Pregenerated sensors for WDR77 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000561Ensembl transcript IDs: ENSMUST00000010278.12, ENSMUST00000128005.2, ENSMUST00000130994.8
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTGAGAATCTGCCTGTTACTGCACGGGGCTAGGGAGGAAACATaGTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: RLRICLLLHGAREET*STRLLCSHTWKAGA Trigger: TGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACAGGCAGATTCTCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR CCA 90 bp | CCAACCCACCCACTCCTACTTGCTGGCCCTGGCATTCCCCTATACTaGGGCATAGAACCTTCACAAGACCAAGGGCCTTTTCTCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: PTHPLLLAGPGIPLY*GIEPSQDQGPFLPL Trigger: CAGTGGGAGAAAAGGCCCTTGGTCTTGTGAAGGTTCTATGCCCCAGTATAGGGGAATGCCAGGGCCAGCAAGTAGGAGTGGGTGGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR GCA 90 bp | ATGCAAGTCCTTGCTTCCACAGTCCCAACCCCAGGTGACCTTGACTaGAAACTCTCAAGCGTTTTGCTCGAGGGTAATTACAACAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: MQVLASTVPTPGDLD*KLSSVLLEGNYNRG Trigger: GCCTCTGTTGTAATTACCCTCGAGCAAAACGCTTGAGAGTTTGCAGTCAAGGTCACCTGGGGTTGGGACTGTGGAAGCAAGGACTTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR CCA 90 bp | CACATACATCCATTTACAGAGGAAGTTTCTTCCTCTGAGTCACTATaGGATGCAGCCTCCCTCAGGCTGAGAATCTGCCTGTTACTGCAC | + |
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Preference number: 1 (lower is better) Translates to: HIHPFTEEVSSSESL*DAASLRLRICLLLH Trigger: GTGCAGTAACAGGCAGATTCTCAGCCTGAGGGAGGCTGCATCCCATAGTGACTCAGAGGAAGAAACTTCCTCTGTAAATGGATGTATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR CCA 90 bp | GGGATACCCACATTCCATATCCCTAACATCGCCAATTCCCAGACATaGGAAGCATTAAAATCCTCTGGTCACTTTGTCAGGGGTAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: GIPTFHIPNIANSQT*EALKSSGHFVRGKE Trigger: CTCTTTACCCCTGACAAAGTGACCAGAGGATTTTAATGCTTCCCATGTCTGGGAATTGGCGATGTTAGGGATATGGAATGTGGGTATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR TCA 90 bp | AGGAAAACACTCATCTCTCACACACAACACCAAGGAAGGAAAGGGTaGACAAGAGCTACACTGCAGGGCCAAATTTATTCACCCAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: RKTLISHTQHQGRKG*TRATLQGQIYSPRK Trigger: TTTTCTGGGTGAATAAATTTGGCCCTGCAGTGTAGCTCTTGTTCACCCTTTCCTTCCTTGGTGTTGTGTGTGAGAGATGAGTGTTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR GCA 90 bp | CTCACACACAACACCAAGGAAGGAAAGGGTGAACAAGAGCTACACTaGAGGGCCAAATTTATTCACCCAGAAAATGGATTTGACTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: LTHNTKEGKGEQELH*RAKFIHPENGFDSV Trigger: TACTGAGTCAAATCCATTTTCTGGGTGAATAAATTTGGCCCTGCAGTGTAGCTCTTGTTCACCCTTTCCTTCCTTGGTGTTGTGTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR CCA 90 bp | ATTCCTTCAGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTaGAAAGCTCCAATAAGATCAGTTACAGATCCACAGTCTCTAATG | + |
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Preference number: 1 (lower is better) Translates to: IPSGRPFYVLFLNPS*KAPIRSVTDPQSLM Trigger: CATTAGAGACTGTGGATCTGTAACTGATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCTGAAGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR CCA 90 bp | AAAGCTCCAATAAGATCAGTTACAGATCCACAGTCTCTAATGGAGTaGAATACAGTAGATTACAAAGACAGTGGGCAGCTAAGTCTGACA | + |
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Preference number: 1 (lower is better) Translates to: KAPIRSVTDPQSLME*NTVDYKDSGQLSLT Trigger: TGTCAGACTTAGCTGCCCACTGTCTTTGTAATCTACTGTATTCCACTCCATTAGAGACTGTGGATCTGTAACTGATCTTATTGGAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCCTGTGCTCTCACACATaGAAGGCAGGGGCAATCGAG | + |
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Preference number: 2 (lower is better) Translates to: GGNMLYKAPVLSHMEGRGLCSHT*KAGAIE Trigger: CTCGATTGCCCCTGCCTTCCATGTGTGAGAGCACAG...GCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACAGCACAACATGGTGGATaGCCTGATGGTCCCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: YCTGLGRKHALQGSCALTAQHGG*PDGPSQ Trigger: TTGGCTGGGACCATCAGGTCATCCACCATGTTGTGC...TGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCCTGTGCTCTCACACATaGAAGGCAGGGGCAATCGAG | + |
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Preference number: 2 (lower is better) Translates to: CYCTGLGRKHALQGSCALLCSHT*KAGAIE Trigger: CTCGATTGCCCCTGCCTTCCATGTGTGAGAGCACAG...GAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACTCCTCTGAGTCACTATaGGATGCAGCCTCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLHGAREETCSTRLLCSHSSESL*DAASLR Trigger: CCTGAGGGAGGCTGCATCCCATAGTGACTCAGAGGA...GTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACTGTCCCCACCCATCCCTTCCAAGTTCCTGGTGACACACAGCACCTGTGTGCTGAGGGTACAGCTTaGATTCTTGGTGTCCACAAG | + |
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Preference number: 2 (lower is better) Translates to: TTVPTHPFQVPGDTQHLCAEGTA*ILGVHK Trigger: CTTGTGGACACCAAGAATGCAAGCTGTACCCTCAGC...ACACAGGTGCTGTGTGTCACCAGGAACTTGGAAGGGATGGGTGGGGACAGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGACAGTGGGCAGCTAAGTCTGACACTGGTGATTCACCTAAGCGAAGCAGGACATGGTGGATGACCTaGTGGTCCCAGCCAACTGTG | + |
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Preference number: 2 (lower is better) Translates to: QRQWAAKSDTGDSPKRSRTWWMT*WSQPTV Trigger: CACAGTTGGCTGGGACCATCAGGTCATCCACCATGT...CCTGCTTCGCTTAGGTGAATCACCAGTGTCAGACTTAGCTGCCCACTGTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCCTCACAAAGTCTCTGTaGGCTCGACTTCTAAACACC | + |
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Preference number: 2 (lower is better) Translates to: GGNMLYKAPVLSHMEGRGLTKSL*ARLLNT Trigger: GGTGTTTAGAAGTCGAGCCCACAGAGACTTTGTGAG...GCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR GCA 90 bp | AAACATGCTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGTCTACAAGGCTCCTGTaGTCTCACACATGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KHALQGSCALTHGRQGQSSTRLL*SHTWKA Trigger: TGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGA...CGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACAAGGGAGTGATTGAGTaGAGACCACGTAGCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: LLHGAREETCSTRLLCSHKGVIE*RPRSIS Trigger: AGAGATGCTACGTGGTCTCCACTCAATCACTCCCTT...GTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACCCCAGAAAATGGATTTaGCTCAGTATAACAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: LLHGAREETCSTRLLCSHPRKWI*LSITGT Trigger: AGTCCCTGTTATACTGAGTCAAATCCATTTTCTGGG...GTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR CAA 90 bp | CCCCACTGTAAACTGAGACAGGGGAGAAGGCATCCTGATGGCCACTaGAGGTTTAGGTCTTACTACCATTACAATCCCAAGGAAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: PHCKLRQGRRHPDGH*RFRSYYHYNPKERQ Trigger: TTGCCTTTCCTTGGGATTGTAATGGTAGTAAGACCTAAACCTCAAGTGGCCATCAGGATGCCTTCTCCCCTGTCTCAGTTTACAGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | ACACGTGTACTCACATACATCCATTTACAGAGGAAGTTTCTTCCTCTGAGTCACCAGCCTCCCTCAGGCTaGGAATCTGCCTGTTACTGC | + |
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Preference number: 2 (lower is better) Translates to: TRVLTYIHLQRKFLPLSHQPPSG*ESACYC Trigger: GCAGTAACAGGCAGATTCTCAGCCTGAGGGAGGCTG...GTGACTCAGAGGAAGAAACTTCCTCTGTAAATGGATGTATGTGAGTACACGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR GCA 90 bp | GAGATACCTAGAAAACTAGTAACACCTGTCATCACCCGAGACTACACAGATCTTGGTAGCCAGAGGCATTaGAGGCCATCTGTGATGCCG | + |
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Preference number: 2 (lower is better) Translates to: EIPRKLVTPVITRDYTDLGSQRH*RPSVMP Trigger: CGGCATCACAGATGGCCTGCAATGCCTCTGGCTACC...AAGATCTGTGTAGTCTCGGGTGATGACAGGTGTTACTAGTTTTCTAGGTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TACATTCAGACTTCAGCTCTCCAGAGGAAGGTACCCAGATCAATTTTTAGGTGGTCCTCTGAGTCACTATaGGATGCAGCCTCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: YIQTSALQRKVPRSIFRWSSESL*DAASLR Trigger: CCTGAGGGAGGCTGCATCCCATAGTGACTCAGAGGA...CCACCTAAAAATTGATCTGGGTACCTTCCTCTGGAGAGCTGAAGTCTGAATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TACATTCAGACTTCAGCTCTCCAGAGGAAGGTACCCAGATCAATTTTTAGGTGGGTCTCAGACCTTGGCTaGCCAGAGGTCAGCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: YIQTSALQRKVPRSIFRWVSDLG*PEVSSS Trigger: TGAACTGCTGACCTCTGGCCAGCCAAGGTCTGAGAC...CCACCTAAAAATTGATCTGGGTACCTTCCTCTGGAGAGCTGAAGTCTGAATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | CTTACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAACACATGGTGGATGACCTaGTGGTCCCAGCCAACTGTG | + |
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Preference number: 2 (lower is better) Translates to: LTDGGLVLVFLKSILLHNTWWMT*WSQPTV Trigger: CACAGTTGGCTGGGACCATCAGGTCATCCACCATGT...GTTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAACACTTCCTCTGAGTCACTATaGGATGCAGCCTCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: TDGGLVLVFLKSILLHNTSSESL*DAASLR Trigger: CCTGAGGGAGGCTGCATCCCATAGTGACTCAGAGGA...AGTGTTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TTCACCCAGAAAATGGATTTGACTCAGTATAACAGGGACTTGTACAAAACTGTTCAGCCTCCCTCAGGCTaGGAATCTGCCTGTTACTGC | + |
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Preference number: 2 (lower is better) Translates to: FTQKMDLTQYNRDLYKTVQPPSG*ESACYC Trigger: GCAGTAACAGGCAGATTCTCAGCCTGAGGGAGGCTG...AACAGTTTTGTACAAGTCCCTGTTATACTGAGTCAAATCCATTTTCTGGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAACACGGAAGTTTCTTCCTCTaGGTCACTATGGGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: YRRRACFGFSEIHSTPQHGSFFL*VTMGCS Trigger: GCTGCATCCCATAGTGACTCAGAGGAAGAAACTTCC...GTGTTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTTATTCATGTGCATACATGGAGACAACTTGCAGTCAAGAGTCCTTTTGCCATATCAGGGCCAGCCCTaGCCCCACTGTAAACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FLFMCIHGDNLQSRVLLPYQGQP*PHCKLR Trigger: TCTCAGTTTACAGTGGGGTCAGGGCTGGCCCTGATA...TGGCAAAAGGACTCTTGACTGCAAGTTGTCTCCATGTATGCACATGAATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAACACTCTACAAGGCTCCTGTaGTCTCACACATGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: YRRRACFGFSEIHSTPQHSTRLL*SHTWKA Trigger: TGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGA...GTGTTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGGACATCTGTGGCACGAATTAATCAATGTGGATTACTTTTACCAATACAGATCTGTGATGCCGGCTTaGGACAGCGGGTATCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VGHLWHELINVDYFYQYRSVMPA*DSGYPR Trigger: TCTGGGATACCCGCTGTCCCAAGCCGGCATCACAGA...TCTGTATTGGTAAAAGTAATCCACATTGATTAATTCGTGCCACAGATGTCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTTTCCTAAACCCAAGTTGGAAAGCTCCAATAAGATCAGTTACAGATCCAGGAAGTTTCTTCCTCTaGGTCACTATGGGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VLFLNPSWKAPIRSVTDPGSFFL*VTMGCS Trigger: GCTGCATCCCATAGTGACTCAGAGGAAGAAACTTCC...TGGATCTGTAACTGATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TTCACCCAGAAAATGGATTTGACTCAGTATAACAGGGACTTGTACAAAACTGTTGCACAACATGGTGGATaGCCTGATGGTCCCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: FTQKMDLTQYNRDLYKTVAQHGG*PDGPSQ Trigger: TTGGCTGGGACCATCAGGTCATCCACCATGTTGTGC...AACAGTTTTGTACAAGTCCCTGTTATACTGAGTCAAATCCATTTTCTGGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGGACATCTGTGGCACGAATTAATCAATGTGGATTACTTTTACCAATACAGACTTCCAAGTTCCTGGTaGCACACAGCACCTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: VGHLWHELINVDYFYQYRLPSSW*HTAPVW Trigger: CCACACAGGTGCTGTGTGTCACCAGGAACTTGGAAG...TCTGTATTGGTAAAAGTAATCCACATTGATTAATTCGTGCCACAGATGTCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR GCA 90 bp | GAGATACCTAGAAAACTAGTAACACCTGTCATCACCCGAGACTACACAGATCTTTACCTCACTGAGGCTTaGAGTGCTGGAACTATTCTC | + |
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Preference number: 2 (lower is better) Translates to: EIPRKLVTPVITRDYTDLYLTEA*SAGTIL Trigger: GAGAATAGTTCCAGCACTGCAAGCCTCAGTGAGGTA...AAGATCTGTGTAGTCTCGGGTGATGACAGGTGTTACTAGTTTTCTAGGTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATACCTAGAAAACTAGTAACACCTGTCATCACCCGAGACTACACAGATCTTTTCCGACAGTTTCCCTaGTGCTGGATCTCAAATCTT | + |
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Preference number: 2 (lower is better) Translates to: EIPRKLVTPVITRDYTDLFRQFP*CWISNL Trigger: AAGATTTGAGATCCAGCATCAGGGAAACTGTCGGAA...AAGATCTGTGTAGTCTCGGGTGATGACAGGTGTTACTAGTTTTCTAGGTATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR CAA 90 bp | CATTCCTTCAGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTaGGAAAGCTCCAATAAGATCAGTTACAGATCCACAGTCTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: HSFRAPILCAFPKPK*ESSNKISYRSTVSN Trigger: ATTAGAGACTGTGGATCTGTAACTGATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCTGAAGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TACATTCAGACTTCAGCTCTCCAGAGGAAGGTACCCAGATCAATTTTTAGGTGGTTCCTAAACCCAAGTTaGAAAGCTCCAATAAGATCA | + |
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Preference number: 2 (lower is better) Translates to: YIQTSALQRKVPRSIFRWFLNPS*KAPIRS Trigger: TGATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAA...CCACCTAAAAATTGATCTGGGTACCTTCCTCTGGAGAGCTGAAGTCTGAATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGTACCAGGTCCCAAATTTTaGTGCAGCAGTCTTTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: YKTLCTVHIQYLFKIGAVPGPKF*CSSLCY Trigger: GTAGCAAAGACTGCTGCATCAAAATTTGGGACCTGG...TACAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAGGCCTCTTTCTGAATATCCTGTCCTTCCTTATGTATTGCAAAAAGATCTCACAAAGTCTCTGTaGGCTCGACTTCTAAACACC | + |
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Preference number: 2 (lower is better) Translates to: FRRPLSEYPVLPYVLQKDLTKSL*ARLLNT Trigger: GGTGTTTAGAAGTCGAGCCCACAGAGACTTTGTGAG...ATCTTTTTGCAATACATAAGGAAGGACAGGATATTCAGAAAGAGGCCTTCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTTATTCATGTGCATACATGGAGACAACTTGCAGTCAAGAGTCCTTTTGCCAATTTTCCCACTTCACTaGAACACTTTTAAGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: FLFMCIHGDNLQSRVLLPIFPLH*NTFKWS Trigger: GGACCACTTAAAAGTGTTTCAGTGAAGTGGGAAAAT...TGGCAAAAGGACTCTTGACTGCAAGTTGTCTCCATGTATGCACATGAATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGGACATCTGTGGCACGAATTAATCAATGTGGATTACTTTTACCAATACAGACTGTCCTTACCTAAGTaGCACAAAGCACAAGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: VGHLWHELINVDYFYQYRLSLPK*HKAQAL Trigger: TAAAGCTTGTGCTTTGTGTCACTTAGGTAAGGACAG...TCTGTATTGGTAAAAGTAATCCACATTGATTAATTCGTGCCACAGATGTCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR GCA 90 bp | GAGATACCTAGAAAACTAGTAACACCTGTCATCACCCGAGACTACACAGATCTTTACTATGTAGAATTATaGCTGTCATTTACTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: EIPRKLVTPVITRDYTDLYYVEL*LSFTVA Trigger: AGCCACAGTAAATGACAGGCATAATTCTACATAGTA...AAGATCTGTGTAGTCTCGGGTGATGACAGGTGTTACTAGTTTTCTAGGTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| 3UTR-3UTR CCA 90 bp | TACCTATCTTATGCCTTCCCTGAATTTAGTAACAATGCAAGTCCTTGCTTCCACTTCCTAAACCCAAGTTaGAAAGCTCCAATAAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: YLSYAFPEFSNNASPCFHFLNPS*KAPIRS Trigger: TGATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAA...GTGGAAGCAAGGACTTGCATTGTTACTAAATTCAGGGAAGGCATAAGATAGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTATTCATGTGCATACATGGAGACAACTTGCAGTCAAGAGTCCTTTTGCCATACTATGTAGAATTATaGCTGTCATTTACTGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLFMCIHGDNLQSRVLLPYYVEL*LSFTVA Trigger: AGCCACAGTAAATGACAGGCATAATTCTACATAGTA...TGGCAAAAGGACTCTTGACTGCAAGTTGTCTCCATGTATGCACATGAATAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR GCA 90 bp | AATACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGTCCTTCCTTATGTATTaGAAAAAGATAGAGCCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NTRHYALSTYNTFLKSELSFLMY*KKIEPP Trigger: TGGGGGCTCTATCTTTTTGCAATACATAAGGAAGGA...CAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAAGGCCTCTTTCTGAATATCCTGTCCTTCCTTATGTATTGCAAAAAGATCAGTCTCTAATGGAGTaGAATACAGTAGATTACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FRRPLSEYPVLPYVLQKDQSLME*NTVDYK Trigger: TTTGTAATCTACTGTATTCCACTCCATTAGAGACTG...ATCTTTTTGCAATACATAAGGAAGGACAGGATATTCAGAAAGAGGCCTTCTAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | CCTCTGAGTCACTATGGGATGCAGCCTCCCTCAGGCTaGGAATCTGCCTGTTACTGCACGGGGCTAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLSHYGMQPPSG*ESACYCTGLGR Trigger: CCTCCCTAGCCCCGTGCAGTAACAGGCAGATTCTCAGCCTGAGGGAGGCTGCATCCCATAGTGACTCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | CACCACTGTCCCCACCCATCCCTTCCAAGTTCCTGGTaGCACACAGCACCTGTGTGGGGAGAATACCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HHCPHPSLPSSW*HTAPVWGEYQS Trigger: AGACTGGTATTCTCCCCACACAGGTGCTGTGTGTCACCAGGAACTTGGAAGGGATGGGTGGGGACAGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR GCA 72 bp | TCACTATGGGATGCAGCCTCCCTCAGGCTGAGAATCTaGCTGTTACTGCACGGGGCTAGGGAGGAAACATGC | + |
|
Preference number: 3 (lower is better) Translates to: SLWDAASLRLRI*LLLHGAREETC Trigger: GCATGTTTCCTCCCTAGCCCCGTGCAGTAACAGGCAGATTCTCAGCCTGAGGGAGGCTGCATCCCATAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGACAGTGGGCAGCTAAGTCTGACACTGGTGATTCACCTAAGCGAAGCAGGGCCACTAGGATACCTTaGTCCCCCACCCAAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QRQWAAKSDTGDSPKRSRATRIP*SPTQVR Trigger: CCTCACTTGGGTGGGGGACAAAGGTATCCTAGTGGC...CCTGCTTCGCTTAGGTGAATCACCAGTGTCAGACTTAGCTGCCCACTGTCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR GCA 72 bp | ATCTGCCTGTTACTGCACGGGGCTAGGGAGGAAACATaGTCTACAAGGCTCCTGTGCTCTCACACATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ICLLLHGAREET*STRLLCSHTWK Trigger: CTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACAGGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
||
| 3UTR CCA 72 bp | CGAGCACCCACCACTCTAGGAACAAGTCTCAGACCTTaGCTGGCCAGAGGTCAGCAGTTCAATAGTAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RAPTTLGTSLRP*LARGQQFNSSE Trigger: CTCACTACTATTGAACTGCTGACCTCTGGCCAGCCAAGGTCTGAGACTTGTTCCTAGAGTGGTGGGTGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR CCA 72 bp | CCACTCCTACTTGCTGGCCCTGGCATTCCCCTATACTaGGGCATAGAACCTTCACAAGACCAAGGGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLLLAGPGIPLY*GIEPSQDQGPF Trigger: AAAAGGCCCTTGGTCTTGTGAAGGTTCTATGCCCCAGTATAGGGGAATGCCAGGGCCAGCAAGTAGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTTTGATGCAGCAGTCTTaGCTACCACTGACAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ACYCTGLGRKHALQGSCALMQQS*LPLTAC Trigger: ACAAGCTGTCAGTGGTAGCAAAGACTGCTGCATCAA...AGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATTCAGACTTCAGCTCTCCAGAGGAAGGTACCCAGATCAATTTTTAGGTGGATCTGTGATGCCGGCTaGGGACAGCGGGTATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: YIQTSALQRKVPRSIFRWICDAG*GQRVSQ Trigger: CTGGGATACCCGCTGTCCCAAGCCGGCATCACAGAT...CCACCTAAAAATTGATCTGGGTACCTTCCTCTGGAGAGCTGAAGTCTGAATGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | TTCACAAGACCAAGGGCCTTTTCTCCCACTGATGGCTaGCTAGGACATCCTCTGCTGCATATGCAGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FTRPRAFSPTDG*LGHPLLHMQLE Trigger: CTCTAGCTGCATATGCAGCAGAGGATGTCCTAGTCAGCCATCAGTGGGAGAAAAGGCCCTTGGTCTTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR GCA 72 bp | CCCCAGGTGACCTTGACTGCAAACTCTCAAGCGTTTTaGTCGAGGGTAATTACAACAGAGGCTCATGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PQVTLTANSQAF*SRVITTEAHDW Trigger: CCAGTCATGAGCCTCTGTTGTAATTACCCTCGAGCAAAACGCTTGAGAGTTTGCAGTCAAGGTCACCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR CCA 72 bp | CCATTTACAGAGGAAGTTTCTTCCTCTGAGTCACTATaGGATGCAGCCTCCCTCAGGCTGAGAATCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PFTEEVSSSESL*DAASLRLRICL Trigger: CAGGCAGATTCTCAGCCTGAGGGAGGCTGCATCCCATAGTGACTCAGAGGAAGAAACTTCCTCTGTAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 ENSMUST00000130994.8 |
||
| 3UTR CCA 72 bp | GTCCCAGCCAACTGTGGTAAGAAGGGAGTGATTGAGTaGAGACCACGTAGCATCTCTCACAAAGTCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPANCGKKGVIE*RPRSISHKVSV Trigger: CACAGAGACTTTGTGAGAGATGCTACGTGGTCTCCACTCAATCACTCCCTTCTTACCACAGTTGGCTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
||
| 3UTR CCA 72 bp | GCTCACAGAAACCACACTAGCAGCCCACCAGCCCAATaGCTCCTTCTCTACATTAGCAACAGTTACTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: AHRNHTSSPPAQ*LLLYISNSYSD Trigger: GTCTGAGTAACTGTTGCTAATGTAGAGAAGGAGCCATTGGGCTGGTGGGCTGCTAGTGTGGTTTCTGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR GCA 72 bp | AGTACTGCCCCAGCTAAGGACCAATGGAAGCAGCTTTaGCAAATAGATACCTCCTCCCTGTGTCACTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: STAPAKDQWKQL*QIDTSSLCHSI Trigger: AATGGAGTGACACAGGGAGGAGGTATCTATTTGGCAAAGCTGCTTCCATTGGTCCTTAGCTGGGGCAGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | TCACATACATCCATTTACAGAGGAAGTTTCTTCCTCTaGGTCACTATGGGATGCAGCCTCCCTCAGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SHTSIYRGSFFL*VTMGCSLPQAE Trigger: CTCAGCCTGAGGGAGGCTGCATCCCATAGTGACTCAGAGGAAGAAACTTCCTCTGTAAATGGATGTATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | AGTCGCTTACAGACGGAGGGCTTGTTTTGGTTTTTCTaGAATCCATTCTACTCCACAACACTGTCAGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRLQTEGLFWFF*NPFYSTTLSGP Trigger: TGGACCTGACAGTGTTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGTAAGCGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTTCAGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTGGAAAGCTGTCCTTCCTTATGTATaGCAAAAAGATAGAGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: IPSGRPFYVLFLNPSWKAVLPYV*QKDRAP Trigger: GGGGGCTCTATCTTTTTGCAATACATAAGGAAGGAC...AGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCTGAAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR CCA 72 bp | GGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTaGAAAGCTCCAATAAGATCAGTTACAGATCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GRPFYVLFLNPS*KAPIRSVTDPQ Trigger: CTGTGGATCTGTAACTGATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTTCAGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTGGAAAGCTATACATGGAGACAACTaGCAGTCAAGAGTCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IPSGRPFYVLFLNPSWKAIHGDN*QSRVLL Trigger: CAAAAGGACTCTTGACTGCAAGTTGTCTCCATGTAT...AGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCTGAAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR CCA 72 bp | TCTAATGGAGTGGAATACAGTAGATTACAAAGACAGTaGGCAGCTAAGTCTGACACTGGTGATTCACCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SNGVEYSRLQRQ*AAKSDTGDSPK Trigger: CTTAGGTGAATCACCAGTGTCAGACTTAGCTGCCCACTGTCTTTGTAATCTACTGTATTCCACTCCATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGATACCTAGAAAACTAGTAACACCTGTCATCACCCGAGACTACACAGATCTTGACGGAGGGCTTGTTTaGGTTTTTCTGAAATCCATT | + |
|
Preference number: 3 (lower is better) Translates to: EIPRKLVTPVITRDYTDLDGGLV*VFLKSI Trigger: AATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTC...AAGATCTGTGTAGTCTCGGGTGATGACAGGTGTTACTAGTTTTCTAGGTATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAACACGACGGAGGGCTTGTTTaGGTTTTTCTGAAATCCATT | + |
|
Preference number: 3 (lower is better) Translates to: YRRRACFGFSEIHSTPQHDGGLV*VFLKSI Trigger: AATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTC...GTGTTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000128005.2 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTGGAAAGCTCCAATAAGATCCAGTGGGCTAGACTTTaGTATATGGAAGTAATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: APILCAFPKPKLESSNKIQWARL*YMEVIP Trigger: GGGAATTACTTCCATATACAAAAGTCTAGCCCACTG...GATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR GCA 72 bp | GGCCTCTTTCTGAATATCCTGTCCTTCCTTATGTATTaGAAAAAGATAGAGCCCCCAAGCAGATTTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GLFLNILSFLMY*KKIEPPSRFEF Trigger: AAACTCAAATCTGCTTGGGGGCTCTATCTTTTTGCAATACATAAGGAAGGACAGGATATTCAGAAAGAGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTGTACTCACATACATCCATTTACAGAGGAAGTTTCTTCCTCTGAGTCACTATGACGGAGGGCTTGTTTaGGTTTTTCTGAAATCCATT | + |
|
Preference number: 3 (lower is better) Translates to: RVLTYIHLQRKFLPLSHYDGGLV*VFLKSI Trigger: AATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTC...ATAGTGACTCAGAGGAAGAAACTTCCTCTGTAAATGGATGTATGTGAGTACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCTTAGGAGTCCAAAAATACATTCAGACTTCAGCTCTCCAGAGGAAGGTACAGTGGGCTAGACTTTaGTATATGGAAGTAATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QILGVQKYIQTSALQRKVQWARL*YMEVIP Trigger: GGGAATTACTTCCATATACAAAAGTCTAGCCCACTG...TACCTTCCTCTGGAGAGCTGAAGTCTGAATGTATTTTTGGACTCCTAAGATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTTCAGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTGGAAAGCTTTGTACAAAACTGTTTaGTCTTCTCAAGGTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: IPSGRPFYVLFLNPSWKALYKTV*SSQGTV Trigger: CACTGTACCTTGAGAAGACAAAACAGTTTTGTACAA...AGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCTGAAGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATTCAGACTTCAGCTCTCCAGAGGAAGGTACCCAGATCAATTTTTAGGTGGTTGTACAAAACTGTTTaGTCTTCTCAAGGTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YIQTSALQRKVPRSIFRWLYKTV*SSQGTV Trigger: CACTGTACCTTGAGAAGACAAAACAGTTTTGTACAA...CCACCTAAAAATTGATCTGGGTACCTTCCTCTGGAGAGCTGAAGTCTGAATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTGGAAAGCTCCAATAAGATCCAGTATAACAGGGACTaGTACAAAACTGTTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: APILCAFPKPKLESSNKIQYNRD*YKTVLS Trigger: AGACAAAACAGTTTTGTACAAGTCCCTGTTATACTG...GATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | ACTTTTAAGTGGTCCATCATCCCTACAACTTATCTGTaGAATCTAGGACAGGAAAACACTCATCTCTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: TFKWSIIPTTYL*NLGQENTHLSH Trigger: GTGTGAGAGATGAGTGTTTTCCTGTCCTAGATTTCACAGATAAGTTGTAGGGATGATGGACCACTTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | TTTTCAACGATCAAAATAACCCTAGTGTTACCTCACTaGGGCTTGCAGTGCTGGAACTATTCTCGAGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSTIKITLVLPH*GLQCWNYSRDN Trigger: ATTATCTCGAGAATAGTTCCAGCACTGCAAGCCTCAGTGAGGTAACACTAGGGTTATTTTGATCGTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGTAGTCCTTCCTTATGTATaGCAAAAAGATAGAGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YKTLCTVHIQYLFKIGAVVLPYV*QKDRAP Trigger: GGGGGCTCTATCTTTTTGCAATACATAAGGAAGGAC...TACAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | CTGCAGGGCCAAATTTATTCACCCAGAAAATGGATTTaGCTCAGTATAACAGGGACTTGTACAAAACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LQGQIYSPRKWI*LSITGTCTKLF Trigger: AAACAGTTTTGTACAAGTCCCTGTTATACTGAGTCAAATCCATTTTCTGGGTGAATAAATTTGGCCCTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR TCA 72 bp | CACAAAGCACAAGCTTTATCTCTAAGAAGCAGAAACTaGTCCTACCTATCTTATGCCTTCCCTGAATTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: HKAQALSLRSRN*SYLSYAFPEFS Trigger: ACTAAATTCAGGGAAGGCATAAGATAGGTAGGATCAGTTTCTGCTTCTTAGAGATAAAGCTTGTGCTTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR GCA 72 bp | TCGGAGCTGTATATTCTAAAAACAGCAATGTTACGATaGTGTGTGAAGTTGATGACTTTTAGAAGGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SELYILKTAMLR*CVKLMTFRRPL Trigger: AAGAGGCCTTCTAAAAGTCATCAACTTCACACAGCATCGTAACATTGCTGTTTTTAGAATATACAGCTCCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | AATACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGTCATTTACTGTGGCTTaGACTAAGTTGGACATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NTRHYALSTYNTFLKSELSFTVA*TKLDIC Trigger: ACAGATGTCCAACTTAGTCAAAGCCACAGTAAATGA...CAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGTACAGTATAACAGGGACTaGTACAAAACTGTTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YKTLCTVHIQYLFKIGAVQYNRD*YKTVLS Trigger: AGACAAAACAGTTTTGTACAAGTCCCTGTTATACTG...TACAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| CDS-3UTR GCA 90 bp | CTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGAGTAGTCGCGGTAGCCAGAGGCATTaGAGGCCATCTGTGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQGSCALTHGRQGQSSSRGSQRH*RPSVMP Trigger: CGGCATCACAGATGGCCTGCAATGCCTCTGGCTACC...GCGACTACTCGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTTCTGTGATGCCGGCTTaGGACAGCGGGTATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACYCTGLGRKHALQGSCASVMPA*DSGYPR Trigger: TCTGGGATACCCGCTGTCCCAAGCCGGCATCACAGA...AGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
||
| CDS-3UTR TCA 90 bp | AACATGCTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGACGTGCAGCCTCCAATTaGCGTTCCATGCATGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NMLYKAPVLSHMEGRGNRRAASN*RSMHAG Trigger: GCCCGCATGCATGGAACGTCAATTGGAGGCTGCACG...TCGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
||
| CDS-3UTR GCA 90 bp | TACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACAGGTAGCCAGAGGCATTaGAGGCCATCTGTGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YCTGLGRKHALQGSCALTGSQRH*RPSVMP Trigger: CGGCATCACAGATGGCCTGCAATGCCTCTGGCTACC...TGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTGAGTGGAGACCACGTAGCATCTCTCACAAAGTCTCTGTGGGCTCGACTCTGGGAGTGCACAGCTaGGCTGAGGGTACAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VIEWRPRSISHKVSVGSTLGVHS*AEGTAC Trigger: GCAAGCTGTACCCTCAGCTCAGCTGTGCACTCCCAG...AGTCGAGCCCACAGAGACTTTGTGAGAGATGCTACGTGGTCTCCACTCAATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128005.2 |
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| CDS-3UTR TCA 90 bp | AAACATGCTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGACATGGTGGATGACCTaGTGGTCCCAGCCAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHALQGSCALTHGRQGQSTWWMT*WSQPTV Trigger: CACAGTTGGCTGGGACCATCAGGTCATCCACCATGT...CGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR GCA 90 bp | GCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGAGTAGTCGCTTACAGAGCTGAGGGTACAGCTTaGATTCTTGGTGTCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: APVLSHMEGRGNRVVAYRAEGTA*ILGVHK Trigger: CTTGTGGACACCAAGAATGCAAGCTGTACCCTCAGC...TCTGTAAGCGACTACTCGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
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| CDS-3UTR CCA 90 bp | TACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACAAAGGGAGTGATTGAGTaGAGACCACGTAGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCTGLGRKHALQGSCALTKGVIE*RPRSIS Trigger: AGAGATGCTACGTGGTCTCCACTCAATCACTCCCTT...TGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR TCA 90 bp | AACATGCTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGAATCCAGCACAGCAAGTaGACAGTCTTCACTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NMLYKAPVLSHMEGRGNRIQHSK*TVFTER Trigger: TCTCTCAGTGAAGACTGTTCACTTGCTGTGCTGGAT...TCGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTTTCTGAATATCCTGTCCTTCCTTATGTATTGCAAAAAGATAGAGCCTGCATGCGGGCGCATTaGGGGGCAGGTTCCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLSEYPVLPYVLQKDRACMRAH*GAGSTR Trigger: GCGAGTGGAACCTGCCCCCCAATGCGCCCGCATGCA...GGCTCTATCTTTTTGCAATACATAAGGAAGGACAGGATATTCAGAAAGAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| CDS-3UTR GCA 90 bp | GAGTGGAGACCACGTAGCATCTCTCACAAAGTCTCTGTGGGCTCGACTTCTAAAGCTGAGGGTACAGCTTaGATTCTTGGTGTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: EWRPRSISHKVSVGSTSKAEGTA*ILGVHK Trigger: CTTGTGGACACCAAGAATGCAAGCTGTACCCTCAGC...TTTAGAAGTCGAGCCCACAGAGACTTTGTGAGAGATGCTACGTGGTCTCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128005.2 |
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| CDS-3UTR GCA 90 bp | GCTTACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAACCAATTGACGTTCCATaGATGCGGGCGCATTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYRRRACFGFSEIHSTPQPIDVP*MRAHWG Trigger: CCCCCAATGCGCCCGCATGCATGGAACGTCAATTGG...TTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGTAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| CDS-3UTR CCA 90 bp | GGTCTTCTCAAACTATACAAACCAAATAAAGACTACACTGACAAGCTTGGGAAATGCATGCGGGCGCATTaGGGGGCAGGTTCCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKLYKPNKDYTDKLGKCMRAH*GAGSTR Trigger: GCGAGTGGAACCTGCCCCCCAATGCGCCCGCATGCA...TTTCCCAAGCTTGTCAGTGTAGTCTTTATTTGGTTTGTATAGTTTGAGAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| CDS-3UTR CCA 90 bp | GCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTTGGAAAGCTCCAATAAGATCTCTGTGATGCCGGCTTaGGACAGCGGGTATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: APILCAFPKPKLESSNKISVMPA*DSGYPR Trigger: TCTGGGATACCCGCTGTCCCAAGCCGGCATCACAGA...GATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR TCA 90 bp | TTTTTATTCATGTGCATACATGGAGACAACTTGCAGTCAAGAGTCCTTTTGCCACTGGGAGTGCACAGCTaGGCTGAGGGTACAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFMCIHGDNLQSRVLLPLGVHS*AEGTAC Trigger: GCAAGCTGTACCCTCAGCTCAGCTGTGCACTCCCAG...TGGCAAAAGGACTCTTGACTGCAAGTTGTCTCCATGTATGCACATGAATAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR TCA 90 bp | GAGATACCTAGAAAACTAGTAACACCTGTCATCACCCGAGACTACACAGATCTTGCACAACATGGTGGATaGCCTGATGGTCCCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EIPRKLVTPVITRDYTDLAQHGG*PDGPSQ Trigger: TTGGCTGGGACCATCAGGTCATCCACCATGTTGTGC...AAGATCTGTGTAGTCTCGGGTGATGACAGGTGTTACTAGTTTTCTAGGTATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CCA 90 bp | TTCACCCAGAAAATGGATTTGACTCAGTATAACAGGGACTTGTACAAAACTGTTAGCGACCACTCAGGCTaGAGACCCCGAGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTQKMDLTQYNRDLYKTVSDHSG*RPRAEG Trigger: CCCTTCTGCTCGGGGTCTCCAGCCTGAGTGGTCGCT...AACAGTTTTGTACAAGTCCCTGTTATACTGAGTCAAATCCATTTTCTGGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| CDS-3UTR CCA 90 bp | GGACGATCACATTCCTTCAGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGCTCACAAAGTCTCTGTaGGCTCGACTTCTAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: GRSHSFRAPILCAFPKPKLTKSL*ARLLNT Trigger: GGTGTTTAGAAGTCGAGCCCACAGAGACTTTGTGAG...CTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCTGAAGGAATGTGATCGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR TCA 90 bp | GTTGGACATCTGTGGCACGAATTAATCAATGTGGATTACTTTTACCAATACAGACGTGCAGCCTCCAATTaGCGTTCCATGCATGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLWHELINVDYFYQYRRAASN*RSMHAG Trigger: GCCCGCATGCATGGAACGTCAATTGGAGGCTGCACG...TCTGTATTGGTAAAAGTAATCCACATTGATTAATTCGTGCCACAGATGTCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| CDS-3UTR TCA 90 bp | TACATTCAGACTTCAGCTCTCCAGAGGAAGGTACCCAGATCAATTTTTAGGTGGGTAACCTGTCCAGCGTaGGCTCGGTATGAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIQTSALQRKVPRSIFRWVTCPA*ARYEFS Trigger: ACTGAATTCATACCGAGCTCACGCTGGACAGGTTAC...CCACCTAAAAATTGATCTGGGTACCTTCCTCTGGAGAGCTGAAGTCTGAATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR GCA 90 bp | ACACGTGTACTCACATACATCCATTTACAGAGGAAGTTTCTTCCTCTGAGTCACATCAGACCGGTACCGTaGAGCCTCCAATTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRVLTYIHLQRKFLPLSHIRPVP*SLQLTF Trigger: GAACGTCAATTGGAGGCTGCACGGTACCGGTCTGAT...GTGACTCAGAGGAAGAAACTTCCTCTGTAAATGGATGTATGTGAGTACACGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| 3UTR CAA 72 bp | AAACTGAGACAGGGGAGAAGGCATCCTGATGGCCACTaGAGGTTTAGGTCTTACTACCATTACAATCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRQGRRHPDGH*RFRSYYHYNPK Trigger: CTTGGGATTGTAATGGTAGTAAGACCTAAACCTCAAGTGGCCATCAGGATGCCTTCTCCCCTGTCTCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| CDS-3UTR TCA 90 bp | GAGATACCTAGAAAACTAGTAACACCTGTCATCACCCGAGACTACACAGATCTTCCAGGTCCCAAATTTTaGTGCAGCAGTCTTTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EIPRKLVTPVITRDYTDLPGPKF*CSSLCY Trigger: GTAGCAAAGACTGCTGCATCAAAATTTGGGACCTGG...AAGATCTGTGTAGTCTCGGGTGATGACAGGTGTTACTAGTTTTCTAGGTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR TCA 90 bp | ACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAACACTCCAGGTCCCAAATTTTaGTGCAGCAGTCTTTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TDGGLVLVFLKSILLHNTPGPKF*CSSLCY Trigger: GTAGCAAAGACTGCTGCATCAAAATTTGGGACCTGG...AGTGTTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128005.2 |
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| CDS-3UTR GCA 90 bp | TACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGTACCAATTGACGTTCCATaGATGCGGGCGCATTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YKTLCTVHIQYLFKIGAVPIDVP*MRAHWG Trigger: CCCCCAATGCGCCCGCATGCATGGAACGTCAATTGG...TACAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| CDS-3UTR CCA 90 bp | GCTTACAGACGGAGGGCTTGTTTTGGTTTTTCTGAAATCCATTCTACTCCACAATACAGCTTGCATTCTTaGTGTCCACAAGGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AYRRRACFGFSEIHSTPQYSLHS*CPQGRQ Trigger: CTGTCTCCCTTGTGGACACCAAGAATGCAAGCTGTA...TTGTGGAGTAGAATGGATTTCAGAAAAACCAAAACAAGCCCTCCGTCTGTAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128005.2 |
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| 3UTR CAA 72 bp | AGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGTaGGAAAGCTCCAATAAGATCAGTTACAGATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RAPILCAFPKPK*ESSNKISYRST Trigger: TGTGGATCTGTAACTGATCTTATTGGAGCTTTCCAACTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| CDS-3UTR CCA 90 bp | GTTGGACATCTGTGGCACGAATTAATCAATGTGGATTACTTTTACCAATACAGATACAGCTTGCATTCTTaGTGTCCACAAGGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VGHLWHELINVDYFYQYRYSLHS*CPQGRQ Trigger: CTGTCTCCCTTGTGGACACCAAGAATGCAAGCTGTA...TCTGTATTGGTAAAAGTAATCCACATTGATTAATTCGTGCCACAGATGTCCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| 3UTR CAA 72 bp | ATTCTAAAAACAGCAATGTTACGATGCTGTGTGAAGTaGATGACTTTTAGAAGGCCTCTTTCTGAATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILKTAMLRCCVK*MTFRRPLSEYP Trigger: AGGATATTCAGAAAGAGGCCTTCTAAAAGTCATCAACTTCACACAGCATCGTAACATTGCTGTTTTTAGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| CDS CCA 90 bp | ACCATCGTGCAGCCTCCAATTGACGTTCCATGCATGCGGGCGCATTaGGGGGCAGGTTCCACTCGCGGGCCGCCGGGGGCACGAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TIVQPPIDVPCMRAH*GAGSTRGPPGARAE Trigger: CTCCGCTCGTGCCCCCGGCGGCCCGCGAGTGGAACCTGCCCCCCAATGCGCCCGCATGCATGGAACGTCAATTGGAGGCTGCACGATGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| CDS-3UTR CAA 90 bp | GCCTGTTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTGCTACCACTGACAGCTaGTGTGCCAGAGCTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ACYCTGLGRKHALQGSCAATTDS*CARAQD Trigger: GTCCTGAGCTCTGGCACACAAGCTGTCAGTGGTAGC...AGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
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| CDS-3UTR CAA 90 bp | TACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCACAATCTGTGATGCCGGCTaGGGACAGCGGGTATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YCTGLGRKHALQGSCALTICDAG*GQRVSQ Trigger: CTGGGATACCCGCTGTCCCAAGCCGGCATCACAGAT...TGTGAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
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| CDS-3UTR CAA 90 bp | AAACATGCTCTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGCCGTGCAGCCTCCAATaGACGTTCCATGCATGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KHALQGSCALTHGRQGQSPCSLQ*TFHACG Trigger: CCCGCATGCATGGAACGTCAATTGGAGGCTGCACGG...CGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAGAGCATGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CAA 90 bp | GCCTGTTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTGTACAGCTTGCATTCTaGGTGTCCACAAGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ACYCTGLGRKHALQGSCAVQLAF*VSTRET Trigger: TGTCTCCCTTGTGGACACCAAGAATGCAAGCTGTAC...AGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
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| CDS-3UTR CAA 90 bp | CTACAAGGCTCCTGTGCTCTCACACATGGAAGGCAGGGGCAATCGAGTAGTCGCGCCAGGTCCCAAATTTaGATGCAGCAGTCTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LQGSCALTHGRQGQSSSRARSQI*MQQSLL Trigger: TAGCAAAGACTGCTGCATCAAAATTTGGGACCTGGC...GCGACTACTCGATTGCCCCTGCCTTCCATGTGTGAGAGCACAGGAGCCTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
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| CDS-3UTR CAA 90 bp | GGACGATCACATTCCTTCAGGGCGCCCATTTTATGTGCTTTTCCTAAACCCAAGGCCACTAGGATACCTTaGTCCCCCACCCAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRSHSFRAPILCAFPKPKATRIP*SPTQVR Trigger: CCTCACTTGGGTGGGGGACAAAGGTATCCTAGTGGC...CTTGGGTTTAGGAAAAGCACATAAAATGGGCGCCCTGAAGGAATGTGATCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CAA 90 bp | TGTTACTGCACGGGGCTAGGGAGGAAACATGCTCTACAAGGCTCCTGTGCTCTCTTGATGCAGCAGTCTTaGCTACCACTGACAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CYCTGLGRKHALQGSCALLMQQS*LPLTAC Trigger: ACAAGCTGTCAGTGGTAGCAAAGACTGCTGCATCAA...GAGAGCACAGGAGCCTTGTAGAGCATGTTTCCTCCCTAGCCCCGTGCAGTAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000128005.2 |
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| CDS-3UTR CAA 90 bp | AATTTTCTCCACTCCAAACTATATACCGCACTCACACGTGTACTCACATACATCATCTGTGATGCCGGCTaGGGACAGCGGGTATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NFLHSKLYTALTRVLTYIICDAG*GQRVSQ Trigger: CTGGGATACCCGCTGTCCCAAGCCGGCATCACAGAT...GATGTATGTGAGTACACGTGTGAGTGCGGTATATAGTTTGGAGTGGAGAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CAA 90 bp | AGGCCTCTTTCTGAATATCCTGTCCTTCCTTATGTATTGCAAAAAGATAGAGCCGCTACCACTGACAGCTaGTGTGCCAGAGCTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLSEYPVLPYVLQKDRAATTDS*CARAQD Trigger: GTCCTGAGCTCTGGCACACAAGCTGTCAGTGGTAGC...GGCTCTATCTTTTTGCAATACATAAGGAAGGACAGGATATTCAGAAAGAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CAA 90 bp | TACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGTATCGTGCAGCCTCCAATaGACGTTCCATGCATGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: YKTLCTVHIQYLFKIGAVSCSLQ*TFHACG Trigger: CCCGCATGCATGGAACGTCAATTGGAGGCTGCACGA...TACAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130994.8 |
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| CDS-3UTR CAA 90 bp | TACCTATCTTATGCCTTCCCTGAATTTAGTAACAATGCAAGTCCTTGCTTCCACTTGATGCAGCAGTCTTaGCTACCACTGACAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YLSYAFPEFSNNASPCFHLMQQS*LPLTAC Trigger: ACAAGCTGTCAGTGGTAGCAAAGACTGCTGCATCAA...GTGGAAGCAAGGACTTGCATTGTTACTAAATTCAGGGAAGGCATAAGATAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CAA 90 bp | CAAATCTTAGGAGTCCAAAAATACATTCAGACTTCAGCTCTCCAGAGGAAGGTAGCCAGGTCCCAAATTTaGATGCAGCAGTCTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QILGVQKYIQTSALQRKVARSQI*MQQSLL Trigger: TAGCAAAGACTGCTGCATCAAAATTTGGGACCTGGC...TACCTTCCTCTGGAGAGCTGAAGTCTGAATGTATTTTTGGACTCCTAAGATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CAA 90 bp | TTTTTATTCATGTGCATACATGGAGACAACTTGCAGTCAAGAGTCCTTTTGCCAGTACAGCTTGCATTCTaGGTGTCCACAAGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FLFMCIHGDNLQSRVLLPVQLAF*VSTRET Trigger: TGTCTCCCTTGTGGACACCAAGAATGCAAGCTGTAC...TGGCAAAAGGACTCTTGACTGCAAGTTGTCTCCATGTATGCACATGAATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS-3UTR CAA 90 bp | AATACAAGACATTATGCACTGTCCACATACAATACCTTTTTAAAATCGGAGCTGGCCGCACTAGGATCCTaGAAAAACCACAGAGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: NTRHYALSTYNTFLKSELAALGS*KNHREP Trigger: AGGTTCTCTGTGGTTTTTCAAGGATCCTAGTGCGGC...CAGCTCCGATTTTAAAAAGGTATTGTATGTGGACAGTGCATAATGTCTTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS CCA 72 bp | CAGCCTCCAATTGACGTTCCATGCATGCGGGCGCATTaGGGGGCAGGTTCCACTCGCGGGCCGCCGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QPPIDVPCMRAH*GAGSTRGPPGA Trigger: TGCCCCCGGCGGCCCGCGAGTGGAACCTGCCCCCCAATGCGCCCGCATGCATGGAACGTCAATTGGAGGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000010278.12 ENSMUST00000130994.8 |
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| CDS GCA 72 bp | GACCCCGAGCAGAAGGGAACCATCAGACCGGTACCGTaGAGCCTCCAATTGACGTTCCATGCATGCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DPEQKGTIRPVP*SLQLTFHACGR Trigger: GCGCCCGCATGCATGGAACGTCAATTGGAGGCTGCACGGTACCGGTCTGATGGTTCCCTTCTGCTCGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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| CDS CAA 72 bp | GCCTCGGTCTGGACGCCAGCAGAGCAGAAACCTTCGTaGGGGGCCGCACTAGGATCCTTGAAAAACCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASVWTPAEQKPS*GAALGSLKNHR Trigger: TCTGTGGTTTTTCAAGGATCCTAGTGCGGCCCCCAACGAAGGTTTCTGCTCTGCTGGCGTCCAGACCGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010278.12 |
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