Pregenerated sensors for WDR83 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005150Ensembl transcript IDs: ENSMUST00000093357.12, ENSMUST00000142201.2, ENSMUST00000149050.2, ENSMUST00000152785.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACACCTTTACACTGGATATGCCGTCTCTAGCTTCATCTAGTGTTTaGACCGGCTCAGGCTTCCGAGAACGACAATCCCAACATCGGACA | + |
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Preference number: 1 (lower is better) Translates to: DTFTLDMPSLASSSV*TGSGFRERQSQHRT Trigger: TGTCCGATGTTGGGATTGTCGTTCTCGGAAGCCTGAGCCGGTGCAAACACTAGATGAAGCTAGAGACGGCATATCCAGTGTAAAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| 3UTR GCA 90 bp | ATCTCTAGAATAAATGGCCCTTTGGTTGGGTTTTCTGAGTCAGTCTaGATCCTTGGTGTCAGGTCCGTAAGCCTCAGCCTGCTCCACCCT | + |
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Preference number: 1 (lower is better) Translates to: ISRINGPLVGFSESV*ILGVRSVSLSLLHP Trigger: AGGGTGGAGCAGGCTGAGGCTTACGGACCTGACACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGGGCCATTTATTCTAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142201.2 |
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| 3UTR GCA 90 bp | GTAAAGACTGAGGCTTTTTGCCACACCTTTATTTATTACTTTACATaGCAGCCCCTCCCTAGGCCCACTCCTTGGTCAGCAGCATCTCTA | + |
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Preference number: 1 (lower is better) Translates to: VKTEAFCHTFIYYFT*QPLPRPTPWSAASL Trigger: TAGAGATGCTGCTGACCAAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTCAGTCTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000142201.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTGGTCAGGCCTGCTCCACCCTCTaGCTCATAGGTCTCTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: PLFITLHASPSLGPLLGQACSTL*LIGLFS Trigger: CGAGAAGAGACCTATGAGGCAGAGGGTGGAGCAGGC...CTGACCAAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142201.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTGGTTTTCTGAGTCAGTCTaGATCCTTGGTGTCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: HTFIYYFTCQPLPRPTPWFSESV*ILGVRS Trigger: GGACCTGACACCAAGGATGCAGACTGACTCAGAAAA...CCAAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000142201.2 |
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| 3UTR TCA 72 bp | GCGGCCATCCACAGAGCCTGCCAAGATCTCATGGTCTaGCACCTTTACACTGGATATGCCGTCTCTAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: AAIHRACQDLMV*HLYTGYAVSSF Trigger: GAAGCTAGAGACGGCATATCCAGTGTAAAGGTGTCAGACCATGAGATCTTGGCAGGCTCTGTGGATGGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| 3UTR CCA 72 bp | CTCACGCGGCCATCCACAGAGCCTGCCAAGATCTCATaGTCTGACACCTTTACACTGGATATGCCGTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: LTRPSTEPAKIS*SDTFTLDMPSL Trigger: TAGAGACGGCATATCCAGTGTAAAGGTGTCAGACCATGAGATCTTGGCAGGCTCTGTGGATGGCCGCGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| 3UTR GCA 72 bp | ATAAATGGCCCTTTGGTTGGGTTTTCTGAGTCAGTCTaGATCCTTGGTGTCAGGTCCGTAAGCCTCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: INGPLVGFSESV*ILGVRSVSLSL Trigger: CAGGCTGAGGCTTACGGACCTGACACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGGGCCATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142201.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTAGAATAAATGGCCCTTaGGTTGGGTTTTCTGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: FCHTFIYYFTCQPLPRPTRINGP*VGFSES Trigger: TGACTCAGAAAACCCAACCAAAGGGCCATTTATTCT...AGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000142201.2 |
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| CDS-3UTR GCA 90 bp | TCAGTCTGCATCCTTGGTGTCAGGTCCGTAAGCCTCAGCCTGCTCCACCCTCTGCACAGGCAGGGCCAGTaGCAAGGCACCTCGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SVCILGVRSVSLSLLHPLHRQGQ*QGTSPS Trigger: GCTGGGCGAGGTGCCTTGGCACTGGCCCTGCCTGTG...CAGAGGGTGGAGCAGGCTGAGGCTTACGGACCTGACACCAAGGATGCAGACTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142201.2 |
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| CDS-3UTR CCA 90 bp | TCCTTAGGTCATAGCGCCTCACGCGGCCATCCACAGAGCCTGCCAAGATCTCATGCTCGCACCGCGCCCTaGCTGCAGTCCAGCGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLGHSASRGHPQSLPRSHARTAP*LQSSVF Trigger: GAAGACGCTGGACTGCAGCCAGGGCGCGGTGCGAGC...ATGAGATCTTGGCAGGCTCTGTGGATGGCCGCGTGAGGCGCTATGACCTAAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| CDS-3UTR GCA 90 bp | CGTAGTCTGAGGAGACCTGTCCCATCCTTAGGTCATAGCGCCTCACGCGGCCATCACGACCTGCCCAGTTaGTACATCCCACAGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: RSLRRPVPSLGHSASRGHHDLPS*YIPQHH Trigger: GTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTG...ATGGCCGCGTGAGGCGCTATGACCTAAGGATGGGACAGGTCTCCTCAGACTACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| CDS-3UTR CCA 90 bp | TTAGGTCATAGCGCCTCACGCGGCCATCCACAGAGCCTGCCAAGATCTCATGGTGTACTCACTCCAGCGTaGCCCCGAAATTTGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: LGHSASRGHPQSLPRSHGVLTPA*PRNLRT Trigger: CGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTAC...ACCATGAGATCTTGGCAGGCTCTGTGGATGGCCGCGTGAGGCGCTATGACCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| CDS-3UTR GCA 90 bp | CGTAGTCTGAGGAGACCTGTCCCATCCTTAGGTCATAGCGCCTCACGCGGCCATAATTTGCGCACGACCTaGCCAGTTGCTACATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RSLRRPVPSLGHSASRGHNLRTT*PVATSH Trigger: GTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATT...ATGGCCGCGTGAGGCGCTATGACCTAAGGATGGGACAGGTCTCCTCAGACTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| CDS-3UTR GCA 90 bp | ATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTGGTCAGCAGCACACAGGCAGGGCCAGTaGCAAGGCACCCTCTACCAG | + |
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Preference number: 4 (lower is better) Translates to: IYYFTCQPLPRPTPWSAAHRQGQ*QGTLYQ Trigger: CTGGTAGAGGGTGCCTTGGCACTGGCCCTGCCTGTG...TGCTGCTGACCAAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR GCA 90 bp | CCTTTGGTTGGGTTTTCTGAGTCAGTCTGCATCCTTGGTGTCAGGTCCGTAAGCCACGACCTGCCCAGTTaGTACATCCCACAGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: PLVGFSESVCILGVRSVSHDLPS*YIPQHH Trigger: GTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTG...GCTTACGGACCTGACACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR GCA 90 bp | GCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTCGTGGCCCCGAAATTTaGGCACGACCTGCCCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: ATPLFITLHASPSLGPLLRGPEI*ARPAQL Trigger: CAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACG...AAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR GCA 90 bp | ATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTGGTCAGCAGCAGATATCAGAGTGCACTaGCCGTCCCGGCTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IYYFTCQPLPRPTPWSAADIRVH*PSRLKQ Trigger: CTGCTTCAGCCGGGACGGGCAGTGCACTCTGATATC...TGCTGCTGACCAAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CCA 90 bp | AGACTGAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCGCTCGCACCGCGCCCTaGCTGCAGTCCAGCGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RLRLFATPLFITLHASPSARTAP*LQSSVF Trigger: GAAGACGCTGGACTGCAGCCAGGGCGCGGTGCGAGC...GGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTCAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CCA 90 bp | GCACCGGCTCAGGCTTCCGAGAACGACAATCCCAACATCGGACACTGGAATCGACCACCAGAACAGAGATaGCTGTTATCAAAGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: APAQASENDNPNIGHWNRPPEQR*LLSKEP Trigger: TGGCTCCTTTGATAACAGCCATCTCTGTTCTGGTGG...TCGATTCCAGTGTCCGATGTTGGGATTGTCGTTCTCGGAAGCCTGAGCCGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGGTTGGGTTTTCTGAGTCAGTCTGCATCCTTGGTGTCAGGTCCGTAAGCTTCACCTTTCCAGCGTaGCCCCGAAATTTGCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PLVGFSESVCILGVRSVSFTFPA*PRNLRT Trigger: CGTGCGCAAATTTCGGGGCCACGCTGGAAAGGTGAA...GCTTACGGACCTGACACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CCA 90 bp | CCTTTGGTTGGGTTTTCTGAGTCAGTCTGCATCCTTGGTGTCAGGTCCGTAAGCTCTTCTCGCCAGTACTaGATGCTGCCTCCCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: PLVGFSESVCILGVRSVSSSRQY*MLPPMA Trigger: TGCCATGGGAGGCAGCATCCAGTACTGGCGAGAAGA...GCTTACGGACCTGACACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR TCA 90 bp | GAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCGTCTTCAGAGCAGCTaGCCACATGTGTGTCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: EAFCHTFIYYFTCQPLPRRLQSS*PHVCRA Trigger: AGCGCGACACACATGTGGTCAGCTGCTCTGAAGACG...CCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR GCA 90 bp | CCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTGGTCAGAATTTGCGCACGACCTaGCCAGTTGCTACATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PLFITLHASPSLGPLLGQNLRTT*PVATSH Trigger: GTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATT...CTGACCAAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR GCA 90 bp | GAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCTCGCCAGTACTGGATaGTGCCTCCCATGGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EAFCHTFIYYFTCQPLPRLASTG*CLPWQS Trigger: TGACTGCCATGGGAGGCAGCATCCAGTACTGGCGAG...CCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR GCA 90 bp | CTGAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGCCTGCTCCACCCTCTaGCTCATAGGTCTCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: LRLFATPLFITLHASPSLACSTL*LIGLFS Trigger: CGAGAAGAGACCTATGAGGCAGAGGGTGGAGCAGGC...TAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CCA 90 bp | AGACTGAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCGGATGCTGCCTCCCATaGCAGTCAGTAGGCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RLRLFATPLFITLHASPSGCCLP*QSVGRV Trigger: AACCCTGCCTACTGACTGCCATGGGAGGCAGCATCC...GGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR TCA 90 bp | GTAAAGACTGAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCGCTGCCCACGTAGTCTaGGGAGACCTGTCCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: VKTEAFCHTFIYYFTCQPAAHVV*GDLSHP Trigger: AGGATGGGACAGGTCTCCTCAGACTACGTGGGCAGC...GGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTCAGTCTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CCA 90 bp | GCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTCCTGCCAAGATCTCATaGTCTGACACCTTTACACTG | + |
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Preference number: 4 (lower is better) Translates to: ATPLFITLHASPSLGPLLPAKIS*SDTFTL Trigger: CAGTGTAAAGGTGTCAGACCATGAGATCTTGGCAGG...AAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CCA 90 bp | TTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCACCAGAACAGAGATaGCTGTTATCAAAGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FCHTFIYYFTCQPLPRPTPPEQR*LLSKEP Trigger: TGGCTCCTTTGATAACAGCCATCTCTGTTCTGGTGG...AGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| 3UTR CAA 72 bp | TCCTTGGTCAGCAGCATCTCTAGAATAAATGGCCCTTaGGTTGGGTTTTCTGAGTCAGTCTGCATCCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLVSSISRINGP*VGFSESVCILG Trigger: ACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGGGCCATTTATTCTAGAGATGCTGCTGACCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000142201.2 |
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| CDS-3UTR TCA 90 bp | GAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCCTCCCTAGGGCCTCTTCATTAAACTaGACGGTGTTCACCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: EAFCHTFIYYFTCQPLPRASSLN*TVFTFP Trigger: TGGAAAGGTGAACACCGTTCAGTTTAATGAAGAGGC...CCTAGGGAGGGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CCA 90 bp | CACTCCTTGGTCAGCAGCATCTCTAGAATAAATGGCCCTTTGGTTGGGTTTTCTTCCAGCTTGTACTGCTaGTTCTTATGGCCAACATAC | + |
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Preference number: 4 (lower is better) Translates to: HSLVSSISRINGPLVGFSSSLYC*FLWPTY Trigger: GTATGTTGGCCATAAGAACCAGCAGTACAAGCTGGA...AGAAAACCCAACCAAAGGGCCATTTATTCTAGAGATGCTGCTGACCAAGGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR TCA 90 bp | CACTCCTTGGTCAGCAGCATCTCTAGAATAAATGGCCCTTTGGTTGGGTTTTCTCAAGATCTCATGGTCTaGCACCTTTACACTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: HSLVSSISRINGPLVGFSQDLMV*HLYTGY Trigger: ATATCCAGTGTAAAGGTGTCAGACCATGAGATCTTG...AGAAAACCCAACCAAAGGGCCATTTATTCTAGAGATGCTGCTGACCAAGGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR GCA 90 bp | ATCTCTAGAATAAATGGCCCTTTGGTTGGGTTTTCTGAGTCAGTCTGCATCCTTCAGTCCAGCTTGTACTaGTGGTTCTTATGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: ISRINGPLVGFSESVCILQSSLY*WFLWPT Trigger: TGTTGGCCATAAGAACCAGCAGTACAAGCTGGACTG...AAGGATGCAGACTGACTCAGAAAACCCAACCAAAGGGCCATTTATTCTAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS GCA 90 bp | CACCTTTCCAGCGTGGCCCCGAAATTTGCGCACGACCTGCCCAGTTaGTACATCCCACAGCACCACCGTCTTGTCCCCGCCACCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: HLSSVAPKFAHDLPS*YIPQHHRLVPATRT Trigger: TGTTCTGGTGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS GCA 90 bp | ACGGTGTTCACCTTTCCAGCGTGGCCCCGAAATTTGCGCACGACCTaGCCAGTTGCTACATCCCACAGCACCACCGTCTTGTCCCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: TVFTFPAWPRNLRTT*PVATSHSTTVLSPP Trigger: TGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAAAGGTGAACACCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS GCA 90 bp | TCTAGAAGCCGCAGAGTAGAGTCCAGGCTGGATATCAGAGTGCACTaGCCGTCCCGGCTGAAGCAGGTGCAGGTGATAGGGCTGCCCACG | + |
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Preference number: 5 (lower is better) Translates to: SRSRRVESRLDIRVH*PSRLKQVQVIGLPT Trigger: CGTGGGCAGCCCTATCACCTGCACCTGCTTCAGCCGGGACGGGCAGTGCACTCTGATATCCAGCCTGGACTCTACTCTGCGGCTTCTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000152785.8 |
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| CDS GCA 90 bp | ACTCACTCCAGCGTGGCCCCGAAATTTGCGCACGACCTGCCCAGTTaGTACATCCCACAGCACCACCGTCTTGTCCCCGCCACCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: THSSVAPKFAHDLPS*YIPQHHRLVPATRT Trigger: TGTTCTGGTGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS GCA 90 bp | TCGCTTGTACTCACTCCAGCGTGGCCCCGAAATTTGCGCACGACCTaGCCAGTTGCTACATCCCACAGCACCACCGTCTTGTCCCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: SLVLTPAWPRNLRTT*PVATSHSTTVLSPP Trigger: TGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTACAAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS-3UTR CAA 90 bp | CGTAGTCTGAGGAGACCTGTCCCATCCTTAGGTCATAGCGCCTCACGCGGCCATGCGTGGCCCCGAAATTaGCGCACGACCTGCCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RSLRRPVPSLGHSASRGHAWPRN*RTTCPV Trigger: AACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGC...ATGGCCGCGTGAGGCGCTATGACCTAAGGATGGGACAGGTCTCCTCAGACTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| CDS GCA 90 bp | CTGCTCCACCCTCTGCCTCATAGGTCTCTTCTCGCCAGTACTGGATaGTGCCTCCCATGGCAGTCAGTAGGCAGGGTTCCGTGGGATGGT | + |
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Preference number: 5 (lower is better) Translates to: LLHPLPHRSLLASTG*CLPWQSVGRVPWDG Trigger: ACCATCCCACGGAACCCTGCCTACTGACTGCCATGGGAGGCAGCATCCAGTACTGGCGAGAAGAGACCTATGAGGCAGAGGGTGGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS GCA 90 bp | CGAGGGTCTTCTCGCTTGTACTCACTCCAGCGTGGCCCCGAAATTTaGGCACGACCTGCCCAGTTGCTACATCCCACAGCACCACCGTCT | + |
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Preference number: 5 (lower is better) Translates to: RGSSRLYSLQRGPEI*ARPAQLLHPTAPPS Trigger: AGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTACAAGCGAGAAGACCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS GCA 90 bp | CTCCACCCTCTGCCTCATAGGTCTCTTCTCGCCAGTACTGGATGCTaGCTCCCATGGCAGTCAGTAGGCAGGGTTCCGTGGGATGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: LHPLPHRSLLASTGC*LPWQSVGRVPWDGK Trigger: CTTACCATCCCACGGAACCCTGCCTACTGACTGCCATGGGAGGCAGCATCCAGTACTGGCGAGAAGAGACCTATGAGGCAGAGGGTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS CCA 90 bp | CTGCCTCATAGGTCTCTTCTCGCCAGTACTGGATGCTGCCTCCCATaGCAGTCAGTAGGCAGGGTTCCGTGGGATGGTAAGCCAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: LPHRSLLASTGCCLP*QSVGRVPWDGKPVT Trigger: AGTCACTGGCTTACCATCCCACGGAACCCTGCCTACTGACTGCCATGGGAGGCAGCATCCAGTACTGGCGAGAAGAGACCTATGAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS TCA 90 bp | CCTCTACCAGGTCCCAGAAGAACACTTTCCCGTCTTCAGAGCAGCTaGCCACATGTGTGTCGCGCTCACTCAGGCAGCAGTCCAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: PLPGPRRTLSRLQSS*PHVCRAHSGSSPAC Trigger: ACAAGCTGGACTGCTGCCTGAGTGAGCGCGACACACATGTGGTCAGCTGCTCTGAAGACGGGAAAGTGTTCTTCTGGGACCTGGTAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS CCA 90 bp | ATGCACACGTTAACGAGGGTCTTCTCGCTTGTACTCACTCCAGCGTaGCCCCGAAATTTGCGCACGACCTGCCCAGTTGCTACATCCCAC | + |
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Preference number: 5 (lower is better) Translates to: MHTLTRVFSLVLTPA*PRNLRTTCPVATSH Trigger: GTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTACAAGCGAGAAGACCCTCGTTAACGTGTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS-3UTR CAA 90 bp | ATGGCCCTTTGGTTGGGTTTTCTGAGTCAGTCTGCATCCTTGGTGTCAGGTCCGGCACGACCTGCCCAGTaGCTACATCCCACAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: MALWLGFLSQSASLVSGPARPAQ*LHPTAP Trigger: TGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGC...CGGACCTGACACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS-3UTR CAA 90 bp | TCAGGCTTCCGAGAACGACAATCCCAACATCGGACACTGGAATCGATAGAACCAGCACGACCTGCCCAGTaGCTACATCCCACAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: SGFRERQSQHRTLESIEPARPAQ*LHPTAP Trigger: TGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGC...TGGTTCTATCGATTCCAGTGTCCGATGTTGGGATTGTCGTTCTCGGAAGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149050.2 |
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| CDS-3UTR CAA 90 bp | ATTTATTACTTTACATGCCAGCCCCTCCCTAGGCCCACTCCTTGGTCAGCAGCAAGGCAGCAGTCCAGCTaGTACTGCTGGTTCTTATGG | + |
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Preference number: 5 (lower is better) Translates to: IYYFTCQPLPRPTPWSAARQQSS*YCWFLW Trigger: CCATAAGAACCAGCAGTACAAGCTGGACTGCTGCCT...TGCTGCTGACCAAGGAGTGGGCCTAGGGAGGGGCTGGCATGTAAAGTAATAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS CCA 90 bp | TCAGGCTTCCGAGAACGACAATCCCAACATCGGACAGGGCTAATATaGATCTCCACAATGCACACGTTAACGAGGGTCTTCTCGCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: SGFRERQSQHRTGLI*ISTMHTLTRVFSLV Trigger: TACAAGCGAGAAGACCCTCGTTAACGTGTGCATTGTGGAGATCCATATTAGCCCTGTCCGATGTTGGGATTGTCGTTCTCGGAAGCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152785.8 |
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| CDS-3UTR CAA 90 bp | GTAAAGACTGAGGCTTTTTGCCACACCTTTATTTATTACTTTACATGCCAGCCCGCGTGGCCCCGAAATTaGCGCACGACCTGCCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: VKTEAFCHTFIYYFTCQPAWPRN*RTTCPV Trigger: AACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGC...GGGCTGGCATGTAAAGTAATAAATAAAGGTGTGGCAAAAAGCCTCAGTCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS GCA 72 bp | GCGCCCTGGCTGCAGTCCAGCGTCTTCATCCGTTTCTaGGGCAGCTCCGGTGCCCGCGGCTTTGGCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: APWLQSSVFIRF*GSSGARGFGSG Trigger: TCCCGAGCCAAAGCCGCGGGCACCGGAGCTGCCGCAGAAACGGATGAAGACGCTGGACTGCAGCCAGGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093357.12 ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS GCA 72 bp | AGCGTGGCCCCGAAATTTGCGCACGACCTGCCCAGTTaGTACATCCCACAGCACCACCGTCTTGTCCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SVAPKFAHDLPS*YIPQHHRLVPA Trigger: GGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093357.12 ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CCA 72 bp | CCGTCCACATTAAATCGCACGGCTCGCACCGCGCCCTaGCTGCAGTCCAGCGTCTTCATCCGTTTCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PSTLNRTARTAP*LQSSVFIRFCG Trigger: GCCGCAGAAACGGATGAAGACGCTGGACTGCAGCCAGGGCGCGGTGCGAGCCGTGCGATTTAATGTGGACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093357.12 ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CAA 72 bp | CAGCGTGGCCCCGAAATTTGCGCACGACCTGCCCAGTaGCTACATCCCACAGCACCACCGTCTTGTCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: QRGPEICARPAQ*LHPTAPPSCPR Trigger: GCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093357.12 ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CAA 90 bp | TCACCTTTCCAGCGTGGCCCCGAAATTTGCGCACGACCTGCCCAGTaGCTACATCCCACAGCACCACCGTCTTGTCCCCGCCACCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: SPFQRGPEICARPAQ*LHPTAPPSCPRHQN Trigger: GTTCTGGTGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAAAGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS CAA 90 bp | TACTCACTCCAGCGTGGCCCCGAAATTTGCGCACGACCTGCCCAGTaGCTACATCCCACAGCACCACCGTCTTGTCCCCGCCACCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: YSLQRGPEICARPAQ*LHPTAPPSCPRHQN Trigger: GTTCTGGTGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS GCA 72 bp | CGCAGAGTAGAGTCCAGGCTGGATATCAGAGTGCACTaGCCGTCCCGGCTGAAGCAGGTGCAGGTGATAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRVESRLDIRVH*PSRLKQVQVIG Trigger: CCCTATCACCTGCACCTGCTTCAGCCGGGACGGGCAGTGCACTCTGATATCCAGCCTGGACTCTACTCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000152785.8 |
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| CDS GCA 72 bp | CTCACTCCAGCGTGGCCCCGAAATTTGCGCACGACCTaGCCAGTTGCTACATCCCACAGCACCACCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LTPAWPRNLRTT*PVATSHSTTVL Trigger: CAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CAA 90 bp | ACGAGGGTCTTCTCGCTTGTACTCACTCCAGCGTGGCCCCGAAATTaGCGCACGACCTGCCCAGTTGCTACATCCCACAGCACCACCGTC | + |
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Preference number: 6 (lower is better) Translates to: TRVFSLVLTPAWPRN*RTTCPVATSHSTTV Trigger: GACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTACAAGCGAGAAGACCCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS GCA 72 bp | ACCTTTCCAGCGTGGCCCCGAAATTTGCGCACGACCTaGCCAGTTGCTACATCCCACAGCACCACCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TFPAWPRNLRTT*PVATSHSTTVL Trigger: CAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS GCA 72 bp | CCTCTGCCTCATAGGTCTCTTCTCGCCAGTACTGGATaGTGCCTCCCATGGCAGTCAGTAGGCAGGGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: PLPHRSLLASTG*CLPWQSVGRVP Trigger: CGGAACCCTGCCTACTGACTGCCATGGGAGGCAGCATCCAGTACTGGCGAGAAGAGACCTATGAGGCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS CAA 90 bp | TTGCGCACGACCTGCCCAGTTGCTACATCCCACAGCACCACCGTCTaGTCCCCGCCACCAGAACAGAGATGGCTGTTATCAAAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LRTTCPVATSHSTTV*SPPPEQRWLLSKEP Trigger: TGGCTCCTTTGATAACAGCCATCTCTGTTCTGGTGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093357.12 ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CAA 90 bp | CAGCTGACCACATGTGTGTCGCGCTCACTCAGGCAGCAGTCCAGCTaGTACTGCTGGTTCTTATGGCCAACATACTCGCCCAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QLTTCVSRSLRQQSS*YCWFLWPTYSPSSS Trigger: GGAGCTGCTGGGCGAGTATGTTGGCCATAAGAACCAGCAGTACAAGCTGGACTGCTGCCTGAGTGAGCGCGACACACATGTGGTCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000152785.8 |
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| CDS GCA 72 bp | GAACGGTGTTCACCTTTCCAGCGTGGCCCCGAAATTTaGGCACGACCTGCCCAGTTGCTACATCCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: ERCSPFQRGPEI*ARPAQLLHPTA Trigger: TGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAAAGGTGAACACCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS GCA 72 bp | TCTCGCTTGTACTCACTCCAGCGTGGCCCCGAAATTTaGGCACGACCTGCCCAGTTGCTACATCCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRLYSLQRGPEI*ARPAQLLHPTA Trigger: TGCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTACAAGCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CCA 72 bp | TCGCGCTCACTCAGGCAGCAGTCCAGCTTGTACTGCTaGTTCTTATGGCCAACATACTCGCCCAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRSLRQQSSLYC*FLWPTYSPSSS Trigger: GGAGCTGCTGGGCGAGTATGTTGGCCATAAGAACCAGCAGTACAAGCTGGACTGCTGCCTGAGTGAGCGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000152785.8 |
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| CDS CCA 72 bp | AGGTCTCTTCTCGCCAGTACTGGATGCTGCCTCCCATaGCAGTCAGTAGGCAGGGTTCCGTGGGATGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: RSLLASTGCCLP*QSVGRVPWDGK Trigger: CTTACCATCCCACGGAACCCTGCCTACTGACTGCCATGGGAGGCAGCATCCAGTACTGGCGAGAAGAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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| CDS CAA 72 bp | TTCTCGCTTGTACTCACTCCAGCGTGGCCCCGAAATTaGCGCACGACCTGCCCAGTTGCTACATCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: FSLVLTPAWPRN*RTTCPVATSHS Trigger: GCTGTGGGATGTAGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTACAAGCGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CCA 72 bp | TTAACGAGGGTCTTCTCGCTTGTACTCACTCCAGCGTaGCCCCGAAATTTGCGCACGACCTGCCCAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LTRVFSLVLTPA*PRNLRTTCPVA Trigger: AGCAACTGGGCAGGTCGTGCGCAAATTTCGGGGCCACGCTGGAGTGAGTACAAGCGAGAAGACCCTCGTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CAA 72 bp | ACCTGCCCAGTTGCTACATCCCACAGCACCACCGTCTaGTCCCCGCCACCAGAACAGAGATGGCTGTTATCA | + |
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Preference number: 6 (lower is better) Translates to: TCPVATSHSTTV*SPPPEQRWLLS Trigger: TGATAACAGCCATCTCTGTTCTGGTGGCGGGGACAAGACGGTGGTGCTGTGGGATGTAGCAACTGGGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093357.12 ENSMUST00000149050.2 ENSMUST00000152785.8 |
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| CDS CAA 72 bp | ACATGTGTGTCGCGCTCACTCAGGCAGCAGTCCAGCTaGTACTGCTGGTTCTTATGGCCAACATACTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: TCVSRSLRQQSS*YCWFLWPTYSP Trigger: GGGCGAGTATGTTGGCCATAAGAACCAGCAGTACAAGCTGGACTGCTGCCTGAGTGAGCGCGACACACATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093357.12 ENSMUST00000152785.8 |
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| CDS TCA 72 bp | GAACCAGACAGGATGACTGTAGCCTCTTCATTAAACTaGACGGTGTTCACCTTTCCAGCGTGGCCCCGAAAT | + |
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Preference number: 6 (lower is better) Translates to: EPDRMTVASSLN*TVFTFPAWPRN Trigger: ATTTCGGGGCCACGCTGGAAAGGTGAACACCGTTCAGTTTAATGAAGAGGCTACAGTCATCCTGTCTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093357.12 |
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