Pregenerated sensors for WDSUB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026988Ensembl transcript IDs: ENSMUST00000028368.14, ENSMUST00000102751.9, ENSMUST00000128671.2, ENSMUST00000133809.3, ENSMUST00000139689.8, ENSMUST00000140475.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCCTGGAACTCCTGATCCTGGAGATCCACCTGTCTCTGCCTCCTaGGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATA | + |
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Preference number: 1 (lower is better) Translates to: CPGTPDPGDPPVSAS*VLGLKVGTTTALLI Trigger: TATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCAGAGACAGGTGGATCTCCAGGATCAGGAGTTCCAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| 3UTR GCA 90 bp | TGTCTCTGCCTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTaGCCTGCTCATAATTTACAGTTTTTAAAAGTAACTGAATTGAAC | + |
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Preference number: 1 (lower is better) Translates to: CLCLLSAGIKGGHHH*PAHNLQFLKVTELN Trigger: GTTCAATTCAGTTACTTTTAAAAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCAGAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTGGGCTGCTTAGCATTTTaGATCATTTGCAGGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: TCPINWAVLELLILEIHLGCLAF*IICRAS Trigger: TGATGCCCTGCAAATGATTCAAAATGCTAAGCAGCC...CAGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATTTACAGTTTTTTATTTTGCTTTCGTaGTGGCTGCTTAGCATTTTG | + |
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Preference number: 2 (lower is better) Translates to: SAGIKGGHHHCPAHNLQFFILLS*WLLSIL Trigger: CAAAATGCTAAGCAGCCATCACGAAAGCAAAATAAA...AAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| 3UTR CCA 72 bp | TGTAGCCTTGGCCGTCCTGAGACTTGCCCTATAAACTaGGCTGTCCTGGAACTCCTGATCCTGGAGATCCAC | + |
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Preference number: 3 (lower is better) Translates to: CSLGRPETCPIN*AVLELLILEIH Trigger: GTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTCTCAGGACGGCCAAGGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| 3UTR GCA 72 bp | AGGGTTTCTCTGTGTAGCCTTGGCCGTCCTGAGACTTaGCCTATAAACTGGGCTGTCCTGGAACTCCTGATC | + |
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Preference number: 3 (lower is better) Translates to: RVSLCSLGRPET*PINWAVLELLI Trigger: GATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTCTCAGGACGGCCAAGGCTACACAGAGAAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| 3UTR GCA 72 bp | CTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTaGCCTGCTCATAATTTACAGTTTTTAAAAGTAACT | + |
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Preference number: 3 (lower is better) Translates to: LLSAGIKGGHHH*PAHNLQFLKVT Trigger: AGTTACTTTTAAAAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR GCA 90 bp | TGCCTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATAGGGTGTGTCCGCTGTaGGAGCTCCACAGCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: CLLSAGIKGGHHHCPAHNRVCPL*ELHSTV Trigger: CACGGTGCTGTGGAGCTCGCACAGCGGACACACCCT...ATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | ACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTGAAAAGCTGCAGCAGGTaGTCCCGAGATCGTGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: TCPINWAVLELLILEIHLKSCSR*SRDRAP Trigger: AGGCGCACGATCTCGGGATCACCTGCTGCAGCTTTT...CAGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | TGCCTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATTCTCCAGCCATCGGTTaGTGGCCATCTTCAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CLLSAGIKGGHHHCPAHNSPAIG*WPSSVS Trigger: GGACACTGAAGATGGCCATCAACCGATGGCTGGAGA...ATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | TGCCTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATACATACCTGGTATGCTaGGTCAGCGTGTGTAGCACA | + |
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Preference number: 4 (lower is better) Translates to: CLLSAGIKGGHHHCPAHNTYLVC*VSVCST Trigger: TGTGCTACACACGCTGACTCAGCATACCAGGTATGT...ATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | GAGACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACTGGGGTCAGTACCAGTaGAGGGAGAGCCAAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: ETCPINWAVLELLILEIHWGQYQ*RESQIC Trigger: ACAAATTTGGCTCTCCCTTCACTGGTACTGACCCCA...GTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR GCA 90 bp | GACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTTACTCCTCAGGACTTTaGTGCGCAGCCCTAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: DLPYKLGCPGTPDPGDPPYSSGL*CAALEI Trigger: AATCTCTAGGGCTGCGCAGCAAAGTCCTGAGGAGTA...AGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATTTACAGTTTGGGAGTACAGGCGGATaGTCTTGTCCAAGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SAGIKGGHHHCPAHNLQFGSTGG*SCPRSR Trigger: CCTGCTCCTTGGACAAGACCATCCGCCTGTACTCCC...AAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CCA 90 bp | TGCCTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATCAAGTAAGAGAGTGTTaGGTGCAAACGCACAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: CLLSAGIKGGHHHCPAHNQVREC*VQTHKS Trigger: CGACTTGTGCGTTTGCACCCAACACTCTCTTACTTG...ATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | ACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTGTTGATTTCACAGTCTTaGCCACATGACGCCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: TCPINWAVLELLILEIHLLISQS*PHDANW Trigger: CCAGTTGGCGTCATGTGGTCAAGACTGTGAAATCAA...CAGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR GCA 90 bp | GACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTCCCATCGATGTTGTTTaGCCTGAAAATACCGACGAG | + |
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Preference number: 4 (lower is better) Translates to: DLPYKLGCPGTPDPGDPPPIDVV*PENTDE Trigger: CTCGTCGGTATTTTCAGGGCAAACAACATCGATGGG...AGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CCA 90 bp | GACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTTCGTTCATGCTTCCTTaGCAAGGTGTTTCCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DLPYKLGCPGTPDPGDPPSFMLP*QGVSRS Trigger: TGACCTGGAAACACCTTGCCAAGGAAGCATGAACGA...AGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | GAGACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCATCTTTCCATCATGTaGAAAAGCACAGGCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ETCPINWAVLELLILEIHHLSIM*KSTGQN Trigger: GTTCTGGCCTGTGCTTTTTCACATGATGGAAAGATG...GTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | GAGACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCCAGACTTTCCTTTGTaGGATGCAATAGTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ETCPINWAVLELLILEIHPDFPL*DAIVLS Trigger: GGAAAGAACTATTGCATCTCACAAAGGAAAGTCTGG...GTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR TCA 90 bp | AGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATTTACAGTTTCTGACCATTCTTCAGTaGAATGTTTCAGCGGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: SAGIKGGHHHCPAHNLQFLTILQ*NVSAGR Trigger: ACGACCCGCTGAAACATTTCACTGAAGAATGGTCAG...AAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR GCA 90 bp | GACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTCTTTCCTTTGTGAGATaGAATAGTTCTTTCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: DLPYKLGCPGTPDPGDPPLSFVR*NSSFPS Trigger: CGATGGGAAAGAACTATTGCATCTCACAAAGGAAAG...AGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATTTACAGTTTGAGTTCTCTGGTTATTaGGCAGATGAACTCGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SAGIKGGHHHCPAHNLQFEFSGY*ADELVR Trigger: CCTGACGAGTTCATCTGCCCAATAACCAGAGAACTC...AAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATTTACAGTTTGTACGCTTCTTCTTGTaGATCCAGCTTTCCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: SAGIKGGHHHCPAHNLQFVRFFL*IQLSIA Trigger: AGCAATGGAAAGCTGGATCCACAAGAAGAAGCGTAC...AAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR GCA 90 bp | AGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATTTACAGTTTGTTTCCAGGTCAAACTaGCAAATGTTCACTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SAGIKGGHHHCPAHNLQFVSRSN*QMFTVL Trigger: CAAGACAGTGAACATTTGGCAGTTTGACCTGGAAAC...AAACTGTAAATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS GCA 90 bp | GAGTCTGGGGAAAAGCAACAGACGCGCACAGGGCTGCCACCCGGCTaGTCCAACACGGTCAGGGTGTGTCCGCTGTGCGAGCTCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: ESGEKQQTRTGLPPG*SNTVRVCPLCELHS Trigger: GCTGTGGAGCTCGCACAGCGGACACACCCTGACCGTGTTGGAGCAGCCGGGTGGCAGCCCTGTGCGCGTCTGTTGCTTTTCCCCAGACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS GCA 90 bp | CTAGGTAGGCAGAGTCTGGGGAAAAGCAACAGACGCGCACAGGGCTaGCACCCGGCTGCTCCAACACGGTCAGGGTGTGTCCGCTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: LGRQSLGKSNRRAQG*HPAAPTRSGCVRCA Trigger: CGCACAGCGGACACACCCTGACCGTGTTGGAGCAGCCGGGTGGCAGCCCTGTGCGCGTCTGTTGCTTTTCCCCAGACTCTGCCTACCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS TCA 90 bp | CGCCAACTGGTAAGACTGGAGGCCTTCTCCGCCAGAGAGAGGCTGTaGGGAAAAGCTGCAGCAGGTGATCCCGAGATCGTGCGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RQLVRLEAFSARERL*GKAAAGDPEIVRLL Trigger: GAGAAGGCGCACGATCTCGGGATCACCTGCTGCAGCTTTTCCTCACAGCCTCTCTCTGGCGGAGAAGGCCTCCAGTCTTACCAGTTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000133809.3 ENSMUST00000139689.8 |
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| CDS CCA 90 bp | GGGAGTACGGCAGTTCAGCAAAGTCACTTAGGGAGTACAGGCGGATaGTCTTGTCCAAGGAGCAGGTGGCCAGGAGGGCAGCCGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: GSTAVQQSHLGSTGG*SCPRSRWPGGQPRR Trigger: CCTTCTCGGCTGCCCTCCTGGCCACCTGCTCCTTGGACAAGACCATCCGCCTGTACTCCCTAAGTGACTTTGCTGAACTGCCGTACTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS TCA 90 bp | TCATTCTGTCATCCCACACTGTCAAGTCCCCGCCCGAGGAGCCAGTaGCAAAGAGGCCTCCATCGGGAGAAAACGCACAGGCCACCAATG | + |
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Preference number: 5 (lower is better) Translates to: SFCHPTLSSPRPRSQ*QRGLHREKTHRPPM Trigger: CATTGGTGGCCTGTGCGTTTTCTCCCGATGGAGGCCTCTTTGTCACTGGCTCCTCGGGCGGGGACTTGACAGTGTGGGATGACAGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000133809.3 ENSMUST00000139689.8 ENSMUST00000140475.3 |
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| CDS GCA 90 bp | GAGAGAGGCTGTGAGGAAAAGCTGCAGCAGGTGATCCCGAGATCGTaGGCCTTCTCGCTGTGTAGACACCTCATTCTGTCATCCCACACT | + |
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Preference number: 5 (lower is better) Translates to: ERGCEEKLQQVIPRS*AFSLCRHLILSSHT Trigger: AGTGTGGGATGACAGAATGAGGTGTCTACACAGCGAGAAGGCGCACGATCTCGGGATCACCTGCTGCAGCTTTTCCTCACAGCCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000133809.3 ENSMUST00000139689.8 ENSMUST00000140475.3 |
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| CDS-3UTR CAA 90 bp | GAGACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACGAGGTCTTCCAAGCCTaGAGCACGAAGCCACACGGA | + |
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Preference number: 5 (lower is better) Translates to: ETCPINWAVLELLILEIHEVFQA*STKPHG Trigger: TCCGTGTGGCTTCGTGCTCAAGGCTTGGAAGACCTC...GTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CAA 90 bp | TGCCTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATGTCGTTCATGCTTCCTaGGCAAGGTGTTTCCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: CLLSAGIKGGHHHCPAHNVVHAS*ARCFQV Trigger: GACCTGGAAACACCTTGCCAAGGAAGCATGAACGAC...ATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CAA 90 bp | TGCCTCCTGAGTGCTGGGATTAAAGGTGGGCACCACCACTGCCCTGCTCATAATATACTCCTCAGGACTTaGCTGCGCAGCCCTAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: CLLSAGIKGGHHHCPAHNILLRT*LRSPRD Trigger: ATCTCTAGGGCTGCGCAGCAAAGTCCTGAGGAGTAT...ATTATGAGCAGGGCAGTGGTGGTGCCCACCTTTAATCCCAGCACTCAGGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CAA 90 bp | GACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTGTCTCCAGCCATCGGTaGATGGCCATCTTCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: DLPYKLGCPGTPDPGDPPVSSHR*MAIFSV Trigger: GACACTGAAGATGGCCATCAACCGATGGCTGGAGAC...AGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS TCA 90 bp | GAGCACGAAGCCACACGGAGACATCCTCCTCTGACCATTCTTCAGTaGAATGTTTCAGCGGGTCGTTCATGCTTCCTGCTTGGCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: EHEATRRHPPLTILQ*NVSAGRSCFLLGKV Trigger: CACCTTGCCAAGCAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATGGTCAGAGGAGGATGTCTCCGTGTGGCTTCGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS TCA 90 bp | GTCTTCCAAGCCTTGAGCACGAAGCCACACGGAGACATCCTCCTCTaGCCATTCTTCAGTGAAATGTTTCAGCGGGTCGTTCATGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VFQALSTKPHGDILL*PFFSEMFQRVVHAS Trigger: GGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATGGTCAGAGGAGGATGTCTCCGTGTGGCTTCGTGCTCAAGGCTTGGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000139689.8 |
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| CDS-3UTR CAA 90 bp | ACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTGGGATCCAGCTTTCCATaGCTTCTCTCTCGTAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: TCPINWAVLELLILEIHLGSSFP*LLSRRS Trigger: ACTCCTACGAGAGAGAAGCAATGGAAAGCTGGATCC...CAGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS TCA 90 bp | GAGCACGAAGCCACACGGAGACATCCTCCTCTGACCATTCTTCAGTaGAATGTTTCAGCGGGTCGTTCATGCTTCCTTGGCAAGGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: EHEATRRHPPLTILQ*NVSAGRSCFLGKVF Trigger: AAACACCTTGCCAAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATGGTCAGAGGAGGATGTCTCCGTGTGGCTTCGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS TCA 90 bp | TCGATGTTGTTTGCCCTGAAAATACCGACGAGGTCTTCCAAGCCTTaGGCACGAAGCCACACGGAGACATCCTCCTCTGACCATTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SMLFALKIPTRSSKP*ARSHTETSSSDHSS Trigger: TGAAGAATGGTCAGAGGAGGATGTCTCCGTGTGGCTTCGTGCTCAAGGCTTGGAAGACCTCGTCGGTATTTTCAGGGCAAACAACATCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000139689.8 |
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| CDS TCA 90 bp | GTGGATCCAGCTTTCCATTGCTTCTCTCTCGTAGGAGTAGCCATCTaGTGCGATGACGGGGTCCTTCATGAGTTCTCTGGTTATTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VDPAFHCFSLVGVAI*CDDGVLHEFSGYWA Trigger: TGCCCAATAACCAGAGAACTCATGAAGGACCCCGTCATCGCATCAGATGGCTACTCCTACGAGAGAGAAGCAATGGAAAGCTGGATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS TCA 90 bp | TCGGTTGATGGCCATCTTCAGTGTCCTGTTTGGGGTCAGTACCAGTaGAGGGAGAGCCAAATTTGTCATGGGGCTCGTACGCTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SVDGHLQCPVWGQYQ*RESQICHGARTLLL Trigger: AAGAAGAAGCGTACGAGCCCCATGACAAATTTGGCTCTCCCTTCACTGGTACTGACCCCAAACAGGACACTGAAGATGGCCATCAACCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS CCA 90 bp | TACCACACCTATATAGTTTGTATGTCTGTGCATTCCACAAAGCAATaGATCCATCGGCAGCCCCTGACGCTAGGTAGGCAGAGTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: YHTYIVCMSVHSTKQ*IHRQPLTLGRQSLG Trigger: CCCCAGACTCTGCCTACCTAGCGTCAGGGGCTGCCGATGGATCCATTGCTTTGTGGAATGCACAGACATACAAACTATATAGGTGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS-3UTR CAA 90 bp | GACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTCTCGTACGCTTCTTCTaGTGGATCCAGCTTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: DLPYKLGCPGTPDPGDPPLVRFF*WIQLSI Trigger: AATGGAAAGCTGGATCCACAAGAAGAAGCGTACGAG...AGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CAA 90 bp | ACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTGCCACACCTATATAGTTaGTATGTCTGTGCATTCCAC | + |
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Preference number: 5 (lower is better) Translates to: TCPINWAVLELLILEIHLPHLYS*YVCAFH Trigger: GTGGAATGCACAGACATACAAACTATATAGGTGTGG...CAGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS-3UTR CAA 90 bp | ACTTGCCCTATAAACTGGGCTGTCCTGGAACTCCTGATCCTGGAGATCCACCTGCAAATGTTCACTGTCTaGTCCATTGAACCAGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: TCPINWAVLELLILEIHLQMFTV*SIEPVA Trigger: TGCTACTGGTTCAATGGACAAGACAGTGAACATTTG...CAGGTGGATCTCCAGGATCAGGAGTTCCAGGACAGCCCAGTTTATAGGGCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS CCA 90 bp | GACCATTCTTCAGTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTTaGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTTCACTGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: DHSSVKCFSGSFMLP*QGVSRSNCQMFTVL Trigger: CAAGACAGTGAACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS CCA 90 bp | CATTCTTCAGTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTGCTTaGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTTCACTGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: HSSVKCFSGSFMLPA*QGVSRSNCQMFTVL Trigger: CAAGACAGTGAACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGCAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS CCA 90 bp | TGTATGCACCACATGTGTACATCCAAATATTTGAATTTGGCCACATaGACAAGAGAGAAAGGAGACAAATACAGTAAATCCAATTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: CMHHMCTSKYLNLAT*TREKGDKYSKSNFA Trigger: AGCAAAATTGGATTTACTGTATTTGTCTCCTTTCTCTCTTGTCCATGTGGCCAAATTCAAATATTTGGATGTACACATGTGGTGCATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133809.3 |
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| CDS GCA 72 bp | GAAAAGCAACAGACGCGCACAGGGCTGCCACCCGGCTaGTCCAACACGGTCAGGGTGTGTCCGCTGTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: EKQQTRTGLPPG*SNTVRVCPLCE Trigger: CTCGCACAGCGGACACACCCTGACCGTGTTGGAGCAGCCGGGTGGCAGCCCTGTGCGCGTCTGTTGCTTTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS GCA 72 bp | CAGAGTCTGGGGAAAAGCAACAGACGCGCACAGGGCTaGCACCCGGCTGCTCCAACACGGTCAGGGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: QSLGKSNRRAQG*HPAAPTRSGCV Trigger: GACACACCCTGACCGTGTTGGAGCAGCCGGGTGGCAGCCCTGTGCGCGTCTGTTGCTTTTCCCCAGACTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS TCA 72 bp | AGGTGGCCAGGAGGGCAGCCGAGAAGGCGCAGCAGCTaGCGTCATCACCGTGATCAGCCAGCGTGTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: RWPGGQPRRRSS*RHHRDQPACES Trigger: TGATTCACACGCTGGCTGATCACGGTGATGACGTCAGCTGCTGCGCCTTCTCGGCTGCCCTCCTGGCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS CCA 72 bp | GCAGTTCAGCAAAGTCACTTAGGGAGTACAGGCGGATaGTCTTGTCCAAGGAGCAGGTGGCCAGGAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: AVQQSHLGSTGG*SCPRSRWPGGQ Trigger: CTGCCCTCCTGGCCACCTGCTCCTTGGACAAGACCATCCGCCTGTACTCCCTAAGTGACTTTGCTGAACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS CAA 90 bp | GGGCAGATGAACTCGTCAGGGATTCCGGAAGAGAGGGAATCCATCTaGGCCCTGAGCTCTTCAATACTCCTCAGGACTTTGCTGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GQMNSSGIPEERESI*ALSSSILLRTLLRS Trigger: GCTGCGCAGCAAAGTCCTGAGGAGTATTGAAGAGCTCAGGGCCAAGATGGATTCCCTCTCTTCCGGAATCCCTGACGAGTTCATCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS TCA 72 bp | TTTGCCCTGAAAATACCGACGAGGTCTTCCAAGCCTTaGGCACGAAGCCACACGGAGACATCCTCCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: FALKIPTRSSKP*ARSHTETSSSD Trigger: GTCAGAGGAGGATGTCTCCGTGTGGCTTCGTGCTCAAGGCTTGGAAGACCTCGTCGGTATTTTCAGGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000139689.8 |
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| CDS TCA 72 bp | CAGGGATTCCGGAAGAGAGGGAATCCATCTTGGCCCTaGGCTCTTCAATACTCCTCAGGACTTTGCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: QGFRKRGNPSWP*ALQYSSGLCCA Trigger: TGCGCAGCAAAGTCCTGAGGAGTATTGAAGAGCTCAGGGCCAAGATGGATTCCCTCTCTTCCGGAATCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS TCA 72 bp | GGCCATCTTCAGTGTCCTGTTTGGGGTCAGTACCAGTaGAGGGAGAGCCAAATTTGTCATGGGGCTCGTACG | + |
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Preference number: 6 (lower is better) Translates to: GHLQCPVWGQYQ*RESQICHGART Trigger: CGTACGAGCCCCATGACAAATTTGGCTCTCCCTTCACTGGTACTGACCCCAAACAGGACACTGAAGATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS GCA 72 bp | TGTGAGGAAAAGCTGCAGCAGGTGATCCCGAGATCGTaGGCCTTCTCGCTGTGTAGACACCTCATTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CEEKLQQVIPRS*AFSLCRHLILS Trigger: TGACAGAATGAGGTGTCTACACAGCGAGAAGGCGCACGATCTCGGGATCACCTGCTGCAGCTTTTCCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000133809.3 ENSMUST00000139689.8 ENSMUST00000140475.3 |
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| CDS TCA 72 bp | AACAGCCCAGAGTTTGATTTCACAGTCTTGACCACATaGCGCCAACTGGTAAGACTGGAGGCCTTCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: NSPEFDFTVLTT*RQLVRLEAFSA Trigger: GGCGGAGAAGGCCTCCAGTCTTACCAGTTGGCGTCATGTGGTCAAGACTGTGAAATCAAACTCTGGGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000133809.3 ENSMUST00000139689.8 |
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| CDS TCA 72 bp | GCCACACGGAGACATCCTCCTCTGACCATTCTTCAGTaGAATGTTTCAGCGGGTCGTTCATGCTTCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ATRRHPPLTILQ*NVSAGRSCFLG Trigger: GCCAAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATGGTCAGAGGAGGATGTCTCCGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS TCA 72 bp | GCCTTGAGCACGAAGCCACACGGAGACATCCTCCTCTaGCCATTCTTCAGTGAAATGTTTCAGCGGGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: ALSTKPHGDILL*PFFSEMFQRVV Trigger: AACGACCCGCTGAAACATTTCACTGAAGAATGGTCAGAGGAGGATGTCTCCGTGTGGCTTCGTGCTCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000139689.8 |
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| CDS CAA 90 bp | TCAGTGTCCTGTTTGGGGTCAGTACCAGTGAAGGGAGAGCCAAATTaGTCATGGGGCTCGTACGCTTCTTCTTGTGGATCCAGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SVSCLGSVPVKGEPN*SWGSYASSCGSSFP Trigger: TGGAAAGCTGGATCCACAAGAAGAAGCGTACGAGCCCCATGACAAATTTGGCTCTCCCTTCACTGGTACTGACCCCAAACAGGACACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS TCA 72 bp | GCTTTCCATTGCTTCTCTCTCGTAGGAGTAGCCATCTaGTGCGATGACGGGGTCCTTCATGAGTTCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AFHCFSLVGVAI*CDDGVLHEFSG Trigger: ACCAGAGAACTCATGAAGGACCCCGTCATCGCATCAGATGGCTACTCCTACGAGAGAGAAGCAATGGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS TCA 72 bp | GCCACACGGAGACATCCTCCTCTGACCATTCTTCAGTaGAATGTTTCAGCGGGTCGTTCATGCTTCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ATRRHPPLTILQ*NVSAGRSCFLL Trigger: AAGCAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATGGTCAGAGGAGGATGTCTCCGTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS CCA 72 bp | GGGTCAGTACCAGTGAAGGGAGAGCCAAATTTGTCATaGGGCTCGTACGCTTCTTCTTGTGGATCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GSVPVKGEPNLS*GSYASSCGSSF Trigger: AAAGCTGGATCCACAAGAAGAAGCGTACGAGCCCCATGACAAATTTGGCTCTCCCTTCACTGGTACTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS CAA 72 bp | AACTCGTCAGGGATTCCGGAAGAGAGGGAATCCATCTaGGCCCTGAGCTCTTCAATACTCCTCAGGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: NSSGIPEERESI*ALSSSILLRTL Trigger: CAAAGTCCTGAGGAGTATTGAAGAGCTCAGGGCCAAGATGGATTCCCTCTCTTCCGGAATCCCTGACGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS CAA 72 bp | GGCTCGTACGCTTCTTCTTGTGGATCCAGCTTTCCATaGCTTCTCTCTCGTAGGAGTAGCCATCTGATGCGA | + |
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Preference number: 6 (lower is better) Translates to: GSYASSCGSSFP*LLSRRSSHLMR Trigger: TCGCATCAGATGGCTACTCCTACGAGAGAGAAGCAATGGAAAGCTGGATCCACAAGAAGAAGCGTACGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS CAA 72 bp | TGTTTGGGGTCAGTACCAGTGAAGGGAGAGCCAAATTaGTCATGGGGCTCGTACGCTTCTTCTTGTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: CLGSVPVKGEPN*SWGSYASSCGS Trigger: GGATCCACAAGAAGAAGCGTACGAGCCCCATGACAAATTTGGCTCTCCCTTCACTGGTACTGACCCCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028368.14 |
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| CDS CAA 90 bp | AGGGAATCCATCTTGGCCCTGAGCTCTTCAATACTCCTCAGGACTTaGCTGCGCAGCCCTAGAGATTCGATTTTCAAATCACCAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RESILALSSSILLRT*LRSPRDSIFKSPAR Trigger: TCTGGCTGGTGATTTGAAAATCGAATCTCTAGGGCTGCGCAGCAAAGTCCTGAGGAGTATTGAAGAGCTCAGGGCCAAGATGGATTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS CCA 72 bp | GTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTGCTTaGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: VKCFSGSFMLPA*QGVSRSNCQMF Trigger: GAACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGCAGGAAGCATGAACGACCCGCTGAAACATTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS CAA 90 bp | CAGGCCACCAATGAGCTATCCTTGACACTACCACACCTATATAGTTaGTATGTCTGTGCATTCCACAAAGCAATGGATCCATCGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: QATNELSLTLPHLYS*YVCAFHKAMDPSAA Trigger: GGCTGCCGATGGATCCATTGCTTTGTGGAATGCACAGACATACAAACTATATAGGTGTGGTAGTGTCAAGGATAGCTCATTGGTGGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS CAA 90 bp | CCTTGGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTTCACTGTCTaGTCCATTGAACCAGTAGCAAGTAAGAGAGTGTTGGGTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PWQGVSRSNCQMFTV*SIEPVASKRVLGAN Trigger: GTTTGCACCCAACACTCTCTTACTTGCTACTGGTTCAATGGACAAGACAGTGAACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS CAA 90 bp | GCTTGGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTTCACTGTCTaGTCCATTGAACCAGTAGCAAGTAAGAGAGTGTTGGGTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: AWQGVSRSNCQMFTV*SIEPVASKRVLGAN Trigger: GTTTGCACCCAACACTCTCTTACTTGCTACTGGTTCAATGGACAAGACAGTGAACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS CAA 90 bp | CCATTCTTCAGTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTGCTaGGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTTCACTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PFFSEMFQRVVHASC*ARCFQVKLPNVHCL Trigger: AAGACAGTGAACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGCAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS TCA 72 bp | CGGGAGAAAACGCACAGGCCACCAATGAGCTATCCTTaGCACTACCACACCTATATAGTTTGTATGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: REKTHRPPMSYP*HYHTYIVCMSV Trigger: CACAGACATACAAACTATATAGGTGTGGTAGTGTCAAGGATAGCTCATTGGTGGCCTGTGCGTTTTCTCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000133809.3 ENSMUST00000140475.3 |
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| CDS GCA 72 bp | TTCAGTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTaGTTGGCAAGGTGTTTCCAGGTCAAACTGCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: FSEMFQRVVHAS*LARCFQVKLPN Trigger: ATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGCAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS CCA 72 bp | TCAGTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTTaGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SVKCFSGSFMLP*QGVSRSNCQMF Trigger: GAACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGGAAGCATGAACGACCCGCTGAAACATTTCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS CAA 72 bp | ATCTTGGCCCTGAGCTCTTCAATACTCCTCAGGACTTaGCTGCGCAGCCCTAGAGATTCGATTTTCAAATCA | + |
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Preference number: 6 (lower is better) Translates to: ILALSSSILLRT*LRSPRDSIFKS Trigger: TGATTTGAAAATCGAATCTCTAGGGCTGCGCAGCAAAGTCCTGAGGAGTATTGAAGAGCTCAGGGCCAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS CAA 72 bp | AGTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTGCTaGGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: SEMFQRVVHASC*ARCFQVKLPNV Trigger: AACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGCAGGAAGCATGAACGACCCGCTGAAACATTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139689.8 |
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| CDS CAA 72 bp | TCGGGAGAAAACGCACAGGCCACCAATGAGCTATCCTaGACACTACCACACCTATATAGTTTGTATGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SGENAQATNELS*TLPHLYSLYVC Trigger: ACAGACATACAAACTATATAGGTGTGGTAGTGTCAAGGATAGCTCATTGGTGGCCTGTGCGTTTTCTCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000133809.3 ENSMUST00000140475.3 |
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| CDS CAA 72 bp | TTCAGTGAAATGTTTCAGCGGGTCGTTCATGCTTCCTaGGCAAGGTGTTTCCAGGTCAAACTGCCAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: FSEMFQRVVHAS*ARCFQVKLPNV Trigger: AACATTTGGCAGTTTGACCTGGAAACACCTTGCCAAGGAAGCATGAACGACCCGCTGAAACATTTCACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 |
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| CDS CAA 72 bp | GGTGTTTCCAGGTCAAACTGCCAAATGTTCACTGTCTaGTCCATTGAACCAGTAGCAAGTAAGAGAGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVSRSNCQMFTV*SIEPVASKRVL Trigger: CAACACTCTCTTACTTGCTACTGGTTCAATGGACAAGACAGTGAACATTTGGCAGTTTGACCTGGAAACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000139689.8 |
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| CDS GCA 72 bp | ATTTTCAAATCACCAGCCAGACTTTCCTTTGTGAGATaGAATAGTTCTTTCCCATCGATGTTGTTTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IFKSPARLSFVR*NSSFPSMLFAL Trigger: CAGGGCAAACAACATCGATGGGAAAGAACTATTGCATCTCACAAAGGAAAGTCTGGCTGGTGATTTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000139689.8 |
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| CDS CAA 90 bp | CCACATGGACAAGAGAGAAAGGAGACAAATACAGTAAATCCAATTTaGCTGTTACAGAATCCCGATGCAAGCATCTTTCCATCATGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PHGQERKETNTVNPI*LLQNPDASIFPSCE Trigger: TTCACATGATGGAAAGATGCTTGCATCGGGATTCTGTAACAGCAAAATTGGATTTACTGTATTTGTCTCCTTTCTCTCTTGTCCATGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133809.3 |
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| CDS CAA 72 bp | AATGAGCTATCCTTGACACTACCACACCTATATAGTTaGTATGTCTGTGCATTCCACAAAGCAATGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: NELSLTLPHLYS*YVCAFHKAMDP Trigger: TGGATCCATTGCTTTGTGGAATGCACAGACATACAAACTATATAGGTGTGGTAGTGTCAAGGATAGCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028368.14 ENSMUST00000102751.9 ENSMUST00000128671.2 ENSMUST00000140475.3 |
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| CDS CAA 72 bp | TGTATGCACCACATGTGTACATCCAAATATTTGAATTaGGCCACATGGACAAGAGAGAAAGGAGACAAATAC | + |
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Preference number: 6 (lower is better) Translates to: CMHHMCTSKYLN*ATWTREKGDKY Trigger: GTATTTGTCTCCTTTCTCTCTTGTCCATGTGGCCAAATTCAAATATTTGGATGTACACATGTGGTGCATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133809.3 |
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