Pregenerated sensors for WDR92 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078970Ensembl transcript IDs: ENSMUST00000046955.7
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACAAAGCTGGTGCTGGTGTGTGGGGCCTTCACGTGCAGCAGCATaGTGGTCAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: EQSWCWCVGPSRAAA*WSGQQTPKDARGWL Trigger: CAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTGACCAGCATGCTGCTGCACGTGAAGGCCCCACACACCAGCACCAGCTTTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 90 bp | GCAGCATGCTGGTCAGGCCAGCAAACACCCAAAGATGCTAGAGGCTaGCTGGCTGGCTTTGTGCCCATGGCTGTCACTCATCACTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: AACWSGQQTPKDARG*LAGFVPMAVTHHSN Trigger: ATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTGACCAGCATGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 90 bp | CTGAGTAGAAACATGGGGAAAAGGAACAAAGCTGGTGCTGGTGTGTaGGGCCTTCACGTGCAGCAGCATGCTGGTCAGGCCAGCAAACAC | + |
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Preference number: 1 (lower is better) Translates to: LSRNMGKRNKAGAGV*GLHVQQHAGQASKH Trigger: GTGTTTGCTGGCCTGACCAGCATGCTGCTGCACGTGAAGGCCCCACACACCAGCACCAGCTTTGTTCCTTTTCCCCATGTTTCTACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 90 bp | CATGCTGGTCAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTaGCTGGCTTTGTGCCCATGGCTGTCACTCATCACTCAAATCCAA | + |
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Preference number: 1 (lower is better) Translates to: HAGQASKHPKMLEAG*LALCPWLSLITQIQ Trigger: TTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTGACCAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 90 bp | AAACACCCAAAGATGCTAGAGGCTGGCTGGCTGGCTTTGTGCCCATaGCTGTCACTCATCACTCAAATCCAACCGTCTTCAATGGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: KHPKMLEAGWLALCP*LSLITQIQPSSMGP Trigger: TGGCCCCATTGAAGACGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 90 bp | ATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGAAAATaGTATGAGATGCCCTGCAACTGGACTTACAGGAATTATAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: MCMCLWVPLPNTARK*YEMPCNWTYRNYKS Trigger: TGACTTATAATTCCTGTAAGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR GCA 90 bp | TGGGTACCACTGCCCAATACAGCCAGAAAATGGTATGAGATGCCCTaGAACTGGACTTACAGGAATTATAAGTCACCTGATAGAGATACT | + |
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Preference number: 1 (lower is better) Translates to: WVPLPNTARKWYEMP*NWTYRNYKSPDRDT Trigger: AGTATCTCTATCAGGTGACTTATAATTCCTGTAAGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGGTACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 90 bp | CCACTGCCCAATACAGCCAGAAAATGGTATGAGATGCCCTGCAACTaGACTTACAGGAATTATAAGTCACCTGATAGAGATACTGATGAT | + |
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Preference number: 1 (lower is better) Translates to: PLPNTARKWYEMPCN*TYRNYKSPDRDTDD Trigger: ATCATCAGTATCTCTATCAGGTGACTTATAATTCCTGTAAGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR TCA 90 bp | CTCGTCATCACTTACCACAGTCAAAAGACAACTAAGGCTGGTATCTaGGTAAACGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: LVITYHSQKTTKAGI*VNERQLEVTVFYQL Trigger: TAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCGTTTACTCAGATACCAGCCTTAGTTGTCTTTTGACTGTGGTAAGTGATGACGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCATGCTGGTCAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTGGCTGTCCAACCGTCTTCAATaGGGCCAGAGGATGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QHAGQASKHPKMLEAGWLSNRLQ*GQRMQN Trigger: GTTCTGCATCCTCTGGCCCCATTGAAGACGGTTGGA...CAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTGACCAGCATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CAA 90 bp | CAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTGGCTGGCTTaGTGCCCATGGCTGTCACTCATCACTCAAATCCAACCGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: QASKHPKMLEAGWLA*CPWLSLITQIQPSS Trigger: TGAAGACGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR GCA 90 bp | GTCTGTGGGTACCACTGCCCAATACAGCCAGAAAATGGTATGAGATGCCCTGCATCACGTGCAGCAGCATaGTGGTCAGGCCAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: VCGYHCPIQPENGMRCPASRAAA*WSGQQT Trigger: TGTTTGCTGGCCTGACCAGCATGCTGCTGCACGTGA...TGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGGTACCCACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTGGCTGGCTGGCTTTGTGCCCATGGCTGTCACTCATCACTCAAATCCAAAATGGGGCCAGAGGATaGAGAACACAGATCAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: EAGWLALCPWLSLITQIQNGARG*RTQIKL Trigger: TAACTTGATCTGTGTTCTGCATCCTCTGGCCCCATT...TTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR CCA 90 bp | CGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTGAAAACAGTTCGTGCAGCAGCATGCTaGTCAGGCCAGCAAACACCC | + |
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Preference number: 2 (lower is better) Translates to: RETAGSHSILPVTLLKTVRAAAC*SGQQTP Trigger: GGGTGTTTGCTGGCCTGACCAGCATGCTGCTGCACG...AACTGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR GCA 90 bp | AATTCAATCTTCAACGGCTCGTCATCACTTACCACAGTCAAAAGACAACTAAGGGGCTGGCTGGCTTTGTaGCCATGGCTGTCACTCATC | + |
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Preference number: 2 (lower is better) Translates to: NSIFNGSSSLTTVKRQLRGWLAL*PWLSLI Trigger: GATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCC...CCTTAGTTGTCTTTTGACTGTGGTAAGTGATGACGAGCCGTTGAAGATTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTAAGAATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGAAATCTTATGGACTACATTaGTCCTCCTGCCTCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: ISKNVHVSVGTTAQYSQKSYGLH*SSCLSL Trigger: CAAGCTGAGGCAGGAGGATCAATGTAGTCCATAAGA...TTTCTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACATTCTTAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR CCA 90 bp | ACGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTGAAAACAGTCTGGCTTTGTGCCCATaGCTGTCACTCATCACTCAA | + |
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Preference number: 2 (lower is better) Translates to: TRDSWKSQYFTSYTAENSLALCP*LSLITQ Trigger: TTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAG...ACTGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTAAAAACAAATTCAATCTTCAACGGCTCGTCATCACTTACCACAGTCAAATGCTAGAGGCTGGCTaGCTGGCTTTGTGCCCATGG | + |
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Preference number: 2 (lower is better) Translates to: RFKNKFNLQRLVITYHSQMLEAG*LALCPW Trigger: CCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCAT...TTGACTGTGGTAAGTGATGACGAGCCGTTGAAGATTGAATTTGTTTTTAAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR CCA 90 bp | ACGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTGAAAACAGTAATACAGCCAGAAAATaGTATGAGATGCCCTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: TRDSWKSQYFTSYTAENSNTARK*YEMPCN Trigger: GTTGCAGGGCATCTCATACCATTTTCTGGCTGTATT...ACTGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR CCA 90 bp | AAAAACAAATTCAATCTTCAACGGCTCGTCATCACTTACCACAGTCAAAAGACAGAGATGCCCTGCAACTaGACTTACAGGAATTATAAG | + |
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Preference number: 2 (lower is better) Translates to: KNKFNLQRLVITYHSQKTEMPCN*TYRNYK Trigger: CTTATAATTCCTGTAAGTCCAGTTGCAGGGCATCTC...TGTCTTTTGACTGTGGTAAGTGATGACGAGCCGTTGAAGATTGAATTTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR GCA 72 bp | GGAACAAAGCTGGTGCTGGTGTGTGGGGCCTTCACGTaGAGCAGCATGCTGGTCAGGCCAGCAAACACCCAA | + |
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Preference number: 3 (lower is better) Translates to: GTKLVLVCGAFT*SSMLVRPANTQ Trigger: TTGGGTGTTTGCTGGCCTGACCAGCATGCTGCTGCACGTGAAGGCCCCACACACCAGCACCAGCTTTGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR GCA 72 bp | TGGTGCTGGTGTGTGGGGCCTTCACGTGCAGCAGCATaGTGGTCAGGCCAGCAAACACCCAAAGATGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: WCWCVGPSRAAA*WSGQQTPKDAR Trigger: TCTAGCATCTTTGGGTGTTTGCTGGCCTGACCAGCATGCTGCTGCACGTGAAGGCCCCACACACCAGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 72 bp | AACATGGGGAAAAGGAACAAAGCTGGTGCTGGTGTGTaGGGCCTTCACGTGCAGCAGCATGCTGGTCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: NMGKRNKAGAGV*GLHVQQHAGQA Trigger: GGCCTGACCAGCATGCTGCTGCACGTGAAGGCCCCACACACCAGCACCAGCTTTGTTCCTTTTCCCCATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 72 bp | CAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTaGCTGGCTTTGTGCCCATGGCTGTCACTCATCACT | + |
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Preference number: 3 (lower is better) Translates to: QASKHPKMLEAG*LALCPWLSLIT Trigger: AGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR GCA 72 bp | CACCCAAAGATGCTAGAGGCTGGCTGGCTGGCTTTGTaGCCATGGCTGTCACTCATCACTCAAATCCAACCG | + |
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Preference number: 3 (lower is better) Translates to: HPKMLEAGWLAL*PWLSLITQIQP Trigger: CGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 72 bp | AAGATGCTAGAGGCTGGCTGGCTGGCTTTGTGCCCATaGCTGTCACTCATCACTCAAATCCAACCGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: KMLEAGWLALCP*LSLITQIQPSS Trigger: TGAAGACGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTCTAGCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR TCA 72 bp | ACCGTGTTCTTCTGGAGCTTTACAGAGCAAGTGAAGTaGCTCCGAGTAGGAGCACAGTGTACAGAGAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: TVFFWSFTEQVK*LRVGAQCTEKA Trigger: TGCTTTCTCTGTACACTGTGCTCCTACTCGGAGTCACTTCACTTGCTCTGTAAAGCTCCAGAAGAACACGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR TCA 72 bp | CAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTaGAAACAGTTCTCCAGGCTGGCTAGTCGAACCGTG | + |
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Preference number: 3 (lower is better) Translates to: QLEVTVFYQLHC*KQFSRLASRTV Trigger: CACGGTTCGACTAGCCAGCCTGGAGAACTGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 72 bp | GGCTGTCACTCATCACTCAAATCCAACCGTCTTCAATaGGGCCAGAGGATGCAGAACACAGATCAAGTTACA | + |
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Preference number: 3 (lower is better) Translates to: GCHSSLKSNRLQ*GQRMQNTDQVT Trigger: TGTAACTTGATCTGTGTTCTGCATCCTCTGGCCCCATTGAAGACGGTTGGATTTGAGTGATGAGTGACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 72 bp | TGTCTGTGGGTACCACTGCCCAATACAGCCAGAAAATaGTATGAGATGCCCTGCAACTGGACTTACAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: CLWVPLPNTARK*YEMPCNWTYRN Trigger: ATTCCTGTAAGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGGTACCCACAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 72 bp | AGTCTCACTATGCTGCCCAAGCTAGTCTTGATCTTATaGACTACATTGATCCTCCTGCCTCAGCTTGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: SLTMLPKLVLIL*TTLILLPQLVK Trigger: CTTAACAAGCTGAGGCAGGAGGATCAATGTAGTCCATAAGATCAAGACTAGCTTGGGCAGCATAGTGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR TCA 72 bp | CAGAGGATGCAGAACACAGATCAAGTTACAGTTCTGTaGGCAACCCTCTGGACAATGTCAAGTGTAAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: QRMQNTDQVTVL*ATLWTMSSVKS Trigger: AGACTTTACACTTGACATTGTCCAGAGGGTTGCTCACAGAACTGTAACTTGATCTGTGTTCTGCATCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR GCA 72 bp | CTGCCCAATACAGCCAGAAAATGGTATGAGATGCCCTaGAACTGGACTTACAGGAATTATAAGTCACCTGAT | + |
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Preference number: 3 (lower is better) Translates to: LPNTARKWYEMP*NWTYRNYKSPD Trigger: ATCAGGTGACTTATAATTCCTGTAAGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR GCA 72 bp | TACCACTGCCCAATACAGCCAGAAAATGGTATGAGATaGCCTGCAACTGGACTTACAGGAATTATAAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: YHCPIQPENGMR*PATGLTGIISH Trigger: GTGACTTATAATTCCTGTAAGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR-3UTR CAA 90 bp | ACGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTGAAAACAGTATCTTATGGACTACATaGATCCTCCTGCCTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: TRDSWKSQYFTSYTAENSILWTT*ILLPQL Trigger: AAGCTGAGGCAGGAGGATCAATGTAGTCCATAAGAT...ACTGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| 3UTR CCA 72 bp | AATACAGCCAGAAAATGGTATGAGATGCCCTGCAACTaGACTTACAGGAATTATAAGTCACCTGATAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: NTARKWYEMPCN*TYRNYKSPDRD Trigger: ATCTCTATCAGGTGACTTATAATTCCTGTAAGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | CAGCATGCTGGTCAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTGGCTGTCTCCCGCAGCAGCTTaGGGTCCCCGCGCTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: QHAGQASKHPKMLEAGWLSPAAA*GPRAGS Trigger: AGATCCAGCGCGGGGACCTCAAGCTGCTGCGGGAGA...CAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTGACCAGCATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | GGTCAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTGGCTGGCTTTGTGCTCTCTGCTGCAGAGATaGGGCACCAAATGTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: GQASKHPKMLEAGWLALCSLLQR*GTKCST Trigger: TGTGGAACATTTGGTGCCGCATCTCTGCAGCAGAGA...GCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGCTGGCTGGCTTTGTGCCCATGGCTGTCACTCATCACTCAAATCCAATTGAGGTCCCCGCGCTaGATCTCGTACACCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: EAGWLALCPWLSLITQIQLRSPR*ISYTWI Trigger: TATCCAGGTGTACGAGATCCAGCGCGGGGACCTCAA...TTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | GGTCAGGCCAGCAAACACCCAAAGATGCTAGAGGCTGGCTGGCTGGCTTTGTGCCTCGGAATCTTTCTTTaGCCGCTGAGTTGGGTATTC | + |
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Preference number: 4 (lower is better) Translates to: GQASKHPKMLEAGWLALCLGIFL*PLSWVF Trigger: GAATACCCAACTCAGCGGTCAAAGAAAGATTCCGAG...GCACAAAGCCAGCCAGCCAGCCTCTAGCATCTTTGGGTGTTTGCTGGCCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | GTGCCCATGGCTGTCACTCATCACTCAAATCCAACCGTCTTCAATGGGGCCAGATGCAGGGCACCCATTTaGTGTCGAACACTGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VPMAVTHHSNPTVFNGARCRAPI*CRTLCS Trigger: ACTACACAGTGTTCGACAGCAAATGGGTGCCCTGCA...TCTGGCCCCATTGAAGACGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | ATTTCTAAGAATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGAAATCATACTTCCAGAGGTaGAGACTCCCAGCGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ISKNVHVSVGTTAQYSQKSYFQR*RLPAPP Trigger: GGGAGGCGCTGGGAGTCTTCACCTCTGGAAGTATGA...TTTCTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACATTCTTAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | GTCTGTGGGTACCACTGCCCAATACAGCCAGAAAATGGTATGAGATGCCCTGCATTTGAATGTGGACAATaGTCTGAGGCTTCTCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: VCGYHCPIQPENGMRCPAFECGQ*SEASRR Trigger: CCTTCGAGAAGCCTCAGATCATTGTCCACATTCAAA...TGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGGTACCCACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | GTGCCCATGGCTGTCACTCATCACTCAAATCCAACCGTCTTCAATGGGGCCAGATCTTTCTTTGACCGCTaGGTTGGGTATTCATACTTC | + |
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Preference number: 4 (lower is better) Translates to: VPMAVTHHSNPTVFNGARSFFDR*VGYSYF Trigger: GAAGTATGAATACCCAACTCAGCGGTCAAAGAAAGA...TCTGGCCCCATTGAAGACGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | GCAGAACACAGATCAAGTTACAGTTCTGTGAGCAACCCTCTGGACAATGTCAAGCACCATCTGGTCAAATaGACTACAGACGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: AEHRSSYSSVSNPLDNVKHHLVK*TTDAEP Trigger: GGGCTCTGCGTCTGTAGTTCATTTGACCAGATGGTG...CTTGACATTGTCCAGAGGGTTGCTCACAGAACTGTAACTTGATCTGTGTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | GTACCACTGCCCAATACAGCCAGAAAATGGTATGAGATGCCCTGCAACTGGACTGCTAAGAATCTCTGCTaGAGAGATGCGGCACCAAAT | + |
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Preference number: 4 (lower is better) Translates to: VPLPNTARKWYEMPCNWTAKNLC*RDAAPN Trigger: ATTTGGTGCCGCATCTCTGCAGCAGAGATTCTTAGC...AGTCCAGTTGCAGGGCATCTCATACCATTTTCTGGCTGTATTGGGCAGTGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | GCTGGCTTTGTGCCCATGGCTGTCACTCATCACTCAAATCCAACCGTCTTCAATGGACTTGCCATACAGTaGATTTATGGGCCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AGFVPMAVTHHSNPTVFNGLAIQ*IYGPFL Trigger: CAGAAAAGGCCCATAAATCCACTGTATGGCAAGTCC...ATTGAAGACGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | ATTATAAGTCACCTGATAGAGATACTGATGATCAAACTTGGGTCTCATCCAACTCGTTCTGCAGAAGGCTaGCGGAACCTGCGACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: IISHLIEILMIKLGSHPTRSAEG*RNLRLP Trigger: TGGGAGTCGCAGGTTCCGTCAGCCTTCTGCAGAACG...AGTTGGATGAGACCCAAGTTTGATCATCAGTATCTCTATCAGGTGACTTATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | ATTTCTAAGAATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGAAAGTAGCTAAGAATCTCTaGTGCAGAGATGCGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ISKNVHVSVGTTAQYSQKVAKNL*CRDAAP Trigger: TGGTGCCGCATCTCTGCAGCAGAGATTCTTAGCTAC...TTTCTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACATTCTTAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | TCTTCAATGGGGCCAGAGGATGCAGAACACAGATCAAGTTACAGTTCTGTGAGCATAAGCATTGCCAAATaGCACGGTCCAACAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSMGPEDAEHRSSYSSVSISIAK*HGPTVS Trigger: AGAGACTGTTGGACCGTGGCATTTGGCAATGCTTAT...GCTCACAGAACTGTAACTTGATCTGTGTTCTGCATCCTCTGGCCCCATTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | AAAACAAATTCAATCTTCAACGGCTCGTCATCACTTACCACAGTCAAAAGACAATGGATCTCGTACACCTaGATAACGCCGGTGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTNSIFNGSSSLTTVKRQWISYT*ITPVPR Trigger: CCGGGGCACCGGCGTTATCCAGGTGTACGAGATCCA...TTGTCTTTTGACTGTGGTAAGTGATGACGAGCCGTTGAAGATTGAATTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | TCTTCAATGGGGCCAGAGGATGCAGAACACAGATCAAGTTACAGTTCTGTGAGCCTTGATTATAAGCATTaGCAAATGCCACGGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSMGPEDAEHRSSYSSVSLDYKH*QMPRSN Trigger: GTTGGACCGTGGCATTTGGCAATGCTTATAATCAAG...GCTCACAGAACTGTAACTTGATCTGTGTTCTGCATCCTCTGGCCCCATTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | TTAATTTCTAAGAATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGAGCACACGCACCATCTaGTCAAATGAACTACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LISKNVHVSVGTTAQYSQSTRTI*SNELQT Trigger: CGTCTGTAGTTCATTTGACCAGATGGTGCGTGTGCT...CTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACATTCTTAGAAATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | ATGATCAAACTTGGGTCTCATCCAACTATATTTAAAGGCAGAGTCTCACTATGCCCATCGTCACGAATTTaGCACTGCAGGGCACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: MIKLGSHPTIFKGRVSLCPSSRI*HCRAPI Trigger: AATGGGTGCCCTGCAGTGCCAAATTCGTGACGATGG...GCATAGTGAGACTCTGCCTTTAAATATAGTTGGATGAGACCCAAGTTTGATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | AAACGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTGAAAACAAAGCCCTTGGTAGGATaGTGTGTTCTCATGTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRETAGSHSILPVTLLKTKPLVG*CVLMSK Trigger: CTTCGACATGAGAACACAGCATCCTACCAAGGGCTT...TGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | TGCAACTGGACTTACAGGAATTATAAGTCACCTGATAGAGATACTGATGATCAAGGCAGGTGCCGGACTTaGCATACAGTGGATTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: CNWTYRNYKSPDRDTDDQGRCRT*HTVDLW Trigger: CCATAAATCCACTGTATGGCAAGTCCGGCACCTGCC...TTGATCATCAGTATCTCTATCAGGTGACTTATAATTCCTGTAAGTCCAGTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | ATTTCTAAGAATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGAAAATACACTGGCATCTCTaGAGCTTCCAAGTTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKNVHVSVGTTAQYSQKIHWHL*SFQVPY Trigger: ATATGGAACTTGGAAGCTCCAGAGATGCCAGTGTAT...TTTCTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACATTCTTAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | TGCAACTGGACTTACAGGAATTATAAGTCACCTGATAGAGATACTGATGATCAATCACGAATTTGGCACTaGAGGGCACCCATTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CNWTYRNYKSPDRDTDDQSRIWH*RAPICC Trigger: ACAGCAAATGGGTGCCCTGCAGTGCCAAATTCGTGA...TTGATCATCAGTATCTCTATCAGGTGACTTATAATTCCTGTAAGTCCAGTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | ATGATCAAACTTGGGTCTCATCCAACTATATTTAAAGGCAGAGTCTCACTATGCACAGGATCCTCTTTTTaGCTTGGGTCCCACACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MIKLGSHPTIFKGRVSLCTGSSF*LGSHTF Trigger: AAAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGT...GCATAGTGAGACTCTGCCTTTAAATATAGTTGGATGAGACCCAAGTTTGATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | GCAGAACACAGATCAAGTTACAGTTCTGTGAGCAACCCTCTGGACAATGTCAAGCATACAGTGGATTTATaGGCCTTTTCTGTAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AEHRSSYSSVSNPLDNVKHTVDL*AFSVTE Trigger: TTCTGTTACAGAAAAGGCCCATAAATCCACTGTATG...CTTGACATTGTCCAGAGGGTTGCTCACAGAACTGTAACTTGATCTGTGTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR TCA 90 bp | AAAAACAAATTCAATCTTCAACGGCTCGTCATCACTTACCACAGTCAAAAGACACGAACACTGTGTAGTTaGGGCCCTTTTGAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNKFNLQRLVITYHSQKTRTLCS*GPFECG Trigger: TCCACATTCAAAAGGGCCTCAACTACACAGTGTTCG...TGTCTTTTGACTGTGGTAAGTGATGACGAGCCGTTGAAGATTGAATTTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR GCA 90 bp | AAAAACAAATTCAATCTTCAACGGCTCGTCATCACTTACCACAGTCAAAAGACACTTGTTTTCTCCTTGTaGAGGTTCCATGTTAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNKFNLQRLVITYHSQKTLVFSL*RFHVSD Trigger: GTCGCTAACATGGAACCTGCACAAGGAGAAAACAAG...TGTCTTTTGACTGTGGTAAGTGATGACGAGCCGTTGAAGATTGAATTTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CCA 90 bp | AGGTTTAAAAACAAATTCAATCTTCAACGGCTCGTCATCACTTACCACAGTCAAATCCTCTTTTTGCCTTaGGTCCCACACCTTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RFKNKFNLQRLVITYHSQILFLP*VPHLYS Trigger: ACTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGAT...TTGACTGTGGTAAGTGATGACGAGCCGTTGAAGATTGAATTTGTTTTTAAACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 90 bp | ATCTCCCGCAGCAGCTTGAGGTCCCCGCGCTGGATCTCGTACACCTaGATAACGCCGGTGCCCCGGGCAAAGTTGCCCATCGTCACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISRSSLRSPRWISYT*ITPVPRAKLPIVTN Trigger: ATTCGTGACGATGGGCAACTTTGCCCGGGGCACCGGCGTTATCCAGGTGTACGAGATCCAGCGCGGGGACCTCAAGCTGCTGCGGGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS TCA 90 bp | CAGAGCCCCCTTTTGTCAGGACTCCAGTCCAAACTGGAGATGGGCTaGGTAGACACGGTCACGTTCTGCAGAAGGCTGACGGAACCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QSPLLSGLQSKLEMG*VDTVTFCRRLTEPA Trigger: CGCAGGTTCCGTCAGCCTTCTGCAGAACGTGACCGTGTCTACTCAGCCCATCTCCAGTTTGGACTGGAGTCCTGACAAAAGGGGGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS TCA 90 bp | GACGGAACCTGCGACTCCCATCTCCAAGCCCTCGGAATCTTTCTTTaGCCGCTGAGTTGGGTATTCATACTTCCAGAGGTGAAGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DGTCDSHLQALGIFL*PLSWVFILPEVKTP Trigger: GGGAGTCTTCACCTCTGGAAGTATGAATACCCAACTCAGCGGTCAAAGAAAGATTCCGAGGGCTTGGAGATGGGAGTCGCAGGTTCCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 90 bp | TCCTTGTGCAGGTTCCATGTTAGCGACAGGATCCTCTTTTTGCCTTaGGTCCCACACCTTTACAGTTCCATCACGGCTGCCCGTCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLCRFHVSDRILFLP*VPHLYSSITAARHD Trigger: ATCGTGACGGGCAGCCGTGATGGAACTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGTCGCTAACATGGAACCTGCACAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | GTGCCCATGGCTGTCACTCATCACTCAAATCCAACCGTCTTCAATGGGGCCAGAGACAGGATCCTCTTTTaGCCTTGGGTCCCACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPMAVTHHSNPTVFNGARDRILF*PWVPHL Trigger: AAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGTC...TCTGGCCCCATTGAAGACGGTTGGATTTGAGTGATGAGTGACAGCCATGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS GCA 90 bp | TTTTCTCCTTGTGCAGGTTCCATGTTAGCGACAGGATCCTCTTTTTaGCTTGGGTCCCACACCTTTACAGTTCCATCACGGCTGCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSPCAGSMLATGSSF*LGSHTFTVPSRLPV Trigger: GACGGGCAGCCGTGATGGAACTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGTCGCTAACATGGAACCTGCACAAGGAGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | GAGGCTGGCTGGCTGGCTTTGTGCCCATGGCTGTCACTCATCACTCAAATCCAAGTCCAACAGTCTCTCTaGTTTTCTCCTTGTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EAGWLALCPWLSLITQIQVQQSL*FSPCAG Trigger: ACCTGCACAAGGAGAAAACAAGAGAGACTGTTGGAC...TTGGATTTGAGTGATGAGTGACAGCCATGGGCACAAAGCCAGCCAGCCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS TCA 90 bp | GGTCTGGAGCTTTGTAACTATCAGCACACGCACCATCTGGTCAAATaGACTACAGACGCAGAGCCCCCTTTTGTCAGGACTCCAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GLELCNYQHTHHLVK*TTDAEPPFVRTPVQ Trigger: TTGGACTGGAGTCCTGACAAAAGGGGGCTCTGCGTCTGTAGTTCATTTGACCAGATGGTGCGTGTGCTGATAGTTACAAAGCTCCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | AAACGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTGAAAACACCCATCGTCACGAATTaGGCACTGCAGGGCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRETAGSHSILPVTLLKTPIVTN*ALQGTH Trigger: ATGGGTGCCCTGCAGTGCCAAATTCGTGACGATGGG...TGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | GCAGAACACAGATCAAGTTACAGTTCTGTGAGCAACCCTCTGGACAATGTCAAGCCACATTTAATGGGCTaGGCCTTTTCAATCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AEHRSSYSSVSNPLDNVKPHLMG*AFSISR Trigger: GCGGGAGATTGAAAAGGCCAAGCCCATTAAATGTGG...CTTGACATTGTCCAGAGGGTTGCTCACAGAACTGTAACTTGATCTGTGTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | TTAATTTCTAAGAATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGGATCCTCTTTTTGCCTaGGGTCCCACACCTTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LISKNVHVSVGTTAQYSQDPLFA*GPTPLQ Trigger: CTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGATC...CTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACATTCTTAGAAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS GCA 90 bp | GATTTATGGGCCTTTTCTGTAACAGAAGCAAAGCCCTTGGTAGGATaGTGTGTTCTCATGTCGAAGACGTGGAACTTCCCTTCTAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DLWAFSVTEAKPLVG*CVLMSKTWNFPSRD Trigger: ATCTCTAGAAGGGAAGTTCCACGTCTTCGACATGAGAACACAGCATCCTACCAAGGGCTTTGCTTCTGTTACAGAAAAGGCCCATAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 90 bp | GAAGCAAAGCCCTTGGTAGGATGCTGTGTTCTCATGTCGAAGACGTaGAACTTCCCTTCTAGAGATGTAGCTACCAACTTATTCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: EAKPLVGCCVLMSKT*NFPSRDVATNLFIL Trigger: CAGTATGAATAAGTTGGTAGCTACATCTCTAGAAGGGAAGTTCCACGTCTTCGACATGAGAACACAGCATCCTACCAAGGGCTTTGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | ATTTCTAAGAATGTGCATGTGTCTGTGGGTACCACTGCCCAATACAGCCAGAAATCTCTTGTTTTCTCCTaGTGCAGGTTCCATGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISKNVHVSVGTTAQYSQKSLVFS*CRFHVS Trigger: GCTAACATGGAACCTGCACAAGGAGAAAACAAGAGA...TTTCTGGCTGTATTGGGCAGTGGTACCCACAGACACATGCACATTCTTAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | GCAAGTGAAGTGACTCCGAGTAGGAGCACAGTGTACAGAGAAAGCACAGAGCTAGACAACACGTTCTTCTaGATTATAAGCATTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ASEVTPSRSTVYRESTELDNTFF*IISIAK Trigger: TTTGGCAATGCTTATAATCAAGAAGAACGTGTTGTC...TAGCTCTGTGCTTTCTCTGTACACTGTGCTCCTACTCGGAGTCACTTCACTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | CCTGCAACTGGACTTACAGGAATTATAAGTCACCTGATAGAGATACTGATGATCACAGAAGCAAAGCCCTaGGTAGGATGCTGTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PATGLTGIISHLIEILMITEAKP*VGCCVL Trigger: GAGAACACAGCATCCTACCAAGGGCTTTGCTTCTGT...GATCATCAGTATCTCTATCAGGTGACTTATAATTCCTGTAAGTCCAGTTGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | CGAGAGACAGCTGGAAGTCACAGTATTTTACCAGTTACACTGCTGAAAACAGTTTCTTTGACCGCTGAGTaGGGTATTCATACTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RETAGSHSILPVTLLKTVSLTAE*GIHTSR Trigger: TCTGGAAGTATGAATACCCAACTCAGCGGTCAAAGA...AACTGTTTTCAGCAGTGTAACTGGTAAAATACTGTGACTTCCAGCTGTCTCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS-3UTR CAA 90 bp | ACAGGAATTATAAGTCACCTGATAGAGATACTGATGATCAAACTTGGGTCTCATCCTCGGAATCTTTCTTaGACCGCTGAGTTGGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TGIISHLIEILMIKLGSHPRNLS*TAELGI Trigger: AATACCCAACTCAGCGGTCAAAGAAAGATTCCGAGG...ATGAGACCCAAGTTTGATCATCAGTATCTCTATCAGGTGACTTATAATTCCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 72 bp | AGCAGCTTGAGGTCCCCGCGCTGGATCTCGTACACCTaGATAACGCCGGTGCCCCGGGCAAAGTTGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSLRSPRWISYT*ITPVPRAKLPI Trigger: GATGGGCAACTTTGCCCGGGGCACCGGCGTTATCCAGGTGTACGAGATCCAGCGCGGGGACCTCAAGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | TCGTACACCTGGATAACGCCGGTGCCCCGGGCAAAGTaGCCCATCGTCACGAATTTGGCACTGCAGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SYTWITPVPRAK*PIVTNLALQGT Trigger: GGTGCCCTGCAGTGCCAAATTCGTGACGATGGGCAACTTTGCCCGGGGCACCGGCGTTATCCAGGTGTACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | CGCTGGATCTCGTACACCTGGATAACGCCGGTGCCCCGGGCAAAGTaGCCCATCGTCACGAATTTGGCACTGCAGGGCACCCATTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RWISYTWITPVPRAK*PIVTNLALQGTHLL Trigger: CAGCAAATGGGTGCCCTGCAGTGCCAAATTCGTGACGATGGGCAACTTTGCCCGGGGCACCGGCGTTATCCAGGTGTACGAGATCCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 72 bp | CGGTGCCCCGGGCAAAGTTGCCCATCGTCACGAATTTaGCACTGCAGGGCACCCATTTGCTGTCGAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: RCPGQSCPSSRI*HCRAPICCRTL Trigger: CAGTGTTCGACAGCAAATGGGTGCCCTGCAGTGCCAAATTCGTGACGATGGGCAACTTTGCCCGGGGCACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | CCGGTGCCCCGGGCAAAGTTGCCCATCGTCACGAATTaGGCACTGCAGGGCACCCATTTGCTGTCGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: PVPRAKLPIVTN*ALQGTHLLSNT Trigger: AGTGTTCGACAGCAAATGGGTGCCCTGCAGTGCCAAATTCGTGACGATGGGCAACTTTGCCCGGGGCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS GCA 72 bp | GCCTTGGGTCCCACACCTTTACAGTTCCATCACGGCTaGCCGTCACGATTTCAGGGGCTCCTTCCCCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: ALGPTPLQFHHG*PSRFQGLLPQF Trigger: GAATTGGGGAAGGAGCCCCTGAAATCGTGACGGGCAGCCGTGATGGAACTGTAAAGGTGTGGGACCCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | CTCTGCTGCAGAGATGCGGCACCAAATGTTCCACATTTAATGGGCTaGGCCTTTTCAATCTCCCGCAGCAGCTTGAGGTCCCCGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCCRDAAPNVPHLMG*AFSISRSSLRSPRW Trigger: CCAGCGCGGGGACCTCAAGCTGCTGCGGGAGATTGAAAAGGCCAAGCCCATTAAATGTGGAACATTTGGTGCCGCATCTCTGCAGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS GCA 72 bp | CCCGGGCAAAGTTGCCCATCGTCACGAATTTGGCACTaGAGGGCACCCATTTGCTGTCGAACACTGTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PGQSCPSSRIWH*RAPICCRTLCS Trigger: ACTACACAGTGTTCGACAGCAAATGGGTGCCCTGCAGTGCCAAATTCGTGACGATGGGCAACTTTGCCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS GCA 72 bp | AGACACGGTCACGTTCTGCAGAAGGCTGACGGAACCTaGGACTCCCATCTCCAAGCCCTCGGAATCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RHGHVLQKADGT*DSHLQALGIFL Trigger: AAGAAAGATTCCGAGGGCTTGGAGATGGGAGTCGCAGGTTCCGTCAGCCTTCTGCAGAACGTGACCGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | TTAATGGGCTTGGCCTTTTCAATCTCCCGCAGCAGCTaGAGGTCCCCGCGCTGGATCTCGTACACCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: LMGLAFSISRSS*RSPRWISYTWI Trigger: TATCCAGGTGTACGAGATCCAGCGCGGGGACCTCAAGCTGCTGCGGGAGATTGAAAAGGCCAAGCCCATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | CATACTTCCAGAGGTGAAGACTCCCAGCGCCTCCCGTaGTCAGAAAGATCTCCCTGTTTTGAGGCAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HTSRGEDSQRLP*SERSPCFEAGA Trigger: GGCACCTGCCTCAAAACAGGGAGATCTTTCTGACAACGGGAGGCGCTGGGAGTCTTCACCTCTGGAAGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | GTGAAGACTCCCAGCGCCTCCCGTTGTCAGAAAGATCTCCCTGTTTaGAGGCAGGTGCCGGACTTGCCATACAGTGGATTTATGGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VKTPSASRCQKDLPV*RQVPDLPYSGFMGL Trigger: AAGGCCCATAAATCCACTGTATGGCAAGTCCGGCACCTGCCTCAAAACAGGGAGATCTTTCTGACAACGGGAGGCGCTGGGAGTCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | TTGGGTATTCATACTTCCAGAGGTGAAGACTCCCAGCGCCTCCCGTaGTCAGAAAGATCTCCCTGTTTTGAGGCAGGTGCCGGACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGIHTSRGEDSQRLP*SERSPCFEAGAGLA Trigger: GGCAAGTCCGGCACCTGCCTCAAAACAGGGAGATCTTTCTGACAACGGGAGGCGCTGGGAGTCTTCACCTCTGGAAGTATGAATACCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS TCA 72 bp | CTTTTGTCAGGACTCCAGTCCAAACTGGAGATGGGCTaGGTAGACACGGTCACGTTCTGCAGAAGGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: LLSGLQSKLEMG*VDTVTFCRRLT Trigger: CGTCAGCCTTCTGCAGAACGTGACCGTGTCTACTCAGCCCATCTCCAGTTTGGACTGGAGTCCTGACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 72 bp | AGGTTCCATGTTAGCGACAGGATCCTCTTTTTGCCTTaGGTCCCACACCTTTACAGTTCCATCACGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RFHVSDRILFLP*VPHLYSSITAA Trigger: GGCAGCCGTGATGGAACTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGTCGCTAACATGGAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | GTTTTCTCCTTGTGCAGGTTCCATGTTAGCGACAGGATCCTCTTTTaGCCTTGGGTCCCACACCTTTACAGTTCCATCACGGCTGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: VFSLCRFHVSDRILF*PWVPHLYSSITAAR Trigger: ACGGGCAGCCGTGATGGAACTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGTCGCTAACATGGAACCTGCACAAGGAGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS TCA 72 bp | TGCGACTCCCATCTCCAAGCCCTCGGAATCTTTCTTTaGCCGCTGAGTTGGGTATTCATACTTCCAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CDSHLQALGIFL*PLSWVFILPEV Trigger: CACCTCTGGAAGTATGAATACCCAACTCAGCGGTCAAAGAAAGATTCCGAGGGCTTGGAGATGGGAGTCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS GCA 72 bp | TGTGCAGGTTCCATGTTAGCGACAGGATCCTCTTTTTaGCTTGGGTCCCACACCTTTACAGTTCCATCACGG | + |
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Preference number: 6 (lower is better) Translates to: CAGSMLATGSSF*LGSHTFTVPSR Trigger: CCGTGATGGAACTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGTCGCTAACATGGAACCTGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | AGAGATGCGGCACCAAATGTTCCACATTTAATGGGCTaGGCCTTTTCAATCTCCCGCAGCAGCTTGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RDAAPNVPHLMG*AFSISRSSLRS Trigger: GGACCTCAAGCTGCTGCGGGAGATTGAAAAGGCCAAGCCCATTAAATGTGGAACATTTGGTGCCGCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | CTGCGACTCCCATCTCCAAGCCCTCGGAATCTTTCTTaGACCGCTGAGTTGGGTATTCATACTTCCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LRLPSPSPRNLS*TAELGIHTSRG Trigger: ACCTCTGGAAGTATGAATACCCAACTCAGCGGTCAAAGAAAGATTCCGAGGGCTTGGAGATGGGAGTCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 72 bp | GTCTGGAGCTTTGTAACTATCAGCACACGCACCATCTaGTCAAATGAACTACAGACGCAGAGCCCCCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: VWSFVTISTRTI*SNELQTQSPLL Trigger: CAAAAGGGGGCTCTGCGTCTGTAGTTCATTTGACCAGATGGTGCGTGTGCTGATAGTTACAAAGCTCCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | TTGTGCAGGTTCCATGTTAGCGACAGGATCCTCTTTTaGCCTTGGGTCCCACACCTTTACAGTTCCATCACG | + |
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Preference number: 6 (lower is better) Translates to: LCRFHVSDRILF*PWVPHLYSSIT Trigger: CGTGATGGAACTGTAAAGGTGTGGGACCCAAGGCAAAAAGAGGATCCTGTCGCTAACATGGAACCTGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | TCTCCAAGCCCTCGGAATCTTTCTTTGACCGCTGAGTaGGGTATTCATACTTCCAGAGGTGAAGACTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPSPRNLSLTAE*GIHTSRGEDSQ Trigger: CTGGGAGTCTTCACCTCTGGAAGTATGAATACCCAACTCAGCGGTCAAAGAAAGATTCCGAGGGCTTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | AGCATTGCCAAATGCCACGGTCCAACAGTCTCTCTTGTTTTCTCCTaGTGCAGGTTCCATGTTAGCGACAGGATCCTCTTTTTGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SIAKCHGPTVSLVFS*CRFHVSDRILFLPW Trigger: CCAAGGCAAAAAGAGGATCCTGTCGCTAACATGGAACCTGCACAAGGAGAAAACAAGAGAGACTGTTGGACCGTGGCATTTGGCAATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS TCA 72 bp | CTTTGTAACTATCAGCACACGCACCATCTGGTCAAATaGACTACAGACGCAGAGCCCCCTTTTGTCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: LCNYQHTHHLVK*TTDAEPPFVRT Trigger: AGTCCTGACAAAAGGGGGCTCTGCGTCTGTAGTTCATTTGACCAGATGGTGCGTGTGCTGATAGTTACAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | TCCCGTTGTCAGAAAGATCTCCCTGTTTTGAGGCAGGTGCCGGACTaGCCATACAGTGGATTTATGGGCCTTTTCTGTAACAGAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SRCQKDLPVLRQVPD*PYSGFMGLFCNRSK Trigger: TTTGCTTCTGTTACAGAAAAGGCCCATAAATCCACTGTATGGCAAGTCCGGCACCTGCCTCAAAACAGGGAGATCTTTCTGACAACGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | CATACAGTGGATTTATGGGCCTTTTCTGTAACAGAAGCAAAGCCCTaGGTAGGATGCTGTGTTCTCATGTCGAAGACGTGGAACTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HTVDLWAFSVTEAKP*VGCCVLMSKTWNFP Trigger: AGGGAAGTTCCACGTCTTCGACATGAGAACACAGCATCCTACCAAGGGCTTTGCTTCTGTTACAGAAAAGGCCCATAAATCCACTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CCA 72 bp | CCCTTGGTAGGATGCTGTGTTCTCATGTCGAAGACGTaGAACTTCCCTTCTAGAGATGTAGCTACCAACTTA | + |
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Preference number: 6 (lower is better) Translates to: PLVGCCVLMSKT*NFPSRDVATNL Trigger: TAAGTTGGTAGCTACATCTCTAGAAGGGAAGTTCCACGTCTTCGACATGAGAACACAGCATCCTACCAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | CCATTTGCTGTCGAACACTGTGTAGTTGAGGCCCTTTaGAATGTGGACAATGATCTGAGGCTTCTCGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: PFAVEHCVVEAL*NVDNDLRLLEG Trigger: ACCTTCGAGAAGCCTCAGATCATTGTCCACATTCAAAAGGGCCTCAACTACACAGTGTTCGACAGCAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | AAATGCCACGGTCCAACAGTCTCTCTTGTTTTCTCCTaGTGCAGGTTCCATGTTAGCGACAGGATCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: KCHGPTVSLVFS*CRFHVSDRILF Trigger: AAAGAGGATCCTGTCGCTAACATGGAACCTGCACAAGGAGAAAACAAGAGAGACTGTTGGACCGTGGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | GATTTATGGGCCTTTTCTGTAACAGAAGCAAAGCCCTaGGTAGGATGCTGTGTTCTCATGTCGAAGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: DLWAFSVTEAKP*VGCCVLMSKTW Trigger: CCACGTCTTCGACATGAGAACACAGCATCCTACCAAGGGCTTTGCTTCTGTTACAGAAAAGGCCCATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 90 bp | CCAATTCCAAGTCCACCTACACCATCTATGGTATTTATGATTTCTTaGTGGCCCTTTACAGAATACACTGGCATCTCTGGAGCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PIPSPPTPSMVFMIS*WPFTEYTGISGASK Trigger: CTTGGAAGCTCCAGAGATGCCAGTGTATTCTGTAAAGGGCCACAAAGAAATCATAAATACCATAGATGGTGTAGGTGGACTTGGAATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS GCA 72 bp | AGATTTCCACCAAAATCTCCAGTAGCTAAGAATCTCTaGTGCAGAGATGCGGCACCAAATGTTCCACATTTA | + |
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Preference number: 6 (lower is better) Translates to: RFPPKSPVAKNL*CRDAAPNVPHL Trigger: TAAATGTGGAACATTTGGTGCCGCATCTCTGCAGCAGAGATTCTTAGCTACTGGAGATTTTGGTGGAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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| CDS CAA 72 bp | AGTCCACCTACACCATCTATGGTATTTATGATTTCTTaGTGGCCCTTTACAGAATACACTGGCATCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SPPTPSMVFMIS*WPFTEYTGISG Trigger: TCCAGAGATGCCAGTGTATTCTGTAAAGGGCCACAAAGAAATCATAAATACCATAGATGGTGTAGGTGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046955.7 |
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