Pregenerated sensors for WDR75 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025995Ensembl transcript IDs: ENSMUST00000027139.15, ENSMUST00000147308.2, ENSMUST00000186651.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTTTTCTGAACTTTCTCAGCTCCTTCTCTTCAGATTTTGACAGCTaGTGTATAGCATCTTCTCCCAAGTCCGTGTTGTTATTTGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: TFLNFLSSFSSDFDS*CIASSPKSVLLFVS Trigger: GGAAACAAATAACAACACGGACTTGGGAGAAGATGCTATACATCAGCTGTCAAAATCTGAAGAGAAGGAGCTGAGAAAGTTCAGAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186651.2 |
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| 3UTR TCA 90 bp | ATAATCTACTTTTCTGAACTTTCTCAGCTCCTTCTCTTCAGATTTTaGCAGCTGATGTATAGCATCTTCTCCCAAGTCCGTGTTGTTATT | + |
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Preference number: 1 (lower is better) Translates to: IIYFSELSQLLLFRF*QLMYSIFSQVRVVI Trigger: AATAACAACACGGACTTGGGAGAAGATGCTATACATCAGCTGTCAAAATCTGAAGAGAAGGAGCTGAGAAAGTTCAGAAAAGTAGATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186651.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTCTCTTTGTCATGGCACAGCCATGGCCTACTACAGAGCAGTTAGCCAGCTAAGTCCGTGTTGTTATTaGTTTCCTTGTCTTTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: MSLCHGTAMAYYRAVSQLSPCCY*FPCLFQ Trigger: CTGAAAAAGACAAGGAAACAAATAACAACACGGACT...TAGCTGGCTAACTGCTCTGTAGTAGGCCATGGCTGTGCCATGACAAAGAGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186651.2 |
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| 3UTR TCA 72 bp | AACTTTCTCAGCTCCTTCTCTTCAGATTTTGACAGCTaGTGTATAGCATCTTCTCCCAAGTCCGTGTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: NFLSSFSSDFDS*CIASSPKSVLL Trigger: TAACAACACGGACTTGGGAGAAGATGCTATACATCAGCTGTCAAAATCTGAAGAGAAGGAGCTGAGAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186651.2 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGCACAAGAAAGAAGCTaGTGGCAGGACATGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAAQERS*WQDMGW Trigger: CCAGCCCATGTCCTGCCATCAGCTTCTTTCTTGTGC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000186651.2 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTGGCAGGACATGGGCTaGGGTGTGAAGAAGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAWQDMG*GVKKLS Trigger: ACTGAGCTTCTTCACACCCCAGCCCATGTCCTGCCA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000186651.2 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTGCAGCAACATGGTCTaGGTAAGGGTCGGGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMACSNMV*VRVGFH Trigger: ATGGAACCCGACCCTTACTCAGACCATGTTGCTGCA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTAGCTTCCACGTCCTaGCTTGTTGATTTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALASTS*LVDLGS Trigger: GCTGCCCAAATCAACAAGCCAGGACGTGGAAGCTAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCAGAGAGCTGTGATGTaGTCATCATGTGGCATGGCG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAQRAVM*SSCGMA Trigger: CGCCATGCCACATGATGACCACATCACAGCTCTCTG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTTCTGGGACATCTCGTaGGACAAACACTCCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAFWDIS*DKHSPL Trigger: CAGTGGGGAGTGTTTGTCCCACGAGATGTCCCAGAA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCGTGCTATAGACCTTaGCAAAGTCTCCCGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASCYRP*QSLPRH Trigger: GTGTCTCGGGAGACTTTGTCAAGGTCTATAGCACGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTCTTTGTTCTTCTCTaGTCCATCTCGCCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALFVLL*SISPLH Trigger: GTGGAGTGGCGAGATGGATCAGAGAAGAACAAAGAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTGTGACCAGATGCAATaGAATCTTCCTTCGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMACDQMQ*NLPSGG Trigger: GCCACCCGAAGGAAGATTGCATTGCATCTGGTCACA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCCAAAGGCGGATTTTaGCGTCCATGTGACCAGATG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASKGGF*RPCDQM Trigger: CATCTGGTCACATGGACGGCAAAATCCGCCTTTGGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGCGTTGTTCAACTGTTaGCAACCAAGTCCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAALFNC*QPSPRA Trigger: TGCTCTGGGACTTGGTTGGCAACAGTTGAACAACGC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCCTGGCTTGTTGATTTaGGCAGCTTCACTGACACCA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAPGLLI*AASLTP Trigger: TGGTGTCAGTGAAGCTGCCCAAATCAACAAGCCAGG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGCCGAGGAGATACTTTaGGCATGTCAGTCTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAAEEIL*ACQSSK Trigger: TTTGGAAGACTGACATGCTCAAAGTATCTCCTCGGC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAGATCTGTGTGCCCATaGAGAATGTGCACACACTCT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMARSVCP*RMCTHS Trigger: AGAGTGTGTGCACATTCTGCATGGGCACACAGATCT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGTCCATGTGACCAGATaGAATGCAATCTTCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAVHVTR*NAIFLR Trigger: CCGAAGGAAGATTGCATTGCATCTGGTCACATGGAC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTGTTCAGCCACTGGTaGGTTTCTGACGTGAATGAT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALFSHW*VSDVND Trigger: ATCATTCACGTCAGAAACGCACCAGTGGCTGAACAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGTTAACTTTGCACCCTaGTGTTGCCTGTGTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAVNFAP*CCLCFP Trigger: GGGAAAACACAGGCAACAGCAGGGTGCAAAGTTAAC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCATCCACACTTTGAAGTaGCCATCTCTGCTAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAIHTLK*PSLLAV Trigger: CACAGCTAGCAGAGATGGCCACTTCAAAGTGTGGAT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGATCTGTTCAGCCACTaGTGCGTTTCTGACGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMADLFSH*CVSDVN Trigger: ATTCACGTCAGAAACGCACCAGTGGCTGAACAGATC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTTTGGGCAGCTTCACTaGCACCAGCTGAAATATATC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAFGQLH*HQLKYI Trigger: GATATATTTCAGCTGGTGTCAGTGAAGCTGCCCAAA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGGCAGGCTACACATGTaGACTTGTTCTTTGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAGRLHM*TCSLHS Trigger: AGAATGCAAAGAACAAGTTCACATGTGTAGCCTGCC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTGGAGACATTCTTCTaGATATACAATGGCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALETFF*IYNGLG Trigger: GCCAAGGCCATTGTATATTCAGAAGAATGTCTCCAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTTCCAAAGCAAAGGTaGCTTATTTTCCCAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALPKQR*LIFPAR Trigger: ACGAGCTGGGAAAATAAGGCACCTTTGCTTTGGAAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTGGCAAACTTTCTTCTaGCAGCAGCTGTTTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAWQTFF*QQLFAC Trigger: ACAAGCAAACAGCTGCTGGCAGAAGAAAGTTTGCCA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTTTGCACCCTGCTGTTaGCTGTGTTTTCCCAATATG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAFAPCC*LCFPNM Trigger: CATATTGGGAAAACACAGGCAACAGCAGGGTGCAAA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCCATAACCATGTCGTaGTGCCAATGCAAACATGTG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASITMS*CQCKHV Trigger: CACATGTTTGCATTGGCACCACGACATGGTTATGGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCAGCTGTTTGCTTGTTaGTGTGAGTTTCTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAQLFAC*CEFLFW Trigger: CCAGAAGAGAAACTCACACCAACAAGCAAACAGCTG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAGAAAATGGGGTCGTTaGCAAACTTTCTTCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMARKWGR*QTFFCQ Trigger: CTGGCAGAAGAAAGTTTGCCAACGACCCCATTTTCT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | TGTATAGCATCTTCTCCCAAGTCCGTGTTGTTATTTGTTTCCTTGTCTTTTTCATGGCAGGACATGGGCTaGGGTGTGAAGAAGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: CIASSPKSVLLFVSLSFSWQDMG*GVKKLS Trigger: ACTGAGCTTCTTCACACCCCAGCCCATGTCCTGCCA...TGAAAAAGACAAGGAAACAAATAACAACACGGACTTGGGAGAAGATGCTATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186651.2 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCATTTCCAAAGGCAATaGACTTGGGGGACCTATTTA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAHFQRQ*TWGTYL Trigger: TAAATAGGTCCCCCAAGTGCATTGCCTTTGGAAATG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTTCTGAATATACAATaGCCTTGGCTCGCTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALLNIQ*PWLARF Trigger: AAACCTAGCGAGCCAAGGCCATTGTATATTCAGAAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTGGAGACTTTGTACTaGATGTTAATAAGCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALETLY*MLISSV Trigger: CACAGAGCTTATTAACATTCAGTACAAAGTCTCCAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR TCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTTCTCTTCAGATTTTaGCAGCTGATGTATAGCATC | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALLFRF*QLMYSI Trigger: GATGCTATACATCAGCTGTCAAAATCTGAAGAGAAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCATAACCATGTCGTGGTaGCAATGCAAACATGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAITMSW*QCKHVY Trigger: ATACACATGTTTGCATTGGCACCACGACATGGTTAT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTTCCACAGTTTCATTTaGAGCTCCAGCTCATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAFHSFI*SSSSFS Trigger: TGAAAATGAGCTGGAGCTGCAAATGAAACTGTGGAA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCACCCTTGGGTTTTCTTaGTATAGTTCCACAGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMATLGFS*YSSTVS Trigger: TGAAACTGTGGAACTATAGCAAGAAAACCCAAGGGT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCAAAGGCAATGCACTTaGGGGACCTATTTATGTAAT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAQRQCT*GTYLCN Trigger: ATTACATAAATAGGTCCCCCAAGTGCATTGCCTTTG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAAGTCTTTATCAGAATaGCATCAACATAGTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAKSLSE*HQHSPT Trigger: TGTGGGACTATGTTGATGGCATTCTGATAAAGACTT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTTGAATTACTGCCGATaGATCAAGATTTCGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALNYCR*IKISVN Trigger: ATTCACCGAAATCTTGATGCATCGGCAGTAATTCAA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCTAGATTGTATAACTaGTTATCACCCTGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASRLYN*LSPWRE Trigger: TTCTCTCCAGGGTGATAAGCAGTTATACAATCTAGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCAAAACTAAAGCTTTaGTTCTTGGGTCAACCATCA | + |
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Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASKLKL*FLGQPS Trigger: TGATGGTTGACCCAAGAACCAAAGCTTTAGTTTTGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTTTGTTAGTTCAGTTTaGGTTAGACCCTCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAFVSSV*VRPSSL Trigger: CAATGATGAGGGTCTAACCCAAACTGAACTAACAAA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCATTTTCATTTTCTTaGCGTTGTTCAACTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASFSFS*RCSTVA Trigger: GGCAACAGTTGAACAACGCCAAGAAAATGAAAATGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCAGAGAAACAACAATTaGTTGCTTGATACTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAQRNNN*LLDTCG Trigger: ACCACAAGTATCAAGCAACCAATTGTTGTTTCTCTG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTGTGAGTTTCTCTTCTaGAGACTTTGTACTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMACEFLF*RLCTEC Trigger: ACATTCAGTACAAAGTCTCCAGAAGAGAAACTCACA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGAAACAACAATTGGTTaGTTGATACTTGTGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAETTIG*LILVVT Trigger: AGTTACCACAAGTATCAAGCAACCAATTGTTGTTTC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS TCA 90 bp | AGACACAGAAGATATACTTGGAATCCACGGAGAACACGGCCCTCCTaGAGTTCAGCCGGCTGCCGCCGCAGCGAACCACGCGGACTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RHRRYTWNPRRTRPS*SSAGCRRSEPRGLP Trigger: AGGGAGTCCGCGTGGTTCGCTGCGGCGGCAGCCGGCTGAACTTCAGGAGGGCCGTGTTCTCCGTGGATTCCAAGTATATCTTCTGTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
||
| CDS TCA 90 bp | AGACAGCAGCAGCGAGTTTACAAACAGAGAGCACAAGAAAGAAGCTaGTGGCAGGACATGGGCTGGGGTGTGAAGAAGCTCAGTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: RQQQRVYKQRAQERS*WQDMGWGVKKLSNC Trigger: GCAATTACTGAGCTTCTTCACACCCCAGCCCATGTCCTGCCATCAGCTTCTTTCTTGTGCTCTCTGTTTGTAAACTCGCTGCTGCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000186651.2 |
||
| CDS GCA 90 bp | GTGAAAGTTCCTCCAAAGGCGGATTTTGCCGTCCATGTGACCAGATaGAATGCAATCTTCCTTCGGGTGGCAGGCTACACATGTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: VKVPPKADFAVHVTR*NAIFLRVAGYTCEL Trigger: AAGTTCACATGTGTAGCCTGCCACCCGAAGGAAGATTGCATTGCATCTGGTCACATGGACGGCAAAATCCGCCTTTGGAGGAACTTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS GCA 90 bp | ATGTGTACTTCTGATCACTGTGAAAGTTCCTCCAAAGGCGGATTTTaGCGTCCATGTGACCAGATGCAATGCAATCTTCCTTCGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MCTSDHCESSSKGGF*RPCDQMQCNLPSGG Trigger: GCCACCCGAAGGAAGATTGCATTGCATCTGGTCACATGGACGGCAAAATCCGCCTTTGGAGGAACTTTCACAGTGATCAGAAGTACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CCA 90 bp | TCCCCACTGGACTTCCTCTCTGGAGACATTCTTCTGAATATACAATaGCCTTGGCTCGCTAGGTTTAAATACAAACAGATCGGAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLDFLSGDILLNIQ*PWLARFKYKQIGAR Trigger: GCGGGCTCCGATCTGTTTGTATTTAAACCTAGCGAGCCAAGGCCATTGTATATTCAGAAGAATGTCTCCAGAGAGGAAGTCCAGTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAGATGGTTGCTGGGGTaGACGAGGATTCCAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMARWLLG*TRIPDT Trigger: GGTGTCTGGAATCCTCGTCAACCCCAGCAACCATCT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGGCGTTGTTCAACTGTaGCCAACCAAGTCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAGVVQL*PTKSQS Trigger: GCTCTGGGACTTGGTTGGCAACAGTTGAACAACGCC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS TCA 90 bp | CATGCAGAATGTGCACACACTCTTCTGTGGTCGTGCTATAGACCTTaGCAAAGTCTCCCGAGACACAGAAGATATACTTGGAATCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: HAECAHTLLWSCYRP*QSLPRHRRYTWNPR Trigger: CCGTGGATTCCAAGTATATCTTCTGTGTCTCGGGAGACTTTGTCAAGGTCTATAGCACGACCACAGAAGAGTGTGTGCACATTCTGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
||
| CDS TCA 90 bp | CCAACAGCAGAGAATGCCATTGTCAGTAGTGCCGAGGAGATACTTTaGGCATGTCAGTCTTCCAAAGCAAAGGTGCCTTATTTTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTAENAIVSSAEEIL*ACQSSKAKVPYFPS Trigger: GCTGGGAAAATAAGGCACCTTTGCTTTGGAAGACTGACATGCTCAAAGTATCTCCTCGGCACTACTGACAATGGCATTCTCTGCTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCAGCAGAGAATGCCATaGTCAGTAGTGCCGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAQQRMP*SVVPRR Trigger: TCTCCTCGGCACTACTGACAATGGCATTCTCTGCTG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CCA 90 bp | CTTTGCACCCTGCTGTTGCCTGTGTTTTCCCAATATGAAAGAAAATaGGGTCGTTGGCAAACTTTCTTCTGCCAGCAGCTGTTTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCTLLLPVFSQYERK*GRWQTFFCQQLFAC Trigger: ACAAGCAAACAGCTGCTGGCAGAAGAAAGTTTGCCAACGACCCCATTTTCTTTCATATTGGGAAAACACAGGCAACAGCAGGGTGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCTGCCAGCAGCTGTTaGCTTGTTGGTGTGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASASSC*LVGVSF Trigger: GAAACTCACACCAACAAGCAAACAGCTGCTGGCAGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS TCA 90 bp | GGGACAAACACTCCCCACTGGACTTCCTCTCTGGAGACATTCTTCTaGATATACAATGGCCTTGGCTCGCTAGGTTTAAATACAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTNTPHWTSSLETFF*IYNGLGSLGLNTNR Trigger: TCTGTTTGTATTTAAACCTAGCGAGCCAAGGCCATTGTATATTCAGAAGAATGTCTCCAGAGAGGAAGTCCAGTGGGGAGTGTTTGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS GCA 90 bp | GCCATCTCTGCTAGCTGTGACCAGGATGGGTTTTTCATAGCTTTCTaGATTATTGAAACAGAGAGCTGTGATGTGGTCATCATGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AISASCDQDGFFIAF*IIETESCDVVIMWH Trigger: ATGCCACATGATGACCACATCACAGCTCTCTGTTTCAATAATGCAGAAAGCTATGAAAAACCCATCCTGGTCACAGCTAGCAGAGATGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTGCCGAGGAGATACTTaGAGCATGTCAGTCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMACRGDT*SMSVFQ Trigger: TTGGAAGACTGACATGCTCAAAGTATCTCCTCGGCA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTTTGCACCCTGCTGTaGCCTGTGTTTTCCCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALCTLL*PVFSQY Trigger: ATATTGGGAAAACACAGGCAACAGCAGGGTGCAAAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CCA 90 bp | GTAAGGAAGACGGAATCTTCCGCGTGGAGAGGAATAAAGAAGGCGTaGAGTTTAGGTCCAATAGTGAAAGTCTTTATCAGAATGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VRKTESSAWRGIKKA*SLGPIVKVFIRMPS Trigger: TGATGGCATTCTGATAAAGACTTTCACTATTGGACCTAAACTCCACGCCTTCTTTATTCCTCTCCACGCGGAAGATTCCGTCTTCCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCACACAGAAGATATACTaGGAATCCACGGAGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMATQKIY*ESTENT Trigger: CGTGTTCTCCGTGGATTCCAAGTATATCTTCTGTGT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTAAAGCTTTGGTTCTaGGGTCAACCATCAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALKLWF*GQPSNQ Trigger: CTGGTTTGATGGTTGACCCAAGAACCAAAGCTTTAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGTTCCACAGTTTCATTaGCAGCTCCAGCTCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAVPQFH*QLQLIF Trigger: GAAAATGAGCTGGAGCTGCAAATGAAACTGTGGAAC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAAGAAAATGGGGTCGTaGGCAAACTTTCTTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAKKMGS*ANFLLP Trigger: TGGCAGAAGAAAGTTTGCCAACGACCCCATTTTCTT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAAGTTTCTGTTAACTTaGCACCCTGCTGTTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAKFLLT*HPAVAC Trigger: ACAGGCAACAGCAGGGTGCAAAGTTAACAGAAACTT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCGAGGAAGAAACTCTTaGTTCTTCTCTGATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMARGRNS*FFSDPS Trigger: AGATGGATCAGAGAAGAACAAAGAGTTTCTTCCTCG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTCTCCCAAGTCCGTGTaGTTATTTGTTTCCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASPKSV*LFVSLS Trigger: AGACAAGGAAACAAATAACAACACGGACTTGGGAGA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CCA 90 bp | GCTTTCTGCATTATTGAAACAGAGAGCTGTGATGTGGTCATCATGTaGCATGGCGATCTTTGTGTTAAGAACAAACCCTTGGGTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AFCIIETESCDVVIM*HGDLCVKNKPLGFL Trigger: AAGAAAACCCAAGGGTTTGTTCTTAACACAAAGATCGCCATGCCACATGATGACCACATCACAGCTCTCTGTTTCAATAATGCAGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CCA 90 bp | CAGCTGAAATATATCTGGCCAGAGGAAGTCATTTCTTACAGTTTCTaGCTCTTCTTTACTTATTGTAAGGAAGACGGAATCTTCCGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLKYIWPEEVISYSF*LFFTYCKEDGIFRV Trigger: CACGCGGAAGATTCCGTCTTCCTTACAATAAGTAAAGAAGAGCCAGAAACTGTAAGAAATGACTTCCTCTGGCCAGATATATTTCAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147308.2 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGCTACACATGTGAACTaGTTCTTTGCATTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAATHVN*FFAFFL Trigger: CAAGAAGAATGCAAAGAACAAGTTCACATGTGTAGC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCTTCAAAACTAAAGCTTaGGTTCTTGGGTCAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAFKTKA*VLGSTI Trigger: GATGGTTGACCCAAGAACCAAAGCTTTAGTTTTGAA...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCTCATTTTCATTTTCTaGGCGTTGTTCAACTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMALIFIF*ALFNCC Trigger: GCAACAGTTGAACAACGCCAAGAAAATGAAAATGAG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCGTTAAGAACAAACCCTaGGGTTTTCTTGCTATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAVKNKP*GFLAIV Trigger: AACTATAGCAAGAAAACCCAAGGGTTTGTTCTTAAC...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCCAAGCAATGGCTTTTTaGTATATGTCAGAGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMAQAMAF*YMSESS Trigger: AGATGACTCTGACATATACAAAAAAGCCATTGCTTG...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAGAAACAACAATTGGTaGCTTGATACTTGTGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMARNNNW*LDTCGN Trigger: GTTACCACAAGTATCAAGCAACCAATTGTTGTTTCT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTAAACATTAAGTACAACATGTCTCTTTGTCATGGCACAGCCATGGCCAGTCCGTGTTGTTATTaGTTTCCTTGTCTTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTVNIKYNMSLCHGTAMASPCCY*FPCLFQ Trigger: CTGAAAAAGACAAGGAAACAAATAACAACACGGACT...GGCCATGGCTGTGCCATGACAAAGAGACATGTTGTACTTAATGTTTACTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS GCA 72 bp | CTGGGGTTGACGAGGATTCCAGACACCAGATCTGTGTaGCCATGCAGAATGTGCACACACTCTTCTGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLTRIPDTRSV*PCRMCTHSSVV Trigger: GACCACAGAAGAGTGTGTGCACATTCTGCATGGGCACACAGATCTGGTGTCTGGAATCCTCGTCAACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
||
| CDS GCA 72 bp | CCTCCAAAGGCGGATTTTGCCGTCCATGTGACCAGATaGAATGCAATCTTCCTTCGGGTGGCAGGCTACACA | + |
|
Preference number: 6 (lower is better) Translates to: PPKADFAVHVTR*NAIFLRVAGYT Trigger: TGTGTAGCCTGCCACCCGAAGGAAGATTGCATTGCATCTGGTCACATGGACGGCAAAATCCGCCTTTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS TCA 72 bp | AGGAACAAGAGTAGAGCTGCAGATGGTTGCTGGGGTTaGCGAGGATTCCAGACACCAGATCTGTGTGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RNKSRAADGCWG*RGFQTPDLCAH Trigger: ATGGGCACACAGATCTGGTGTCTGGAATCCTCGTCAACCCCAGCAACCATCTGCAGCTCTACTCTTGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
||
| CDS GCA 72 bp | TTGACGAGGATTCCAGACACCAGATCTGTGTGCCCATaGAGAATGTGCACACACTCTTCTGTGGTCGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LTRIPDTRSVCP*RMCTHSSVVVL Trigger: TAGCACGACCACAGAAGAGTGTGTGCACATTCTGCATGGGCACACAGATCTGGTGTCTGGAATCCTCGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
||
| CDS TCA 72 bp | ACTGAGATCTGTTCAGCCACTGGTGCGTTTCTGACGTaGATGATTCTGGGACATCTCGTGGGACAAACACTC | + |
|
Preference number: 6 (lower is better) Translates to: TEICSATGAFLT*MILGHLVGQTL Trigger: GAGTGTTTGTCCCACGAGATGTCCCAGAATCATTCACGTCAGAAACGCACCAGTGGCTGAACAGATCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CAA 72 bp | CCAGCTCATTTTCATTTTCTTGGCGTTGTTCAACTGTaGCCAACCAAGTCCCAGAGCAGCCAAAGGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PAHFHFLGVVQL*PTKSQSSQRQP Trigger: AGGCTGCCTTTGGCTGCTCTGGGACTTGGTTGGCAACAGTTGAACAACGCCAAGAAAATGAAAATGAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CAA 90 bp | CCACAGTTTCATTTGCAGCTCCAGCTCATTTTCATTTTCTTGGCGTaGTTCAACTGTTGCCAACCAAGTCCCAGAGCAGCCAAAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PQFHLQLQLIFIFLA*FNCCQPSPRAAKGS Trigger: GCTGCCTTTGGCTGCTCTGGGACTTGGTTGGCAACAGTTGAACAACGCCAAGAAAATGAAAATGAGCTGGAGCTGCAAATGAAACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS GCA 72 bp | CAGCTCATTTTCATTTTCTTGGCGTTGTTCAACTGTTaGCAACCAAGTCCCAGAGCAGCCAAAGGCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLIFIFLALFNC*QPSPRAAKGSL Trigger: AAGGCTGCCTTTGGCTGCTCTGGGACTTGGTTGGCAACAGTTGAACAACGCCAAGAAAATGAAAATGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
||
| CDS CAA 72 bp | CATTTGCAGCTCCAGCTCATTTTCATTTTCTTGGCGTaGTTCAACTGTTGCCAACCAAGTCCCAGAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLQLQLIFIFLA*FNCCQPSPRAA Trigger: GGCTGCTCTGGGACTTGGTTGGCAACAGTTGAACAACGCCAAGAAAATGAAAATGAGCTGGAGCTGCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 90 bp | TTTGCAGCTCCAGCTCATTTTCATTTTCTTGGCGTTGTTCAACTGTaGCCAACCAAGTCCCAGAGCAGCCAAAGGCAGCCTTTGTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: FAAPAHFHFLGVVQL*PTKSQSSQRQPLLV Trigger: AACTAACAAAGGCTGCCTTTGGCTGCTCTGGGACTTGGTTGGCAACAGTTGAACAACGCCAAGAAAATGAAAATGAGCTGGAGCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS TCA 72 bp | TGTGCACACACTCTTCTGTGGTCGTGCTATAGACCTTaGCAAAGTCTCCCGAGACACAGAAGATATACTTGG | + |
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Preference number: 6 (lower is better) Translates to: CAHTLLWSCYRP*QSLPRHRRYTW Trigger: CCAAGTATATCTTCTGTGTCTCGGGAGACTTTGTCAAGGTCTATAGCACGACCACAGAAGAGTGTGTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
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| CDS GCA 72 bp | TCTGATCACTGTGAAAGTTCCTCCAAAGGCGGATTTTaGCGTCCATGTGACCAGATGCAATGCAATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SDHCESSSKGGF*RPCDQMQCNLP Trigger: AGGAAGATTGCATTGCATCTGGTCACATGGACGGCAAAATCCGCCTTTGGAGGAACTTTCACAGTGATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 72 bp | GAACAACTGAGCAGATTCCAACAGCAGAGAATGCCATaGTCAGTAGTGCCGAGGAGATACTTTGAGCATGTC | + |
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Preference number: 6 (lower is better) Translates to: EQLSRFQQQRMP*SVVPRRYFEHV Trigger: GACATGCTCAAAGTATCTCCTCGGCACTACTGACAATGGCATTCTCTGCTGTTGGAATCTGCTCAGTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 90 bp | CACTGTATTGAACAACTGAGCAGATTCCAACAGCAGAGAATGCCATaGTCAGTAGTGCCGAGGAGATACTTTGAGCATGTCAGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HCIEQLSRFQQQRMP*SVVPRRYFEHVSLP Trigger: TGGAAGACTGACATGCTCAAAGTATCTCCTCGGCACTACTGACAATGGCATTCTCTGCTGTTGGAATCTGCTCAGTTGTTCAATACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS TCA 72 bp | GAGAATGCCATTGTCAGTAGTGCCGAGGAGATACTTTaGGCATGTCAGTCTTCCAAAGCAAAGGTGCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: ENAIVSSAEEIL*ACQSSKAKVPY Trigger: ATAAGGCACCTTTGCTTTGGAAGACTGACATGCTCAAAGTATCTCCTCGGCACTACTGACAATGGCATTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS TCA 72 bp | ACTCCCCACTGGACTTCCTCTCTGGAGACATTCTTCTaGATATACAATGGCCTTGGCTCGCTAGGTTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: TPHWTSSLETFF*IYNGLGSLGLN Trigger: ATTTAAACCTAGCGAGCCAAGGCCATTGTATATTCAGAAGAATGTCTCCAGAGAGGAAGTCCAGTGGGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 90 bp | GTGGTCATCATGTGGCATGGCGATCTTTGTGTTAAGAACAAACCCTaGGGTTTTCTTGCTATAGTTCCACAGTTTCATTTGCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VVIMWHGDLCVKNKP*GFLAIVPQFHLQLQ Trigger: CTGGAGCTGCAAATGAAACTGTGGAACTATAGCAAGAAAACCCAAGGGTTTGTTCTTAACACAAAGATCGCCATGCCACATGATGACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS TCA 72 bp | TGGCTTGTTGATTTGGGCAGCTTCACTGACACCAGCTaGAATATATCTGGCCAGAGGAAGTCATTTCTTACA | + |
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Preference number: 6 (lower is better) Translates to: WLVDLGSFTDTS*NISGQRKSFLT Trigger: TGTAAGAAATGACTTCCTCTGGCCAGATATATTTCAGCTGGTGTCAGTGAAGCTGCCCAAATCAACAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147308.2 |
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| CDS GCA 72 bp | GCTAGCTGTGACCAGGATGGGTTTTTCATAGCTTTCTaGATTATTGAAACAGAGAGCTGTGATGTGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: ASCDQDGFFIAF*IIETESCDVVI Trigger: GATGACCACATCACAGCTCTCTGTTTCAATAATGCAGAAAGCTATGAAAAACCCATCCTGGTCACAGCTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS GCA 72 bp | TATGAAAGAAAATGGGGTCGTTGGCAAACTTTCTTCTaGCAGCAGCTGTTTGCTTGTTGGTGTGAGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: YERKWGRWQTFF*QQLFACWCEFL Trigger: GAGAAACTCACACCAACAAGCAAACAGCTGCTGGCAGAAGAAAGTTTGCCAACGACCCCATTTTCTTTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CCA 72 bp | ACGGAATCTTCCGCGTGGAGAGGAATAAAGAAGGCGTaGAGTTTAGGTCCAATAGTGAAAGTCTTTATCAGA | + |
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Preference number: 6 (lower is better) Translates to: TESSAWRGIKKA*SLGPIVKVFIR Trigger: TCTGATAAAGACTTTCACTATTGGACCTAAACTCCACGCCTTCTTTATTCCTCTCCACGCGGAAGATTCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027139.15 ENSMUST00000147308.2 |
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| CDS CCA 72 bp | ATGTCAGAGTCATCTGTTAATATCCACACTTTGAAGTaGCCATCTCTGCTAGCTGTGACCAGGATGGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: MSESSVNIHTLK*PSLLAVTRMGF Trigger: AAAACCCATCCTGGTCACAGCTAGCAGAGATGGCCACTTCAAAGTGTGGATATTAACAGATGACTCTGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CCA 72 bp | TGGCAAACTTTCTTCTGCCAGCAGCTGTTTGCTTGTTaGTGTGAGTTTCTCTTCTGGAGACTTTGTACTGAA | + |
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Preference number: 6 (lower is better) Translates to: WQTFFCQQLFAC*CEFLFWRLCTE Trigger: TTCAGTACAAAGTCTCCAGAAGAGAAACTCACACCAACAAGCAAACAGCTGCTGGCAGAAGAAAGTTTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 72 bp | TGCTCAATAGAAGATCCTAATCGAGGAAGAAACTCTTaGTTCTTCTCTGATCCATCTCGCCACTCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: CSIEDPNRGRNS*FFSDPSRHSTS Trigger: GCTTGTGGAGTGGCGAGATGGATCAGAGAAGAACAAAGAGTTTCTTCCTCGATTAGGATCTTCTATTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS GCA 72 bp | CTGCAGCAACGTATTCTCCCTCATTTCCAAAGGCAATaGACTTGGGGGACCTATTTATGTAATCCAAAACAA | + |
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Preference number: 6 (lower is better) Translates to: LQQRILPHFQRQ*TWGTYLCNPKQ Trigger: TTGTTTTGGATTACATAAATAGGTCCCCCAAGTGCATTGCCTTTGGAAATGAGGGAGAATACGTTGCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS TCA 72 bp | TGGCTTGTTGATTTGGGCAGCTTCACTGACACCAGCTaGAATATATCTGGCTCTTCTTTACTTATTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: WLVDLGSFTDTS*NISGSSLLIVR Trigger: CCTTACAATAAGTAAAGAAGAGCCAGATATATTTCAGCTGGTGTCAGTGAAGCTGCCCAAATCAACAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CCA 72 bp | ATTATTGAAACAGAGAGCTGTGATGTGGTCATCATGTaGCATGGCGATCTTTGTGTTAAGAACAAACCCTTG | + |
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Preference number: 6 (lower is better) Translates to: IIETESCDVVIM*HGDLCVKNKPL Trigger: CAAGGGTTTGTTCTTAACACAAAGATCGCCATGCCACATGATGACCACATCACAGCTCTCTGTTTCAATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 72 bp | ATGTGGCATGGCGATCTTTGTGTTAAGAACAAACCCTaGGGTTTTCTTGCTATAGTTCCACAGTTTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: MWHGDLCVKNKP*GFLAIVPQFHL Trigger: CAAATGAAACTGTGGAACTATAGCAAGAAAACCCAAGGGTTTGTTCTTAACACAAAGATCGCCATGCCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 90 bp | CCAAAGGCAGCCTTTGTTAGTTCAGTTTGGGTTAGACCCTCATCATaGATGTACTCTTGCTGTATGATATCTAGATTGTATAACTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: PKAAFVSSVWVRPSS*MYSCCMISRLYNCL Trigger: TAAGCAGTTATACAATCTAGATATCATACAGCAAGAGTACATCAATGATGAGGGTCTAACCCAAACTGAACTAACAAAGGCTGCCTTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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| CDS CAA 72 bp | GCCTTTGTTAGTTCAGTTTGGGTTAGACCCTCATCATaGATGTACTCTTGCTGTATGATATCTAGATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: AFVSSVWVRPSS*MYSCCMISRLY Trigger: ATACAATCTAGATATCATACAGCAAGAGTACATCAATGATGAGGGTCTAACCCAAACTGAACTAACAAAGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027139.15 |
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