTTCTCAAGCCAGGGAGGGGTAGCGAGAGTGTTGAGCTGGGCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CAA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACAGCAGGTGGCCTGACCTaGCCACTGCGGGATCCTGTT | + |
Preference number: 3 (lower is better) Translates to: RHTVGKARPSETARQPRTAGGLT*PLRDPV Trigger: AACAGGATCCCGCAGTGGCAAGGTCAGGCCACCTGC...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CCA 72 bp | GGGATCCTGTTTCCTATGCTTCCACCCGAACACTGGTaGCTGTGGAGGGACCTTCCGGAAAGACCACAGGGG | + |
Preference number: 3 (lower is better) Translates to: GILFPMLPPEHW*LWRDLPERPQG Trigger: CCCCTGTGGTCTTTCCGGAAGGTCCCTCCACAGCCACCAGTGTTCGGGTGGAAGCATAGGAAACAGGATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR-3UTR CAA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGTCACTTCTTTGGTCTTaGTGGCGGCTCAGCATGTGG | + |
Preference number: 3 (lower is better) Translates to: AERVQRVLRKSHLSRVGLSLLWS*WRLSMW Trigger: CCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR-3UTR CAA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACAAGACAGCTTCAGCTCTaGCCTCTCCACTGGAGGCTG | + |
Preference number: 3 (lower is better) Translates to: RHTVGKARPSETARQPRTRQLQL*PLHWRL Trigger: CAGCCTCCAGTGGAGAGGCAAGAGCTGAAGCTGTCT...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR CCA 72 bp | TGCGGGATCCTGTTTCCTATGCTTCCACCCGAACACTaGTGGCTGTGGAGGGACCTTCCGGAAAGACCACAG | + |
Preference number: 3 (lower is better) Translates to: CGILFPMLPPEH*WLWRDLPERPQ Trigger: CTGTGGTCTTTCCGGAAGGTCCCTCCACAGCCACCAGTGTTCGGGTGGAAGCATAGGAAACAGGATCCCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR CCA 72 bp | GGGGACAGAGAAAAGCCATCACTTCTTTGGTCTTTGTaGCGGCTCAGCATGTGGGTGGGAAGGAGGGCGGAG | + |
Preference number: 3 (lower is better) Translates to: GDREKPSLLWSL*RLSMWVGRRAE Trigger: CTCCGCCCTCCTTCCCACCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTCTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR-3UTR CAA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACACAGAAAGCCAGCAAGTaGCAGCAATCCCCACCCACA | + |
Preference number: 3 (lower is better) Translates to: RHTVGKARPSETARQPRTQKASK*QQSPPT Trigger: TGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTG...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
3UTR TCA 72 bp | TCAGCTCTTGCCTCTCCACTGGAGGCTGAAGGATTTTaGGAAGGGCCAGAGCCTTCCAGAGACACCGAAGCA | + |
Preference number: 3 (lower is better) Translates to: SALASPLEAEGF*EGPEPSRDTEA Trigger: TGCTTCGGTGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGGCAAGAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CCA 72 bp | AGAGCAGCAGGGGACAGAGAAAAGCCATCACTTCTTTaGTCTTTGTGGCGGCTCAGCATGTGGGTGGGAAGG | + |
Preference number: 3 (lower is better) Translates to: RAAGDREKPSLL*SLWRLSMWVGR Trigger: CCTTCCCACCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTCTGTCCCCTGCTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR TCA 72 bp | AAAGACAGCTTCAGCTCTTGCCTCTCCACTGGAGGCTaGAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGA | + |
Preference number: 3 (lower is better) Translates to: KDSFSSCLSTGG*RILRRARAFQR Trigger: TCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGGCAAGAGCTGAAGCTGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR GCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTGCACAACAGGGTCGATaGCACTGGTGGCCAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: SPQRLQLEGCRPEEAHRAAQQGR*HWWPGS Trigger: GCTTCCTGGCCACCAGTGGCATCGACCCTGTTGTGC...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | ACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAGCCACATGGGCGCCGTaGCAATGCGCTTCACCCGGT | + |
Preference number: 4 (lower is better) Translates to: TGLGEAGMNQLPAPEQEPATWAP*QCASPG Trigger: ACCGGGTGAAGCGCATTGCCACGGCGCCCATGTGGC...TGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCGCACCCCTTGCTCTCTaGCAGCCGGAAGCCGTTGCT | + |
Preference number: 4 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTAPLAL*QPEAVA Trigger: AGCAACGGCTTCCGGCTGCCAGAGAGCAAGGGGTGC...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGACACACGCTCCAGGTATaGGGGCAGCTCCACCTGGGG | + |
Preference number: 4 (lower is better) Translates to: GLCVSPHCRVQARQAGGRHTLQV*GQLHLG Trigger: CCCCAGGTGGAGCTGCCCCCATACCTGGAGCGTGTG...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | ACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCACACACGCTCCAGGTATaGGGGCAGCTCCACCTGGGG | + |
Preference number: 4 (lower is better) Translates to: TGLGEAGMNQLPAPEQEPHTLQV*GQLHLG Trigger: CCCCAGGTGGAGCTGCCCCCATACCTGGAGCGTGTG...TGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | TGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTGTAGAGCTGGATaGCCTGGGTCCACTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: CFSPEAAAGGLPPRGSTQGCRAG*PGSTAG Trigger: GCCAGCAGTGGACCCAGGCCATCCAGCTCTACAGCC...CTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CCCGGCGCCCCCGCTGCTCAGGCCTGTGATCCGATAGCCCATGTCCAGCAGCATCAGGGTCGATGCCACTaGTGGCCAGGAAGCAGTAGC | + |
Preference number: 4 (lower is better) Translates to: PGAPAAQACDPIAHVQQHQGRCH*WPGSSS Trigger: GCTACTGCTTCCTGGCCACCAGTGGCATCGACCCTG...ATGCTGCTGGACATGGGCTATCGGATCACAGGCCTGAGCAGCGGGGGCGCCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTTCATGCGCCGCTGGTTaGCCTGAGATGCACCCTCCA | + |
Preference number: 4 (lower is better) Translates to: SPQRLQLEGCRPEEAHRASCAAG*PEMHPP Trigger: TGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGA...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCATCGCCTCCAGGGGGTTaGCATTCATGCGCCGCTGGT | + |
Preference number: 4 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPSPPGG*HSCAAG Trigger: ACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGA...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR TCA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCTCCACCTGGGGGCTaGTGCACCCCTTGCTCTCTG | + |
Preference number: 4 (lower is better) Translates to: AERVQRVLRKSHLSRVGLAPPGG*CTPCSL Trigger: CAGAGAGCAAGGGGTGCATCAGCCCCCAGGTGGAGC...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACACGCCGCTGGTTGGCCTaGGATGCACCCTCCATATCT | + |
Preference number: 4 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTRRWLA*DAPSIS Trigger: AGATATGGAGGGTGCATCTCAGGCCAACCAGCGGCG...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCCGCTGCTCAGGCCTGTaGTCCGATAGCCCATGTCCA | + |
Preference number: 4 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTRCSGL*SDSPCP Trigger: TGGACATGGGCTATCGGATCACAGGCCTGAGCAGCG...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR GCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCACGGTCACAGAAGGTATaGACGCCTGCGGAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPRSQKV*TPAEGL Trigger: GAGCCCTTCCGCAGGCGTGCATACCTTCTGTGACCG...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTGGCCAGACGGAAGTGTaGCTTCAGGTGGCAAGGGTT | + |
Preference number: 4 (lower is better) Translates to: SPQRLQLEGCRPEEAHRAGQTEV*LQVARV Trigger: AACCCTTGCCACCTGAAGGCACACTTCCGTCTGGCC...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGTCGATGCCACTGGTaGCCAGGAAGCAGTAGCTGG | + |
Preference number: 4 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTGRCHW*PGSSSW Trigger: CCAGCTACTGCTTCCTGGCCACCAGTGGCATCGACC...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTGCTCCACCTGGGGGCTaGTGCACCCCTTGCTCTCTG | + |
Preference number: 4 (lower is better) Translates to: PPRHTVGKARPSETARQPAPPGG*CTPCSL Trigger: CAGAGAGCAAGGGGTGCATCAGCCCCCAGGTGGAGC...AGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCATTAGGGAGATGGCCTTaGGGCAGTCCCGGAGGGCAT | + |
Preference number: 4 (lower is better) Translates to: TGLGEAGMNQLPAPEQEPLGRWP*GSPGGH Trigger: ATGCCCTCCGGGACTGCCTCAAGGCCATCTCCCTAA...TGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGTGGGCGCCGTGGCAATaGGCTTCACCCGGTTTGTGT | + |
Preference number: 4 (lower is better) Translates to: GMNQLPAPEQEPRGQRERWAPWQ*ASPGLC Trigger: ACACAAACCGGGTGAAGCGCATTGCCACGGCGCCCA...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAATGGACTCATCCCCCTaGAGCACTCGGACGAGGTTG | + |
Preference number: 4 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPMDSSP*STRTRL Trigger: CAACCTCGTCCGAGTGCTGCAGGGGGATGAGTCCAT...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGGGGGGTTGGCATTCATaGGCCGCTGGTTGGCCTGAG | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRGGWHS*AAGWPE Trigger: CTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCC...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR CCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACACACACAATGGTGTGCTaGTCGTCGGAACCAGACGCC | + |
Preference number: 4 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTHTMVC*SSEPDA Trigger: GGCGTCTGGTTCCGACGACCAGCACACCATTGTGTG...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCACCAGGAAGCAGTAGCTaGGATGGGGCTGCAAGCAGT | + |
Preference number: 4 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPPGSSS*DGAASS Trigger: ACTGCTTGCAGCCCCATCCCAGCTACTGCTTCCTGG...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACAGGCCGGCACTGCACCTaGCCCTCTGCGCTGTCCTCG | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTGRHCT*PSALSS Trigger: CGAGGACAGCGCAGAGGGCCAGGTGCAGTGCCGGCC...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR TCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGTTAGGGAGATGGCCTTaGGGCAGTCCCGGAGGGCAT | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLALGRWP*GSPGGH Trigger: ATGCCCTCCGGGACTGCCTCAAGGCCATCTCCCTAA...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGCCACAACTCGGCCTGTaGGGTCTTCACTCTCTGGTC | + |
Preference number: 4 (lower is better) Translates to: GMNQLPAPEQEPRGQRERPQLGL*GLHSLV Trigger: GACCAGAGAGTGAAGACCTCACAGGCCGAGTTGTGG...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCATCCCACACAATGGTGTaGTGGTCGTCGGAACCAGAC | + |
Preference number: 4 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPSHTMV*WSSEPD Trigger: GTCTGGTTCCGACGACCAGCACACCATTGTGTGGGA...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCCACCTTGGAGTCAGCTaGCCCCGTGATCAAAATGCG | + |
Preference number: 4 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTHLGVS*PRDQNA Trigger: CGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTG...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGTGGGCGCCGTGGCAATaGGCTTCACCCGGTTTGTGT | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRWAPWQ*ASPGLC Trigger: ACACAAACCGGGTGAAGCGCATTGCCACGGCGCCCA...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAGAAGGTATGCACGCCTaGGGAAGGGCTCTGCCTCAT | + |
Preference number: 4 (lower is better) Translates to: TGLGEAGMNQLPAPEQEPEGMHA*GRALPH Trigger: ATGAGGCAGAGCCCTTCCGCAGGCGTGCATACCTTC...TGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGCGGTCACAGAAGGTATaGACGCCTGCGGAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLARSQKV*TPAEGL Trigger: GAGCCCTTCCGCAGGCGTGCATACCTTCTGTGACCG...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR GCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTGCTTCATTGGCCTGCTaGTTCACACGCTCCAGGTAT | + |
Preference number: 4 (lower is better) Translates to: SPQRLQLEGCRPEEAHRAASLAC*FTRSRY Trigger: ATACCTGGAGCGTGTGAAGCAGCAGGCCAATGAAGC...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGCTTCATTGGCCTaGTGCTTCACACGCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTKASLA*CFTRSR Trigger: CCTGGAGCGTGTGAAGCAGCAGGCCAATGAAGCCTT...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR GCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAAAGGCTTCATTGGCCTaGTGCTTCACACGCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTKASLA*CFTRSR Trigger: CCTGGAGCGTGTGAAGCAGCAGGCCAATGAAGCCTT...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR GCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGAGCACTGCTGTGGGCCTaGTCTGGGAACTTCCCTTTG | + |
Preference number: 4 (lower is better) Translates to: GLCVSPHCRVQARQAGGRALLWA*SGNFPL Trigger: CAAAGGGAAGTTCCCAGAGCAGGCCCACAGCAGTGC...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCATATCCGTGGTGGTGTTaGAGTGCCCACAGTAGCGGA | + |
Preference number: 4 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPYPWWC*SAHSSG Trigger: TCCGCTACTGTGGGCACTGCAACACCACCACGGATA...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | ACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAGTGGGTCCCACACAATaGTGTGCTGGTCGTCGGAAC | + |
Preference number: 4 (lower is better) Translates to: TGLGEAGMNQLPAPEQEPVGPTQ*CAGRRN Trigger: GTTCCGACGACCAGCACACCATTGTGTGGGACCCAC...TGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTCTTCTTGTGGTGCAGTaGGTCCCACACAATGGTGTG | + |
Preference number: 4 (lower is better) Translates to: SPQRLQLEGCRPEEAHRALLVVQ*VPHNGV Trigger: CACACCATTGTGTGGGACCCACTGCACCACAAGAAG...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGTCACAAAGGGCCCACTaGCCCCTACTGCCAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLASQRAH*PLLPGS Trigger: ACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGA...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | ACCCCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGGCACCCCTTGCTCTCTaGCAGCCGGAAGCCGTTGCT | + |
Preference number: 4 (lower is better) Translates to: TPPRHTVGKARPSETARQAPLAL*QPEAVA Trigger: AGCAACGGCTTCCGGCTGCCAGAGAGCAAGGGGTGC...CTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGGCCTGGGTCCACTGCTaGCAGGCGAAGGCTTCATTG | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRAWVHC*QAKASL Trigger: CAATGAAGCCTTCGCCTGCCAGCAGTGGACCCAGGC...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR CCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGGCTTCGAAGGCGAACTaGACCACCACCACCACCAGC | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRASKAN*TTTTTS Trigger: GCTGGTGGTGGTGGTGGTCCAGTTCGCCTTCGAAGC...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGACCAGGAAGCAGTAGCTaGGATGGGGCTGCAAGCAGT | + |
Preference number: 4 (lower is better) Translates to: GLCVSPHCRVQARQAGGRPGSSS*DGAASS Trigger: ACTGCTTGCAGCCCCATCCCAGCTACTGCTTCCTGG...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCGTCAATCAGCACCTCTaGGTGTTTGCTGTTCTCCCG | + |
Preference number: 4 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTVNQHL*VFAVLP Trigger: CGGGAGAACAGCAAACACTCAGAGGTGCTGATTGAC...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGCGGAAGCCGTTGCTGTaGAGGTGTAGGCCATTCGAC | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLARKPLL*RCRPFD Trigger: GTCGAATGGCCTACACCTTCACAGCAACGGCTTCCG...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGAAGAAAAGGGCAGCTGTaGTGTCCCGGCCTAATGCGT | + |
Preference number: 4 (lower is better) Translates to: GLCVSPHCRVQARQAGGRRKGQL*CPGLMR Trigger: ACGCATTAGGCCGGGACATCACAGCTGCCCTTTTCT...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGCCCACTGGCCCCTACTaGCAGGCAGTTGTTATCCTG | + |
Preference number: 4 (lower is better) Translates to: AERVQRVLRKSHLSRVGLPTGPY*QAVVIL Trigger: CAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGG...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGGAAGGTATGCACGCCTaGGGAAGGGCTCTGCCTCAT | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLAEGMHA*GRALPH Trigger: ATGAGGCAGAGCCCTTCCGCAGGCGTGCATACCTTC...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | TGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGCTTCATTGGCCTGCTaGTTCACACGCTCCAGGTAT | + |
Preference number: 4 (lower is better) Translates to: CFSPEAAAGGLPPRGSTQASLAC*FTRSRY Trigger: ATACCTGGAGCGTGTGAAGCAGCAGGCCAATGAAGC...CTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGATGCGTCACATGCACTaGTGTGGGCCTGCTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: AERVQRVLRKSHLSRVGLMRHMH*CGPALG Trigger: TCCCAGAGCAGGCCCACAGCAGTGCATGTGACGCAT...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGATGGACTCATCCCCCTaGAGCACTCGGACGAGGTTG | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRMDSSP*STRTRL Trigger: CAACCTCGTCCGAGTGCTGCAGGGGGATGAGTCCAT...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACCCCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGGCACAACAGGGTCGATaGCACTGGTGGCCAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: TPPRHTVGKARPSETARQAQQGR*HWWPGS Trigger: GCTTCCTGGCCACCAGTGGCATCGACCCTGTTGTGC...CTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACATCACAAAGGGCCCACTaGCCCCTACTGCCAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: TFRKDHRGASPGVRRVATSQRAH*PLLPGS Trigger: ACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGA...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTGCCTGGGTCCACTGCTaGCAGGCGAAGGCTTCATTG | + |
Preference number: 4 (lower is better) Translates to: PPRHTVGKARPSETARQPAWVHC*QAKASL Trigger: CAATGAAGCCTTCGCCTGCCAGCAGTGGACCCAGGC...AGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACAAGTCAGCTGCCCCCGTaGTCAAAATGCGGTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: TFRKDHRGASPGVRRVATSQLPP*SKCGLQ Trigger: CTGGAGACCGCATTTTGATCACGGGGGCAGCTGACT...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | AAGGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGACTGTGCCATTGGGGCTaGAGGTCACATAGGTGGCAA | + |
Preference number: 4 (lower is better) Translates to: KAYVSLHTAGSRLGRRAGLCHWG*RSHRWQ Trigger: TTGCCACCTATGTGACCTTCAGCCCCAATGGCACAG...TCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCTCTCCTCCCATGTTaGCTAGCAGCTCTGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: AERVQRVLRKSHLSRVGLALLPC*LAALCH Trigger: ATGGCACAGAGCTGCTAGTCAACATGGGAGGAGAGC...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACACGGAAGCCGTTGCTGTaGAGGTGTAGGCCATTCGAC | + |
Preference number: 4 (lower is better) Translates to: TFRKDHRGASPGVRRVATRKPLL*RCRPFD Trigger: GTCGAATGGCCTACACCTTCACAGCAACGGCTTCCG...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | TGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGAGAAATTGGCCTCCTTaGTATCCGTGGTGGTGTTGC | + |
Preference number: 4 (lower is better) Translates to: CFSPEAAAGGLPPRGSTQRNWPP*YPWWCC Trigger: GCAACACCACCACGGATATCAAGGAGGCCAATTTCT...CTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ACCCCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGGGGGCTGCAAGCAGTTaGCAATGGACTCATCCCCCT | + |
Preference number: 4 (lower is better) Translates to: TPPRHTVGKARPSETARQGAASS*QWTHPP Trigger: AGGGGGATGAGTCCATTGTCAACTGCTTGCAGCCCC...CTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGAGCAGCTTCTTGTGGTaGAGTGGGTCCCACACAATG | + |
Preference number: 4 (lower is better) Translates to: GMNQLPAPEQEPRGQRERSSFLW*SGSHTM Trigger: CATTGTGTGGGACCCACTGCACCACAAGAAGCTGCT...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGCACCTTGGAGTCAGCTaGCCCCGTGATCAAAATGCG | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLAHLGVS*PRDQNA Trigger: CGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTG...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGACATAATACTGCGCTaGACCGTCCGGAAGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: AERVQRVLRKSHLSRVGLDIILR*TVRKGL Trigger: AAGCCCCTTCCGGACGGTGCAGCGCAGTATTATGTC...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGGACAGCAGCTTCTTGTaGTGCAGTGGGTCCCACACA | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRDSSFL*CSGSHT Trigger: TGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTC...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCCACATGGGCGCCGTaGCAATGCGCTTCACCCGGT | + |
Preference number: 4 (lower is better) Translates to: LGTVKGQSARESESQQVAATWAP*QCASPG Trigger: ACCGGGTGAAGCGCATTGCCACGGCGCCCATGTGGC...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAAAGTGTGCCTTCAGGTaGCAAGGGTTTAGGGAGATG | + |
Preference number: 4 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTKCAFR*QGFREM Trigger: CATCTCCCTAAACCCTTGCCACCTGAAGGCACACTT...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGTCACATGCACTGCTGTaGGCCTGCTCTGGGAACTTC | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRSHALL*ACSGNF Trigger: GAAGTTCCCAGAGCAGGCCCACAGCAGTGCATGTGA...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGGCACTCGGACGAGGTTaGTGGTCTCCTTTTCCCAGA | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLAALGRG*WSPFPR Trigger: TCTGGGAAAAGGAGACCACCAACCTCGTCCGAGTGC...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR TCA 90 bp | AAGGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGTCAATCAGCACCTCTaGGTGTTTGCTGTTCTCCCG | + |
Preference number: 4 (lower is better) Translates to: KAYVSLHTAGSRLGRRAGVNQHL*VFAVLP Trigger: CGGGAGAACAGCAAACACTCAGAGGTGCTGATTGAC...TCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACAGCTCTCCTCCCATGTTaGCTAGCAGCTCTGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: TFRKDHRGASPGVRRVATALLPC*LAALCH Trigger: ATGGCACAGAGCTGCTAGTCAACATGGGAGGAGAGC...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACATCCCACACAATGGTGTaGTGGTCGTCGGAACCAGAC | + |
Preference number: 4 (lower is better) Translates to: TFRKDHRGASPGVRRVATSHTMV*WSSEPD Trigger: GTCTGGTTCCGACGACCAGCACACCATTGTGTGGGA...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACAGATAAGCCCATCCTCTaGGGCGCTCCAGAACGTGTT | + |
Preference number: 4 (lower is better) Translates to: TFRKDHRGASPGVRRVATDKPIL*GAPERV Trigger: AACACGTTCTGGAGCGCCGCAGAGGATGGGCTTATC...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGCTGAGATGGAGTCCTTaGGACTTGTGCTTCGAAGGC | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLALRWSP*DLCFEG Trigger: GCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAG...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTTATCCGTGGTGGTGTTaGAGTGCCCACAGTAGCGGA | + |
Preference number: 4 (lower is better) Translates to: PPRHTVGKARPSETARQPYPWWC*SAHSSG Trigger: TCCGCTACTGTGGGCACTGCAACACCACCACGGATA...AGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
||
CDS-3UTR GCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACACTGCACCTGGCCCTCTaGGCTGTCCTCGTCATCAGA | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTLHLAL*AVLVIR Trigger: TCTGATGACGAGGACAGCGCAGAGGGCCAGGTGCAG...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR CCA 90 bp | ACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCATGTGTCCTGTGTGCATaGACAGCAGCTTCTTGTGGT | + |
Preference number: 4 (lower is better) Translates to: TGLGEAGMNQLPAPEQEPCVLCA*TAASCG Trigger: ACCACAAGAAGCTGCTGTCCATGCACACAGGACACA...TGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGATGTGTCCTGTGTGCATaGACAGCAGCTTCTTGTGGT | + |
Preference number: 4 (lower is better) Translates to: GLCVSPHCRVQARQAGGRCVLCA*TAASCG Trigger: ACCACAAGAAGCTGCTGTCCATGCACACAGGACACA...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACATTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATC | + |
Preference number: 4 (lower is better) Translates to: LLLPRGCSWRAAAQRKHTFTRFV*SPNMWI Trigger: GATCCACATGTTTGGAGACCACACAAACCGGGTGAA...TGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGCAGTTGTTATCCTaGGGGTTGACGGTGAGGCAC | + |
Preference number: 4 (lower is better) Translates to: PPRHTVGKARPSETARQPRQLLS*GLTVRH Trigger: GTGCCTCACCGTCAACCCCCAGGATAACAACTGCCT...AGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCAGAGGGAGAGGTGGACTTCCACGGAGTaGCATTTTCTAGGCAAGAGG | + |
Preference number: 4 (lower is better) Translates to: GMNQLPAPEQEPRGQRERWTSTE*HFLGKR Trigger: CCTCTTGCCTAGAAAATGCCACTCCGTGGAAGTCCA...CCTCTCCCTCTGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGGCTGTAGAGCTGGATaGCCTGGGTCCACTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: LGTVKGQSARESESQQVAGCRAG*PGSTAG Trigger: GCCAGCAGTGGACCCAGGCCATCCAGCTCTACAGCC...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGCACCATTTCGTCTTCTaGGATGGAGTCCTTGCGACT | + |
Preference number: 4 (lower is better) Translates to: AERVQRVLRKSHLSRVGLHHFVF*DGVLAT Trigger: AGTCGCAAGGACTCCATCTCAGAAGACGAAATGGTG...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CCTCTCCACTGGAGGCTGAAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGACACGCCGCTGGTTGGCCTaGGATGCACCCTCCATATCT | + |
Preference number: 4 (lower is better) Translates to: PLHWRLKDFEKGQSLPETRRWLA*DAPSIS Trigger: AGATATGGAGGGTGCATCTCAGGCCAACCAGCGGCG...TGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | GCTGGGGCTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCACTGAGATGGAGTCCTTaGGACTTGTGCTTCGAAGGC | + |
Preference number: 4 (lower is better) Translates to: AGAGDSQGTISPRVRKPALRWSP*DLCFEG Trigger: GCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAG...TGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAGCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | TGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGTGGTCTCCAAACATGTaGATCGTCTCCTTTACCGTA | + |
Preference number: 4 (lower is better) Translates to: CFSPEAAAGGLPPRGSTQWSPNM*IVSFTV Trigger: TACGGTAAAGGAGACGATCCACATGTTTGGAGACCA...CTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CCTCTCCACTGGAGGCTGAAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGACAACAGTTGACACAGCCTaGGTGTCCCTGAAGCTCCGC | + |
Preference number: 4 (lower is better) Translates to: PLHWRLKDFEKGQSLPETTVDTA*VSLKLR Trigger: GCGGAGCTTCAGGGACACTCAGGCTGTGTCAACTGT...TGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CCTCTCCACTGGAGGCTGAAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGACACCCACTGGCCCCTACTaGCAGGCAGTTGTTATCCTG | + |
Preference number: 4 (lower is better) Translates to: PLHWRLKDFEKGQSLPETPTGPY*QAVVIL Trigger: CAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGG...TGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACAGACATAATACTGCGCTaGACCGTCCGGAAGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTDIILR*TVRKGL Trigger: AAGCCCCTTCCGGACGGTGCAGCGCAGTATTATGTC...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CCTCTCCACTGGAGGCTGAAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGACAGCAGCCGGAAGCCGTTaGTGTGAAGGTGTAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: PLHWRLKDFEKGQSLPETAAGSR*CEGVGH Trigger: ATGGCCTACACCTTCACAGCAACGGCTTCCGGCTGC...TGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CCTCTCCACTGGAGGCTGAAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGACAATGCGTCACATGCACTaGTGTGGGCCTGCTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: PLHWRLKDFEKGQSLPETMRHMH*CGPALG Trigger: TCCCAGAGCAGGCCCACAGCAGTGCATGTGACGCAT...TGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACAACCACCACCACCAGCTaGCTTCTTCTCCTCACCATC | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTTTTTS*LLLLTI Trigger: GATGGTGAGGAGAAGAAGGCAGCTGGTGGTGGTGGT...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCACACACAATGGTGTGCTaGTCGTCGGAACCAGACGCC | + |
Preference number: 4 (lower is better) Translates to: LGTVKGQSARESESQQVAHTMVC*SSEPDA Trigger: GGCGTCTGGTTCCGACGACCAGCACACCATTGTGTG...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGTGGGTCCCACACAATaGTGTGCTGGTCGTCGGAAC | + |
Preference number: 4 (lower is better) Translates to: LGTVKGQSARESESQQVAVGPTQ*CAGRRN Trigger: GTTCCGACGACCAGCACACCATTGTGTGGGACCCAC...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGATGGTCTCCAAACATGTaGATCGTCTCCTTTACCGTA | + |
Preference number: 4 (lower is better) Translates to: GLCVSPHCRVQARQAGGRWSPNM*IVSFTV Trigger: TACGGTAAAGGAGACGATCCACATGTTTGGAGACCA...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACAAGGCAGTTGTTATCCTaGGGGTTGACGGTGAGGCAC | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTRQLLS*GLTVRH Trigger: GTGCCTCACCGTCAACCCCCAGGATAACAACTGCCT...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACCCCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGTGGACTTCCACGGAGTaGCATTTTCTAGGCAAGAGG | + |
Preference number: 4 (lower is better) Translates to: TPPRHTVGKARPSETARQWTSTE*HFLGKR Trigger: CCTCTTGCCTAGAAAATGCCACTCCGTGGAAGTCCA...CTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACAGCTGTGGGCCTGCTCTaGGAACTTCCCTTTGAAGTC | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTAVGLL*ELPFEV Trigger: GACTTCAAAGGGAAGTTCCCAGAGCAGGCCCACAGC...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACATCACATGCACTGCTGTaGGCCTGCTCTGGGAACTTC | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTSHALL*ACSGNF Trigger: GAAGTTCCCAGAGCAGGCCCACAGCAGTGCATGTGA...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTGCTTCGAAGGCGAACTaGACCACCACCACCACCAGC | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSASKAN*TTTTTS Trigger: GCTGGTGGTGGTGGTGGTCCAGTTCGCCTTCGAAGC...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGTTTCGTCTTCTGAGATaGAGTCCTTGCGACTTGTGC | + |
Preference number: 4 (lower is better) Translates to: TLTLLGAEQQKARLLPQRFRLLR*SPCDLC Trigger: GCACAAGTCGCAAGGACTCCATCTCAGAAGACGAAA...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAGGTCGATGCCACTGGTaGCCAGGAAGCAGTAGCTGG | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQGRCHW*PGSSSW Trigger: CCAGCTACTGCTTCCTGGCCACCAGTGGCATCGACC...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAACAGGGTCGATGCCACTaGTGGCCAGGAAGCAGTAGC | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQQGRCH*WPGSSS Trigger: GCTACTGCTTCCTGGCCACCAGTGGCATCGACCCTG...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTTCATGCGCCGCTGGTTaGCCTGAGATGCACCCTCCA | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSSCAAG*PEMHPP Trigger: TGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGA...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAACAGTTGACACAGCCTaGGTGTCCCTGAAGCTCCGC | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQTVDTA*VSLKLR Trigger: GCGGAGCTTCAGGGACACTCAGGCTGTGTCAACTGT...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCTGTGCCATTGGGGCTaGAGGTCACATAGGTGGCAA | + |
Preference number: 4 (lower is better) Translates to: QGTISPRVRKPASCSNPHLCHWG*RSHRWQ Trigger: TTGCCACCTATGTGACCTTCAGCCCCAATGGCACAG...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTGGGGCTGCAAGCAGTTaGCAATGGACTCATCCCCCT | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSGAASS*QWTHPP Trigger: AGGGGGATGAGTCCATTGTCAACTGCTTGCAGCCCC...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAACCACAACTCGGCCTGTaGGGTCTTCACTCTCTGGTC | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQPQLGL*GLHSLV Trigger: GACCAGAGAGTGAAGACCTCACAGGCCGAGTTGTGG...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTGCAGCCGGAAGCCGTTaGTGTGAAGGTGTAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSAAGSR*CEGVGH Trigger: ATGGCCTACACCTTCACAGCAACGGCTTCCGGCTGC...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAGGCCAGACGGAAGTGTaGCTTCAGGTGGCAAGGGTT | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQGQTEV*LQVARV Trigger: AACCCTTGCCACCTGAAGGCACACTTCCGTCTGGCC...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCTGTGGGCCTGCTCTaGGAACTTCCCTTTGAAGTC | + |
Preference number: 4 (lower is better) Translates to: LGTVKGQSARESESQQVAAVGLL*ELPFEV Trigger: GACTTCAAAGGGAAGTTCCCAGAGCAGGCCCACAGC...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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3UTR CAA 72 bp | CAGAGCAGCAGGGGACAGAGAAAAGCCATCACTTCTTaGGTCTTTGTGGCGGCTCAGCATGTGGGTGGGAAG | + |
Preference number: 4 (lower is better) Translates to: QSSRGQRKAITS*VFVAAQHVGGK Trigger: CTTCCCACCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTCTGTCCCCTGCTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTCATGAGGCAGGAACTTaGCAGAGAAGATATTTGCTG | + |
Preference number: 4 (lower is better) Translates to: PPRHTVGKARPSETARQPHEAGT*QRRYLL Trigger: CAGCAAATATCTTCTCTGTCAAGTTCCTGCCTCATG...AGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTAGAAAAGGGCAGCTGTaGTGTCCCGGCCTAATGCGT | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSRKGQL*CPGLMR Trigger: ACGCATTAGGCCGGGACATCACAGCTGCCCTTTTCT...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAAGCAGCTTCTTGTGGTaGAGTGGGTCCCACACAATG | + |
Preference number: 4 (lower is better) Translates to: LGTVKGQSARESESQQVASSFLW*SGSHTM Trigger: CATTGTGTGGGACCCACTGCACCACAAGAAGCTGCT...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTGATAAGCCCATCCTCTaGGGCGCTCCAGAACGTGTT | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSDKPIL*GAPERV Trigger: AACACGTTCTGGAGCGCCGCAGAGGATGGGCTTATC...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTACCACCACCACCAGCTaGCTTCTTCTCCTCACCATC | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSTTTTS*LLLLTI Trigger: GATGGTGAGGAGAAGAAGGCAGCTGGTGGTGGTGGT...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTGACAGCAGCTTCTTGTaGTGCAGTGGGTCCCACACA | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSDSSFL*CSGSHT Trigger: TGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTC...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGCTCATGCTCTTTCTGTaGTTGTGGATCATTCGAATG | + |
Preference number: 4 (lower is better) Translates to: ERVQRVLRKSHLSRVGLALMLFL*LWIIRM Trigger: CATTCGAATGATCCACAACCACAGAAAGAGCATGAG...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CCTCTCCACTGGAGGCTGAAGGATTTTGAGAAGGGCCAGAGCCTTCCAGAGACACACCATTTCGTCTTCTaGGATGGAGTCCTTGCGACT | + |
Preference number: 4 (lower is better) Translates to: PLHWRLKDFEKGQSLPETHHFVF*DGVLAT Trigger: AGTCGCAAGGACTCCATCTCAGAAGACGAAATGGTG...TGTCTCTGGAAGGCTCTGGCCCTTCTCAAAATCCTTCAGCCTCCAGTGGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR TCA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACAGAAATTGGCCTCCTTaGTATCCGTGGTGGTGTTGC | + |
Preference number: 4 (lower is better) Translates to: QGTISPRVRKPASCSNPHRNWPP*YPWWCC Trigger: GCAACACCACCACGGATATCAAGGAGGCCAATTTCT...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTGCTGTGTGTCCTGTGTaGATGGACAGCAGCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSAVCPV*MDSSFL Trigger: CAAGAAGCTGCTGTCCATGCACACAGGACACACAGC...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACATTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATC | + |
Preference number: 4 (lower is better) Translates to: RHTVGKARPSETARQPRTFTRFV*SPNMWI Trigger: GATCCACATGTTTGGAGACCACACAAACCGGGTGAA...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACACAAGAGGAAGGTATATaGCCGTTGCTTGTAAGTCAA | + |
Preference number: 4 (lower is better) Translates to: TFRKDHRGASPGVRRVATQEEGI*PLLVSQ Trigger: TTGACTTACAAGCAACGGCCATATACCTTCCTCTTG...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAAGTGTGCCTTCAGGTaGCAAGGGTTTAGGGAGATG | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQKCAFR*QGFREM Trigger: CATCTCCCTAAACCCTTGCCACCTGAAGGCACACTT...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACTTTCGTCTTCTGAGATaGAGTCCTTGCGACTTGTGC | + |
Preference number: 4 (lower is better) Translates to: QGTISPRVRKPASCSNPHFRLLR*SPCDLC Trigger: GCACAAGTCGCAAGGACTCCATCTCAGAAGACGAAA...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACTGTACTGAGCATTGCTaGCAAAGAAATTGGCCTCCT | + |
Preference number: 4 (lower is better) Translates to: QGTISPRVRKPASCSNPHCTEHC*QRNWPP Trigger: AGGAGGCCAATTTCTTTGGCAGCAATGCTCAGTACA...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR TCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAACATGAGGCAGGAACTTaGCAGAGAAGATATTTGCTG | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQHEAGT*QRRYLL Trigger: CAGCAAATATCTTCTCTGTCAAGTTCCTGCCTCATG...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR GCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAACAATGTACTGAGCATTaGTGCCAAAGAAATTGGCCT | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQQCTEH*CQRNWP Trigger: AGGCCAATTTCTTTGGCAGCAATGCTCAGTACATTG...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR CCA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTCTCATGCTCTTTCTGTaGTTGTGGATCATTCGAATG | + |
Preference number: 4 (lower is better) Translates to: ISPRVRKPASCSNPHPQSLMLFL*LWIIRM Trigger: CATTCGAATGATCCACAACCACAGAAAGAGCATGAG...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CCA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAACAAGAGGAAGGTATATaGCCGTTGCTTGTAAGTCAA | + |
Preference number: 4 (lower is better) Translates to: TISPRVRKPASCSNPHPQQEEGI*PLLVSQ Trigger: TTGACTTACAAGCAACGGCCATATACCTTCCTCTTG...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | TGCTTCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGGCTGATGCACCCCTaGCTCTCTGGCAGCCGGAAG | + |
Preference number: 5 (lower is better) Translates to: CFSPEAAAGGLPPRGSTQGLMHP*LSGSRK Trigger: CTTCCGGCTGCCAGAGAGCAAGGGGTGCATCAGCCC...CTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGAAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCTTGACGGTGAGGCACTaGGCCTCCACCATCGGGCCA | + |
Preference number: 5 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTLTVRH*ASTIGP Trigger: TGGCCCGATGGTGGAGGCCAAGTGCCTCACCGTCAA...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCATTGACGGTGAGGCACTaGGCCTCCACCATCGGGCCA | + |
Preference number: 5 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPLTVRH*ASTIGP Trigger: TGGCCCGATGGTGGAGGCCAAGTGCCTCACCGTCAA...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | TCTCCCCAGAGGCTGCAGCTGGAGGGCTGCCGCCCAGAGGAAGCACACAGGGCTTTTAGGGAGATGGCCTaGAGGCAGTCCCGGAGGGCA | + |
Preference number: 5 (lower is better) Translates to: SPQRLQLEGCRPEEAHRAFREMA*RQSRRA Trigger: TGCCCTCCGGGACTGCCTCAAGGCCATCTCCCTAAA...AGCCCTGTGTGCTTCCTCTGGGCGGCAGCCCTCCAGCTGCAGCCTCTGGGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGTCGTGGACGTGCACCTaGGAGTCAGCTGCCCCCGTG | + |
Preference number: 5 (lower is better) Translates to: AERVQRVLRKSHLSRVGLSWTCT*ESAAPV Trigger: CACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGA...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | AAGGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGGGCTGATGCACCCCTaGCTCTCTGGCAGCCGGAAG | + |
Preference number: 5 (lower is better) Translates to: KAYVSLHTAGSRLGRRAGGLMHP*LSGSRK Trigger: CTTCCGGCTGCCAGAGAGCAAGGGGTGCATCAGCCC...TCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 90 bp | CTCACAAAGGGCCCACTGGCCCCTACTGCCAGGCAGTTGTTATCCTaGGGGTTGACGGTGAGGCACTTGGCCTCCACCATCGGGCCACAG | + |
Preference number: 5 (lower is better) Translates to: LTKGPLAPTARQLLS*GLTVRHLASTIGPQ Trigger: CTGTGGCCCGATGGTGGAGGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGAAGCACTCGGACGAGGTaGGTGGTCTCCTTTTCCCAG | + |
Preference number: 5 (lower is better) Translates to: GLCVSPHCRVQARQAGGRSTRTR*VVSFSQ Trigger: CTGGGAAAAGGAGACCACCAACCTCGTCCGAGTGCT...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS TCA 90 bp | AGCTCCGCCTCCAGGCCCAGCCGTCGGATAAAGGGGTCTGTGACATaGTATCGCCGTTCAAAGCTCAGGGCACCCCGCTCCTTGACTTGC | + |
Preference number: 5 (lower is better) Translates to: SSASRPSRRIKGSVT*YRRSKLRAPRSLTC Trigger: GCAAGTCAAGGAGCGGGGTGCCCTGAGCTTTGAACGGCGATATCATGTCACAGACCCCTTTATCCGACGGCTGGGCCTGGAGGCGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 90 bp | GGGCTGATGCACCCCTTGCTCTCTGGCAGCCGGAAGCCGTTGCTGTaGAGGTGTAGGCCATTCGACACGCCGTTGGACACCCCGTTAGTA | + |
Preference number: 5 (lower is better) Translates to: GLMHPLLSGSRKPLL*RCRPFDTPLDTPLV Trigger: TACTAACGGGGTGTCCAACGGCGTGTCGAATGGCCTACACCTTCACAGCAACGGCTTCCGGCTGCCAGAGAGCAAGGGGTGCATCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 90 bp | GACGGAAGTGTGCCTTCAGGTGGCAAGGGTTTAGGGAGATGGCCTTaGGGCAGTCCCGGAGGGCATCATAGTGGTCCCCGTCCCACTTGC | + |
Preference number: 5 (lower is better) Translates to: DGSVPSGGKGLGRWP*GSPGGHHSGPRPTC Trigger: GCAAGTGGGACGGGGACCACTATGATGCCCTCCGGGACTGCCTCAAGGCCATCTCCCTAAACCCTTGCCACCTGAAGGCACACTTCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 90 bp | CACTGGTGGCCAGGAAGCAGTAGCTGGGATGGGGCTGCAAGCAGTTaGCAATGGACTCATCCCCCTGCAGCACTCGGACGAGGTTGGTGG | + |
Preference number: 5 (lower is better) Translates to: HWWPGSSSWDGAASS*QWTHPPAALGRGWW Trigger: CCACCAACCTCGTCCGAGTGCTGCAGGGGGATGAGTCCATTGTCAACTGCTTGCAGCCCCATCCCAGCTACTGCTTCCTGGCCACCAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | TGCGCTGCACCGTCCGGAAGGGGCTTCTGTCGGTCACAGAAGGTATaGACGCCTGCGGAAGGGCTCTGCCTCATGCTCTTTCTGTGGTTG | + |
Preference number: 5 (lower is better) Translates to: CAAPSGRGFCRSQKV*TPAEGLCLMLFLWL Trigger: CAACCACAGAAAGAGCATGAGGCAGAGCCCTTCCGCAGGCGTGCATACCTTCTGTGACCGACAGAAGCCCCTTCCGGACGGTGCAGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | CTTCACTCTCTGGTCGTGGGTTCCACAGTCGCACAACAGGGTCGATaGCACTGGTGGCCAGGAAGCAGTAGCTGGGATGGGGCTGCAAGC | + |
Preference number: 5 (lower is better) Translates to: LHSLVVGSTVAQQGR*HWWPGSSSWDGAAS Trigger: GCTTGCAGCCCCATCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGACCCTGTTGTGCGACTGTGGAACCCACGACCAGAGAGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGATGGACAGCAGCTTCTaGTGGTGCAGTGGGTCCCAC | + |
Preference number: 5 (lower is better) Translates to: ERVQRVLRKSHLSRVGLAMDSSF*WCSGSH Trigger: GTGGGACCCACTGCACCACAAGAAGCTGCTGTCCAT...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCAAGGGGCCATCTGGGAACTTCCCTTaGAAGTCATCCAGGCACTCC | + |
Preference number: 5 (lower is better) Translates to: GGGWHEPTPGSRAGTKGPSGNFP*KSSRHS Trigger: GGAGTGCCTGGATGACTTCAAAGGGAAGTTCCCAGA...TGGCCCCTTGGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CCCGGCGCCCCCGCTGCTCAGGCCTGTGATCCGATAGCCCATGTCCAGCAGCATTCCTCACCATCACTTTaGGAGAAAAGGGCAGCTGTG | + |
Preference number: 5 (lower is better) Translates to: PGAPAAQACDPIAHVQQHSSPSL*EKRAAV Trigger: CACAGCTGCCCTTTTCTCCAAAAGTGATGGTGAGGA...ATGCTGCTGGACATGGGCTATCGGATCACAGGCCTGAGCAGCGGGGGCGCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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CDS TCA 90 bp | AACCAGACGCCAGCAGGTCTCCTTTCTCATTCCACTCCAGACAGTTaGCACAGCCTGAGTGTCCCTGAAGCTCCGCCTCCAGGCCCAGCC | + |
Preference number: 5 (lower is better) Translates to: NQTPAGLLSHSTPDS*HSLSVPEAPPPGPA Trigger: GGCTGGGCCTGGAGGCGGAGCTTCAGGGACACTCAGGCTGTGTCAACTGTCTGGAGTGGAATGAGAAAGGAGACCTGCTGGCGTCTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 90 bp | AGCATCGCCTCCAGGGGGTTGGCATTCATGCGCCGCTGGTTGGCCTaGGATGCACCCTCCATATCTTCCACAACTCGGCCTGTGAGGTCT | + |
Preference number: 5 (lower is better) Translates to: SIASRGLAFMRRWLA*DAPSISSTTRPVRS Trigger: AGACCTCACAGGCCGAGTTGTGGAAGATATGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS GCA 90 bp | CGCCTCCAGGGGGTTGGCATTCATGCGCCGCTGGTTGGCCTGAGATaGACCCTCCATATCTTCCACAACTCGGCCTGTGAGGTCTTCACT | + |
Preference number: 5 (lower is better) Translates to: RLQGVGIHAPLVGLR*TLHIFHNSACEVFT Trigger: AGTGAAGACCTCACAGGCCGAGTTGTGGAAGATATGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS CCA 90 bp | TTCAGTTCAAAGAGGCACCGGGCCAGACGGAAGTGTGCCTTCAGGTaGCAAGGGTTTAGGGAGATGGCCTTGAGGCAGTCCCGGAGGGCA | + |
Preference number: 5 (lower is better) Translates to: FSSKRHRARRKCAFR*QGFREMALRQSRRA Trigger: TGCCCTCCGGGACTGCCTCAAGGCCATCTCCCTAAACCCTTGCCACCTGAAGGCACACTTCCGTCTGGCCCGGTGCCTCTTTGAACTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GCTGGGGCTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCATTGTTATCCTGGGGGTaGACGGTGAGGCACTTGGCC | + |
Preference number: 5 (lower is better) Translates to: AGAGDSQGTISPRVRKPALLSWG*TVRHLA Trigger: GGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAA...TGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAGCCCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GCGGAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGTGCTCTCCTCCCATGTaGACTAGCAGCTCTGTGCCA | + |
Preference number: 5 (lower is better) Translates to: AERVQRVLRKSHLSRVGLCSPPM*TSSSVP Trigger: TGGCACAGAGCTGCTAGTCAACATGGGAGGAGAGCA...CAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGTGCTCTCCTCCCATGTaGACTAGCAGCTCTGTGCCA | + |
Preference number: 5 (lower is better) Translates to: ERVQRVLRKSHLSRVGLACSPPM*TSSSVP Trigger: TGGCACAGAGCTGCTAGTCAACATGGGAGGAGAGCA...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CACAGGGCTGGGGGAGGCTGGCATGAACCAACTCCCGGCTCCAGAGCAGGAACCTCCTCACCATCACTTTaGGAGAAAAGGGCAGCTGTG | + |
Preference number: 5 (lower is better) Translates to: HRAGGGWHEPTPGSRAGTSSPSL*EKRAAV Trigger: CACAGCTGCCCTTTTCTCCAAAAGTGATGGTGAGGA...GGTTCCTGCTCTGGAGCCGGGAGTTGGTTCATGCCAGCCTCCCCCAGCCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGATCTGAGATGGAGTCCTaGCGACTTGTGCTTCGAAGG | + |
Preference number: 5 (lower is better) Translates to: GLCVSPHCRVQARQAGGRSEMES*RLVLRR Trigger: CCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAGA...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CCACCCCGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTTGGGGCTGCAAGCAGTaGACAATGGACTCATCCCCC | + |
Preference number: 5 (lower is better) Translates to: PPRHTVGKARPSETARQPWGCKQ*TMDSSP Trigger: GGGGGATGAGTCCATTGTCAACTGCTTGCAGCCCCA...AGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACGGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | GATAGCCCATGTCCAGCAGCATCGCCTCCAGGGGGTTGGCATTCATaGGCCGCTGGTTGGCCTGAGATGCACCCTCCATATCTTCCACAA | + |
Preference number: 5 (lower is better) Translates to: DSPCPAASPPGGWHS*AAGWPEMHPPYLPQ Trigger: TTGTGGAAGATATGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGATGCTGCTGGACATGGGCTATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS CCA 90 bp | TGCTGTGTGTCCTGTGTGCATGGACAGCAGCTTCTTGTGGTGCAGTaGGTCCCACACAATGGTGTGCTGGTCGTCGGAACCAGACGCCAG | + |
Preference number: 5 (lower is better) Translates to: CCVSCVHGQQLLVVQ*VPHNGVLVVGTRRQ Trigger: CTGGCGTCTGGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCATGCACACAGGACACACAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | ATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAGTTCGTGGACGTGCACCTaGGAGTCAGCTGCCCCCGTG | + |
Preference number: 5 (lower is better) Translates to: ISPRVRKPASCSNPHPQSSWTCT*ESAAPV Trigger: CACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGA...ACTTTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACATTTAGGGAGATGGCCTaGAGGCAGTCCCGGAGGGCA | + |
Preference number: 5 (lower is better) Translates to: RHTVGKARPSETARQPRTFREMA*RQSRRA Trigger: TGCCCTCCGGGACTGCCTCAAGGCCATCTCCCTAAA...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | ACCTTCCGGAAAGACCACAGGGGAGCTAGCCCGGGAGTCAGGAGAGTGGCAACATGGAGTCCTTGCGACTaGTGCTTCGAAGGCGAACTG | + |
Preference number: 5 (lower is better) Translates to: TFRKDHRGASPGVRRVATWSPCD*CFEGEL Trigger: CAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCA...TGTTGCCACTCTCCTGACTCCCGGGCTAGCTCCCCTGTGGTCTTTCCGGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | ACCCTCACTCTCCTGGGAGCAGAGCAACAAAAGGCTCGGCTCCTGCCCCAGAGGTCTGAGATGGAGTCCTaGCGACTTGTGCTTCGAAGG | + |
Preference number: 5 (lower is better) Translates to: TLTLLGAEQQKARLLPQRSEMES*RLVLRR Trigger: CCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAGA...CCTCTGGGGCAGGAGCCGAGCCTTTTGTTGCTCTGCTCCCAGGAGAGTGAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAATCGCCTCCAGGGGGTaGGCATTCATGCGCCGCTGG | + |
Preference number: 5 (lower is better) Translates to: TISPRVRKPASCSNPHPQIASRG*AFMRRW Trigger: CCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGAT...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS-3UTR CAA 90 bp | GGCTTATGTGTCTCTCCACACTGCAGGGTCCAGGCTAGGCAGGCGGGCGGGAGACTCCTGCCAAAGAAATaGGCCTCCTTGATATCCGTG | + |
Preference number: 5 (lower is better) Translates to: GLCVSPHCRVQARQAGGRLLPKK*ASLISV Trigger: CACGGATATCAAGGAGGCCAATTTCTTTGGCAGGAG...TCTCCCGCCCGCCTGCCTAGCCTGGACCCTGCAGTGTGGAGAGACACATAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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CDS GCA 90 bp | CATTCGAATGTCATAGAGCCTCACAAAGGGCCCACTGGCCCCTACTaGCAGGCAGTTGTTATCCTGGGGGTTGACGGTGAGGCACTTGGC | + |
Preference number: 5 (lower is better) Translates to: HSNVIEPHKGPTGPY*QAVVILGVDGEALG Trigger: GCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGAGGCTCTATGACATTCGAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | ACCGTCCGGAAGGGGCTTCTGTCGGTCACAGAAGGTATGCACGCCTaGGGAAGGGCTCTGCCTCATGCTCTTTCTGTGGTTGTGGATCAT | + |
Preference number: 5 (lower is better) Translates to: TVRKGLLSVTEGMHA*GRALPHALSVVVDH Trigger: ATGATCCACAACCACAGAAAGAGCATGAGGCAGAGCCCTTCCGCAGGCGTGCATACCTTCTGTGACCGACAGAAGCCCCTTCCGGACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 90 bp | GACAGCAGCTTCTTGTGGTGCAGTGGGTCCCACACAATGGTGTGCTaGTCGTCGGAACCAGACGCCAGCAGGTCTCCTTTCTCATTCCAC | + |
Preference number: 5 (lower is better) Translates to: DSSFLWCSGSHTMVC*SSEPDASRSPFSFH Trigger: GTGGAATGAGAAAGGAGACCTGCTGGCGTCTGGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 90 bp | TGTGCATGGACAGCAGCTTCTTGTGGTGCAGTGGGTCCCACACAATaGTGTGCTGGTCGTCGGAACCAGACGCCAGCAGGTCTCCTTTCT | + |
Preference number: 5 (lower is better) Translates to: CAWTAASCGAVGPTQ*CAGRRNQTPAGLLS Trigger: AGAAAGGAGACCTGCTGGCGTCTGGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCATGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACATTGTTATCCTGGGGGTaGACGGTGAGGCACTTGGCC | + |
Preference number: 5 (lower is better) Translates to: RHTVGKARPSETARQPRTLLSWG*TVRHLA Trigger: GGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAA...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 90 bp | GGTTGGCCTGAGATGCACCCTCCATATCTTCCACAACTCGGCCTGTaGGGTCTTCACTCTCTGGTCGTGGGTTCCACAGTCGCACAACAG | + |
Preference number: 5 (lower is better) Translates to: GWPEMHPPYLPQLGL*GLHSLVVGSTVAQQ Trigger: CTGTTGTGCGACTGTGGAACCCACGACCAGAGAGTGAAGACCTCACAGGCCGAGTTGTGGAAGATATGGAGGGTGCATCTCAGGCCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | ATGGACAGCAGCTTCTTGTGGTGCAGTGGGTCCCACACAATGGTGTaGTGGTCGTCGGAACCAGACGCCAGCAGGTCTCCTTTCTCATTC | + |
Preference number: 5 (lower is better) Translates to: MDSSFLWCSGSHTMV*WSSEPDASRSPFSF Trigger: GAATGAGAAAGGAGACCTGCTGGCGTCTGGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | CGTCTCCTTTACCGTAAGGTCGTGGACGTGCACCTTGGAGTCAGCTaGCCCCGTGATCAAAATGCGGTCTCCAGCATGAGGCAGGAACTT | + |
Preference number: 5 (lower is better) Translates to: RLLYRKVVDVHLGVS*PRDQNAVSSMRQEL Trigger: AAGTTCCTGCCTCATGCTGGAGACCGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACCTTACGGTAAAGGAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | AGCTCCGTTCCCGTAGCACCATTTCGTCTTCTGAGATGGAGTCCTTaGGACTTGTGCTTCGAAGGCGAACTGGACCACCACCACCACCAG | + |
Preference number: 5 (lower is better) Translates to: SSVPVAPFRLLRWSP*DLCFEGELDHHHHQ Trigger: CTGGTGGTGGTGGTGGTCCAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAGAAGACGAAATGGTGCTACGGGAACGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 90 bp | GCCGTGGCAATGCGCTTCACCCGGTTTGTGTGGTCTCCAAACATGTaGATCGTCTCCTTTACCGTAAGGTCGTGGACGTGCACCTTGGAG | + |
Preference number: 5 (lower is better) Translates to: AVAMRFTRFVWSPNM*IVSFTVRSWTCTLE Trigger: CTCCAAGGTGCACGTCCACGACCTTACGGTAAAGGAGACGATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATTGCCACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 90 bp | TTAGGCCACATGGGCGCCGTGGCAATGCGCTTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATCGTCTCCTTTACCGTAAGGTCGTGG | + |
Preference number: 5 (lower is better) Translates to: LGHMGAVAMRFTRFV*SPNMWIVSFTVRSW Trigger: CCACGACCTTACGGTAAAGGAGACGATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATTGCCACGGCGCCCATGTGGCCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACATGGACAGCAGCTTCTaGTGGTGCAGTGGGTCCCAC | + |
Preference number: 5 (lower is better) Translates to: QGTISPRVRKPASCSNPHMDSSF*WCSGSH Trigger: GTGGGACCCACTGCACCACAAGAAGCTGCTGTCCAT...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCTACTGCCAGGCAGTaGTTATCCTGGGGGTTGACG | + |
Preference number: 5 (lower is better) Translates to: QGTISPRVRKPASCSNPHPTARQ*LSWGLT Trigger: CGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGG...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGTGCAAAGGGTCCTTAGGAAGAGCCACCTCAGCAGGGTAGGCCTGGCGAAGAAATTGGCCTCCTaGATATCCGTGGTGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: ERVQRVLRKSHLSRVGLAKKLAS*ISVVVL Trigger: CAACACCACCACGGATATCAAGGAGGCCAATTTCTT...CGCCAGGCCTACCCTGCTGAGGTGGCTCTTCCTAAGGACCCTTTGCACCCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACTGGGGCTGCAAGCAGTaGACAATGGACTCATCCCCC | + |
Preference number: 5 (lower is better) Translates to: QGTISPRVRKPASCSNPHWGCKQ*TMDSSP Trigger: GGGGGATGAGTCCATTGTCAACTGCTTGCAGCCCCA...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACAGCACTCGGACGAGGTaGGTGGTCTCCTGCCAAAGA | + |
Preference number: 5 (lower is better) Translates to: QGTISPRVRKPASCSNPHSTRTR*VVSCQR Trigger: TCTTTGGCAGGAGACCACCAACCTCGTCCGAGTGCT...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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CDS TCA 90 bp | CTGCCTTCTTCTCCTCACCATCACTTTTGGAGAAAAGGGCAGCTGTaGTGTCCCGGCCTAATGCGTCACATGCACTGCTGTGGGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: LPSSPHHHFWRKGQL*CPGLMRHMHCCGPA Trigger: AGCAGGCCCACAGCAGTGCATGTGACGCATTAGGCCGGGACATCACAGCTGCCCTTTTCTCCAAAAGTGATGGTGAGGAGAAGAAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 90 bp | GTGTGGTCTCCAAACATGTGGATCGTCTCCTTTACCGTAAGGTCGTaGACGTGCACCTTGGAGTCAGCTGCCCCCGTGATCAAAATGCGG | + |
Preference number: 5 (lower is better) Translates to: VWSPNMWIVSFTVRS*TCTLESAAPVIKMR Trigger: CCGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACCTTACGGTAAAGGAGACGATCCACATGTTTGGAGACCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAACCTACTGCCAGGCAGTaGTTATCCTGGGGGTTGACG | + |
Preference number: 5 (lower is better) Translates to: TISPRVRKPASCSNPHPQPTARQ*LSWGLT Trigger: CGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGG...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CGTCACACTGTAGGAAAGGCAAGGCCCTCAGAGACAGCGAGACAGCCTAGGACATCTGGGAACTTCCCTTaGAAGTCATCCAGGCACTCC | + |
Preference number: 5 (lower is better) Translates to: RHTVGKARPSETARQPRTSGNFP*KSSRHS Trigger: GGAGTGCCTGGATGACTTCAAAGGGAAGTTCCCAGA...TGTCCTAGGCTGTCTCGCTGTCTCTGAGGGCCTTGCCTTTCCTACAGTGTGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCATGGAGTCCTTGCGACTaGTGCTTCGAAGGCGAACTG | + |
Preference number: 5 (lower is better) Translates to: LGTVKGQSARESESQQVAWSPCD*CFEGEL Trigger: CAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCA...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 90 bp | ACTCGGACGAGGTTGGTGGTCTCCTGCCAAAGAAATTGGCCTCCTTaGTATCCGTGGTGGTGTTGCAGTGCCCACAGTAGCGGAACTGAT | + |
Preference number: 5 (lower is better) Translates to: TRTRLVVSCQRNWPP*YPWWCCSAHSSGTD Trigger: ATCAGTTCCGCTACTGTGGGCACTGCAACACCACCACGGATATCAAGGAGGCCAATTTCTTTGGCAGGAGACCACCAACCTCGTCCGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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CDS GCA 90 bp | ATATTTGCTGTGTGTCCTGTGTGCATGGACAGCAGCTTCTTGTGGTaGAGTGGGTCCCACACAATGGTGTGCTGGTCGTCGGAACCAGAC | + |
Preference number: 5 (lower is better) Translates to: IFAVCPVCMDSSFLW*SGSHTMVCWSSEPD Trigger: GTCTGGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCATGCACACAGGACACACAGCAAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 90 bp | TCTCCAAACATGTGGATCGTCTCCTTTACCGTAAGGTCGTGGACGTaGACCTTGGAGTCAGCTGCCCCCGTGATCAAAATGCGGTCTCCA | + |
Preference number: 5 (lower is better) Translates to: SPNMWIVSFTVRSWT*TLESAAPVIKMRSP Trigger: TGGAGACCGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACCTTACGGTAAAGGAGACGATCCACATGTTTGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 90 bp | GATAGTCGTAGCTCCGTTCCCGTAGCACCATTTCGTCTTCTGAGATaGAGTCCTTGCGACTTGTGCTTCGAAGGCGAACTGGACCACCAC | + |
Preference number: 5 (lower is better) Translates to: DSRSSVPVAPFRLLR*SPCDLCFEGELDHH Trigger: GTGGTGGTCCAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAGAAGACGAAATGGTGCTACGGGAACGGAGCTACGACTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CTGGGGACAGTCAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCATGCGCTTCACCCGGTTaGTGTGGTCTCCAAACATGT | + |
Preference number: 5 (lower is better) Translates to: LGTVKGQSARESESQQVACASPG*CGLQTC Trigger: ACATGTTTGGAGACCACACAAACCGGGTGAAGCGCA...TGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTGACTGTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | CAAGGGACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACTTGCTGCCAAAGAAATaGGCCTCCTTGATATCCGTG | + |
Preference number: 5 (lower is better) Translates to: QGTISPRVRKPASCSNPHLLPKK*ASLISV Trigger: CACGGATATCAAGGAGGCCAATTTCTTTGGCAGCAA...GTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGTCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS CCA 90 bp | TTCGACACGCCGTTGGACACCCCGTTAGTAGACATCTTGCCGTTCTaGACTTCCACGGAGTGGCATTTTCTAGGCAAGAGGAAGGTATAT | + |
Preference number: 5 (lower is better) Translates to: FDTPLDTPLVDILPF*TSTEWHFLGKRKVY Trigger: ATATACCTTCCTCTTGCCTAGAAAATGCCACTCCGTGGAAGTCCAGAACGGCAAGATGTCTACTAACGGGGTGTCCAACGGCGTGTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS-3UTR CAA 90 bp | ACAATCAGCCCGAGAGTCAGAAAGCCAGCAAGTTGCAGCAATCCCCACCCACAAAAGAAATTGGCCTCCTaGATATCCGTGGTGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: TISPRVRKPASCSNPHPQKKLAS*ISVVVL Trigger: CAACACCACCACGGATATCAAGGAGGCCAATTTCTT...TTGTGGGTGGGGATTGCTGCAACTTGCTGGCTTTCTGACTCTCGGGCTGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | TGGGTCCACTGCTGGCAGGCGAAGGCTTCATTGGCCTaGTGCTTCACACGCTCCAGGTATGGGGGCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: WVHCWQAKASLA*CFTRSRYGGSS Trigger: GGAGCTGCCCCCATACCTGGAGCGTGTGAAGCAGCAGGCCAATGAAGCCTTCGCCTGCCAGCAGTGGACCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | GGCCCACTGGCCCCTACTGCCAGGCAGTTGTTATCCTaGGGGTTGACGGTGAGGCACTTGGCCTCCACCATC | + |
Preference number: 6 (lower is better) Translates to: GPLAPTARQLLS*GLTVRHLASTI Trigger: GATGGTGGAGGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | CTGGCCCCTACTGCCAGGCAGTTGTTATCCTGGGGGTaGACGGTGAGGCACTTGGCCTCCACCATCGGGCCA | + |
Preference number: 6 (lower is better) Translates to: LAPTARQLLSWG*TVRHLASTIGP Trigger: TGGCCCGATGGTGGAGGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 72 bp | CACCCCTTGCTCTCTGGCAGCCGGAAGCCGTTGCTGTaGAGGTGTAGGCCATTCGACACGCCGTTGGACACC | + |
Preference number: 6 (lower is better) Translates to: HPLLSGSRKPLL*RCRPFDTPLDT Trigger: GGTGTCCAACGGCGTGTCGAATGGCCTACACCTTCACAGCAACGGCTTCCGGCTGCCAGAGAGCAAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | CTCCCGAAGGTCATACTGGCGGATAAGCCCATCCTCTaGGGCGCTCCAGAACGTGTTAGGCCACATGGGCGC | + |
Preference number: 6 (lower is better) Translates to: LPKVILADKPIL*GAPERVRPHGR Trigger: GCGCCCATGTGGCCTAACACGTTCTGGAGCGCCGCAGAGGATGGGCTTATCCGCCAGTATGACCTTCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | GTGGGTTCCACAGTCGCACAACAGGGTCGATGCCACTaGTGGCCAGGAAGCAGTAGCTGGGATGGGGCTGCA | + |
Preference number: 6 (lower is better) Translates to: VGSTVAQQGRCH*WPGSSSWDGAA Trigger: TGCAGCCCCATCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGACCCTGTTGTGCGACTGTGGAACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | GATAGCCCATGTCCAGCAGCATCGCCTCCAGGGGGTTaGCATTCATGCGCCGCTGGTTGGCCTGAGATGCAC | + |
Preference number: 6 (lower is better) Translates to: DSPCPAASPPGG*HSCAAGWPEMH Trigger: GTGCATCTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGATGCTGCTGGACATGGGCTATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS CAA 72 bp | CTCACAAAGGGCCCACTGGCCCCTACTGCCAGGCAGTaGTTATCCTGGGGGTTGACGGTGAGGCACTTGGCC | + |
Preference number: 6 (lower is better) Translates to: LTKGPLAPTARQ*LSWGLTVRHLA Trigger: GGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 90 bp | AAGGGCCCACTGGCCCCTACTGCCAGGCAGTTGTTATCCTGGGGGTaGACGGTGAGGCACTTGGCCTCCACCATCGGGCCACAGTATTCT | + |
Preference number: 6 (lower is better) Translates to: KGPLAPTARQLLSWG*TVRHLASTIGPQYS Trigger: AGAATACTGTGGCCCGATGGTGGAGGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 72 bp | TCCAGGCCCAGCCGTCGGATAAAGGGGTCTGTGACATaGTATCGCCGTTCAAAGCTCAGGGCACCCCGCTCC | + |
Preference number: 6 (lower is better) Translates to: SRPSRRIKGSVT*YRRSKLRAPRS Trigger: GGAGCGGGGTGCCCTGAGCTTTGAACGGCGATATCATGTCACAGACCCCTTTATCCGACGGCTGGGCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 72 bp | GTGCCTTCAGGTGGCAAGGGTTTAGGGAGATGGCCTTaGGGCAGTCCCGGAGGGCATCATAGTGGTCCCCGT | + |
Preference number: 6 (lower is better) Translates to: VPSGGKGLGRWP*GSPGGHHSGPR Trigger: ACGGGGACCACTATGATGCCCTCCGGGACTGCCTCAAGGCCATCTCCCTAAACCCTTGCCACCTGAAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | CCGTCCGGAAGGGGCTTCTGTCGGTCACAGAAGGTATaGACGCCTGCGGAAGGGCTCTGCCTCATGCTCTTT | + |
Preference number: 6 (lower is better) Translates to: PSGRGFCRSQKV*TPAEGLCLMLF Trigger: AAAGAGCATGAGGCAGAGCCCTTCCGCAGGCGTGCATACCTTCTGTGACCGACAGAAGCCCCTTCCGGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | TGTCCAGCAGCATCGCCTCCAGGGGGTTGGCATTCATaGGCCGCTGGTTGGCCTGAGATGCACCCTCCATAT | + |
Preference number: 6 (lower is better) Translates to: CPAASPPGGWHS*AAGWPEMHPPY Trigger: ATATGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGATGCTGCTGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS TCA 72 bp | GGTCGTGGACGTGCACCTTGGAGTCAGCTGCCCCCGTaGTCAAAATGCGGTCTCCAGCATGAGGCAGGAACT | + |
Preference number: 6 (lower is better) Translates to: GRGRAPWSQLPP*SKCGLQHEAGT Trigger: AGTTCCTGCCTCATGCTGGAGACCGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 72 bp | TCCAGGGGGTTGGCATTCATGCGCCGCTGGTTGGCCTaGGATGCACCCTCCATATCTTCCACAACTCGGCCT | + |
Preference number: 6 (lower is better) Translates to: SRGLAFMRRWLA*DAPSISSTTRP Trigger: AGGCCGAGTTGTGGAAGATATGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS GCA 72 bp | AGCTTCTTGTGGTGCAGTGGGTCCCACACAATGGTGTaGTGGTCGTCGGAACCAGACGCCAGCAGGTCTCCT | + |
Preference number: 6 (lower is better) Translates to: SFLWCSGSHTMV*WSSEPDASRSP Trigger: AGGAGACCTGCTGGCGTCTGGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | GTCATAGAGCCTCACAAAGGGCCCACTGGCCCCTACTaGCAGGCAGTTGTTATCCTGGGGGTTGACGGTGAG | + |
Preference number: 6 (lower is better) Translates to: VIEPHKGPTGPY*QAVVILGVDGE Trigger: CTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGAGGCTCTATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | CTTCACCGGCAGGTGACCTGCGACATAATACTGCGCTaGACCGTCCGGAAGGGGCTTCTGTCGGTCACAGAA | + |
Preference number: 6 (lower is better) Translates to: LHRQVTCDIILR*TVRKGLLSVTE Trigger: TTCTGTGACCGACAGAAGCCCCTTCCGGACGGTGCAGCGCAGTATTATGTCGCAGGTCACCTGCCGGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | TGGGGCTGCAAGCAGTTGACAATGGACTCATCCCCCTaGAGCACTCGGACGAGGTTGGTGGTCTCCTGCCAA | + |
Preference number: 6 (lower is better) Translates to: WGCKQLTMDSSP*STRTRLVVSCQ Trigger: TTGGCAGGAGACCACCAACCTCGTCCGAGTGCTGCAGGGGGATGAGTCCATTGTCAACTGCTTGCAGCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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CDS CCA 72 bp | ACAGCAGCTTCTTGTGGTGCAGTGGGTCCCACACAATaGTGTGCTGGTCGTCGGAACCAGACGCCAGCAGGT | + |
Preference number: 6 (lower is better) Translates to: TAASCGAVGPTQ*CAGRRNQTPAG Trigger: ACCTGCTGGCGTCTGGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | TCGCCTCCAGGGGGTTGGCATTCATGCGCCGCTGGTTaGCCTGAGATGCACCCTCCATATCTTCCACAACTC | + |
Preference number: 6 (lower is better) Translates to: SPPGGWHSCAAG*PEMHPPYLPQL Trigger: GAGTTGTGGAAGATATGGAGGGTGCATCTCAGGCCAACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS GCA 72 bp | GTGTGTCCTGTGTGCATGGACAGCAGCTTCTTGTGGTaGAGTGGGTCCCACACAATGGTGTGCTGGTCGTCG | + |
Preference number: 6 (lower is better) Translates to: VCPVCMDSSFLW*SGSHTMVCWSS Trigger: CGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCATGCACACAGGACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | TACCGTAAGGTCGTGGACGTGCACCTTGGAGTCAGCTaGCCCCGTGATCAAAATGCGGTCTCCAGCATGAGG | + |
Preference number: 6 (lower is better) Translates to: YRKVVDVHLGVS*PRDQNAVSSMR Trigger: CCTCATGCTGGAGACCGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACCTTACGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | TCCTGTGTGCATGGACAGCAGCTTCTTGTGGTGCAGTaGGTCCCACACAATGGTGTGCTGGTCGTCGGAACC | + |
Preference number: 6 (lower is better) Translates to: SCVHGQQLLVVQ*VPHNGVLVVGT Trigger: GGTTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCATGCACACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 90 bp | CCTACTGCCAGGCAGTTGTTATCCTGGGGGTTGACGGTGAGGCACTaGGCCTCCACCATCGGGCCACAGTATTCTGTTAGGTCAATCAGC | + |
Preference number: 6 (lower is better) Translates to: PTARQLLSWGLTVRH*ASTIGPQYSVRSIS Trigger: GCTGATTGACCTAACAGAATACTGTGGCCCGATGGTGGAGGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | AAGGGGCTTCTGTCGGTCACAGAAGGTATGCACGCCTaGGGAAGGGCTCTGCCTCATGCTCTTTCTGTGGTT | + |
Preference number: 6 (lower is better) Translates to: KGLLSVTEGMHA*GRALPHALSVV Trigger: AACCACAGAAAGAGCATGAGGCAGAGCCCTTCCGCAGGCGTGCATACCTTCTGTGACCGACAGAAGCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | CCAAACATGTGGATCGTCTCCTTTACCGTAAGGTCGTaGACGTGCACCTTGGAGTCAGCTGCCCCCGTGATC | + |
Preference number: 6 (lower is better) Translates to: PNMWIVSFTVRS*TCTLESAAPVI Trigger: GATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACCTTACGGTAAAGGAGACGATCCACATGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | GCCACATGGGCGCCGTGGCAATGCGCTTCACCCGGTTaGTGTGGTCTCCAAACATGTGGATCGTCTCCTTTA | + |
Preference number: 6 (lower is better) Translates to: ATWAPWQCASPG*CGLQTCGSSPL Trigger: TAAAGGAGACGATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATTGCCACGGCGCCCATGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | AGGCAGTTGTTATCCTGGGGGTTGACGGTGAGGCACTaGGCCTCCACCATCGGGCCACAGTATTCTGTTAGG | + |
Preference number: 6 (lower is better) Translates to: RQLLSWGLTVRH*ASTIGPQYSVR Trigger: CCTAACAGAATACTGTGGCCCGATGGTGGAGGCCAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | ACAATGGACTCATCCCCCTGCAGCACTCGGACGAGGTaGGTGGTCTCCTTTTCCCAGATGAAGAAGGAGCCG | + |
Preference number: 6 (lower is better) Translates to: TMDSSPCSTRTR*VVSFSQMKKEP Trigger: CGGCTCCTTCTTCATCTGGGAAAAGGAGACCACCAACCTCGTCCGAGTGCTGCAGGGGGATGAGTCCATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS TCA 72 bp | GAGATGCACCCTCCATATCTTCCACAACTCGGCCTGTaGGGTCTTCACTCTCTGGTCGTGGGTTCCACAGTC | + |
Preference number: 6 (lower is better) Translates to: EMHPPYLPQLGL*GLHSLVVGSTV Trigger: GACTGTGGAACCCACGACCAGAGAGTGAAGACCTCACAGGCCGAGTTGTGGAAGATATGGAGGGTGCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS GCA 72 bp | CCCGTAGCACCATTTCGTCTTCTGAGATGGAGTCCTTaGGACTTGTGCTTCGAAGGCGAACTGGACCACCAC | + |
Preference number: 6 (lower is better) Translates to: PVAPFRLLRWSP*DLCFEGELDHH Trigger: GTGGTGGTCCAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAGAAGACGAAATGGTGCTACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | ATGGGCGCCGTGGCAATGCGCTTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATCGTCTCCTTTACCGTA | + |
Preference number: 6 (lower is better) Translates to: MGAVAMRFTRFV*SPNMWIVSFTV Trigger: TACGGTAAAGGAGACGATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATTGCCACGGCGCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | TCATTCGAATGTCATAGAGCCTCACAAAGGGCCCACTaGCCCCTACTGCCAGGCAGTTGTTATCCTGGGGGT | + |
Preference number: 6 (lower is better) Translates to: SFECHRASQRAH*PLLPGSCYPGG Trigger: ACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGAGGCTCTATGACATTCGAATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | ATCGTCTCCTTTACCGTAAGGTCGTGGACGTGCACCTaGGAGTCAGCTGCCCCCGTGATCAAAATGCGGTCT | + |
Preference number: 6 (lower is better) Translates to: IVSFTVRSWTCT*ESAAPVIKMRS Trigger: AGACCGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACCTTACGGTAAAGGAGACGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | GCACCATTTCGTCTTCTGAGATGGAGTCCTTGCGACTaGTGCTTCGAAGGCGAACTGGACCACCACCACCAC | + |
Preference number: 6 (lower is better) Translates to: APFRLLRWSPCD*CFEGELDHHHH Trigger: GTGGTGGTGGTGGTCCAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAGAAGACGAAATGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | CACTCGGACGAGGTTGGTGGTCTCCTGCCAAAGAAATaGGCCTCCTTGATATCCGTGGTGGTGTTGCAGTGC | + |
Preference number: 6 (lower is better) Translates to: HSDEVGGLLPKK*ASLISVVVLQC Trigger: GCACTGCAACACCACCACGGATATCAAGGAGGCCAATTTCTTTGGCAGGAGACCACCAACCTCGTCCGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105906.2 |
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CDS CAA 90 bp | TGTAGGCCATTCGACACGCCGTTGGACACCCCGTTAGTAGACATCTaGCCGTTCTGGACTTCCACGGAGTGGCATTTTCTAGGCAAGAGG | + |
Preference number: 6 (lower is better) Translates to: CRPFDTPLDTPLVDI*PFWTSTEWHFLGKR Trigger: CCTCTTGCCTAGAAAATGCCACTCCGTGGAAGTCCAGAACGGCAAGATGTCTACTAACGGGGTGTCCAACGGCGTGTCGAATGGCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 90 bp | AAGCAGTTGACAATGGACTCATCCCCCTGCAGCACTCGGACGAGGTaGGTGGTCTCCTTTTCCCAGATGAAGAAGGAGCCGTCATCAGAG | + |
Preference number: 6 (lower is better) Translates to: KQLTMDSSPCSTRTR*VVSFSQMKKEPSSE Trigger: CTCTGATGACGGCTCCTTCTTCATCTGGGAAAAGGAGACCACCAACCTCGTCCGAGTGCTGCAGGGGGATGAGTCCATTGTCAACTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043305.14 |
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CDS GCA 72 bp | ATGTGGATCGTCTCCTTTACCGTAAGGTCGTGGACGTaGACCTTGGAGTCAGCTGCCCCCGTGATCAAAATG | + |
Preference number: 6 (lower is better) Translates to: MWIVSFTVRSWT*TLESAAPVIKM Trigger: CATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCACGTCCACGACCTTACGGTAAAGGAGACGATCCACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | ATGCGCTTCACCCGGTTTGTGTGGTCTCCAAACATGTaGATCGTCTCCTTTACCGTAAGGTCGTGGACGTGC | + |
Preference number: 6 (lower is better) Translates to: MRFTRFVWSPNM*IVSFTVRSWTC Trigger: GCACGTCCACGACCTTACGGTAAAGGAGACGATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CCA 72 bp | CCGTTGGACACCCCGTTAGTAGACATCTTGCCGTTCTaGACTTCCACGGAGTGGCATTTTCTAGGCAAGAGG | + |
Preference number: 6 (lower is better) Translates to: PLDTPLVDILPF*TSTEWHFLGKR Trigger: CCTCTTGCCTAGAAAATGCCACTCCGTGGAAGTCCAGAACGGCAAGATGTCTACTAACGGGGTGTCCAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | TCCCGTAGCACCATTTCGTCTTCTGAGATGGAGTCCTaGCGACTTGTGCTTCGAAGGCGAACTGGACCACCA | + |
Preference number: 6 (lower is better) Translates to: SRSTISSSEMES*RLVLRRRTGPP Trigger: TGGTGGTCCAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAGAAGACGAAATGGTGCTACGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 90 bp | GAGAAGATATTTGCTGTGTGTCCTGTGTGCATGGACAGCAGCTTCTaGTGGTGCAGTGGGTCCCACACAATGGTGTGCTGGTCGTCGGAA | + |
Preference number: 6 (lower is better) Translates to: EKIFAVCPVCMDSSF*WCSGSHTMVCWSSE Trigger: TTCCGACGACCAGCACACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCATGCACACAGGACACACAGCAAATATCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS TCA 72 bp | TCTCCTCACCATCACTTTTGGAGAAAAGGGCAGCTGTaGTGTCCCGGCCTAATGCGTCACATGCACTGCTGT | + |
Preference number: 6 (lower is better) Translates to: SPHHHFWRKGQL*CPGLMRHMHCC Trigger: ACAGCAGTGCATGTGACGCATTAGGCCGGGACATCACAGCTGCCCTTTTCTCCAAAAGTGATGGTGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | GTCAAGTCAAACAGATACACCTGCTCTCCTCCCATGTaGACTAGCAGCTCTGTGCCATTGGGGCTGAAGGTC | + |
Preference number: 6 (lower is better) Translates to: VKSNRYTCSPPM*TSSSVPLGLKV Trigger: GACCTTCAGCCCCAATGGCACAGAGCTGCTAGTCAACATGGGAGGAGAGCAGGTGTATCTGTTTGACTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | TTCGACACGCCGTTGGACACCCCGTTAGTAGACATCTaGCCGTTCTGGACTTCCACGGAGTGGCATTTTCTA | + |
Preference number: 6 (lower is better) Translates to: FDTPLDTPLVDI*PFWTSTEWHFL Trigger: TAGAAAATGCCACTCCGTGGAAGTCCAGAACGGCAAGATGTCTACTAACGGGGTGTCCAACGGCGTGTCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 90 bp | ATCGGGCCACAGTATTCTGTTAGGTCAATCAGCACCTCTGAGTGTTaGCTGTTCTCCCGAAGGTCATACTGGCGGATAAGCCCATCCTCT | + |
Preference number: 6 (lower is better) Translates to: IGPQYSVRSISTSEC*LFSRRSYWRISPSS Trigger: AGAGGATGGGCTTATCCGCCAGTATGACCTTCGGGAGAACAGCAAACACTCAGAGGTGCTGATTGACCTAACAGAATACTGTGGCCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |
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CDS CAA 72 bp | CAGTATTCTGTTAGGTCAATCAGCACCTCTGAGTGTTaGCTGTTCTCCCGAAGGTCATACTGGCGGATAAGC | + |
Preference number: 6 (lower is better) Translates to: QYSVRSISTSEC*LFSRRSYWRIS Trigger: GCTTATCCGCCAGTATGACCTTCGGGAGAACAGCAAACACTCAGAGGTGCTGATTGACCTAACAGAATACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043305.14 ENSMUST00000105906.2 |