Pregenerated sensors for WDR86 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055235Ensembl transcript IDs: ENSMUST00000068693.12, ENSMUST00000127320.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATGGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCTAGCAGGCTaGTTGAAGAGCTGGTCCCTTGCTTCCTGTCCTCTCCTAAGACCA | + |
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Preference number: 1 (lower is better) Translates to: NGEVLRGRRTSYLAG*LKSWSLASCPLLRP Trigger: TGGTCTTAGGAGAGGACAGGAAGCAAGGGACCAGCTCTTCAACCAGCCTGCTAGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CCA 90 bp | TGGGTGCGAGTGCCCATGGAGGCCAGGAGAGGGCGCTTGATCTGCTaGAACCAGAGTGATGGTTGTGACAGATTAACGTGTGTGCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: WVRVPMEARRGRLIC*NQSDGCDRLTCVLG Trigger: TCCTAGCACACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCCTCTCCTGGCCTCCATGGGCACTCGCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CCA 90 bp | CTCCGAGGCAGAAGGACCTCCTATCTAGCAGGCTGGTTGAAGAGCTaGTCCCTTGCTTCCTGTCCTCTCCTAAGACCACTGCTGTATAGA | + |
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Preference number: 1 (lower is better) Translates to: LRGRRTSYLAGWLKS*SLASCPLLRPLLYR Trigger: TCTATACAGCAGTGGTCTTAGGAGAGGACAGGAAGCAAGGGACCAGCTCTTCAACCAGCCTGCTAGATAGGAGGTCCTTCTGCCTCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR TCA 90 bp | TGGTCCCTTGCTTCCTGTCCTCTCCTAAGACCACTGCTGTATAGATaGGCTTGCTTCACAAGCCCTCTTCTCAGCCAGAAGGGAGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: WSLASCPLLRPLLYR*ACFTSPLLSQKGED Trigger: GTCCTCTCCCTTCTGGCTGAGAAGAGGGCTTGTGAAGCAAGCTCATCTATACAGCAGTGGTCTTAGGAGAGGACAGGAAGCAAGGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CAA 90 bp | GGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCTAGCAGGCTGGTaGAAGAGCTGGTCCCTTGCTTCCTGTCCTCTCCTAAGACCACTG | + |
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Preference number: 2 (lower is better) Translates to: GEVLRGRRTSYLAGW*KSWSLASCPLLRPL Trigger: CAGTGGTCTTAGGAGAGGACAGGAAGCAAGGGACCAGCTCTTCAACCAGCCTGCTAGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CAA 90 bp | TGTGCATTGTGGGTGCGAGTGCCCATGGAGGCCAGGAGAGGGCGCTaGATCTGCTGGAACCAGAGTGATGGTTGTGACAGATTAACGTGT | + |
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Preference number: 2 (lower is better) Translates to: CALWVRVPMEARRGR*ICWNQSDGCDRLTC Trigger: ACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCCTCTCCTGGCCTCCATGGGCACTCGCACCCACAATGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CAA 90 bp | GCTGGAGGCCCTGCCTTGACTAGAAGTATCCCAAGTAGCAAAGCCTaGGTTCAGAGCATGGACGAGAGGCGCTGTTTCTTCCTCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: AGGPALTRSIPSSKA*VQSMDERRCFFLHS Trigger: ACTGTGGAGGAAGAAACAGCGCCTCTCGTCCATGCTCTGAACCAAGGCTTTGCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR-3UTR TCA 90 bp | AAACCAAAGACAACTGAGAGCACTTGGAGTGTGTATTTGAGTTCTTCAGGAGGCCAGTGGGAAAGGTCATaGGGGCAGGTGCATGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KPKTTESTWSVYLSSSGGQWERS*GQVHAL Trigger: CAGGGCATGCACCTGCCCTCATGACCTTTCCCACTG...GCCTCCTGAAGAACTCAAATACACACTCCAAGTGCTCTCAGTTGTCTTTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR-3UTR CCA 90 bp | GGGCGCTTGATCTGCTGGAACCAGAGTGATGGTTGTGACAGATTAACGTGTGTGTCCTATCTAGCAGGCTaGTTGAAGAGCTGGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GRLICWNQSDGCDRLTCVSYLAG*LKSWSL Trigger: AAGGGACCAGCTCTTCAACCAGCCTGCTAGATAGGA...CACACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR-3UTR GCA 90 bp | TTGACAGAAGAGAACATAACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGCCGCGGCTCATAATTTaGCAGTATGACAGTCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: LTEENITSKNGEVLRGRRPRLII*QYDSLA Trigger: AGCTAGACTGTCATACTGGCAAATTATGAGCCGCGG...CCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTTATGTTCTCTTCTGTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR TCA 72 bp | GGGTGCGAGTGCCCATGGAGGCCAGGAGAGGGCGCTTaGTCTGCTGGAACCAGAGTGATGGTTGTGACAGAT | + |
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Preference number: 3 (lower is better) Translates to: GCECPWRPGEGA*SAGTRVMVVTD Trigger: ATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCCTCTCCTGGCCTCCATGGGCACTCGCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CCA 72 bp | GTGCTCCGAGGCAGAAGGACCTCCTATCTAGCAGGCTaGTTGAAGAGCTGGTCCCTTGCTTCCTGTCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: VLRGRRTSYLAG*LKSWSLASCPL Trigger: GAGAGGACAGGAAGCAAGGGACCAGCTCTTCAACCAGCCTGCTAGATAGGAGGTCCTTCTGCCTCGGAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CCA 72 bp | GTGCCCATGGAGGCCAGGAGAGGGCGCTTGATCTGCTaGAACCAGAGTGATGGTTGTGACAGATTAACGTGT | + |
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Preference number: 3 (lower is better) Translates to: VPMEARRGRLIC*NQSDGCDRLTC Trigger: ACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCCTCTCCTGGCCTCCATGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CCA 72 bp | AGAAGGACCTCCTATCTAGCAGGCTGGTTGAAGAGCTaGTCCCTTGCTTCCTGTCCTCTCCTAAGACCACTG | + |
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Preference number: 3 (lower is better) Translates to: RRTSYLAGWLKS*SLASCPLLRPL Trigger: CAGTGGTCTTAGGAGAGGACAGGAAGCAAGGGACCAGCTCTTCAACCAGCCTGCTAGATAGGAGGTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR TCA 72 bp | CACGGGGTTCAGATATCAGAGCTGGAGGCCCTGCCTTaGCTAGAAGTATCCCAAGTAGCAAAGCCTTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: HGVQISELEALP*LEVSQVAKPWF Trigger: GAACCAAGGCTTTGCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACCCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR TCA 72 bp | TTCAGGAGGCTCCCCGCGGCTCATAATTTGCCAGTATaGCAGTCTAGCTCTGTGGCTTTTGTAAGAGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: FRRLPAAHNLPV*QSSSVAFVRGP Trigger: GGGACCTCTTACAAAAGCCACAGAGCTAGACTGTCATACTGGCAAATTATGAGCCGCGGGGAGCCTCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CCA 72 bp | GAAGTATCCCAAGTAGCAAAGCCTTGGTTCAGAGCATaGACGAGAGGCGCTGTTTCTTCCTCCACAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: EVSQVAKPWFRA*TRGAVSSSTVG Trigger: TCCCACTGTGGAGGAAGAAACAGCGCCTCTCGTCCATGCTCTGAACCAAGGCTTTGCTACTTGGGATACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR-3UTR CAA 90 bp | AACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCTAGCAGGACTTGGAGTGTGTATTaGAGTTCTTCAGGAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: NLQKWGGAPRQKDLLSSRTWSVY*SSSGGS Trigger: GGAGCCTCCTGAAGAACTCAAATACACACTCCAAGT...CCTGCTAGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR TCA 72 bp | GCTTCCTGTCCTCTCCTAAGACCACTGCTGTATAGATaGGCTTGCTTCACAAGCCCTCTTCTCAGCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ASCPLLRPLLYR*ACFTSPLLSQK Trigger: CTTCTGGCTGAGAAGAGGGCTTGTGAAGCAAGCTCATCTATACAGCAGTGGTCTTAGGAGAGGACAGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CCA 72 bp | CCAGACCTTGACAGAAGAGAACATAACCTCCAAAAATaGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCT | + |
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Preference number: 3 (lower is better) Translates to: PDLDRREHNLQK*GGAPRQKDLLS Trigger: AGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTTATGTTCTCTTCTGTCAAGGTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR TCA 72 bp | GTGGCAATAGGCCTCCAAAAGAAAACCAAAGACAACTaGGAGCACTTGGAGTGTGTATTTGAGTTCTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VAIGLQKKTKDN*EHLECVFEFFR Trigger: CCTGAAGAACTCAAATACACACTCCAAGTGCTCTCAGTTGTCTTTGGTTTTCTTTTGGAGGCCTATTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR TCA 90 bp | TCTCAGCCAGAAGGGAGAGGACAGATCAGGTACTGGAGGTCACAGGTGTGGCAATCAGGCTCAGCCAGTTaGTGCCCCCGCGGTGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SQPEGRGQIRYWRSQVWQSGSAS*CPRGGP Trigger: CGGACCACCGCGGGGGCATCAACTGGCTGAGCCTGA...TTGCCACACCTGTGACCTCCAGTACCTGATCTGTCCTCTCCCTTCTGGCTGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | GGTTCAGATATCAGAGCTGGAGGCCCTGCCTTGACTAGAAGTATCCCAAGTAGCCCCGTCAGCAGGCGCTaGCCGTCGGGGCTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GSDIRAGGPALTRSIPSSPVSRR*PSGLRL Trigger: GAGCCTGAGCCCCGACGGGCAGCGCCTGCTGACGGG...GCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | GGTTCAGATATCAGAGCTGGAGGCCCTGCCTTGACTAGAAGTATCCCAAGTAGCCTGTGCCGTCCTCGCTaGCCGTCAGCAGGCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GSDIRAGGPALTRSIPSSLCRPR*PSAGAA Trigger: GGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACAG...GCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | CAGTGCACGCATGCTCTTAACTACAAAGCCATCTCTCCTGCCCTGTGGCTCCTAAGGAGCGCGCAGCACTaGCCGTCCACGGTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QCTHALNYKAISPALWLLRSAQH*PSTVLQ Trigger: CTGGAGCACCGTGGACGGCCAGTGCTGCGCGCTCCT...TAGGAGCCACAGGGCAGGAGAGATGGCTTTGTAGTTAAGAGCATGCGTGCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CAA 72 bp | TGGGTGCGAGTGCCCATGGAGGCCAGGAGAGGGCGCTaGATCTGCTGGAACCAGAGTGATGGTTGTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: WVRVPMEARRGR*ICWNQSDGCDR Trigger: TCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCCTCTCCTGGCCTCCATGGGCACTCGCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | TCTCAGCCAGAAGGGAGAGGACAGATCAGGTACTGGAGGTCACAGGTGTGGCAAGGAGCCCACCACCCATaGCTGCCTCCATGCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SQPEGRGQIRYWRSQVWQGAHHP*LPPCRD Trigger: ATCCCTGCATGGAGGCAGCCATGGGTGGTGGGCTCC...TTGCCACACCTGTGACCTCCAGTACCTGATCTGTCCTCTCCCTTCTGGCTGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | CAGTGCACGCATGCTCTTAACTACAAAGCCATCTCTCCTGCCCTGTGGCTCCTATGCAGCACTCCTGACTaGGCATCAAAGGCCCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: QCTHALNYKAISPALWLLCSTPD*ASKARA Trigger: CGCCCGGGCCTTTGATGCCCAGTCAGGAGTGCTGCA...TAGGAGCCACAGGGCAGGAGAGATGGCTTTGTAGTTAAGAGCATGCGTGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | ACTGGAGGTCACAGGTGTGGCAATAGGCCTCCAAAAGAAAACCAAAGACAACTGACTGGCCGTCCACGGTaGTCCAGAGGCGGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: TGGHRCGNRPPKENQRQLTGRPR*SRGGLC Trigger: GCACAGCCCGCCTCTGGAGCACCGTGGACGGCCAGT...CAGTTGTCTTTGGTTTTCTTTTGGAGGCCTATTGCCACACCTGTGACCTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | GCAGCACGGGGTTCAGATATCAGAGCTGGAGGCCCTGCCTTGACTAGAAGTATCTGTCCTCTGTACACCTaGAGACACTGCCCCGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AARGSDIRAGGPALTRSICPLYT*RHCPVL Trigger: GAGGACGGGGCAGTGTCTGCAGGTGTACAGAGGACA...GATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACCCCGTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | CTAGAAGTATCCCAAGTAGCAAAGCCTTGGTTCAGAGCATGGACGAGAGGCGCTTTGATGCCCCCGCGGTaGTCCGCACAGACCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LEVSQVAKPWFRAWTRGALMPPR*SAQTLR Trigger: TCTGAGGGTCTGTGCGGACCACCGCGGGGGCATCAA...AGCGCCTCTCGTCCATGCTCTGAACCAAGGCTTTGCTACTTGGGATACTTCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | GGTTCAGATATCAGAGCTGGAGGCCCTGCCTTGACTAGAAGTATCCCAAGTAGCCCCCGAAGAGTCTGGTaGCAGCAGCCACTGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: GSDIRAGGPALTRSIPSSPRRVW*QQPLAT Trigger: GGTAGCCAGTGGCTGCTGCCACCAGACTCTTCGGGG...GCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | GGGCGCTTGATCTGCTGGAACCAGAGTGATGGTTGTGACAGATTAACGTGTGTGGGTGGCAGCAGCCACTaGCTACCTGCCACACTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRLICWNQSDGCDRLTCVGGSSH*LPATLW Trigger: CCAAAGTGTGGCAGGTAGCCAGTGGCTGCTGCCACC...CACACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | TTGACAGAAGAGAACATAACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGTGGCCCCGAAGAGTCTaGTGGCAGCAGCCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTEENITSKNGEVLRGRRWPRRV*WQQPLA Trigger: AGCCAGTGGCTGCTGCCACCAGACTCTTCGGGGCCA...CCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTTATGTTCTCTTCTGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | GGTTCAGATATCAGAGCTGGAGGCCCTGCCTTGACTAGAAGTATCCCAAGTAGCAGCACTGCACCTGTGTaGCCCCGAAGAGTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSDIRAGGPALTRSIPSSSTAPV*PRRVWW Trigger: CCACCAGACTCTTCGGGGCCACACAGGTGCAGTGCT...GCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | CAGGTACTGGAGGTCACAGGTGTGGCAATAGGCCTCCAAAAGAAAACCAAAGACGTGAGAGGCTACGCTTaGCTGCTGGCCTGCGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QVLEVTGVAIGLQKKTKDVRGYA*LLACVA Trigger: TGCCACGCAGGCCAGCAGCCAAGCGTAGCCTCTCAC...GTCTTTGGTTTTCTTTTGGAGGCCTATTGCCACACCTGTGACCTCCAGTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR TCA 90 bp | CAGGTACTGGAGGTCACAGGTGTGGCAATAGGCCTCCAAAAGAAAACCAAAGACTGCCTGCGTGGTACTTaGGGGCACTCACGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: QVLEVTGVAIGLQKKTKDCLRGT*GHSRCV Trigger: GACACAGCGTGAGTGCCCTCAAGTACCACGCAGGCA...GTCTTTGGTTTTCTTTTGGAGGCCTATTGCCACACCTGTGACCTCCAGTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR TCA 90 bp | AGTGTGTATTTGAGTTCTTCAGGAGGCTCCCCGCGGCTCATAATTTGCCAGTATCCTCTGCAGCACTCCTaGCTGGGCATCAAAGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SVYLSSSGGSPRLIICQYPLQHS*LGIKGP Trigger: CGGGCCTTTGATGCCCAGTCAGGAGTGCTGCAGAGG...ATACTGGCAAATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAAATACACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | AGCACTTGGAGTGTGTATTTGAGTTCTTCAGGAGGCTCCCCGCGGCTCATAATTCCCACCACCCATGGCTaGCTCCATGCAGGGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: STWSVYLSSSGGSPRLIIPTTHG*LHAGIL Trigger: CAAGATCCCTGCATGGAGGCAGCCATGGGTGGTGGG...AATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAAATACACACTCCAAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | GGTTCAGATATCAGAGCTGGAGGCCCTGCCTTGACTAGAAGTATCCCAAGTAGCGTGTGGCTGGACACATaGAGCACCAGGCACAGCACT | + |
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Preference number: 4 (lower is better) Translates to: GSDIRAGGPALTRSIPSSVWLDT*STRHST Trigger: AGTGCTGTGCCTGGTGCTGCATGTGTCCAGCCACAC...GCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | ATAACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCTAGCACGGAAAACTCGCAGCTaGTCCCCACTCAGGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: ITSKNGEVLRGRRTSYLARKTRS*SPLRMS Trigger: GGACATCCTGAGTGGGGAGCAGCTGCGAGTTTTCCG...TGCTAGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | AACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCTAGCAGGTGTGAACAAGGTGCCTaGGTGGTACTTGAGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: NLQKWGGAPRQKDLLSSRCEQGA*VVLEGT Trigger: AGTGCCCTCAAGTACCACGCAGGCACCTTGTTCACA...CCTGCTAGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | GGTTCAGATATCAGAGCTGGAGGCCCTGCCTTGACTAGAAGTATCCCAAGTAGCTGGCCCCGGAACTCTTaGGACACTTGCCCTTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GSDIRAGGPALTRSIPSSWPRNS*DTCPLS Trigger: GGACAAAGGGCAAGTGTCCCAAGAGTTCCGGGGCCA...GCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | CAGTGCACGCATGCTCTTAACTACAAAGCCATCTCTCCTGCCCTGTGGCTCCTAAACAAGGTGCCTGCGTaGTACTTGAGGGCACTCACG | + |
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Preference number: 4 (lower is better) Translates to: QCTHALNYKAISPALWLLNKVPA*YLRALT Trigger: CGTGAGTGCCCTCAAGTACCACGCAGGCACCTTGTT...TAGGAGCCACAGGGCAGGAGAGATGGCTTTGTAGTTAAGAGCATGCGTGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR TCA 90 bp | TTGACAGAAGAGAACATAACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGCATCAGTGCTGCCTGTaGAGGCTGTGTGGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: LTEENITSKNGEVLRGRRHQCCL*RLCGWT Trigger: TGTCCAGCCACACAGCCTTCACAGGCAGCACTGATG...CCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTTATGTTCTCTTCTGTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | ACTGGAGGTCACAGGTGTGGCAATAGGCCTCCAAAAGAAAACCAAAGACAACTGTCCATGCAGGGATCTTaGGGCAGGTCCTCGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TGGHRCGNRPPKENQRQLSMQGS*GRSSGA Trigger: TGCTCCCGAGGACCTGCCCCAAGATCCCTGCATGGA...CAGTTGTCTTTGGTTTTCTTTTGGAGGCCTATTGCCACACCTGTGACCTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | AGCACTTGGAGTGTGTATTTGAGTTCTTCAGGAGGCTCCCCGCGGCTCATAATTCAGATGACAGAGCCCTaGTGCTCCCGGAAAACTCGC | + |
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Preference number: 4 (lower is better) Translates to: STWSVYLSSSGGSPRLIIQMTEP*CSRKTR Trigger: GCGAGTTTTCCGGGAGCACCAGGGCTCTGTCATCTG...AATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAAATACACACTCCAAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | CAGTGCACGCATGCTCTTAACTACAAAGCCATCTCTCCTGCCCTGTGGCTCCTATTGATGACAAAGGTGTaGCCTCGGAACACCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QCTHALNYKAISPALWLLLMTKV*PRNTLC Trigger: GCAGAGGGTGTTCCGAGGCCACACCTTTGTCATCAA...TAGGAGCCACAGGGCAGGAGAGATGGCTTTGTAGTTAAGAGCATGCGTGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CAA 72 bp | GCACGGGGTTCAGATATCAGAGCTGGAGGCCCTGCCTaGACTAGAAGTATCCCAAGTAGCAAAGCCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARGSDIRAGGPA*TRSIPSSKALV Trigger: AACCAAGGCTTTGCTACTTGGGATACTTCTAGTCAAGGCAGGGCCTCCAGCTCTGATATCTGAACCCCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR TCA 90 bp | AGTGTGTATTTGAGTTCTTCAGGAGGCTCCCCGCGGCTCATAATTTGCCAGTATCAGCTAGCCAGCACTTaGCAGTTCTGTCCGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVYLSSSGGSPRLIICQYQLAST*QFCPHC Trigger: GCAGTGCGGACAGAACTGTCAAGTGCTGGCTAGCTG...ATACTGGCAAATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAAATACACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | ACTGGAGGTCACAGGTGTGGCAATAGGCCTCCAAAAGAAAACCAAAGACAACTGTACACCTGCAGACACTaGCCCGTCCTCACATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGGHRCGNRPPKENQRQLYTCRH*PVLTSH Trigger: GTGGGATGTGAGGACGGGGCAGTGTCTGCAGGTGTA...CAGTTGTCTTTGGTTTTCTTTTGGAGGCCTATTGCCACACCTGTGACCTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | TTGACTAGAAGTATCCCAAGTAGCAAAGCCTTGGTTCAGAGCATGGACGAGAGGCATCCCACCTCCGGATaGTGCAGTCAGCACTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRSIPSSKALVQSMDERHPTSG*CSQHYR Trigger: CCTGTAGTGCTGACTGCACCATCCGGAGGTGGGATG...CCTCTCGTCCATGCTCTGAACCAAGGCTTTGCTACTTGGGATACTTCTAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | AGAGGGCGCTTGATCTGCTGGAACCAGAGTGATGGTTGTGACAGATTAACGTGTGCTGTGTCTATGTGCTaGAAAGGTGAGCACCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRLICWNQSDGCDRLTCAVSMC*KGEHPL Trigger: GAGAGGGTGCTCACCTTTCCAGCACATAGACACAGC...ACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CAA 72 bp | CCTGCCTTGACTAGAAGTATCCCAAGTAGCAAAGCCTaGGTTCAGAGCATGGACGAGAGGCGCTGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PALTRSIPSSKA*VQSMDERRCFF Trigger: GAAGAAACAGCGCCTCTCGTCCATGCTCTGAACCAAGGCTTTGCTACTTGGGATACTTCTAGTCAAGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR TCA 90 bp | ACTGGAGGTCACAGGTGTGGCAATAGGCCTCCAAAAGAAAACCAAAGACAACTGAGTCAGCACTACAGGTaGAGGCAGCTTCATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGGHRCGNRPPKENQRQLSQHYR*RQLHPP Trigger: TGGAGGATGAAGCTGCCTTCACCTGTAGTGCTGACT...CAGTTGTCTTTGGTTTTCTTTTGGAGGCCTATTGCCACACCTGTGACCTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR TCA 90 bp | ATAACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCTAGCAGATCATAGGAACTGCTaGAGAGCTGGTCATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITSKNGEVLRGRRTSYLADHRNC*RAGHWQ Trigger: TTGCCAATGACCAGCTCTTCAGCAGTTCCTATGATC...TGCTAGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR GCA 90 bp | AGTGTGTATTTGAGTTCTTCAGGAGGCTCCCCGCGGCTCATAATTTGCCAGTATCACGCTGTGTCTATGTaGTGGAAAGGTGAGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVYLSSSGGSPRLIICQYHAVSM*WKGEHP Trigger: AGGGTGCTCACCTTTCCAGCACATAGACACAGCGTG...ATACTGGCAAATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAAATACACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | CTAGAAGTATCCCAAGTAGCAAAGCCTTGGTTCAGAGCATGGACGAGAGGCGCTGAACTGCTGAAGAGCTaGTCATTGGCAACTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LEVSQVAKPWFRAWTRGAELLKS*SLATRI Trigger: GATCCTAGTTGCCAATGACCAGCTCTTCAGCAGTTC...AGCGCCTCTCGTCCATGCTCTGAACCAAGGCTTTGCTACTTGGGATACTTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCAGACCTTGACAGAAGAGAACATAACCTCCAAAAATGGGGAGGTGCTAGTACACAGTTACGGTaGCCCCGGAACTCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPDLDRREHNLQKWGGASTQLR*PRNSWD Trigger: GTCCCAAGAGTTCCGGGGCCACCGTAACTGTGTACT...AGCACCTCCCCATTTTTGGAGGTTATGTTCTCTTCTGTCAAGGTCTGGACTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CCA 90 bp | AAACCAAAGACAACTGAGAGCACTTGGAGTGTGTATTTGAGTTCTTCAGGAGGCCCTGTGAAGGCTGTGTaGCTGGACACATGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KPKTTESTWSVYLSSSGGPVKAV*LDTCST Trigger: GGTGCTGCATGTGTCCAGCCACACAGCCTTCACAGG...GCCTCCTGAAGAACTCAAATACACACTCCAAGTGCTCTCAGTTGTCTTTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| 3UTR CAA 72 bp | AAACCAAAGACAACTGAGAGCACTTGGAGTGTGTATTaGAGTTCTTCAGGAGGCTCCCCGCGGCTCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: KPKTTESTWSVY*SSSGGSPRLII Trigger: AATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAAATACACACTCCAAGTGCTCTCAGTTGTCTTTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | GGAGCGCGCAGCACTGGCCGTCCACGGTGCTCCAGAGGCGGGCTGTaGCGTCCTCGCTGCCCGTCAGCAGGCGCTGCCCGTCGGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GARSTGRPRCSRGGL*RPRCPSAGAARRGS Trigger: TGAGCCCCGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACAGCCCGCCTCTGGAGCACCGTGGACGGCCAGTGCTGCGCGCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | CTCCAGAGGCGGGCTGTGCCGTCCTCGCTGCCCGTCAGCAGGCGCTaGCCGTCGGGGCTCAGGCTCAGCCAGTTGATGCCCCCGCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQRRAVPSSLPVSRR*PSGLRLSQLMPPRW Trigger: CCACCGCGGGGGCATCAACTGGCTGAGCCTGAGCCCCGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACAGCCCGCCTCTGGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS TCA 90 bp | TGCCCGTCAGCAGGCGCTGCCCGTCGGGGCTCAGGCTCAGCCAGTTaGTGCCCCCGCGGTGGTCCGCACAGACCCTCAGAGCCGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CPSAGAARRGSGSAS*CPRGGPHRPSEPTR Trigger: GCGGGTCGGCTCTGAGGGTCTGTGCGGACCACCGCGGGGGCATCAACTGGCTGAGCCTGAGCCCCGACGGGCAGCGCCTGCTGACGGGCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | ACTGGCCGTCCACGGTGCTCCAGAGGCGGGCTGTGCCGTCCTCGCTaGCCGTCAGCAGGCGCTGCCCGTCGGGGCTCAGGCTCAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGRPRCSRGGLCRPR*PSAGAARRGSGSAS Trigger: ACTGGCTGAGCCTGAGCCCCGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACAGCCCGCCTCTGGAGCACCGTGGACGGCCAGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | AGCTCTCATGTCCTTGAAGGAGCGCGCAGCACTGGCCGTCCACGGTaGTCCAGAGGCGGGCTGTGCCGTCCTCGCTGCCCGTCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSHVLEGARSTGRPR*SRGGLCRPRCPSAG Trigger: GCCTGCTGACGGGCAGCGAGGACGGCACAGCCCGCCTCTGGAGCACCGTGGACGGCCAGTGCTGCGCGCTCCTTCAAGGACATGAGAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS TCA 90 bp | GTTGATGACAAAGGTGTGGCCTCGGAACACCCTCTGCAGCACTCCTaGCTGGGCATCAAAGGCCCGGGCGCAGGCATCCCCACTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VDDKGVASEHPLQHS*LGIKGPGAGIPTAC Trigger: ACAGGCAGTGGGGATGCCTGCGCCCGGGCCTTTGATGCCCAGTCAGGAGTGCTGCAGAGGGTGTTCCGAGGCCACACCTTTGTCATCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068693.12 ENSMUST00000127320.2 |
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| CDS CCA 90 bp | TGCAGCACCAGGCACAGCACTGCACCTGTGTGGCCCCGAAGAGTCTaGTGGCAGCAGCCACTGGCTACCTGCCACACTTTGGCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSTRHSTAPVWPRRV*WQQPLATCHTLAVS Trigger: TGACACAGCCAAAGTGTGGCAGGTAGCCAGTGGCTGCTGCCACCAGACTCTTCGGGGCCACACAGGTGCAGTGCTGTGCCTGGTGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 90 bp | ATGACAAAGGTGTGGCCTCGGAACACCCTCTGCAGCACTCCTGACTaGGCATCAAAGGCCCGGGCGCAGGCATCCCCACTGCCTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MTKVWPRNTLCSTPD*ASKARAQASPLPVN Trigger: GTTCACAGGCAGTGGGGATGCCTGCGCCCGGGCCTTTGATGCCCAGTCAGGAGTGCTGCAGAGGGTGTTCCGAGGCCACACCTTTGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068693.12 ENSMUST00000127320.2 |
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| CDS GCA 90 bp | CCTGTGTGGCCCCGAAGAGTCTGGTGGCAGCAGCCACTGGCTACCTaGCACACTTTGGCTGTGTCATCTGAGCTGCCAGTCACTAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVWPRRVWWQQPLAT*HTLAVSSELPVTRS Trigger: GCTCCTAGTGACTGGCAGCTCAGATGACACAGCCAAAGTGTGGCAGGTAGCCAGTGGCTGCTGCCACCAGACTCTTCGGGGCCACACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 90 bp | AGCACCAGGCACAGCACTGCACCTGTGTGGCCCCGAAGAGTCTGGTaGCAGCAGCCACTGGCTACCTGCCACACTTTGGCTGTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: STRHSTAPVWPRRVW*QQPLATCHTLAVSS Trigger: AGATGACACAGCCAAAGTGTGGCAGGTAGCCAGTGGCTGCTGCCACCAGACTCTTCGGGGCCACACAGGTGCAGTGCTGTGCCTGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CAA 90 bp | TCTCAGCCAGAAGGGAGAGGACAGATCAGGTACTGGAGGTCACAGGTGTGGCAACTCAGGCTCAGCCAGTaGATGCCCCCGCGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQPEGRGQIRYWRSQVWQLRLSQ*MPPRWS Trigger: GGACCACCGCGGGGGCATCAACTGGCTGAGCCTGAG...TTGCCACACCTGTGACCTCCAGTACCTGATCTGTCCTCTCCCTTCTGGCTGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | TCCAAACAGATGACAGAGCCCTGGTGCTCCCGGAAAACTCGCAGCTaGTCCCCACTCAGGATGTCCCAAGCGCGAACGGTGGCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SKQMTEPWCSRKTRS*SPLRMSQARTVASV Trigger: CACTGATGCCACCGTTCGCGCTTGGGACATCCTGAGTGGGGAGCAGCTGCGAGTTTTCCGGGAGCACCAGGGCTCTGTCATCTGTTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 90 bp | GAGTACAGGAGCCGATCTGTGAGCTCCAAACAGATGACAGAGCCCTaGTGCTCCCGGAAAACTCGCAGCTGCTCCCCACTCAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EYRSRSVSSKQMTEP*CSRKTRSCSPLRMS Trigger: GGACATCCTGAGTGGGGAGCAGCTGCGAGTTTTCCGGGAGCACCAGGGCTCTGTCATCTGTTTGGAGCTCACAGATCGGCTCCTGTACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS TCA 90 bp | CCGTCCTCACATCCCACCTCCGGATGGTGCAGTCAGCACTACAGGTaGAGGCAGCTTCATCCTCCAGGTGACAGAAGGTCACATAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSHPTSGWCSQHYR*RQLHPPGDRRSHSS Trigger: AGAGCTATGTGACCTTCTGTCACCTGGAGGATGAAGCTGCCTTCACCTGTAGTGCTGACTGCACCATCCGGAGGTGGGATGTGAGGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | GCAACTAGGATCCTGTTCACAATGGATGTGTGTCCTCTGTACACCTaGAGACACTGCCCCGTCCTCACATCCCACCTCCGGATGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATRILFTMDVCPLYT*RHCPVLTSHLRMVQ Trigger: CTGCACCATCCGGAGGTGGGATGTGAGGACGGGGCAGTGTCTGCAGGTGTACAGAGGACACACATCCATTGTGAACAGGATCCTAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | ATCCTGTTCACAATGGATGTGTGTCCTCTGTACACCTGCAGACACTaGCCCGTCCTCACATCCCACCTCCGGATGGTGCAGTCAGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: ILFTMDVCPLYTCRH*PVLTSHLRMVQSAL Trigger: TAGTGCTGACTGCACCATCCGGAGGTGGGATGTGAGGACGGGGCAGTGTCTGCAGGTGTACAGAGGACACACATCCATTGTGAACAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 90 bp | ATGGGCTGGGGGCATCATTTTCTGAGCTTGGTCCTGAGAGGTGCCTaGGTGGTACTTGAGGGCACTCACGCTGTGTCTATGTGCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MGWGHHFLSLVLRGA*VVLEGTHAVSMCWK Trigger: TTTCCAGCACATAGACACAGCGTGAGTGCCCTCAAGTACCACGCAGGCACCTCTCAGGACCAAGCTCAGAAAATGATGCCCCCAGCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127320.2 |
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| CDS-3UTR CAA 90 bp | AACCTCCAAAAATGGGGAGGTGCTCCGAGGCAGAAGGACCTCCTATCTAGCAGGTGGGACACTTGCCCTTaGTCCACAGTCCACACACGA | + |
|
Preference number: 5 (lower is better) Translates to: NLQKWGGAPRQKDLLSSRWDTCP*STVHTR Trigger: TCGTGTGTGGACTGTGGACAAAGGGCAAGTGTCCCA...CCTGCTAGATAGGAGGTCCTTCTGCCTCGGAGCACCTCCCCATTTTTGGAGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CAA 90 bp | GGGCGCTTGATCTGCTGGAACCAGAGTGATGGTTGTGACAGATTAACGTGTGTGATAGCTCTCATGTCCTaGAAGGAGCGCGCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GRLICWNQSDGCDRLTCVIALMS*KERAAL Trigger: CAGTGCTGCGCGCTCCTTCAAGGACATGAGAGCTAT...CACACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CAA 90 bp | ACTGGAGGTCACAGGTGTGGCAATAGGCCTCCAAAAGAAAACCAAAGACAACTGGTGGCCCCGGAACTCTaGGGACACTTGCCCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGGHRCGNRPPKENQRQLVAPEL*GHLPFV Trigger: GACAAAGGGCAAGTGTCCCAAGAGTTCCGGGGCCAC...CAGTTGTCTTTGGTTTTCTTTTGGAGGCCTATTGCCACACCTGTGACCTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CAA 90 bp | AGAGGGCGCTTGATCTGCTGGAACCAGAGTGATGGTTGTGACAGATTAACGTGTTGCACCTGGAGACAGTaGATGACAAAGGTGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRLICWNQSDGCDRLTCCTWRQ*MTKVWP Trigger: AGGCCACACCTTTGTCATCAACTGTCTCCAGGTGCA...ACACGTTAATCTGTCACAACCATCACTCTGGTTCCAGCAGATCAAGCGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS TCA 90 bp | CTTTGTCCACAGTCCACACACGAGCTGTCCGATCATAGGAACTGCTaGAGAGCTGGTCATTGGCAACTAGGATCCTGTTCACAATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCPQSTHELSDHRNC*RAGHWQLGSCSQWM Trigger: CATCCATTGTGAACAGGATCCTAGTTGCCAATGACCAGCTCTTCAGCAGTTCCTATGATCGGACAGCTCGTGTGTGGACTGTGGACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS-3UTR CAA 90 bp | AGCACTTGGAGTGTGTATTTGAGTTCTTCAGGAGGCTCCCCGCGGCTCATAATTCTGAAGAGCTGGTCATaGGCAACTAGGATCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STWSVYLSSSGGSPRLIILKSWS*ATRILF Trigger: GAACAGGATCCTAGTTGCCAATGACCAGCTCTTCAG...AATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAAATACACACTCCAAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | CCACGGTGCTCCAGAGGCGGGCTGTGCCGTCCTCGCTaGCCGTCAGCAGGCGCTGCCCGTCGGGGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRCSRGGLCRPR*PSAGAARRGSG Trigger: GCCTGAGCCCCGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACAGCCCGCCTCTGGAGCACCGTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | CGGGCTGTGCCGTCCTCGCTGCCCGTCAGCAGGCGCTaGCCGTCGGGGCTCAGGCTCAGCCAGTTGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RAVPSSLPVSRR*PSGLRLSQLMP Trigger: GGGCATCAACTGGCTGAGCCTGAGCCCCGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACAGCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | AGCACTGGCCGTCCACGGTGCTCCAGAGGCGGGCTGTaGCGTCCTCGCTGCCCGTCAGCAGGCGCTGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: STGRPRCSRGGL*RPRCPSAGAAR Trigger: ACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACAGCCCGCCTCTGGAGCACCGTGGACGGCCAGTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 90 bp | CTGCCCGTCAGCAGGCGCTGCCCGTCGGGGCTCAGGCTCAGCCAGTaGATGCCCCCGCGGTGGTCCGCACAGACCCTCAGAGCCGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPVSRRCPSGLRLSQ*MPPRWSAQTLRADP Trigger: CGGGTCGGCTCTGAGGGTCTGTGCGGACCACCGCGGGGGCATCAACTGGCTGAGCCTGAGCCCCGACGGGCAGCGCCTGCTGACGGGCAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS TCA 72 bp | GCAGGCGCTGCCCGTCGGGGCTCAGGCTCAGCCAGTTaGTGCCCCCGCGGTGGTCCGCACAGACCCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGAARRGSGSAS*CPRGGPHRPSE Trigger: CTCTGAGGGTCTGTGCGGACCACCGCGGGGGCATCAACTGGCTGAGCCTGAGCCCCGACGGGCAGCGCCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | GTCCTTGAAGGAGCGCGCAGCACTGGCCGTCCACGGTaGTCCAGAGGCGGGCTGTGCCGTCCTCGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VLEGARSTGRPR*SRGGLCRPRCP Trigger: CGGGCAGCGAGGACGGCACAGCCCGCCTCTGGAGCACCGTGGACGGCCAGTGCTGCGCGCTCCTTCAAGGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 72 bp | TCGGGGCTCAGGCTCAGCCAGTTGATGCCCCCGCGGTaGTCCGCACAGACCCTCAGAGCCGACCCGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGLRLSQLMPPR*SAQTLRADPLL Trigger: GAGCAGCGGGTCGGCTCTGAGGGTCTGTGCGGACCACCGCGGGGGCATCAACTGGCTGAGCCTGAGCCCCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 72 bp | AGCAGGCGCTGCCCGTCGGGGCTCAGGCTCAGCCAGTaGATGCCCCCGCGGTGGTCCGCACAGACCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRRCPSGLRLSQ*MPPRWSAQTLR Trigger: TCTGAGGGTCTGTGCGGACCACCGCGGGGGCATCAACTGGCTGAGCCTGAGCCCCGACGGGCAGCGCCTGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 72 bp | GTGTGGCCTCGGAACACCCTCTGCAGCACTCCTGACTaGGCATCAAAGGCCCGGGCGCAGGCATCCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VWPRNTLCSTPD*ASKARAQASPL Trigger: CAGTGGGGATGCCTGCGCCCGGGCCTTTGATGCCCAGTCAGGAGTGCTGCAGAGGGTGTTCCGAGGCCACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068693.12 ENSMUST00000127320.2 |
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| CDS TCA 72 bp | AAAGGTGTGGCCTCGGAACACCCTCTGCAGCACTCCTaGCTGGGCATCAAAGGCCCGGGCGCAGGCATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KGVASEHPLQHS*LGIKGPGAGIP Trigger: GGGGATGCCTGCGCCCGGGCCTTTGATGCCCAGTCAGGAGTGCTGCAGAGGGTGTTCCGAGGCCACACCTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068693.12 ENSMUST00000127320.2 |
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| CDS CCA 72 bp | TTGGCTGCTGGCCTGCGTGGCAAAGGTGGCACCGACTaGAGACCACGTACGTCCCAGAGGCGCAGAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LAAGLRGKGGTD*RPRTSQRRRAP Trigger: TGGTGCTCTGCGCCTCTGGGACGTACGTGGTCTCCAGTCGGTGCCACCTTTGCCACGCAGGCCAGCAGCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068693.12 ENSMUST00000127320.2 |
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| CDS CAA 90 bp | GCTGCACAGGCCACCTTGTTGCTAAAGAGGCGTGAGAGGCTACGCTaGGCTGCTGGCCTGCGTGGCAAAGGTGGCACCGACTGGAGACCA | + |
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Preference number: 6 (lower is better) Translates to: AAQATLLLKRRERLR*AAGLRGKGGTDWRP Trigger: TGGTCTCCAGTCGGTGCCACCTTTGCCACGCAGGCCAGCAGCCAAGCGTAGCCTCTCACGCCTCTTTAGCAACAAGGTGGCCTGTGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS TCA 72 bp | TGGGGCTGCACAGGCCACCTTGTTGCTAAAGAGGCGTaGGAGGCTACGCTTGGCTGCTGGCCTGCGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: WGCTGHLVAKEA*EATLGCWPAWQ Trigger: TTGCCACGCAGGCCAGCAGCCAAGCGTAGCCTCTCACGCCTCTTTAGCAACAAGGTGGCCTGTGCAGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | ATGACAGAGCCCTGGTGCTCCCGGAAAACTCGCAGCTaGTCCCCACTCAGGATGTCCCAAGCGCGAACGGTG | + |
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Preference number: 6 (lower is better) Translates to: MTEPWCSRKTRS*SPLRMSQARTV Trigger: CACCGTTCGCGCTTGGGACATCCTGAGTGGGGAGCAGCTGCGAGTTTTCCGGGAGCACCAGGGCTCTGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 72 bp | CATCTGAGCTGCCAGTCACTAGGAGCCCACCACCCATaGCTGCCTCCATGCAGGGATCTTGGGGCAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLSCQSLGAHHP*LPPCRDLGAGP Trigger: AGGACCTGCCCCAAGATCCCTGCATGGAGGCAGCCATGGGTGGTGGGCTCCTAGTGACTGGCAGCTCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 72 bp | GCCACCTTGTTGCTAAAGAGGCGTGAGAGGCTACGCTaGGCTGCTGGCCTGCGTGGCAAAGGTGGCACCGAC | + |
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Preference number: 6 (lower is better) Translates to: ATLLLKRRERLR*AAGLRGKGGTD Trigger: GTCGGTGCCACCTTTGCCACGCAGGCCAGCAGCCAAGCGTAGCCTCTCACGCCTCTTTAGCAACAAGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 72 bp | GCTGGCTGTAGGGGCACTGGGGCTGCACAGGCCACCTaGTTGCTAAAGAGGCGTGAGAGGCTACGCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGCRGTGAAQAT*LLKRRERLRLA Trigger: AGCCAAGCGTAGCCTCTCACGCCTCTTTAGCAACAAGGTGGCCTGTGCAGCCCCAGTGCCCCTACAGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | CAGTTGATGACAAAGGTGTGGCCTCGGAACACCCTCTaGAGCACTCCTGACTGGGCATCAAAGGCCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: QLMTKVWPRNTL*STPDWASKARA Trigger: CGCCCGGGCCTTTGATGCCCAGTCAGGAGTGCTGCAGAGGGTGTTCCGAGGCCACACCTTTGTCATCAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068693.12 ENSMUST00000127320.2 |
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| CDS CAA 90 bp | GCGCAGGCATCCCCACTGCCTGTGAACAAGGTGCCTGCGTGGTACTaGAGGGCACTCACGCTGTGTCTATGTGCTGGAAAGGTGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: AQASPLPVNKVPAWY*RALTLCLCAGKVST Trigger: GGTGCTCACCTTTCCAGCACATAGACACAGCGTGAGTGCCCTCAAGTACCACGCAGGCACCTTGTTCACAGGCAGTGGGGATGCCTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 72 bp | AGCCGATCTGTGAGCTCCAAACAGATGACAGAGCCCTaGTGCTCCCGGAAAACTCGCAGCTGCTCCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: SRSVSSKQMTEP*CSRKTRSCSPL Trigger: GAGTGGGGAGCAGCTGCGAGTTTTCCGGGAGCACCAGGGCTCTGTCATCTGTTTGGAGCTCACAGATCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 72 bp | GTGAGCACCCTCTCCCCAGTATCAGCTAGCCAGCACTaGACAGTTCTGTCCGCACTGCCCGAGTACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VSTLSPVSASQH*TVLSALPEYRS Trigger: GCTCCTGTACTCGGGCAGTGCGGACAGAACTGTCAAGTGCTGGCTAGCTGATACTGGGGAGAGGGTGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | ACAATGGATGTGTGTCCTCTGTACACCTGCAGACACTaGCCCGTCCTCACATCCCACCTCCGGATGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: TMDVCPLYTCRH*PVLTSHLRMVQ Trigger: CTGCACCATCCGGAGGTGGGATGTGAGGACGGGGCAGTGTCTGCAGGTGTACAGAGGACACACATCCATTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | ACACAGTTACGGTGGCCCCGGAACTCTTGGGACACTTaGCCTTTGTCCACAGTCCACACACGAGCTGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: TQLRWPRNSWDT*PLSTVHTRAVR Trigger: TCGGACAGCTCGTGTGTGGACTGTGGACAAAGGGCAAGTGTCCCAAGAGTTCCGGGGCCACCGTAACTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 72 bp | CAGGCATCCCCACTGCCTGTGAACAAGGTGCCTGCGTaGTACTTGAGGGCACTCACGCTGTGTCTATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QASPLPVNKVPA*YLRALTLCLCA Trigger: AGCACATAGACACAGCGTGAGTGCCCTCAAGTACCACGCAGGCACCTTGTTCACAGGCAGTGGGGATGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 72 bp | TACACAGTTACGGTGGCCCCGGAACTCTTGGGACACTaGCCCTTTGTCCACAGTCCACACACGAGCTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: YTVTVAPELLGH*PFVHSPHTSCP Trigger: CGGACAGCTCGTGTGTGGACTGTGGACAAAGGGCAAGTGTCCCAAGAGTTCCGGGGCCACCGTAACTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 90 bp | ATGCAGGAGCACCATTTCATGGGCTGGGGGCATCATTTTCTGAGCTaGGTCCTGAGAGGTGCCTGCGTGGTACTTGAGGGCACTCACGCT | + |
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Preference number: 6 (lower is better) Translates to: MQEHHFMGWGHHFLS*VLRGACVVLEGTHA Trigger: AGCGTGAGTGCCCTCAAGTACCACGCAGGCACCTCTCAGGACCAAGCTCAGAAAATGATGCCCCCAGCCCATGAAATGGTGCTCCTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127320.2 |
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| CDS TCA 72 bp | CATCCCACCTCCGGATGGTGCAGTCAGCACTACAGGTaGAGGCAGCTTCATCCTCCAGGTGACAGAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: HPTSGWCSQHYR*RQLHPPGDRRS Trigger: TGACCTTCTGTCACCTGGAGGATGAAGCTGCCTTCACCTGTAGTGCTGACTGCACCATCCGGAGGTGGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS TCA 72 bp | TCTGAGCTTGGTCCTGAGAGGTGCCTGCGTGGTACTTaGGGGCACTCACGCTGTGTCTATGTGCTGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SELGPERCLRGT*GHSRCVYVLER Trigger: CCTTTCCAGCACATAGACACAGCGTGAGTGCCCTCAAGTACCACGCAGGCACCTCTCAGGACCAAGCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127320.2 |
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| CDS GCA 72 bp | ATCCTGTTCACAATGGATGTGTGTCCTCTGTACACCTaGAGACACTGCCCCGTCCTCACATCCCACCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: ILFTMDVCPLYT*RHCPVLTSHLR Trigger: CCGGAGGTGGGATGTGAGGACGGGGCAGTGTCTGCAGGTGTACAGAGGACACACATCCATTGTGAACAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS GCA 72 bp | TGCGTGGTACTTGAGGGCACTCACGCTGTGTCTATGTaGTGGAAAGGTGAGCACCCTCTCCCCAGTATCAGC | + |
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Preference number: 6 (lower is better) Translates to: CVVLEGTHAVSM*WKGEHPLPSIS Trigger: GCTGATACTGGGGAGAGGGTGCTCACCTTTCCAGCACATAGACACAGCGTGAGTGCCCTCAAGTACCACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CAA 72 bp | CACCATTTCATGGGCTGGGGGCATCATTTTCTGAGCTaGGTCCTGAGAGGTGCCTGCGTGGTACTTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: HHFMGWGHHFLS*VLRGACVVLEG Trigger: GCCCTCAAGTACCACGCAGGCACCTCTCAGGACCAAGCTCAGAAAATGATGCCCCCAGCCCATGAAATGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127320.2 |
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| CDS GCA 72 bp | GGGCATCATTTTCTGAGCTTGGTCCTGAGAGGTGCCTaGGTGGTACTTGAGGGCACTCACGCTGTGTCTATG | + |
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Preference number: 6 (lower is better) Translates to: GHHFLSLVLRGA*VVLEGTHAVSM Trigger: CATAGACACAGCGTGAGTGCCCTCAAGTACCACGCAGGCACCTCTCAGGACCAAGCTCAGAAAATGATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127320.2 |
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| CDS CCA 72 bp | AGTGTCAGTACACAGTTACGGTGGCCCCGGAACTCTTaGGACACTTGCCCTTTGTCCACAGTCCACACACGA | + |
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Preference number: 6 (lower is better) Translates to: SVSTQLRWPRNS*DTCPLSTVHTR Trigger: TCGTGTGTGGACTGTGGACAAAGGGCAAGTGTCCCAAGAGTTCCGGGGCCACCGTAACTGTGTACTGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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| CDS CCA 72 bp | AGAAGACTCGGGATGCAGGAGCACCATTTCATGGGCTaGGGGCATCATTTTCTGAGCTTGGTCCTGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RRLGMQEHHFMG*GHHFLSLVLRG Trigger: ACCTCTCAGGACCAAGCTCAGAAAATGATGCCCCCAGCCCATGAAATGGTGCTCCTGCATCCCGAGTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127320.2 |
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| CDS TCA 72 bp | CAGTCCACACACGAGCTGTCCGATCATAGGAACTGCTaGAGAGCTGGTCATTGGCAACTAGGATCCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: QSTHELSDHRNC*RAGHWQLGSCS Trigger: TGAACAGGATCCTAGTTGCCAATGACCAGCTCTTCAGCAGTTCCTATGATCGGACAGCTCGTGTGTGGACTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068693.12 |
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