Pregenerated sensors for WDR76 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027242Ensembl transcript IDs: ENSMUST00000028676.12, ENSMUST00000099473.10, ENSMUST00000110602.9, ENSMUST00000110603.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTaGCTACAGAATCTGAGGCTAGCCTGTGCTACACAAGATCCTAAC | + |
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Preference number: 1 (lower is better) Translates to: STQEVGAGGSVLGHP*LQNLRLACATQDPN Trigger: GTTAGGATCTTGTGTAGCACAGGCTAGCCTCAGATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR GCA 90 bp | ATCTTCTTAGTGTGGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTaGTGGGAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: IFLVWVISSGCVLKL*WEGRGGSVPQLAEH Trigger: ATGCTCTGCCAACTGAGGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCCACACTAAGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR CCA 90 bp | TCCCAGAATTCCAAATGTCACGCATTTGCAGAAACTGTCTGCAGCTaGCACAACCACACCCCTGCTACAGCATGGGGCAAATCACAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SQNSKCHAFAETVCS*HNHTPATAWGKSQS Trigger: TGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGGAATTCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR CCA 90 bp | TTCTTAGTGTGGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGCTaGGAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGCATTTA | + |
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Preference number: 1 (lower is better) Translates to: FLVWVISSGCVLKLC*EGRGGSVPQLAEHL Trigger: TAAATGCTCTGCCAACTGAGGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCCACACTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR GCA 90 bp | ATCCCTGAGTTTGATCCTCAGGACAGCATAAGCCAGTCACCATGGTaGATACCTATAGATTCAGAGCATTTGGGAAATGGAGGCAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: IPEFDPQDSISQSPW*IPIDSEHLGNGGKG Trigger: CCCCTTGCCTCCATTTCCCAAATGCTCTGAATCTATAGGTATGCACCATGGTGACTGGCTTATGCTGTCCTGAGGATCAAACTCAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR GCA 90 bp | TATATAACCTCTGAAAAGTTCCCAGAATTCCAAATGTCACGCATTTaGAGAAACTGTCTGCAGCTGGCACAACCACACCCCTGCTACAGC | + |
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Preference number: 1 (lower is better) Translates to: YITSEKFPEFQMSRI*RNCLQLAQPHPCYS Trigger: GCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGGAATTCTGGGAACTTTTCAGAGGTTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR TCA 90 bp | GCCTGTGCTACACAAGATCCTAACTCAAAACAATCAAAAAGTACATaGAAACACCCGTTTCTGCTCCAGGTCTCTCCCTCATCCTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: ACATQDPNSKQSKST*KHPFLLQVSPSSSR Trigger: TCTAGAGGATGAGGGAGAGACCTGGAGCAGAAACGGGTGTTTTCATGTACTTTTTGATTGTTTTGAGTTAGGATCTTGTGTAGCACAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR GCA 90 bp | TTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATaGACATTGAGCAAGCTCCAAATAGTCTCAGACAGCATCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: FCSFSAMLEIKHRNA*TLSKLQIVSDSICF Trigger: GAAGCAGATGCTGTCTGAGACTATTTGGAGCTTGCTCAATGTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR GCA 90 bp | AATGCATGCACATTGAGCAAGCTCCAAATAGTCTCAGACAGCATCTaGTTCATCTTCTTAGTGTGGGTAATCTCTTCAGGATGTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: NACTLSKLQIVSDSI*FIFLVWVISSGCVL Trigger: TAACACACATCCTGAAGAGATTACCCACACTAAGAAGATGAAGCAGATGCTGTCTGAGACTATTTGGAGCTTGCTCAATGTGCATGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGAAGGGCAGCCACCGACCATTGAGCCATCTCTCCAGCCTCTGCATACCGTGTTAAAGCTGTGCTaGGAGGGCAGAGGTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: PLEGQPPTIEPSLQPLHTVLKLC*EGRGGS Trigger: ACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACAC...GGTATGCAGAGGCTGGAGAGATGGCTCAATGGTCGGTGGCTGCCCTTCCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTCACGCATTTGCAGAAACTGTCTGCAGCTGGCACAACCACACCCCTGCTACGCCCATTTCAGGAGCTaGCCAGAGGCAGGGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: MSRICRNCLQLAQPHPCYAHFRS*PEAGDR Trigger: TCTGTCCCCTGCCTCTGGGCAGCTCCTGAAATGGGC...GTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTCATCTGGAGCCCAGTCTGTACAGCTAGTCACTAGAAAACAAGATAATGGCGTACTGGAACGTGCCTaGGACATTAGCACTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSSGAQSVQLVTRKQDNGVLERA*DISTQE Trigger: CTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTAC...GCCATTATCTTGTTTTCTAGTGACTAGCTGTACAGACTGGGCTCCAGATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAGCTGGCACAACCACACCCCTGCTACAGCATGGGGCAAATCACAGTCACAAAAGTGTTGAAAGATaGCAAGTGTACTGGAACGTG | + |
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Preference number: 2 (lower is better) Translates to: SAAGTTTPLLQHGANHSHKSVER*QVYWNV Trigger: CACGTTCCAGTACACTTGGCATCTTTCAACACTTTT...GTGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTGGCTACAGAATCAATCAAAAAGTACATaGAAACACCCGTTTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TQEVGAGGSVLGHPWLQNQSKST*KHPFLL Trigger: GAGCAGAAACGGGTGTTTTCATGTACTTTTTGATTG...ATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCACGCATTTGCAGAAACTGTCTGCAGCTGGCACAACCACACCCCTGCTACGACCTAGTCCAGTGTTaGGAAATAATTATTCACCCC | + |
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Preference number: 2 (lower is better) Translates to: MSRICRNCLQLAQPHPCYDLVQC*EIIIHP Trigger: GGGGTGAATAATTATTTCTCAACACTGGACTAGGTC...GTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGCAGCTGGCACAACCACACCCCTGCTACAGCATGGGGCAAATCACAGTCACGCATGTGACAGTCTCTaGGATTCAATAATGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SAAGTTTPLLQHGANHSHACDSL*DSIMFH Trigger: ATGAAACATTATTGAATCCCAGAGACTGTCACATGC...GTGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGCATACCAATTTTTCATGTGGGTCCTAGGGATTGAACTCAGGTCTTCAATCTGGGGCAGAGGTTaGAGGATCACCAATCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: ASAYQFFMWVLGIELRSSIWGRG*RITNQF Trigger: GAACTGATTGGTGATCCTCCAACCTCTGCCCCAGAT...TGAAGACCTGAGTTCAATCCCTAGGACCCACATGAAAAATTGGTATGCAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR CCA 90 bp | TTTACTTTGTGTGCTCTATTAATCTGGGGAGAAGGGAAGGTGAGCCACATTGGCTACAAACCCCTCATCTaGAGCCCAGTCTGTACAGCT | + |
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Preference number: 2 (lower is better) Translates to: FTLCALLIWGEGKVSHIGYKPLI*SPVCTA Trigger: AGCTGTACAGACTGGGCTCCAGATGAGGGGTTTGTA...GCCAATGTGGCTCACCTTCCCTTCTCCCCAGATTAATAGAGCACACAAAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR CAA 90 bp | AGCATAAGCCAGTCACCATGGTGCATACCTATAGATTCAGAGCATTaGGGAAATGGAGGCAAGGGGCTCAAAAGTTCAAGGTTATTCGTG | + |
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Preference number: 2 (lower is better) Translates to: SISQSPWCIPIDSEH*GNGGKGLKSSRLFV Trigger: CACGAATAACCTTGAACTTTTGAGCCCCTTGCCTCCATTTCCCAAATGCTCTGAATCTATAGGTATGCACCATGGTGACTGGCTTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR TCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAACAGATGCACTAAGCTaGGTCTCTAGGTTCCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: KWPSSSSLANITFCVEVSTDALS*VSRFPS Trigger: GCTAGGGAACCTAGAGACTCAGCTTAGTGCATCTGT...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR-3UTR TCA 90 bp | AGAATTCCAAATGTCACGCATTTGCAGAAACTGTCTGCAGCTGGCACAACCACATACTTGTCTAGCATGTaGCAGTCTCTGGGATTCAAT | + |
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Preference number: 2 (lower is better) Translates to: RIPNVTHLQKLSAAGTTTYLSSM*QSLGFN Trigger: ATTGAATCCCAGAGACTGTCACATGCTAGACAAGTA...TGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGGAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR CCA 90 bp | TTTACTTTGTGTGCTCTATTAATCTGGGGAGAAGGGAAGGTGAGCCACATTGGCTATAAAACTAAGTTCTaGCTGGGCATGGTAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: FTLCALLIWGEGKVSHIGYKTKF*LGMVVH Trigger: GTGTACTACCATGCCCAGCCAGAACTTAGTTTTATA...GCCAATGTGGCTCACCTTCCCTTCTCCCCAGATTAATAGAGCACACAAAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACACAGATGCACTAAGCTaGGTCTCTAGGTTCCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: CGGLTEKAVLYLLNITRDTDALS*VSRFPS Trigger: GCTAGGGAACCTAGAGACTCAGCTTAGTGCATCTGT...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCTATATTCCCAGCACTTGGAAAAGTGAGGCAGAAGGACTAAGTTCAAAGCAATCAAAAAGTACATaGAAACACCCGTTTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: HTYIPSTWKSEAEGLSSKQSKST*KHPFLL Trigger: GAGCAGAAACGGGTGTTTTCATGTACTTTTTGATTG...CTTTGAACTTAGTCCTTCTGCCTCACTTTTCCAAGTGCTGGGAATATAGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTACTAAATATAACACGTaGCCAAACAGATGCACTAAG | + |
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Preference number: 2 (lower is better) Translates to: SSLANITFCVEVSLRKQCTKYNT*PNRCTK Trigger: CTTAGTGCATCTGTTTGGTCACGTGTTATATTTAGT...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCTATATTCCCAGCACTTGGAAAAGTGAGGCAGAAGGACTAAGTTCAAAGACTAAATATAACACGTaGCCAAACAGATGCACTAAG | + |
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Preference number: 2 (lower is better) Translates to: HTYIPSTWKSEAEGLSSKTKYNT*PNRCTK Trigger: CTTAGTGCATCTGTTTGGTCACGTGTTATATTTAGT...CTTTGAACTTAGTCCTTCTGCCTCACTTTTCCAAGTGCTGGGAATATAGGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACGTGTGGAGGTCTCACTaGGAAAGCAGTGTTATATTT | + |
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Preference number: 2 (lower is better) Translates to: FAKYSLIKSVERCQVYWNVWRSH*ESSVIF Trigger: AAATATAACACTGCTTTCTCAGTGAGACCTCCACAC...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR GCA 72 bp | TGCAGAAACTGTCTGCAGCTGGCACAACCACACCCCTaGTACAGCATGGGGCAAATCACAGTCACCTGCCGC | + |
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Preference number: 3 (lower is better) Translates to: CRNCLQLAQPHP*YSMGQITVTCR Trigger: GCGGCAGGTGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR CCA 72 bp | GTCTGCAGCTGGCACAACCACACCCCTGCTACAGCATaGGGCAAATCACAGTCACCTGCCGCGGACAATATG | + |
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Preference number: 3 (lower is better) Translates to: VCSWHNHTPATA*GKSQSPAADNM Trigger: CATATTGTCCGCGGCAGGTGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR CCA 72 bp | TGGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGCTaGGAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: WVISSGCVLKLC*EGRGGSVPQLA Trigger: TGCCAACTGAGGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTAAAGCTGTGCTGGGAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAATAGATTCAGAGCATTaGGGAAATGGAGGCAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: CVKAVLGGQRWECPSVGRIDSEH*GNGGKG Trigger: CCCCTTGCCTCCATTTCCCAAATGCTCTGAATCTAT...TCTGCCAACTGAGGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR GCA 72 bp | CAGAATTCCAAATGTCACGCATTTGCAGAAACTGTCTaGAGCTGGCACAACCACACCCCTGCTACAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: QNSKCHAFAETV*SWHNHTPATAW Trigger: CCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGGAATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR CCA 72 bp | ATGGTGGCACATGCCCATACTATAGTCGCAGACATCTaGGGCAGAGGTTGGAGGATCACCAATCAGTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: MVAHAHTIVADI*GRGWRITNQFK Trigger: CTTGAACTGATTGGTGATCCTCCAACCTCTGCCCCAGATGTCTGCGACTATAGTATGGGCATGTGCCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR CAA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGCTTCAAGTTCCTCCCTaGCTAATATTACATTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: CQVYWNVPETLALRRSGQLQVPP*LILHSV Trigger: CACAGAATGTAATATTAGCAAGGGAGGAACTTGAAG...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTGCATACCAATTTTTCATGTGGGTCCTAGGGATTGAACTCAGGTCTTCACATCTGGGGCAGAGGTaGGAGGATCACCAATCAGTT | + |
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Preference number: 3 (lower is better) Translates to: ASAYQFFMWVLGIELRSSHLGQR*EDHQSV Trigger: AACTGATTGGTGATCCTCCAACCTCTGCCCCAGATG...TGAAGACCTGAGTTCAATCCCTAGGACCCACATGAAAAATTGGTATGCAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR GCA 72 bp | TCTGAAAAGTTCCCAGAATTCCAAATGTCACGCATTTaGAGAAACTGTCTGCAGCTGGCACAACCACACCCC | + |
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Preference number: 3 (lower is better) Translates to: SEKFPEFQMSRI*RNCLQLAQPHP Trigger: GGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGGAATTCTGGGAACTTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR-3UTR CAA 90 bp | AGCCACCGACCATTGAGCCATCTCTCCAGCCTCTGCATACCAATTTTTCATGTGTCCTTTTCTGCCATGTaGGAAATCAAGCACAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: SHRPLSHLSSLCIPIFHVSFSAM*EIKHRN Trigger: ATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGA...CACATGAAAAATTGGTATGCAGAGGCTGGAGAGATGGCTCAATGGTCGGTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR TCA 72 bp | GGTAGTACACACCTATATTCCCAGCACTTGGAAAAGTaGGGCAGAAGGACTAAGTTCAAAGCTAACCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GSTHLYSQHLEK*GRRTKFKANLG Trigger: GCCCAGGTTAGCTTTGAACTTAGTCCTTCTGCCTCACTTTTCCAAGTGCTGGGAATATAGGTGTGTACTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 |
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| 3UTR CCA 72 bp | AGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTaGAACGTGCCTGAGACATTAGCACTCAGGAGGTCG | + |
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Preference number: 3 (lower is better) Translates to: SLIKSVERCQVY*NVPETLALRRS Trigger: CGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| 3UTR CCA 72 bp | CTGGGCATGGTAGTACACACCTATATTCCCAGCACTTaGAAAAGTGAGGCAGAAGGACTAAGTTCAAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: LGMVVHTYIPST*KSEAEGLSSKL Trigger: TAGCTTTGAACTTAGTCCTTCTGCCTCACTTTTCCAAGTGCTGGGAATATAGGTGTGTACTACCATGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 |
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| 3UTR GCA 72 bp | TTTGATCCTCAGGACAGCATAAGCCAGTCACCATGGTaGATACCTATAGATTCAGAGCATTTGGGAAATGGA | + |
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Preference number: 3 (lower is better) Translates to: FDPQDSISQSPW*IPIDSEHLGNG Trigger: TCCATTTCCCAAATGCTCTGAATCTATAGGTATGCACCATGGTGACTGGCTTATGCTGTCCTGAGGATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR GCA 72 bp | TTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATaGACATTGAGCAAGCTCCAAATAGTCTCAGACAGC | + |
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Preference number: 3 (lower is better) Translates to: FSAMLEIKHRNA*TLSKLQIVSDS Trigger: GCTGTCTGAGACTATTTGGAGCTTGCTCAATGTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR CAA 90 bp | AGAATTCCAAATGTCACGCATTTGCAGAAACTGTCTGCAGCTGGCACAACCACACTTCAAGTTCCTCCCTaGCTAATATTACATTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RIPNVTHLQKLSAAGTTTLQVPP*LILHSV Trigger: CACAGAATGTAATATTAGCAAGGGAGGAACTTGAAG...TGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGGAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| 3UTR GCA 72 bp | TTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATaGATGCACATTGAGCAAGCTCCAAATAGTCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: FLFCHVGNQAQE*MHIEQAPNSLR Trigger: TCTGAGACTATTTGGAGCTTGCTCAATGTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR CCA 72 bp | ATAGTCTCAGACAGCATCTGCTTCATCTTCTTAGTGTaGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: IVSDSICFIFLV*VISSGCVLKLC Trigger: GCACAGCTTTAACACACATCCTGAAGAGATTACCCACACTAAGAAGATGAAGCAGATGCTGTCTGAGACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| 3UTR-3UTR CAA 90 bp | AAAAGAATTAGACTGGATAGAAGTGGTACCCAACACTGGGACTCAATTTTTATTCCAAATGTCACGCATTaGCAGAAACTGTCTGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: KRIRLDRSGTQHWDSIFIPNVTH*QKLSAA Trigger: AGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGG...AATAAAAATTGAGTCCCAGTGTTGGGTACCACTTCTATCCAGTCTAATTCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| CDS-3UTR CCA 90 bp | TCTGCAGCTGGCACAACCACACCCCTGCTACAGCATGGGGCAAATCACAGTCACGAGGCTGGCTTCCCCTaGACTTCAGGAACCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAAGTTTPLLQHGANHSHEAGFP*TSGTWH Trigger: ATGCCAGGTTCCTGAAGTCCAGGGGAAGCCAGCCTC...GTGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGTCCACCCGTCGTGGGTaGTCCATGCTACCAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: CQVYWNVPETLALRRSGQSTRRG*SMLPTM Trigger: CATAGTTGGTAGCATGGACCACCCACGACGGGTGGA...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGCATTTACCAGGATGCATAAACTCAGGGACAGTAGATaGGCTGGGTTGGTGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQRWECPSVGRAFTRMHKLRDSR*AGLVGE Trigger: CTCACCCACCAACCCAGCCCATCTACTGTCCCTGAG...TTTATGCATCCTGGTAAATGCTCTGCCAACTGAGGGACACTCCCACCTCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGGAAGCTGGGAAGATATaGAGCTGCTGTCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: CQVYWNVPETLALRRSGQEAGKI*SCCQRP Trigger: GGGTCTTTGACAGCAGCTCCATATCTTCCCAGCTTC...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGCATTTACCAGGATGTCTTGGGTCCCAGCCTaGTACTTTCAGTATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGGQRWECPSVGRAFTRMSWVPA*YFQYKH Trigger: ATGCTTATACTGAAAGTACCAGGCTGGGACCCAAGA...CATCCTGGTAAATGCTCTGCCAACTGAGGGACACTCCCACCTCTGCCCTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGGCATCTTCACTCTGCTaGGTCAAATCCCAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQVYWNVPETLALRRSGQASSLC*VKSQSP Trigger: TGGACTTTGGGATTTGACCCAGCAGAGTGAAGATGC...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGCATGTAACTTGCCACTaGAATTACCTCCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CQVYWNVPETLALRRSGQHVTCH*NYLQPG Trigger: TCCTGGCTGGAGGTAATTCCAGTGGCAAGTTACATG...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGATAAGCATCCACGGATaGTTTCAGCAGAAGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CQVYWNVPETLALRRSGQISIHG*FQQKGI Trigger: GATTCCCTTCTGCTGAAATCATCCGTGGATGCTTAT...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGTCTTGGGTCCCAGCCTaGTACTTTCAGTATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQVYWNVPETLALRRSGQSWVPA*YFQYKH Trigger: ATGCTTATACTGAAAGTACCAGGCTGGGACCCAAGA...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCACTCAGGGAGGCAGAGACAGGTGACACAGTAAATTCCAGGAGAGTCAGGGCATCTTCACTCTGCTaGGTCAAATCCCAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PALREAETGDTVNSRRVRASSLC*VKSQSP Trigger: TGGACTTTGGGATTTGACCCAGCAGAGTGAAGATGC...CCTGACTCTCCTGGAATTTACTGTGTCACCTGTCTCTGCCTCCCTGAGTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTGGCTACAGAATATCGCATCTTCACTCTaGTGGGTCAAATCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQEVGAGGSVLGHPWLQNIASSL*WVKSQS Trigger: ACTTTGGGATTTGACCCAGCAGAGTGAAGATGCGAT...ATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGAAATCAAGCACAGGAATGCATGCACATTGAGCAAGCTCCAAATAGTCCAGGGAGGGGCAGCATaGAACACCCACCAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLEIKHRNACTLSKLQIVQGGAA*NTHQQA Trigger: AGCCTGCTGGTGGGTGTTGCATGCTGCCCCTCCCTG...GACTATTTGGAGCTTGCTCAATGTGCATGCATTCCTGTGCTTGATTTCCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTGGCTACAGAATTCTTGGGTCCCAGCCTaGTACTTTCAGTATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQEVGAGGSVLGHPWLQNSWVPA*YFQYKH Trigger: ATGCTTATACTGAAAGTACCAGGCTGGGACCCAAGA...ATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCACGCATTTGCAGAAACTGTCTGCAGCTGGCACAACCACACCCCTGCTACGCATCTTCACTCTGCTaGGTCAAATCCCAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSRICRNCLQLAQPHPCYASSLC*VKSQSP Trigger: TGGACTTTGGGATTTGACCCAGCAGAGTGAAGATGC...GTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTGGGTCCCACACAGCCTaGAACCTCGTTAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLANITFCVEVSLRKQCGSHTA*NLVSHL Trigger: GAGGTGGCTAACGAGGTTCCAGGCTGTGTGGGACCC...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| 3UTR CAA 72 bp | CAGGTGTGGGATATGTCCACAGCAGCTGACTATGATTaGCATTGTGCTCTAGCAGAGCCGTGGTTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVWDMSTAADYD*HCALAEPWFCQ Trigger: CTGGCAAAACCACGGCTCTGCTAGAGCACAATGCAAATCATAGTCAGCTGCTGTGGACATATCCCACACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR TCA 90 bp | GGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGCATTTACCAGGATGCATAAAATAAGCATCCACGGATaGTTTCAGCAGAAGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GQRWECPSVGRAFTRMHKISIHG*FQQKGI Trigger: GATTCCCTTCTGCTGAAATCATCCGTGGATGCTTAT...TTTATGCATCCTGGTAAATGCTCTGCCAACTGAGGGACACTCCCACCTCTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR GCA 90 bp | ATGTCACGCATTTGCAGAAACTGTCTGCAGCTGGCACAACCACACCCCTGCTACATCGCATCTTCACTCTaGTGGGTCAAATCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSRICRNCLQLAQPHPCYIASSL*WVKSQS Trigger: ACTTTGGGATTTGACCCAGCAGAGTGAAGATGCGAT...GTAGCAGGGGTGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR GCA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGTTATATTCATTCACCTaGACAAGGGGACACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQVYWNVPETLALRRSGQLYSFT*TRGHCL Trigger: CAAACAGTGTCCCCTTGTGCAGGTGAATGAATATAA...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGCTGGCACAACCACACCCCTGCTACAGCATGGGGCAAATCACAGTCATCACTGCTGTCATCTTaGTTTTCAGGAATCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCSWHNHTPATAWGKSQSSLLSS*FSGIIS Trigger: AGAAATGATTCCTGAAAACCAAGATGACAGCAGTGA...TGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR CCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTCAGGGACAGTAGATaGGCTGGGTTGGTGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSLRDSR*AGLVGE Trigger: CTCACCCACCAACCCAGCCCATCTACTGTCCCTGAG...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTCAATTTGTCCAGACTTaGCCCCAGCTGCTACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLANITFCVEVSLRKQCQFVQT*PQLLPR Trigger: CCTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTG...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTCTGAGGAGAGGAAGCTaGGAAGATATGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLANITFCVEVSLRKQCLRRGS*EDMELL Trigger: CAGCAGCTCCATATCTTCCCAGCTTCCTCTCCTCAG...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTCCAGTGACAGTGTTGTaGCTGATGGTACTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLANITFCVEVSLRKQCPVTVL*LMVLRR Trigger: TCTCCTCAGTACCATCAGGCACAACACTGTCACTGG...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATAGTCTCAGACAGCATCTGCTTCATCTTCTTAGTGTGGGTAATCTCTTCCAATTTGTCCAGACTTaGCCCCAGCTGCTACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNSLRQHLLHLLSVGNLFQFVQT*PQLLPR Trigger: CCTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTG...GAAGAGATTACCCACACTAAGAAGATGAAGCAGATGCTGTCTGAGACTATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTGAAGCTGGGAAGATATaGAGCTGCTGTCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLANITFCVEVSLRKQCEAGKI*SCCQRP Trigger: GGGTCTTTGACAGCAGCTCCATATCTTCCCAGCTTC...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGGAGAGGAAGCTaGGAAGATATGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSLRRGS*EDMELL Trigger: CAGCAGCTCCATATCTTCCCAGCTTCCTCTCCTCAG...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTGTGTGCTCTATTAATCTGGGGAGAAGGGAAGGTGAGCCACATTGGCCATGTAACTTGCCACTaGAATTACCTCCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FTLCALLIWGEGKVSHIGHVTCH*NYLQPG Trigger: TCCTGGCTGGAGGTAATTCCAGTGGCAAGTTACATG...GCCAATGTGGCTCACCTTCCCTTCTCCCCAGATTAATAGAGCACACAAAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| 3UTR CAA 72 bp | GCCATGTTGGAAATCAAGCACAGGAATGCATGCACATaGAGCAAGCTCCAAATAGTCTCAGACAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AMLEIKHRNACT*SKLQIVSDSIC Trigger: GCAGATGCTGTCTGAGACTATTTGGAGCTTGCTCAATGTGCATGCATTCCTGTGCTTGATTTCCAACATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTGTGTGCTCTATTAATCTGGGGAGAAGGGAAGGTGAGCCACATTGGCATAAGCATCCACGGATaGTTTCAGCAGAAGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: FTLCALLIWGEGKVSHIGISIHG*FQQKGI Trigger: GATTCCCTTCTGCTGAAATCATCCGTGGATGCTTAT...GCCAATGTGGCTCACCTTCCCTTCTCCCCAGATTAATAGAGCACACAAAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR TCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACCGTCTATCTACCAGTaGCAAATGTCCATCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSPSIYQ*QMSIPV Trigger: CACTGGGATGGACATTTGTCACTGGTAGATAGACGG...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACGAGGCTGGCTTCCCCTaGACTTCAGGAACCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGGLTEKAVLYLLNITRDEAGFP*TSGTWH Trigger: ATGCCAGGTTCCTGAAGTCCAGGGGAAGCCAGCCTC...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAGAAGCTGGGAAGATATaGAGCTGCTGTCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSEAGKI*SCCQRP Trigger: GGGTCTTTGACAGCAGCTCCATATCTTCCCAGCTTC...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTAAATTCCACCTTAGGGCTGTAGCTGGTCTTTACTACTTTGTGGATTTTGGGTCCCACACAGCCTaGAACCTCGTTAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: YFKFHLRAVAGLYYFVDFGSHTA*NLVSHL Trigger: GAGGTGGCTAACGAGGTTCCAGGCTGTGTGGGACCC...AAAATCCACAAAGTAGTAAAGACCAGCTACAGCCCTAAGGTGGAATTTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACCAAGGTTCTCACTTCTaGTGGGTGGAGGGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNQGSHF*WVEGHG Trigger: TCCGTGGCCCTCCACCCATCAGAAGTGAGAACCTTG...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTAACGGGGGAGAAATATaGAGAGGCAATGCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLANITFCVEVSLRKQCNGGEI*RGNAFR Trigger: TCGAAAAGCATTGCCTCTGCATATTTCTCCCCCGTT...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAACACTGTTTGGAGCCTaGCTTTTCCTCAGATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSTLFGA*LFLRFS Trigger: GCTGAATCTGAGGAAAAGGCAGGCTCCAAACAGTGT...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAGCATCTTCACTCTGCTaGGTCAAATCCCAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSASSLC*VKSQSP Trigger: TGGACTTTGGGATTTGACCCAGCAGAGTGAAGATGC...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACCTCAGGGACAGTAGATaGGCTGGGTTGGTGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNLRDSR*AGLVGE Trigger: CTCACCCACCAACCCAGCCCATCTACTGTCCCTGAG...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACGAGGCTGGCTTCCCCTaGACTTCAGGAACCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNEAGFP*TSGTWH Trigger: ATGCCAGGTTCCTGAAGTCCAGGGGAAGCCAGCCTC...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAATAAGCATCCACGGATaGTTTCAGCAGAAGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSISIHG*FQQKGI Trigger: GATTCCCTTCTGCTGAAATCATCCGTGGATGCTTAT...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | AGAATTCCAAATGTCACGCATTTGCAGAAACTGTCTGCAGCTGGCACAACCACACTTTCAACAGTTCACTaGTGTCATCTTGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RIPNVTHLQKLSAAGTTTLSTVH*CHLGFQ Trigger: CTGAAAACCAAGATGACAGCAGTGAACTGTTGAAAG...TGTGGTTGTGCCAGCTGCAGACAGTTTCTGCAAATGCGTGACATTTGGAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGAAATCAAGCACAGGAATGCATGCACATTGAGCAAGCTCCAAATAGTCATCGCATCTTCACTCTaGTGGGTCAAATCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLEIKHRNACTLSKLQIVIASSL*WVKSQS Trigger: ACTTTGGGATTTGACCCAGCAGAGTGAAGATGCGAT...GACTATTTGGAGCTTGCTCAATGTGCATGCATTCCTGTGCTTGATTTCCAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR GCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAAACGGGGGAGAAATATaGAGAGGCAATGCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSNGGEI*RGNAFR Trigger: TCGAAAAGCATTGCCTCTGCATATTTCTCCCCCGTT...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACAATCCGAGGTCCTCTTaGGTCCCAGCCTGGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CGGLTEKAVLYLLNITRDNPRSS*VPAWYF Trigger: AAAGTACCAGGCTGGGACCCAAGAGGACCTCGGATT...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACCAATTTGTCCAGACTTaGCCCCAGCTGCTACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGGLTEKAVLYLLNITRDQFVQT*PQLLPR Trigger: CCTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTG...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGTTTGGTTGGTTACTGTTTGTTAATAGTCATGATCAAAGAAGAAACAAAATCCACCCGTCGTGGGTaGTCCATGCTACCAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: GGLVGYCLLIVMIKEETKSTRRG*SMLPTM Trigger: CATAGTTGGTAGCATGGACCACCCACGACGGGTGGA...TTTTGTTTCTTCTTTGATCATGACTATTAACAAACAGTAACCAACCAAACCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACTCCACCCGTCGTGGGTaGTCCATGCTACCAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNSTRRG*SMLPTM Trigger: CATAGTTGGTAGCATGGACCACCCACGACGGGTGGA...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGAAATCAAGCACAGGAATGCATGCACATTGAGCAAGCTCCAAATAGTCTCCTTTCAACAGTTCACTaGTGTCATCTTGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGNQAQECMHIEQAPNSLLSTVH*CHLGFQ Trigger: CTGAAAACCAAGATGACAGCAGTGAACTGTTGAAAG...GAGACTATTTGGAGCTTGCTCAATGTGCATGCATTCCTGTGCTTGATTTCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACCAATTTGTCCAGACTTaGCCCCAGCTGCTACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNQFVQT*PQLLPR Trigger: CCTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTG...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACCTGAGGAGAGGAAGCTaGGAAGATATGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNLRRGS*EDMELL Trigger: CAGCAGCTCCATATCTTCCCAGCTTCCTCTCCTCAG...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAGAAGGGAATCTGCCTTaGAAGATAAGGCCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSEGNLP*KIRPSF Trigger: AAATGAAGGCCTTATCTTCCAAGGCAGATTCCCTTC...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACCCGTCTATCTACCAGTaGCAAATGTCCATCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNPSIYQ*QMSIPV Trigger: CACTGGGATGGACATTTGTCACTGGTAGATAGACGG...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTTTCAACAGTTCACTaGTGTCATCTTGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSLSTVH*CHLGFQ Trigger: CTGAAAACCAAGATGACAGCAGTGAACTGTTGAAAG...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACCATGTCTTCAAAGATaGTTTCAACAGTTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KWPSSSSLANITFCVEVSPCLQR*FQQFTA Trigger: AGCAGTGAACTGTTGAAAGCATCTTTGAAGACATGG...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGTTTGGTTGGTTACTGTTTGTTAATAGTCATGATCAAAGAAGAAACAAAACCAGTGACAGTGTTGTaGCTGATGGTACTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGLVGYCLLIVMIKEETKPVTVL*LMVLRR Trigger: TCTCCTCAGTACCATCAGGCACAACACTGTCACTGG...TTTTGTTTCTTCTTTGATCATGACTATTAACAAACAGTAACCAACCAAACCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACCCAGTGACAGTGTTGTaGCTGATGGTACTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNPVTVL*LMVLRR Trigger: TCTCCTCAGTACCATCAGGCACAACACTGTCACTGG...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTTCACTGCTGTCATCTTaGTTTTCAGGAATCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLANITFCVEVSLRKQCSLLSS*FSGIIS Trigger: AGAAATGATTCCTGAAAACCAAGATGACAGCAGTGA...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACCATGTAACTTGCCACTaGAATTACCTCCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGGLTEKAVLYLLNITRDHVTCH*NYLQPG Trigger: TCCTGGCTGGAGGTAATTCCAGTGGCAAGTTACATG...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACATCGCATCTTCACTCTaGTGGGTCAAATCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGGLTEKAVLYLLNITRDIASSL*WVKSQS Trigger: ACTTTGGGATTTGACCCAGCAGAGTGAAGATGCGAT...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACAACGGGGGAGAAATATaGAGAGGCAATGCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CGGLTEKAVLYLLNITRDNGGEI*RGNAFR Trigger: TCGAAAAGCATTGCCTCTGCATATTTCTCCCCCGTT...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATAGTCTCAGACAGCATCTGCTTCATCTTCTTAGTGTGGGTAATCTCTTCTCACTGCTGTCATCTTaGTTTTCAGGAATCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNSLRQHLLHLLSVGNLFSLLSS*FSGIIS Trigger: AGAAATGATTCCTGAAAACCAAGATGACAGCAGTGA...GAAGAGATTACCCACACTAAGAAGATGAAGCAGATGCTGTCTGAGACTATTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACTCTTGGGTCCCAGCCTaGTACTTTCAGTATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNSWVPA*YFQYKH Trigger: ATGCTTATACTGAAAGTACCAGGCTGGGACCCAAGA...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACCTTTCAACAGTTCACTaGTGTCATCTTGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGGLTEKAVLYLLNITRDLSTVH*CHLGFQ Trigger: CTGAAAACCAAGATGACAGCAGTGAACTGTTGAAAG...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATACAGCCTAATTAAAAGTGTTGAAAGATGCCAAGTGTACTGGAACCGATCTTTCTTCTTATaGACCACTGATTTGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FAKYSLIKSVERCQVYWNRSFFL*TTDLLE Trigger: TTCTAGCAAATCAGTGGTCCATAAGAAGAAAGATCG...GTTCCAGTACACTTGGCATCTTTCAACACTTTTAATTAGGCTGTATTTTGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTTAAAGCTGTGCTGGGAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGAATCCGAGGTCCTCTaGGGTCCCAGCCTGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: CVKAVLGGQRWECPSVGRESEVL*GPSLVL Trigger: AAGTACCAGGCTGGGACCCAAGAGGACCTCGGATTC...TCTGCCAACTGAGGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CAA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGGAATCCGAGGTCCTCTaGGGTCCCAGCCTGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: CQVYWNVPETLALRRSGQESEVL*GPSLVL Trigger: AAGTACCAGGCTGGGACCCAAGAGGACCTCGGATTC...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTGGCTACAGAATGGGCCACGGAGGAGATaGCTCCTTTGGTCACCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: TQEVGAGGSVLGHPWLQNGPRRR*LLWSPY Trigger: GTAAGGTGACCAAAGGAGCAATCTCCTCCGTGGCCC...ATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGCCAATTTGTCCAGACTaGGCCCCAGCTGCTACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CQVYWNVPETLALRRSGQPICPD*APAATK Trigger: CTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTGG...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGCTCCCAGTGACAGTGTaGTGCCTGATGGTACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CQVYWNVPETLALRRSGQLPVTV*CLMVLR Trigger: CCTCAGTACCATCAGGCACAACACTGTCACTGGGAG...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS TCA 90 bp | TGCACTGTCTTCGTCGCTGCTTTCCGCGTCCACACTGAGAGTCGCTaGATCCGAGGTCCTCTTGGGTCCCAGCCTGGTACTTTCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: CTVFVAAFRVHTESR*IRGPLGSQPGTFSI Trigger: TATACTGAAAGTACCAGGCTGGGACCCAAGAGGACCTCGGATTCAGCGACTCTCAGTGTGGACGCGGAAAGCAGCGACGAAGACAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAGCTGGCACAACCACACCCCTGCTACAGCATGGGGCAAATCACAGTCAATCCCAAAGTCCAATTaGTCCAGACTTGGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VCSWHNHTPATAWGKSQSIPKSN*SRLGPS Trigger: GCTGGGGCCAAGTCTGGACAAATTGGACTTTGGGAT...TGACTGTGATTTGCCCCATGCTGTAGCAGGGGTGTGGTTGTGCCAGCTGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAAGTGTACTGGAACGTGCCTGAGACATTAGCACTCAGGAGGTCGGGGCAGACAAGGGGACACTGTTaGGAGCCTGCCTTTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CQVYWNVPETLALRRSGQTRGHC*EPAFSS Trigger: TGAGGAAAAGGCAGGCTCCAAACAGTGTCCCCTTGT...CTGCCCCGACCTCCTGAGTGCTAATGTCTCAGGCACGTTCCAGTACACTTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
||
| CDS TCA 90 bp | AATTTGTCCAGACTTGGCCCCAGCTGCTACCAAGGTTCTCACTTCTaGTGGGTGGAGGGCCACGGAGGAGATTGCTCCTTTGGTCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: NLSRLGPSCYQGSHF*WVEGHGGDCSFGHL Trigger: AAGGTGACCAAAGGAGCAATCTCCTCCGTGGCCCTCCACCCATCAGAAGTGAGAACCTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGCATTTACCAGGATGCATAATCCCAAAGTCCAATTaGTCCAGACTTGGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGRGGSVPQLAEHLPGCIIPKSN*SRLGPS Trigger: GCTGGGGCCAAGTCTGGACAAATTGGACTTTGGGAT...TATGCATCCTGGTAAATGCTCTGCCAACTGAGGGACACTCCCACCTCTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS CCA 90 bp | CTTCACTCTGCTGGGTCAAATCCCAAAGTCCAATTTGTCCAGACTTaGCCCCAGCTGCTACCAAGGTTCTCACTTCTGATGGGTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHSAGSNPKVQFVQT*PQLLPRFSLLMGGG Trigger: CCCTCCACCCATCAGAAGTGAGAACCTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTGGACTTTGGGATTTGACCCAGCAGAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CCA 90 bp | ACGGGCTGTTTCCCTCATTCCTGTACACCTCCTCAAACACAGCGCTaGAAAAATCACCACATCGCAGTGTGCCGTCATAGCTCAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TGCFPHSCTPPQTQR*KNHHIAVCRHSSGT Trigger: TGTCCCTGAGCTATGACGGCACACTGCGATGTGGTGATTTTTCCAGCGCTGTGTTTGAGGAGGTGTACAGGAATGAGGGAAACAGCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS GCA 90 bp | GCACTGAGGGAACACACAGATACAAGACATTCTCCCCAAAGAGAATaGACATTCTTTCCCGACTCGTGGAAGACTTCCACCCGTCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALREHTDTRHSPQRE*TFFPDSWKTSTRRG Trigger: CCCACGACGGGTGGAAGTCTTCCACGAGTCGGGAAAGAATGTGCATTCTCTTTGGGGAGAATGTCTTGTATCTGTGTGTTCCCTCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCTCTGCATACCAATTTTTCATGTGGGTCCTAGGGATTGAACTCAGGTCTGGGCCACGGAGGAGATaGCTCCTTTGGTCACCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PASAYQFFMWVLGIELRSGPRRR*LLWSPY Trigger: GTAAGGTGACCAAAGGAGCAATCTCCTCCGTGGCCC...AGACCTGAGTTCAATCCCTAGGACCCACATGAAAAATTGGTATGCAGAGGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS CCA 90 bp | CTACCAACTATGAAGCAATCTTCTTGTTTAGGGTCCCACACAGCCTaGAACCTCGTTAGCCACCTCCCAGTGACAGTGTTGTGCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPTMKQSSCLGSHTA*NLVSHLPVTVLCLM Trigger: CATCAGGCACAACACTGTCACTGGGAGGTGGCTAACGAGGTTCCAGGCTGTGTGGGACCCTAAACAAGAAGATTGCTTCATAGTTGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CCA 90 bp | TGCACATTCTTTCCCGACTCGTGGAAGACTTCCACCCGTCGTGGGTaGTCCATGCTACCAACTATGAAGCAATCTTCTTGTTTAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CTFFPDSWKTSTRRG*SMLPTMKQSSCLGS Trigger: GGACCCTAAACAAGAAGATTGCTTCATAGTTGGTAGCATGGACCACCCACGACGGGTGGAAGTCTTCCACGAGTCGGGAAAGAATGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CCA 90 bp | ACAAGACATTCTCCCCAAAGAGAATGCACATTCTTTCCCGACTCGTaGAAGACTTCCACCCGTCGTGGGTGGTCCATGCTACCAACTATG | + |
|
Preference number: 5 (lower is better) Translates to: TRHSPQRECTFFPDS*KTSTRRGWSMLPTM Trigger: CATAGTTGGTAGCATGGACCACCCACGACGGGTGGAAGTCTTCCACGAGTCGGGAAAGAATGTGCATTCTCTTTGGGGAGAATGTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCTCTGCATACCAATTTTTCATGTGGGTCCTAGGGATTGAACTCAGGTCTCCAATTTGTCCAGACTaGGCCCCAGCTGCTACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PASAYQFFMWVLGIELRSPICPD*APAATK Trigger: CTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTGG...AGACCTGAGTTCAATCCCTAGGACCCACATGAAAAATTGGTATGCAGAGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS CCA 90 bp | TATCTACCAGTGACAAATGTCCATCCCAGTGTCCCACTAGCAGACTaGAGGAATCGTTCAAGAAGTCAAAGGAGGACGGGCTGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLPVTNVHPSVPLAD*RNRSRSQRRTGCFP Trigger: AGGGAAACAGCCCGTCCTCCTTTGACTTCTTGAACGATTCCTCCAGTCTGCTAGTGGGACACTGGGATGGACATTTGTCACTGGTAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGGCAGAGGTGGGAGTGTCCCTTCACTGCTGTCATCTaGGTTTTCAGGAATCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFRMCVKAVLGGQRWECPFTAVI*VFRNHF Trigger: GAAATGATTCCTGAAAACCAAGATGACAGCAGTGAA...GGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACACATCCTGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CAA 90 bp | CACACCTATATTCCCAGCACTTGGAAAAGTGAGGCAGAAGGACTAAGTTCAAAGGGGCCACGGAGGAGATaGCTCCTTTGGTCACCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: HTYIPSTWKSEAEGLSSKGPRRR*LLWSPY Trigger: GTAAGGTGACCAAAGGAGCAATCTCCTCCGTGGCCC...CTTTGAACTTAGTCCTTCTGCCTCACTTTTCCAAGTGCTGGGAATATAGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTGGCTACAGAATTTAAGTAGGCCTAGCTaGGAATTGCTGAGTGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TQEVGAGGSVLGHPWLQNLSRPS*ELLSEN Trigger: GTTTTCACTCAGCAATTCCAAGCTAGGCCTACTTAA...ATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
||
| CDS GCA 90 bp | AACTTGCCACTGGAATTACCTCCAGCCAGGATATATCGCGTAGGATaGACAGCACTGAGGGAACACACAGATACAAGACATTCTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NLPLELPPARIYRVG*TALREHTDTRHSPQ Trigger: TTGGGGAGAATGTCTTGTATCTGTGTGTTCCCTCAGTGCTGTGCATCCTACGCGATATATCCTGGCTGGAGGTAATTCCAGTGGCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CCA 90 bp | AGAATGCACATTCTTTCCCGACTCGTGGAAGACTTCCACCCGTCGTaGGTGGTCCATGCTACCAACTATGAAGCAATCTTCTTGTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RMHILSRLVEDFHPS*VVHATNYEAIFLFR Trigger: CCTAAACAAGAAGATTGCTTCATAGTTGGTAGCATGGACCACCCACGACGGGTGGAAGTCTTCCACGAGTCGGGAAAGAATGTGCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAGAATCCGAGGTCCTCTaGGGTCCCAGCCTGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: KWPSSSSLANITFCVEVSESEVL*GPSLVL Trigger: AAGTACCAGGCTGGGACCCAAGAGGACCTCGGATTC...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTGGCTACAGAATTTCACTGCTGTCATCTaGGTTTTCAGGAATCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQEVGAGGSVLGHPWLQNFTAVI*VFRNHF Trigger: GAAATGATTCCTGAAAACCAAGATGACAGCAGTGAA...ATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS-3UTR CAA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAGGGCCACGGAGGAGATaGCTCCTTTGGTCACCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KWPSSSSLANITFCVEVSGPRRR*LLWSPY Trigger: GTAAGGTGACCAAAGGAGCAATCTCCTCCGTGGCCC...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTCCAATTTGTCCAGACTaGGCCCCAGCTGCTACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLANITFCVEVSLRKQCPICPD*APAATK Trigger: CTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTGG...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTCTCCCAGTGACAGTGTaGTGCCTGATGGTACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLANITFCVEVSLRKQCLPVTV*CLMVLR Trigger: CCTCAGTACCATCAGGCACAACACTGTCACTGGGAG...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS GCA 90 bp | AGCACATGTAGTCACCACTCTGTTACCAGTAACGGGGGAGAAATATaGAGAGGCAATGCTTTTCGAGTGCTCAGTCAAGGAAATCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STCSHHSVTSNGGEI*RGNAFRVLSQGNQR Trigger: CCTCTGATTTCCTTGACTGAGCACTCGAAAAGCATTGCCTCTGCATATTTCTCCCCCGTTACTGGTAACAGAGTGGTGACTACATGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCTCTGCATACCAATTTTTCATGTGGGTCCTAGGGATTGAACTCAGGTCTCTAGACAGCCCCTTCTaGGTCTTCTCATTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PASAYQFFMWVLGIELRSLDSPF*VFSLLV Trigger: GACAAGTAATGAGAAGACCAAGAAGGGGCTGTCTAG...AGACCTGAGTTCAATCCCTAGGACCCACATGAAAAATTGGTATGCAGAGGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTATCCCAAAGTCCAATTaGTCCAGACTTGGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLANITFCVEVSLRKQCIPKSN*SRLGPS Trigger: GCTGGGGCCAAGTCTGGACAAATTGGACTTTGGGAT...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGAGGTCGGGGCAGGAGGCTCAGTTCTAGGTCATCCTTGGCTACAGAATATAAAAACATGTAACTaGCCACTGGAATTACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQEVGAGGSVLGHPWLQNIKTCN*PLELPP Trigger: TGGAGGTAATTCCAGTGGCAAGTTACATGTTTTTAT...ATTCTGTAGCCAAGGATGACCTAGAACTGAGCCTCCTGCCCCGACCTCCTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAATCCCAAAGTCCAATTaGTCCAGACTTGGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KWPSSSSLANITFCVEVSIPKSN*SRLGPS Trigger: GCTGGGGCCAAGTCTGGACAAATTGGACTTTGGGAT...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS TCA 90 bp | TCAGGAACCTGGCATCGTAAACATGAACGTCCCTCAATCCTGCTGTaGCAAAATACTGTCTGGATAGTGGGTGGACATGAACAGTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SGTWHRKHERPSILL*QNTVWIVGGHEQFL Trigger: TAAGAACTGTTCATGTCCACCCACTATCCAGACAGTATTTTGTCACAGCAGGATTGAGGGACGTTCATGTTTACGATGCCAGGTTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTGAGAAAGCAGTGTCTAGACAGCCCCTTCTaGGTCTTCTCATTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLANITFCVEVSLRKQCLDSPF*VFSLLV Trigger: GACAAGTAATGAGAAGACCAAGAAGGGGCTGTCTAG...ACACTGCTTTCTCAGTGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TATTTTAAATTCCACCTTAGGGCTGTAGCTGGTCTTTACTACTTTGTGGATTTTGAATCCGAGGTCCTCTaGGGTCCCAGCCTGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: YFKFHLRAVAGLYYFVDFESEVL*GPSLVL Trigger: AAGTACCAGGCTGGGACCCAAGAGGACCTCGGATTC...AAAATCCACAAAGTAGTAAAGACCAGCTACAGCCCTAAGGTGGAATTTAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
||
| CDS-3UTR CAA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTAGACAGCCCCTTCTaGGTCTTCTCATTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KWPSSSSLANITFCVEVSLDSPF*VFSLLV Trigger: GACAAGTAATGAGAAGACCAAGAAGGGGCTGTCTAG...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS-3UTR CAA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACCCAATTTGTCCAGACTaGGCCCCAGCTGCTACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CGGLTEKAVLYLLNITRDPICPD*APAATK Trigger: CTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTGG...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACCTCCCAGTGACAGTGTaGTGCCTGATGGTACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGGLTEKAVLYLLNITRDLPVTV*CLMVLR Trigger: CCTCAGTACCATCAGGCACAACACTGTCACTGGGAG...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS-3UTR CAA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCACTTCTTCTACTAATGTaGGCTGTGTTGGAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KWPSSSSLANITFCVEVSLLLLM*AVLEML Trigger: CAGCATCTCCAACACAGCCAACATTAGTAGAAGAAG...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS CCA 90 bp | CTTTTAATACTAGACAGCCCCTTCTTGGTCTTCTCATTACTTGTCTaGCTCATCTCTGCCCATGTCTTCAAAGATGCTTTCAACAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLILDSPFLVFSLLV*LISAHVFKDAFNSS Trigger: TGAACTGTTGAAAGCATCTTTGAAGACATGGGCAGAGATGAGCCAGACAAGTAATGAGAAGACCAAGAAGGGGCTGTCTAGTATTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS-3UTR CAA 90 bp | CACACCTATATTCCCAGCACTTGGAAAAGTGAGGCAGAAGGACTAAGTTCAAAGTTCACTGCTGTCATCTaGGTTTTCAGGAATCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTYIPSTWKSEAEGLSSKFTAVI*VFRNHF Trigger: GAAATGATTCCTGAAAACCAAGATGACAGCAGTGAA...CTTTGAACTTAGTCCTTCTGCCTCACTTTTCCAAGTGCTGGGAATATAGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 |
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| CDS CCA 90 bp | CAGTATAAGCATCCACGGATGATTTCAGCAGAAGGGAATCTGCCTTaGAAGATAAGGCCTTCATTTTTGAAGTTAAAACCTTTCTACGAG | + |
|
Preference number: 5 (lower is better) Translates to: QYKHPRMISAEGNLP*KIRPSFLKLKPFYE Trigger: CTCGTAGAAAGGTTTTAACTTCAAAAATGAAGGCCTTATCTTCCAAGGCAGATTCCCTTCTGCTGAAATCATCCGTGGATGCTTATACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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| CDS-3UTR CAA 90 bp | AAAAGAATTAGACTGGATAGAAGTGGTACCCAACACTGGGACTCAATTTTTATTCTAGACAGCCCCTTCTaGGTCTTCTCATTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KRIRLDRSGTQHWDSIFILDSPF*VFSLLV Trigger: GACAAGTAATGAGAAGACCAAGAAGGGGCTGTCTAG...AATAAAAATTGAGTCCCAGTGTTGGGTACCACTTCTATCCAGTCTAATTCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110602.9 |
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| CDS-3UTR CAA 90 bp | AAATGGCCTTCAAGTTCCTCCCTTGCTAATATTACATTCTGTGTGGAGGTCTCAATAAAAACATGTAACTaGCCACTGGAATTACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KWPSSSSLANITFCVEVSIKTCN*PLELPP Trigger: TGGAGGTAATTCCAGTGGCAAGTTACATGTTTTTAT...TGAGACCTCCACACAGAATGTAATATTAGCAAGGGAGGAACTTGAAGGCCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS-3UTR CAA 90 bp | TGTGGAGGTCTCACTGAGAAAGCAGTGTTATATTTACTAAATATAACACGTGACTTCACTGCTGTCATCTaGGTTTTCAGGAATCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGGLTEKAVLYLLNITRDFTAVI*VFRNHF Trigger: GAAATGATTCCTGAAAACCAAGATGACAGCAGTGAA...GTCACGTGTTATATTTAGTAAATATAACACTGCTTTCTCAGTGAGACCTCCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS GCA 72 bp | ACGGAGCCGTGCAGCCGAGTTCAGGGAGGGGCAGCATaGAACACCCACCAGCAGGCTCACAAGTGTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TEPCSRVQGGAA*NTHQQAHKCLS Trigger: GCTGAGACACTTGTGAGCCTGCTGGTGGGTGTTGCATGCTGCCCCTCCCTGAACTCGGCTGCACGGCTCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
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| CDS CCA 72 bp | GCCCCAGCTGCTACCAAGGTTCTCACTTCTGATGGGTaGAGGGCCACGGAGGAGATTGCTCCTTTGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: APAATKVLTSDG*RATEEIAPLVT Trigger: GGTGACCAAAGGAGCAATCTCCTCCGTGGCCCTCCACCCATCAGAAGTGAGAACCTTGGTAGCAGCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS TCA 72 bp | AGACTTGGCCCCAGCTGCTACCAAGGTTCTCACTTCTaGTGGGTGGAGGGCCACGGAGGAGATTGCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLGPSCYQGSHF*WVEGHGGDCSF Trigger: AAAGGAGCAATCTCCTCCGTGGCCCTCCACCCATCAGAAGTGAGAACCTTGGTAGCAGCTGGGGCCAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS CAA 90 bp | TCCCACACAGCCTGGAACCTCGTTAGCCACCTCCCAGTGACAGTGTaGTGCCTGATGGTACTGAGGAGAGGAAGCTGGGAAGATATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHTAWNLVSHLPVTV*CLMVLRRGSWEDME Trigger: CTCCATATCTTCCCAGCTTCCTCTCCTCAGTACCATCAGGCACAACACTGTCACTGGGAGGTGGCTAACGAGGTTCCAGGCTGTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS CAA 72 bp | TCTGATGGGTGGAGGGCCACGGAGGAGATTGCTCCTTaGGTCACCTTACGAACAGTAGCCTCACTGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: SDGWRATEEIAP*VTLRTVASLMT Trigger: GGTCATCAGTGAGGCTACTGTTCGTAAGGTGACCAAAGGAGCAATCTCCTCCGTGGCCCTCCACCCATCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS CAA 90 bp | GTTCTCACTTCTGATGGGTGGAGGGCCACGGAGGAGATTGCTCCTTaGGTCACCTTACGAACAGTAGCCTCACTGATGACCATGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: VLTSDGWRATEEIAP*VTLRTVASLMTMPL Trigger: AAGTGGCATGGTCATCAGTGAGGCTACTGTTCGTAAGGTGACCAAAGGAGCAATCTCCTCCGTGGCCCTCCACCCATCAGAAGTGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS CCA 72 bp | GTGACAAATGTCCATCCCAGTGTCCCACTAGCAGACTaGAGGAATCGTTCAAGAAGTCAAAGGAGGACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VTNVHPSVPLAD*RNRSRSQRRTG Trigger: GCCCGTCCTCCTTTGACTTCTTGAACGATTCCTCCAGTCTGCTAGTGGGACACTGGGATGGACATTTGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CCA 72 bp | CTTCTTGGTCAGACCCTACCTCCTCAAACACAGCGCTaGAAAAATCACCACATCGCAGTGTGCCGTCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGQTLPPQTQR*KNHHIAVCRHS Trigger: GCTATGACGGCACACTGCGATGTGGTGATTTTTCCAGCGCTGTGTTTGAGGAGGTAGGGTCTGACCAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099473.10 |
||
| CDS CCA 72 bp | TTCCCTCATTCCTGTACACCTCCTCAAACACAGCGCTaGAAAAATCACCACATCGCAGTGTGCCGTCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPHSCTPPQTQR*KNHHIAVCRHS Trigger: GCTATGACGGCACACTGCGATGTGGTGATTTTTCCAGCGCTGTGTTTGAGGAGGTGTACAGGAATGAGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CCA 72 bp | TTTCCCGACTCGTGGAAGACTTCCACCCGTCGTGGGTaGTCCATGCTACCAACTATGAAGCAATCTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FPDSWKTSTRRG*SMLPTMKQSSC Trigger: ACAAGAAGATTGCTTCATAGTTGGTAGCATGGACCACCCACGACGGGTGGAAGTCTTCCACGAGTCGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CCA 72 bp | ATTCTTTCCCGACTCGTGGAAGACTTCCACCCGTCGTaGGTGGTCCATGCTACCAACTATGAAGCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILSRLVEDFHPS*VVHATNYEAIF Trigger: GAAGATTGCTTCATAGTTGGTAGCATGGACCACCCACGACGGGTGGAAGTCTTCCACGAGTCGGGAAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CAA 72 bp | ATCTTCACTCTGCTGGGTCAAATCCCAAAGTCCAATTaGTCCAGACTTGGCCCCAGCTGCTACCAAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: IFTLLGQIPKSN*SRLGPSCYQGS Trigger: AGAACCTTGGTAGCAGCTGGGGCCAAGTCTGGACAAATTGGACTTTGGGATTTGACCCAGCAGAGTGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS GCA 72 bp | AGTCACCACTCTGTTACCAGTAACGGGGGAGAAATATaGAGAGGCAATGCTTTTCGAGTGCTCAGTCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SHHSVTSNGGEI*RGNAFRVLSQG Trigger: TCCTTGACTGAGCACTCGAAAAGCATTGCCTCTGCATATTTCTCCCCCGTTACTGGTAACAGAGTGGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS GCA 72 bp | CTGGAATTACCTCCAGCCAGGATATATCGCGTAGGATaGACAGCACTGAGGGAACACACAGATACAAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: LELPPARIYRVG*TALREHTDTRH Trigger: ATGTCTTGTATCTGTGTGTTCCCTCAGTGCTGTGCATCCTACGCGATATATCCTGGCTGGAGGTAATTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS GCA 72 bp | GAACACACAGATACAAGACATTCTCCCCAAAGAGAATaGACATTCTTTCCCGACTCGTGGAAGACTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: EHTDTRHSPQRE*TFFPDSWKTST Trigger: GGTGGAAGTCTTCCACGAGTCGGGAAAGAATGTGCATTCTCTTTGGGGAGAATGTCTTGTATCTGTGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CAA 72 bp | TCTTTATATTCATTCACCTGCACAAGGGGACACTGTTaGGAGCCTGCCTTTTCCTCAGATTCAGCCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLYSFTCTRGHC*EPAFSSDSALD Trigger: GTCCAAGGCTGAATCTGAGGAAAAGGCAGGCTCCAAACAGTGTCCCCTTGTGCAGGTGAATGAATATAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
||
| CDS TCA 72 bp | TGGCATCGTAAACATGAACGTCCCTCAATCCTGCTGTaGCAAAATACTGTCTGGATAGTGGGTGGACATGAA | + |
|
Preference number: 6 (lower is better) Translates to: WHRKHERPSILL*QNTVWIVGGHE Trigger: TTCATGTCCACCCACTATCCAGACAGTATTTTGTCACAGCAGGATTGAGGGACGTTCATGTTTACGATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028676.12 ENSMUST00000110602.9 ENSMUST00000110603.2 |
||
| CDS CAA 72 bp | GCATCCACGGATGATTTCAGCAGAAGGGAATCTGCCTaGGAAGATAAGGCCTTCATTTTTGAAGTTAAAACC | + |
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Preference number: 6 (lower is better) Translates to: ASTDDFSRRESA*EDKAFIFEVKT Trigger: GGTTTTAACTTCAAAAATGAAGGCCTTATCTTCCAAGGCAGATTCCCTTCTGCTGAAATCATCCGTGGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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| CDS GCA 72 bp | CTGCCCATGTCTTCAAAGATGCTTTCAACAGTTCACTaGTGTCATCTTGGTTTTCAGGAATCATTTCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: LPMSSKMLSTVH*CHLGFQESFLR Trigger: CCTTAGAAATGATTCCTGAAAACCAAGATGACAGCAGTGAACTGTTGAAAGCATCTTTGAAGACATGGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS CCA 72 bp | CATCCACGGATGATTTCAGCAGAAGGGAATCTGCCTTaGAAGATAAGGCCTTCATTTTTGAAGTTAAAACCT | + |
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Preference number: 6 (lower is better) Translates to: HPRMISAEGNLP*KIRPSFLKLKP Trigger: AGGTTTTAACTTCAAAAATGAAGGCCTTATCTTCCAAGGCAGATTCCCTTCTGCTGAAATCATCCGTGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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| CDS CAA 72 bp | ACCACTGATTTGCTAGAATTATTTACAACCGGGGATTaGGACAACTTAAGTAGGCCTAGCTTGGAATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TTDLLELFTTGD*DNLSRPSLELL Trigger: CAGCAATTCCAAGCTAGGCCTACTTAAGTTGTCCAAATCCCCGGTTGTAAATAATTCTAGCAAATCAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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| CDS CAA 90 bp | GAGGTAACAAAGGATTTTCTTCTTCTTCTACTAATGTTGGCTGTGTaGGAGATGCTGGTAATGAAACTCCCAAAGGGTCTACTTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: EVTKDFLLLLLMLAV*EMLVMKLPKGLLST Trigger: TGTTGAAAGTAGACCCTTTGGGAGTTTCATTACCAGCATCTCCAACACAGCCAACATTAGTAGAAGAAGAAGAAAATCCTTTGTTACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028676.12 ENSMUST00000099473.10 ENSMUST00000110602.9 ENSMUST00000110603.2 |
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| CDS CAA 90 bp | TTCTTATGGACCACTGATTTGCTAGAATTATTTACAACCGGGGATTaGGACAACTTAAGTAGGCCTAGCTTGGAATTGCTGAGTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: FLWTTDLLELFTTGD*DNLSRPSLELLSEN Trigger: GTTTTCACTCAGCAATTCCAAGCTAGGCCTACTTAAGTTGTCCAAATCCCCGGTTGTAAATAATTCTAGCAAATCAGTGGTCCATAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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| CDS CCA 72 bp | ACCTTTCTACGAGTCTTCTTCCGATCTTTCTTCTTATaGACCACTGATTTGCTAGAATTATTTACAACCGGG | + |
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Preference number: 6 (lower is better) Translates to: TFLRVFFRSFFL*TTDLLELFTTG Trigger: CCCGGTTGTAAATAATTCTAGCAAATCAGTGGTCCATAAGAAGAAAGATCGGAAGAAGACTCGTAGAAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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| CDS CAA 72 bp | GTCTTCTTCCGATCTTTCTTCTTATGGACCACTGATTaGCTAGAATTATTTACAACCGGGGATTTGGACAAC | + |
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Preference number: 6 (lower is better) Translates to: VFFRSFFLWTTD*LELFTTGDLDN Trigger: GTTGTCCAAATCCCCGGTTGTAAATAATTCTAGCAAATCAGTGGTCCATAAGAAGAAAGATCGGAAGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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| CDS CAA 90 bp | TTTCTACGAGTCTTCTTCCGATCTTTCTTCTTATGGACCACTGATTaGCTAGAATTATTTACAACCGGGGATTTGGACAACTTAAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: FLRVFFRSFFLWTTD*LELFTTGDLDNLSR Trigger: CCTACTTAAGTTGTCCAAATCCCCGGTTGTAAATAATTCTAGCAAATCAGTGGTCCATAAGAAGAAAGATCGGAAGAAGACTCGTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110603.2 |
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