Pregenerated sensors for WDR93 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039099Ensembl transcript IDs: ENSMUST00000035622.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTTATTTAAATGACACATCTAAGCTCCACGAGTCACTCAGTATTTaGAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: VYLNDTSKLHESLSI*RSSIPRPRWLHGVL Trigger: CAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGTCATTTAAATAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| 3UTR CCA 72 bp | CCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTaGTGTCCTGAGCAGGAGCTATGGCGTCCCGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: PQYLGPAGSMES*CPEQELWRPGC Trigger: GCACCCGGGACGCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | AAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCCATGCCAGGCAAGGCTaGGACTGGGGCCACGGCACA | + |
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Preference number: 4 (lower is better) Translates to: KVLNTSAPLAPWSLGVLSHARQG*DWGHGT Trigger: TGTGCCGTGGCCCCAGTCCCAGCCTTGCCTGGCATG...GCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | TCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGGCGTCACATCCCCGGCTCCTTaGAAGAGGAAAGCTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SAPLAPWSLGVLSRSYGVTSPAP*KRKAAK Trigger: CTTTGCAGCTTTCCTCTTCCAAGGAGCCGGGGATGT...GACGCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTCAAGCACCTTGCTGGTaGGTCCTTGGGTCCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FEGPQYLGPAGSMESWCPQAPCW*VLGSRW Trigger: CCAGCGGGACCCAAGGACCCACCAGCAAGGTGCTTG...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | GGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGACGTTCTGTCCTTCGTaGACCAGGAAGAATCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GPQYLGPAGSMESWCPEQTFCPS*TRKNRR Trigger: CCTCCGATTCTTCCTGGTGCACGAAGGACAGAACGT...CTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | AAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAAGTGGATGCTCTaGCAGAAACAGCCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KVLNTSAPLAPWSLGVLSRKWML*QKQPSG Trigger: GCCTGAGGGCTGTTTCTGCCAGAGCATCCACTTCCT...GCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | AATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATCGTGGTCTGACCATGTaGATGGGCTCCGTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NTSAPLAPWSLGVLSRSYRGLTM*MGSVKQ Trigger: CTGCTTCACGGAGCCCATCCACATGGTCAGACCACG...ATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | CCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCAAGTACTTCCGCAGCCTaGACCACTGCTCCCGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PRVTQYLKVLNTSAPLAPSTSAA*TTAPAL Trigger: AAGGGCGGGAGCAGTGGTCCAGGCTGCGGAAGTACT...TGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | ACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGGCGACAGGTGCTCTGCTTaGTGCTATCATCCACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TSAPLAPWSLGVLSRSYGDRCSA*CYHPLH Trigger: ATGAAGTGGATGATAGCAGCAAGCAGAGCACCTGTC...GCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTTGCCAACAAGCACCTTaGTGGTGGGTCCTTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: FEGPQYLGPAGSMESWCPCQQAP*WWVLGS Trigger: GGACCCAAGGACCCACCAGCAAGGTGCTTGTTGGCA...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | GCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCTGGCTGTCACCAGGTaGAGGGAAGCATCAGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: APRVTQYLKVLNTSAPLALAVTR*REASVH Trigger: GTGCACTGATGCTTCCCTCCACCTGGTGACAGCCAG...AGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | ACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGGCTGGGTCTTTGTCATCTaGATGCTCTTCTGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: TSAPLAPWSLGVLSRSYGWVFVI*MLFWKT Trigger: GGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCA...GCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | AATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATATCGGAGGAAGTGGATaGTCTGGCAGAAACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NTSAPLAPWSLGVLSRSYIGGSG*SGRNSP Trigger: AGGGCTGTTTCTGCCAGAGCATCCACTTCCTCCGAT...ATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | GGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGAGATGGAATCTCCAGTaGTCCCTTGGGAAACACAGA | + |
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Preference number: 4 (lower is better) Translates to: GPQYLGPAGSMESWCPEQRWNLQ*SLGKHR Trigger: TCTGTGTTTCCCAAGGGACCACTGGAGATTCCATCT...CTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | CTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCGTTAGAGCTGACACTTaGTCCCGAGCTCGTTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: LNTSAPLAPWSLGVLSRSVRADT*SRARFY Trigger: ATAGAAACGAGCTCGGGACCAAGTGTCAGCTCTAAC...GCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | AAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCTCTGAGACATTACAATaGGCGCAGCACAGGGCCATA | + |
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Preference number: 4 (lower is better) Translates to: KVLNTSAPLAPWSLGVLSSETLQ*AQHRAI Trigger: TATGGCCCTGTGCTGCGCCCATTGTAATGTCTCAGA...GCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | CTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTCCACTGGCAACATCTaGGAGAAGTTCACAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: LNTSAPLAPWSLGVLSRSSTGNI*EKFTAI Trigger: AATGGCTGTGAACTTCTCCCAGATGTTGCCAGTGGA...GCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | GCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCAGCAGAGTCAGGAGTaGTCAGTTGCAGCTGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: APRVTQYLKVLNTSAPLAQQSQE*SVAAVW Trigger: CCAAACAGCTGCAACTGAGCACTCCTGACTCTGCTG...AGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | ACACATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCGTCCTTGGGTCCCGCTaGCTGTCACCAGGTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: THLSSTSHSVFEGPQYLGVLGSR*LSPGGG Trigger: CCCTCCACCTGGTGACAGCCAGCGGGACCCAAGGAC...GCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | CATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCAGGCAAGGCTGGGACTaGGGCCACGGCACAAATAGC | + |
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Preference number: 4 (lower is better) Translates to: HLSSTSHSVFEGPQYLGPRQGWD*GHGTNS Trigger: GCTATTTGTGCCGTGGCCCCAGTCCCAGCCTTGCCT...GGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | AAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCTTCCTGAAGAGCTCTTaGCATCCATTGACATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KVLNTSAPLAPWSLGVLSFLKSS*HPLTWL Trigger: CAACCATGTCAATGGATGTCAAGAGCTCTTCAGGAA...GCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | AGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCGTCGAGCTGGATTTCTaGAACTGGATGGTAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: SSTSHSVFEGPQYLGPAGVELDF*NWMVDG Trigger: GCCATCTACCATCCAGTTGCAGAAATCCAGCTCGAC...GCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | GCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTAAAAGATTAGCACCATaGCAGGCAAGGCTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: APRVTQYLKVLNTSAPLAKRLAP*QARLGL Trigger: CAGTCCCAGCCTTGCCTGGCATGGTGCTAATCTTTT...AGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | AAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCCTCTTCTGGAAGACCTaGTCACATCTTTTCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: KVLNTSAPLAPWSLGVLSLFWKT*SHLFST Trigger: AGTGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAG...GCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | CCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGCCTCAGTTGGAGATaGAATCTCCAGTGGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PRVTQYLKVLNTSAPLAPCLSWR*NLQWSL Trigger: AAGGGACCACTGGAGATTCCATCTCCAACTGAGGCA...TGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | CTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCGACCGGTTAAACAGATaGTCCACCAGTTTGTTTATC | + |
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Preference number: 4 (lower is better) Translates to: LNTSAPLAPWSLGVLSRSDRLNR*STSLFI Trigger: GATAAACAAACTGGTGGACCATCTGTTTAACCGGTC...GCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | TCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGGCGTCAAAATATGGATGGTGTaGAGATACAGCAAACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SAPLAPWSLGVLSRSYGVKIWMV*RYSKQW Trigger: CCACTGTTTGCTGTATCTCCACACCATCCATATTTT...GACGCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | AGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCGCAAAGTCCCCGTTCTaGGAGATTTCCATCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSTSHSVFEGPQYLGPAGAKSPF*EISIFR Trigger: TCTGAAGATGGAAATCTCTCAGAACGGGGACTTTGC...GCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAAACACAGACAACCTaGGTTTCTGAGCCTGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FEGPQYLGPAGSMESWCPETQTT*VSEPGF Trigger: GAAACCAGGCTCAGAAACGCAGGTTGTCTGTGTTTC...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | CCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATTCAGACAGGTGCTCTaGTTGCTGCTATCATCCACT | + |
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Preference number: 4 (lower is better) Translates to: PRVTQYLKVLNTSAPLAPFRQVL*LLLSST Trigger: AGTGGATGATAGCAGCAAGCAGAGCACCTGTCTGAA...TGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | GCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTATAGCTTCTTCCATGTaGATCACAGGCCTGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: APRVTQYLKVLNTSAPLAIASSM*ITGLPT Trigger: TGTTGGCAGGCCTGTGATGCACATGGAAGAAGCTAT...AGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | ACACATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCGGTGGCCATACTGAGTaGCTCCTCTTCCCACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: THLSSTSHSVFEGPQYLGGGHTE*LLFPLP Trigger: GGGGAGTGGGAAGAGGAGCCACTCAGTATGGCCACC...GCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | ACACATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCAACAAGCACCTTGCTaGTGGGTCCTTGGGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: THLSSTSHSVFEGPQYLGQQAPC*WVLGSR Trigger: GCGGGACCCAAGGACCCACCAGCAAGGTGCTTGTTG...GCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | AATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATATCTGGATGCTCTTCTaGAAGACCTGCTCACATCTT | + |
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Preference number: 4 (lower is better) Translates to: NTSAPLAPWSLGVLSRSYIWMLF*KTCSHL Trigger: AAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGAT...ATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | AGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCGACACATGCTATTCCTaGAGAGCTCTTGACATCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSTSHSVFEGPQYLGPAGDTCYS*RALDIH Trigger: ATGGATGTCAAGAGCTCTTCAGGAATAGCATGTGTC...GCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | GCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTGTAGTCCTCTACCTTTaGAAAAACTTCCAAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: APRVTQYLKVLNTSAPLAVVLYL*KNFQGA Trigger: AGCCCCTTGGAAGTTTTTGCAAAGGTAGAGGACTAC...AGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | AATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGTGAAGCAGAAAATATaGATGGTGTGGAGATACAGC | + |
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Preference number: 4 (lower is better) Translates to: NTSAPLAPWSLGVLSRSYVKQKI*MVWRYS Trigger: GCTGTATCTCCACACCATCCATATTTTCTGCTTCAC...ATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | AATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATACATCTTTTCTCCACTaGCAACATCTGGGAGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: NTSAPLAPWSLGVLSRSYTSFLH*QHLGEV Trigger: AACTTCTCCCAGATGTTGCCAGTGGAGAAAAGATGT...ATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | GGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGTTTAAGAGTTCTTTCTaGAGCATGATGGAGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: GPQYLGPAGSMESWCPEQFKSSF*SMMEYF Trigger: GAAGTACTCCATCATGCTCCAGAAAGAACTCTTAAA...CTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | CCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCAGTGCAGATTATAGATTaGGAATCCTTTAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRVTQYLKVLNTSAPLAPVQIID*ESFKAS Trigger: GGAGGCCTTAAAGGATTCTCAATCTATAATCTGCAC...TGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTTTCAATAATTTCCCATaGCCGGTTAAACAGATGGTC | + |
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Preference number: 4 (lower is better) Translates to: FEGPQYLGPAGSMESWCPFNNFP*PVKQMV Trigger: GACCATCTGTTTAACCGGTCATGGGAAATTATTGAA...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | ACACATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCAGGTCCCACAAAATaGGCACACCATCCTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: THLSSTSHSVFEGPQYLGPGPTK*AHHPHR Trigger: TCTGTGAGGATGGTGTGCTCATTTTGTGGGACCTGG...GCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | ACACATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCGTTCTTTCTGGAGCATaGTGGAGTACTTCCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: THLSSTSHSVFEGPQYLGVLSGA*WSTSAA Trigger: GGCTGCGGAAGTACTCCATCATGCTCCAGAAAGAAC...GCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | CATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCATCCTTAGGCCAGTCTaGCTCAGTTGGAGATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: HLSSTSHSVFEGPQYLGPILRPV*LSWRWN Trigger: ATTCCATCTCCAACTGAGGCAGACTGGCCTAAGGAT...GGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | CATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGACAACCTGCGTTTCTaGGCCTGGTTTCCTTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: HLSSTSHSVFEGPQYLGPDNLRF*AWFPLK Trigger: TTTTAAAGGAAACCAGGCTCAGAAACGCAGGTTGTC...GGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR TCA 90 bp | GCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTAAGTTCACAGCCATTTaGGAAATGGTACACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: APRVTQYLKVLNTSAPLAKFTAI*EMVHFL Trigger: CAAAAAGTGTACCATTTCTCAAATGGCTGTGAACTT...AGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | CATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGTCCATTCCAGTGTATaGCAAGGACACATGCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: HLSSTSHSVFEGPQYLGPVHSSV*QGHMLF Trigger: GAATAGCATGTGTCCTTGGCATACACTGGAATGGAC...GGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | ACACATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCATCTTCAGACAGGTaGTCTGCTTGCTGCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: THLSSTSHSVFEGPQYLGPSSDR*SACCYH Trigger: ATGATAGCAGCAAGCAGAGCACCTGTCTGAAGATGG...GCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTCAGCCATTTGAGAAATaGTACACTTTTTGGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: FEGPQYLGPAGSMESWCPQPFEK*YTFWRY Trigger: ATATCTCCAAAAAGTGTACCATTTCTCAAATGGCTG...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | CATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCAGAAAACAGAATCTGTaGTCTTCTTGGGATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLSSTSHSVFEGPQYLGPRKQNL*SSWDLQ Trigger: CTGAAGATCCCAAGAAGAGCACAGATTCTGTTTTCT...GGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR GCA 90 bp | ACACATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCTCTTTGTCATCTGGATaGTCTTCTGGAAGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THLSSTSHSVFEGPQYLGSLSSG*SSGRPA Trigger: AGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGA...GCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | CAGGCCTGCCAACAAGCACCTTGCTGGTGGGTCCTTGGGTCCCGCTaGCTGTCACCAGGTGGAGGGAAGCATCAGTGCACAGCACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: QACQQAPCWWVLGSR*LSPGGGKHQCTAPH Trigger: GTGTGGTGCTGTGCACTGATGCTTCCCTCCACCTGGTGACAGCCAGCGGGACCCAAGGACCCACCAGCAAGGTGCTTGTTGGCAGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | TGTGGAGATACAGCAAACAGTGGCTTCCAGGGCAGCGCCTGCGGGTaGCATGTCGGGGCCGAAAAGGCACAGAGGACCTCAGCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGDTANSGFQGSACG*HVGAEKAQRTSALA Trigger: GGCCAAGGCTGAGGTCCTCTGTGCCTTTTCGGCCCCGACATGCCACCCGCAGGCGCTGCCCTGGAAGCCACTGTTTGCTGTATCTCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | ACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGGCCTGCCAACAAGCACCTaGCTGGTGGGTCCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSAPLAPWSLGVLSRSYGLPTST*LVGPWV Trigger: GACCCAAGGACCCACCAGCAAGGTGCTTGTTGGCAG...GCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGGCGAAGGTCTCCATGTGTaGCTCCCACTGCACATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSAPLAPWSLGVLSRSYGEGLHV*LPLHIL Trigger: AAGGATGTGCAGTGGGAGCAACACATGGAGACCTTC...GCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | GCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCAGAGGACCTCAGCCTaGGCCACGTCCATGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: APRVTQYLKVLNTSAPLAQRTSA*ATSMRV Trigger: AACCCTCATGGACGTGGCCAAGGCTGAGGTCCTCTG...AGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS CCA 90 bp | GGGTACACGTTCTGTCCTTCGTGCACCAGGAAGAATCGGAGGAAGTaGATGCTCTGGCAGAAACAGCCCTCAGGCAGAGCAACCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GYTFCPSCTRKNRRK*MLWQKQPSGRATTP Trigger: TGGGGTGGTTGCTCTGCCTGAGGGCTGTTTCTGCCAGAGCATCCACTTCCTCCGATTCTTCCTGGTGCACGAAGGACAGAACGTGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | ACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCTATGGCATACCACCAGGCATTTaGTCGAGCTGGATTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSAPLAPWSLGVLSRSYGIPPGI*SSWISA Trigger: TGCAGAAATCCAGCTCGACAAAATGCCTGGTGGTAT...GCCATAGCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | CTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCAGGAGCAGACAGGTGCTCTGCTaGCTGCTATCATCCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNTSAPLAPWSLGVLSRSRQVLC*LLSSTS Trigger: TGAAGTGGATGATAGCAGCAAGCAGAGCACCTGTCT...GCTCCTGCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS TCA 90 bp | GCACACCATCCTCACAGACGAGGGCCAGGTAGGAGGAGAAGCTGCTaGTCTGAGACATTACAATGGGCGCAGCACAGGGCCATACGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHHPHRRGPGRRRSC*SETLQWAQHRAIRS Trigger: AGAACGTATGGCCCTGTGCTGCGCCCATTGTAATGTCTCAGATCAGCAGCTTCTCCTCCTACCTGGCCCTCGTCTGTGAGGATGGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS TCA 90 bp | GAGCAACCACCCCAAAGAGGAATCCTTCAGCCAGGTCCCACAAAATaGGCACACCATCCTCACAGACGAGGGCCAGGTAGGAGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EQPPQRGILQPGPTK*AHHPHRRGPGRRRS Trigger: GCTTCTCCTCCTACCTGGCCCTCGTCTGTGAGGATGGTGTGCTCATTTTGTGGGACCTGGCTGAAGGATTCCTCTTTGGGGTGGTTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | GCACAGAGGACCTCAGCCTTGGCCACGTCCATGAGGGTTACAGATTaGCTCCTGGAAAAGATTAGCACCATGCCAGGCAAGGCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AQRTSALATSMRVTD*LLEKISTMPGKAGT Trigger: AGTCCCAGCCTTGCCTGGCATGGTGCTAATCTTTTCCAGGAGCCAATCTGTAACCCTCATGGACGTGGCCAAGGCTGAGGTCCTCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | CTGACCATGTGGATGGGCTCCGTGAAGCAGAAAATATGGATGGTGTaGAGATACAGCAAACAGTGGCTTCCAGGGCAGCGCCTGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTMWMGSVKQKIWMV*RYSKQWLPGQRLRV Trigger: CACCCGCAGGCGCTGCCCTGGAAGCCACTGTTTGCTGTATCTCCACACCATCCATATTTTCTGCTTCACGGAGCCCATCCACATGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS GCA 90 bp | ACACGTTCTGTCCTTCGTGCACCAGGAAGAATCGGAGGAAGTGGATaGTCTGGCAGAAACAGCCCTCAGGCAGAGCAACCACCCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRSVLRAPGRIGGSG*SGRNSPQAEQPPQR Trigger: TCTTTGGGGTGGTTGCTCTGCCTGAGGGCTGTTTCTGCCAGAGCATCCACTTCCTCCGATTCTTCCTGGTGCACGAAGGACAGAACGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | AGCCTGGACCACTGCTCCCGCCCTTTCATCTGGGTCTTTGTCATCTaGATGCTCTTCTGGAAGACCTGCTCACATCTTTTCTCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLDHCSRPFIWVFVI*MLFWKTCSHLFSTG Trigger: GCCAGTGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCAGATGAAAGGGCGGGAGCAGTGGTCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | ATGGAGTACTTCCGCAGCCTGGACCACTGCTCCCGCCCTTTCATCTaGGTCTTTGTCATCTGGATGCTCTTCTGGAAGACCTGCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: MEYFRSLDHCSRPFI*VFVIWMLFWKTCSH Trigger: ATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCAGATGAAAGGGCGGGAGCAGTGGTCCAGGCTGCGGAAGTACTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCCGTAGTCCTCTACCTTaGCAAAAACTTCCAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTSHSVFEGPQYLGPAGRSPLP*QKLPRG Trigger: GCCCCTTGGAAGTTTTTGCAAAGGTAGAGGACTACG...GCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | CATCTAAGCTCCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCCAGTCTGCCTCAGTaGGAGATGGAATCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLSSTSHSVFEGPQYLGPASLPQ*EMESPV Trigger: CACTGGAGATTCCATCTCCAACTGAGGCAGACTGGC...GGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGGAGCTTAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | CCACGAGTCACTCAGTATTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCAAAGGGAATCCAGCTCTaGATCCAAGTCCTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRVTQYLKVLNTSAPLAPKGIQL*IQVLED Trigger: GTCTTCAAGGACTTGGATCAAGAGCTGGATTCCCTT...TGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAATACTGAGTGACTCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAATCTGTGCTCTTCTaGGGATCTTCAGTAGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: FEGPQYLGPAGSMESWCPESVLF*GSSVDV Trigger: CACGTCTACTGAAGATCCCAAGAAGAGCACAGATTC...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS TCA 90 bp | ACATCCCCGGCTCCTTGGAAGAGGAAAGCTGCAAAGTCCCCGTTCTaGGAGATTTCCATCTTCAGACAGGTGCTCTGCTTGCTGCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: TSPAPWKRKAAKSPF*EISIFRQVLCLLLS Trigger: TGATAGCAGCAAGCAGAGCACCTGTCTGAAGATGGAAATCTCTCAGAACGGGGACTTTGCAGCTTTCCTCTTCCAAGGAGCCGGGGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | TGCTCCCGCCCTTTCATCTGGGTCTTTGTCATCTGGATGCTCTTCTaGAAGACCTGCTCACATCTTTTCTCCACTGGCAACATCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSRPFIWVFVIWMLF*KTCSHLFSTGNIWE Trigger: CTCCCAGATGTTGCCAGTGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCAGATGAAAGGGCGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | AACAGCCATACCACCAGGCATTTTGTCGAGCTGGATTTCTGCAACTaGATGGTAGATGGCGGGCACGATCCAGTTCTTCTCAACTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NSHTTRHFVELDFCN*MVDGGHDPVLLNFP Trigger: AGGGAAGTTGAGAAGAACTGGATCGTGCCCGCCATCTACCATCCAGTTGCAGAAATCCAGCTCGACAAAATGCCTGGTGGTATGGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | TTAGAGTCGATTGGGGGTGCTCCATTTCCTTTAGCCAAATCTCCTTaGGCAACTTATACACTTCCAGCCAGACATCCCCGGCTCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LESIGGAPFPLAKSP*ATYTLPARHPRLLG Trigger: TCCAAGGAGCCGGGGATGTCTGGCTGGAAGTGTATAAGTTGCCCAAGGAGATTTGGCTAAAGGAAATGGAGCACCCCCAATCGACTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTATTCCTGAAGAGCTCTaGACATCCATTGACATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FEGPQYLGPAGSMESWCPIPEEL*TSIDMV Trigger: AACCATGTCAATGGATGTCAAGAGCTCTTCAGGAAT...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | AAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAGCGAAGTTCACAGCCATTaGAGAAATGGTACACTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KVLNTSAPLAPWSLGVLSEVHSH*RNGTLF Trigger: AAAAAGTGTACCATTTCTCAAATGGCTGTGAACTTC...GCTCAGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | AAAATCCTTTTCGTCATCCTTAGGCCAGTCTGCCTCAGTTGGAGATaGAATCTCCAGTGGTCCCTTGGGAAACACAGACAACCTGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KILFVILRPVCLSWR*NLQWSLGKHRQPAF Trigger: AAACGCAGGTTGTCTGTGTTTCCCAAGGGACCACTGGAGATTCCATCTCCAACTGAGGCAGACTGGCCTAAGGATGACGAAAAGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGTCCTCAATACCTCGGCCCCGCTGGCTCCATGGAGTCTTGGTGTCCTGAAATGGTACACTTTTaGGAGATATCTTTCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FEGPQYLGPAGSMESWCPEMVHF*EISFKS Trigger: GCTCTTGAAAGATATCTCCAAAAAGTGTACCATTTC...AGGACACCAAGACTCCATGGAGCCAGCGGGGCCGAGGTATTGAGGACCTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | CATCTGGATGCTCTTCTGGAAGACCTGCTCACATCTTTTCTCCACTaGCAACATCTGGGAGAAGTTCACAGCCATTTGAGAAATGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: HLDALLEDLLTSFLH*QHLGEVHSHLRNGT Trigger: TGTACCATTTCTCAAATGGCTGTGAACTTCTCCCAGATGTTGCCAGTGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 90 bp | TCTCCACTGGCAACATCTGGGAGAAGTTCACAGCCATTTGAGAAATaGTACACTTTTTGGAGATATCTTTCAAGAGCAGGTAGTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPLATSGRSSQPFEK*YTFWRYLSRAGSPQ Trigger: TTGAGGACTACCTGCTCTTGAAAGATATCTCCAAAAAGTGTACCATTTCTCAAATGGCTGTGAACTTCTCCCAGATGTTGCCAGTGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | ACAGCAAACAGTGGCTTCCAGGGCAGCGCCTGCGGGTaGCATGTCGGGGCCGAAAAGGCACAGAGGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TANSGFQGSACG*HVGAEKAQRTS Trigger: TGAGGTCCTCTGTGCCTTTTCGGCCCCGACATGCCACCCGCAGGCGCTGCCCTGGAAGCCACTGTTTGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | TGTGCATCACAGGCCTGCCAACAAGCACCTTGCTGGTaGGTCCTTGGGTCCCGCTGGCTGTCACCAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CASQACQQAPCW*VLGSRWLSPGG Trigger: TCCACCTGGTGACAGCCAGCGGGACCCAAGGACCCACCAGCAAGGTGCTTGTTGGCAGGCCTGTGATGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS CCA 72 bp | CCATGTGCATCACAGGCCTGCCAACAAGCACCTTGCTaGTGGGTCCTTGGGTCCCGCTGGCTGTCACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PCASQACQQAPC*WVLGSRWLSPG Trigger: ACCTGGTGACAGCCAGCGGGACCCAAGGACCCACCAGCAAGGTGCTTGTTGGCAGGCCTGTGATGCACATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS GCA 72 bp | CTTCCATGTGCATCACAGGCCTGCCAACAAGCACCTTaGTGGTGGGTCCTTGGGTCCCGCTGGCTGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LPCASQACQQAP*WWVLGSRWLSP Trigger: TGGTGACAGCCAGCGGGACCCAAGGACCCACCAGCAAGGTGCTTGTTGGCAGGCCTGTGATGCACATGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | CAACAAGCACCTTGCTGGTGGGTCCTTGGGTCCCGCTaGCTGTCACCAGGTGGAGGGAAGCATCAGTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: QQAPCWWVLGSR*LSPGGGKHQCT Trigger: TGTGCACTGATGCTTCCCTCCACCTGGTGACAGCCAGCGGGACCCAAGGACCCACCAGCAAGGTGCTTGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS GCA 72 bp | GGGACTGGGGCCACGGCACAAATAGCTTCTTCCATGTaGATCACAGGCCTGCCAACAAGCACCTTGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTGATAQIASSM*ITGLPTSTLLV Trigger: CACCAGCAAGGTGCTTGTTGGCAGGCCTGTGATGCACATGGAAGAAGCTATTTGTGCCGTGGCCCCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | TCGTGCACCAGGAAGAATCGGAGGAAGTGGATGCTCTaGCAGAAACAGCCCTCAGGCAGAGCAACCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCTRKNRRKWML*QKQPSGRATTP Trigger: TGGGGTGGTTGCTCTGCCTGAGGGCTGTTTCTGCCAGAGCATCCACTTCCTCCGATTCTTCCTGGTGCACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS TCA 72 bp | CCCCAAAGAGGAATCCTTCAGCCAGGTCCCACAAAATaGGCACACCATCCTCACAGACGAGGGCCAGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQRGILQPGPTK*AHHPHRRGPGR Trigger: CCTACCTGGCCCTCGTCTGTGAGGATGGTGTGCTCATTTTGTGGGACCTGGCTGAAGGATTCCTCTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS GCA 72 bp | GGGTTACAGATTGGCTCCTGGAAAAGATTAGCACCATaGCAGGCAAGGCTGGGACTGGGGCCACGGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLQIGSWKRLAP*QARLGLGPRHK Trigger: TTTGTGCCGTGGCCCCAGTCCCAGCCTTGCCTGGCATGGTGCTAATCTTTTCCAGGAGCCAATCTGTAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS CAA 72 bp | GCCTGGACCACTGCTCCCGCCCTTTCATCTGGGTCTTaGTCATCTGGATGCTCTTCTGGAAGACCTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: AWTTAPALSSGS*SSGCSSGRPAH Trigger: GTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCAGATGAAAGGGCGGGAGCAGTGGTCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS GCA 72 bp | CAGCCAGACATCCCCGGCTCCTTGGAAGAGGAAAGCTaGAAAGTCCCCGTTCTGAGAGATTTCCATCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPDIPGSLEEES*KVPVLRDFHLQ Trigger: CTGAAGATGGAAATCTCTCAGAACGGGGACTTTGCAGCTTTCCTCTTCCAAGGAGCCGGGGATGTCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
||
| CDS CCA 72 bp | CTGCCTCAGTTGGAGATGGAATCTCCAGTGGTCCCTTaGGAAACACAGACAACCTGCGTTTCTGAGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPQLEMESPVVP*ETQTTCVSEPG Trigger: ACCAGGCTCAGAAACGCAGGTTGTCTGTGTTTCCCAAGGGACCACTGGAGATTCCATCTCCAACTGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | AGGCCAGTCTGCCTCAGTTGGAGATGGAATCTCCAGTaGTCCCTTGGGAAACACAGACAACCTGCGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RPVCLSWRWNLQ*SLGKHRQPAFL Trigger: CAGAAACGCAGGTTGTCTGTGTTTCCCAAGGGACCACTGGAGATTCCATCTCCAACTGAGGCAGACTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | TGGATGGGCTCCGTGAAGCAGAAAATATGGATGGTGTaGAGATACAGCAAACAGTGGCTTCCAGGGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: WMGSVKQKIWMV*RYSKQWLPGQR Trigger: GCGCTGCCCTGGAAGCCACTGTTTGCTGTATCTCCACACCATCCATATTTTCTGCTTCACGGAGCCCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 72 bp | CAACTTATACACTTCCAGCCAGACATCCCCGGCTCCTaGGAAGAGGAAAGCTGCAAAGTCCCCGTTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QLIHFQPDIPGS*EEESCKVPVLR Trigger: TCTCAGAACGGGGACTTTGCAGCTTTCCTCTTCCAAGGAGCCGGGGATGTCTGGCTGGAAGTGTATAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 90 bp | CCCTTCCAGGTGCTTCTTGTAGGAGGCATAGAAGGTCTCCATGTGTaGCTCCCACTGCACATCCTTGATAAAGTGATTCTGCCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: PFQVLLVGGIEGLHV*LPLHILDKVILPRA Trigger: GGCTCTGGGCAGAATCACTTTATCAAGGATGTGCAGTGGGAGCAACACATGGAGACCTTCTATGCCTCCTACAAGAAGCACCTGGAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 90 bp | TTTAGAGTCGATTGGGGGTGCTCCATTTCCTTTAGCCAAATCTCCTaGGGCAACTTATACACTTCCAGCCAGACATCCCCGGCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: FRVDWGCSISFSQIS*GNLYTSSQTSPAPW Trigger: CCAAGGAGCCGGGGATGTCTGGCTGGAAGTGTATAAGTTGCCCAAGGAGATTTGGCTAAAGGAAATGGAGCACCCCCAATCGACTCTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS TCA 72 bp | GCTCCTTGGAAGAGGAAAGCTGCAAAGTCCCCGTTCTaGGAGATTTCCATCTTCAGACAGGTGCTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: APWKRKAAKSPF*EISIFRQVLCL Trigger: CAAGCAGAGCACCTGTCTGAAGATGGAAATCTCTCAGAACGGGGACTTTGCAGCTTTCCTCTTCCAAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS GCA 72 bp | GCTCCCGCCCTTTCATCTGGGTCTTTGTCATCTGGATaGTCTTCTGGAAGACCTGCTCACATCTTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: APALSSGSLSSG*SSGRPAHIFSP Trigger: TGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCAGATGAAAGGGCGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | TTCGTCATCCTTAGGCCAGTCTGCCTCAGTTGGAGATaGAATCTCCAGTGGTCCCTTGGGAAACACAGACAA | + |
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Preference number: 6 (lower is better) Translates to: FVILRPVCLSWR*NLQWSLGKHRQ Trigger: TTGTCTGTGTTTCCCAAGGGACCACTGGAGATTCCATCTCCAACTGAGGCAGACTGGCCTAAGGATGACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | ATCCTTTTCGTCATCCTTAGGCCAGTCTGCCTCAGTTaGAGATGGAATCTCCAGTGGTCCCTTGGGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: ILFVILRPVCLS*RWNLQWSLGKH Trigger: GTGTTTCCCAAGGGACCACTGGAGATTCCATCTCCAACTGAGGCAGACTGGCCTAAGGATGACGAAAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | ATTGGGGGTGCTCCATTTCCTTTAGCCAAATCTCCTTaGGCAACTTATACACTTCCAGCCAGACATCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: IGGAPFPLAKSP*ATYTLPARHPR Trigger: CCGGGGATGTCTGGCTGGAAGTGTATAAGTTGCCCAAGGAGATTTGGCTAAAGGAAATGGAGCACCCCCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 72 bp | GATTGGGGGTGCTCCATTTCCTTTAGCCAAATCTCCTaGGGCAACTTATACACTTCCAGCCAGACATCCCCG | + |
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Preference number: 6 (lower is better) Translates to: DWGCSISFSQIS*GNLYTSSQTSP Trigger: CGGGGATGTCTGGCTGGAAGTGTATAAGTTGCCCAAGGAGATTTGGCTAAAGGAAATGGAGCACCCCCAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS GCA 72 bp | TGGGTCTTTGTCATCTGGATGCTCTTCTGGAAGACCTaGTCACATCTTTTCTCCACTGGCAACATCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: WVFVIWMLFWKT*SHLFSTGNIWE Trigger: CTCCCAGATGTTGCCAGTGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | GCTCTTCTGGAAGACCTGCTCACATCTTTTCTCCACTaGCAACATCTGGGAGAAGTTCACAGCCATTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ALLEDLLTSFLH*QHLGEVHSHLR Trigger: TCTCAAATGGCTGTGAACTTCTCCCAGATGTTGCCAGTGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CCA 72 bp | CCTTTCATCTGGGTCTTTGTCATCTGGATGCTCTTCTaGAAGACCTGCTCACATCTTTTCTCCACTGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: PFIWVFVIWMLF*KTCSHLFSTGN Trigger: GTTGCCAGTGGAGAAAAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCAGATGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 72 bp | GTGCTTCTTGTAGGAGGCATAGAAGGTCTCCATGTGTaGCTCCCACTGCACATCCTTGATAAAGTGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: VLLVGGIEGLHV*LPLHILDKVIL Trigger: CAGAATCACTTTATCAAGGATGTGCAGTGGGAGCAACACATGGAGACCTTCTATGCCTCCTACAAGAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 72 bp | TATCATTCGATAGGGCTGAGGAAGGGAATCCAGCTCTaGATCCAAGTCCTTGAAGACAAAATCCTTTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: YHSIGLRKGIQL*IQVLEDKILFV Trigger: GACGAAAAGGATTTTGTCTTCAAGGACTTGGATCAAGAGCTGGATTCCCTTCCTCAGCCCTATCGAATGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 90 bp | CAGTTTGTTTATCATTCGATAGGGCTGAGGAAGGGAATCCAGCTCTaGATCCAAGTCCTTGAAGACAAAATCCTTTTCGTCATCCTTAGG | + |
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Preference number: 6 (lower is better) Translates to: QFVYHSIGLRKGIQL*IQVLEDKILFVILR Trigger: CCTAAGGATGACGAAAAGGATTTTGTCTTCAAGGACTTGGATCAAGAGCTGGATTCCCTTCCTCAGCCCTATCGAATGATAAACAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 72 bp | TGTATGCCAAGGACACATGCTATTCCTGAAGAGCTCTaGACATCCATTGACATGGTTGTTAAGGAGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: CMPRTHAIPEEL*TSIDMVVKELV Trigger: TACTAACTCCTTAACAACCATGTCAATGGATGTCAAGAGCTCTTCAGGAATAGCATGTGTCCTTGGCATACA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 72 bp | CTCCACTGGCAACATCTGGGAGAAGTTCACAGCCATTaGAGAAATGGTACACTTTTTGGAGATATCTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LHWQHLGEVHSH*RNGTLFGDIFQ Trigger: TTGAAAGATATCTCCAAAAAGTGTACCATTTCTCAAATGGCTGTGAACTTCTCCCAGATGTTGCCAGTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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| CDS CAA 90 bp | ACATCTTTTCTCCACTGGCAACATCTGGGAGAAGTTCACAGCCATTaGAGAAATGGTACACTTTTTGGAGATATCTTTCAAGAGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: TSFLHWQHLGEVHSH*RNGTLFGDIFQEQV Trigger: TACCTGCTCTTGAAAGATATCTCCAAAAAGTGTACCATTTCTCAAATGGCTGTGAACTTCTCCCAGATGTTGCCAGTGGAGAAAAGATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035622.8 |
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