Pregenerated sensors for WDR74 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042729Ensembl transcript IDs: ENSMUST00000049424.11, ENSMUST00000210512.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTGCCATCCGCCTGGGCGAGACCTCGGAACGTGCCTTCCCCGCCTaGGCAGTATCTCTGGCTCAGGAATGTACCCTCCTCAGCATTAAA | + |
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Preference number: 5 (lower is better) Translates to: GAIRLGETSERAFPA*AVSLAQECTLLSIK Trigger: TTTAATGCTGAGGAGGGTACATTCCTGAGCCAGAGATACTGCCCAGGCGGGGAAGGCACGTTCCGAGGTCTCGCCCAGGCGGATGGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 90 bp | CTGAGGATCCCAGAATCCACACATGTGATAAGGGTGCCATCCGCCTaGGCGAGACCTCGGAACGTGCCTTCCCCGCCTGGGCAGTATCTC | + |
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Preference number: 5 (lower is better) Translates to: LRIPESTHVIRVPSA*ARPRNVPSPPGQYL Trigger: GAGATACTGCCCAGGCGGGGAAGGCACGTTCCGAGGTCTCGCCCAGGCGGATGGCACCCTTATCACATGTGTGGATTCTGGGATCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 90 bp | GCATTAAAGTACCTCACGGTTCTGTCCGCACAGCCCACCAAGATTTaGGTCTCGCCGCCAGTGCCCCAGCACAGAGCATTCACTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ALKYLTVLSAQPTKI*VSPPVPQHRAFTAS Trigger: GGAGGCAGTGAATGCTCTGTGCTGGGGCACTGGCGGCGAGACCCAAATCTTGGTGGGCTGTGCGGACAGAACCGTGAGGTACTTTAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 90 bp | GGGAGACTGGATCATAGACACGGACCTGGTGGTACCCTGTGCATGTaGCAAGTTTCTGTGACCCAGGGAGGAACTGTGTATCTTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GRLDHRHGPGGTLCM*QVSVTQGGTVYLGP Trigger: GGGACCAAGATACACAGTTCCTCCCTGGGTCACAGAAACTTGTCACATGCACAGGGTACCACCAGGTCCGTGTCTATGATCCAGTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 90 bp | CCCAGTAGACGCCCTTGCCGAAAATCAATTTCTGCCAGCTGCCCATaGGTGTTCCCTACGATGACGGAATTGCCCTCAGGAGTAAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: PSRRPCRKSISASCP*VFPTMTELPSGVRV Trigger: GACCCTTACTCCTGAGGGCAATTCCGTCATCGTAGGGAACACTCATGGGCAGCTGGCAGAAATTGATTTTCGGCAAGGGCGTCTACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 90 bp | AAGACTCTGTCCAAGCCACATGAGGCTAATAGGGGCTTTGAAGGGTaGCACTGCAGCCCACGAACACTACCTGCAAGCCCCTTCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: KTLSKPHEANRGFEG*HCSPRTLPASPFRQ Trigger: CTGTCTGAAGGGGCTTGCAGGTAGTGTTCGTGGGCTGCAGTGTCACCCTTCAAAGCCCCTATTAGCCTCATGTGGCTTGGACAGAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 90 bp | AGGCCCAAAGTTCATCTGTCTCTGTGTCTTCTGAGGGTACTTGGTTaGGCTCTTGAGGTTCTTGGGGCTCATCCTCCCAGTTATCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: RPKVHLSLCLLRVLG*ALEVLGAHPPSYPG Trigger: GCCGGGATAACTGGGAGGATGAGCCCCAAGAACCTCAAGAGCCCAACCAAGTACCCTCAGAAGACACAGAGACAGATGAACTTTGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 90 bp | TTTGGAGAGCACCTTGTGTCTGGTCCAAATCTGGGAGCTTCCGCTTaGCAGCTGCCTCCAAAGAGGCCCAAAGTTCATCTGTCTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: FGEHLVSGPNLGASA*QLPPKRPKVHLSLC Trigger: ACACAGAGACAGATGAACTTTGGGCCTCTTTGGAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACACAAGGTGCTCTCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 90 bp | CCCAGTTATCCCGGCCTGACAGGAGAAGGCAGTTCAGTTGAGACTTaGGATAAACCTTATGCTCTAGCCCACGTGGATTGCGGATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: PSYPGLTGEGSSVET*DKPYALAHVDCGSC Trigger: ACAGGATCCGCAATCCACGTGGGCTAGAGCATAAGGTTTATCTCAAGTCTCAACTGAACTGCCTTCTCCTGTCAGGCCGGGATAACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 90 bp | CTTTTTCTTCCTTCTTTGGAGAGCACCTTGTGTCTGGTCCAAATCTaGGAGCTTCCGCTTGGCAGCTGCCTCCAAAGAGGCCCAAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LFLPSLESTLCLVQI*ELPLGSCLQRGPKF Trigger: GAACTTTGGGCCTCTTTGGAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACACAAGGTGCTCTCCAAAGAAGGAAGAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 90 bp | ATAGACACGGACCTGGTGGTACCCTGTGCATGTGACAAGTTTCTGTaGCCCAGGGAGGAACTGTGTATCTTGGTCCCAAATAGGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: IDTDLVVPCACDKFL*PREELCILVPNRNS Trigger: CGAGTTCCTATTTGGGACCAAGATACACAGTTCCTCCCTGGGTCACAGAAACTTGTCACATGCACAGGGTACCACCAGGTCCGTGTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 90 bp | TCAAAGCATTTTCTTTCCCACATGTGGCAACCACATGTGTATGTGTaGGATCTTGGCGCATCCTACACACCCCAGGACCCACCTTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: SKHFLSHMWQPHVYV*DLGASYTPQDPPSV Trigger: AACTGAAGGTGGGTCCTGGGGTGTGTAGGATGCGCCAAGATCCCACACATACACATGTGGTTGCCACATGTGGGAAAGAAAATGCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS CCA 90 bp | AACTCGGAGATCAAGCCAATCATTCCGCACCTTCAGTTCCAAGAGTaGGTCAGAGGACGCCTCTTTGTCATTTTCACACCAGACTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NSEIKPIIPHLQFQE*VRGRLFVIFTPDSE Trigger: CTCAGAGTCTGGTGTGAAAATGACAAAGAGGCGTCCTCTGACCCACTCTTGGAACTGAAGGTGCGGAATGATTGGCTTGATCTCCGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210512.2 |
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| CDS CCA 90 bp | GTGCATGTGACAAGTTTCTGTGACCCAGGGAGGAACTGTGTATCTTaGTCCCAAATAGGAACTCGGAGATCAAGCCAATCATTCCGCACC | + |
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Preference number: 5 (lower is better) Translates to: VHVTSFCDPGRNCVS*SQIGTRRSSQSFRT Trigger: GGTGCGGAATGATTGGCTTGATCTCCGAGTTCCTATTTGGGACCAAGATACACAGTTCCTCCCTGGGTCACAGAAACTTGTCACATGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210512.2 |
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| CDS CCA 90 bp | GTGCATGTGACAAGTTTCTGTGACCCAGGGAGGAACTGTGTATCTTaGTCCCAAATAGGAACTCGGAGATCAAGCCAATCATTCCGCACA | + |
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Preference number: 5 (lower is better) Translates to: VHVTSFCDPGRNCVS*SQIGTRRSSQSFRT Trigger: TGTGCGGAATGATTGGCTTGATCTCCGAGTTCCTATTTGGGACCAAGATACACAGTTCCTCCCTGGGTCACAGAAACTTGTCACATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS CCA 90 bp | ACCCCTGTAGGTCCCATACTTTCAAAGCATTTTCTTTCCCACATGTaGCAACCACATGTGTATGTGTGGGATCTTGGCGCATCCTACACA | + |
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Preference number: 5 (lower is better) Translates to: TPVGPILSKHFLSHM*QPHVYVWDLGASYT Trigger: TGTGTAGGATGCGCCAAGATCCCACACATACACATGTGGTTGCCACATGTGGGAAAGAAAATGCTTTGAAAGTATGGGACCTACAGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS CCA 72 bp | CGCCTGGGCGAGACCTCGGAACGTGCCTTCCCCGCCTaGGCAGTATCTCTGGCTCAGGAATGTACCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RLGETSERAFPA*AVSLAQECTLL Trigger: GAGGAGGGTACATTCCTGAGCCAGAGATACTGCCCAGGCGGGGAAGGCACGTTCCGAGGTCTCGCCCAGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 72 bp | CCAGAATCCACACATGTGATAAGGGTGCCATCCGCCTaGGCGAGACCTCGGAACGTGCCTTCCCCGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PESTHVIRVPSA*ARPRNVPSPPG Trigger: CCCAGGCGGGGAAGGCACGTTCCGAGGTCTCGCCCAGGCGGATGGCACCCTTATCACATGTGTGGATTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS GCA 72 bp | GCTGAAGGTTCACCCCTTTCAGGATGCCGGTCTCAGTaGCGACCCACACATGGTTCCAGCGAGCCGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: AEGSPLSGCRSQ*RPTHGSSEPRQ Trigger: CTGCCTCGGCTCGCTGGAACCATGTGTGGGTCGGCACTGAGACCGGCATCCTGAAAGGGGTGAACCTTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 72 bp | TACCTCACGGTTCTGTCCGCACAGCCCACCAAGATTTaGGTCTCGCCGCCAGTGCCCCAGCACAGAGCATTC | + |
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Preference number: 6 (lower is better) Translates to: YLTVLSAQPTKI*VSPPVPQHRAF Trigger: GAATGCTCTGTGCTGGGGCACTGGCGGCGAGACCCAAATCTTGGTGGGCTGTGCGGACAGAACCGTGAGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 72 bp | GTACCTCACGGTTCTGTCCGCACAGCCCACCAAGATTaGGGTCTCGCCGCCAGTGCCCCAGCACAGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VPHGSVRTAHQD*GLAASAPAQSI Trigger: AATGCTCTGTGCTGGGGCACTGGCGGCGAGACCCAAATCTTGGTGGGCTGTGCGGACAGAACCGTGAGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS GCA 72 bp | CCGCATGTTTCCGCTGAAGGTTCACCCCTTTCAGGATaGCGGTCTCAGTGCCGACCCACACATGGTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PHVSAEGSPLSG*RSQCRPTHGSS Trigger: GCTGGAACCATGTGTGGGTCGGCACTGAGACCGGCATCCTGAAAGGGGTGAACCTTCAGCGGAAACATGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 90 bp | AGCATTAAAGTACCTCACGGTTCTGTCCGCACAGCCCACCAAGATTaGGGTCTCGCCGCCAGTGCCCCAGCACAGAGCATTCACTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SIKVPHGSVRTAHQD*GLAASAPAQSIHCL Trigger: GAGGCAGTGAATGCTCTGTGCTGGGGCACTGGCGGCGAGACCCAAATCTTGGTGGGCTGTGCGGACAGAACCGTGAGGTACTTTAATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 72 bp | TCCAAGCCACATGAGGCTAATAGGGGCTTTGAAGGGTaGCACTGCAGCCCACGAACACTACCTGCAAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SKPHEANRGFEG*HCSPRTLPASP Trigger: GGGGCTTGCAGGTAGTGTTCGTGGGCTGCAGTGTCACCCTTCAAAGCCCCTATTAGCCTCATGTGGCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 72 bp | CCTTCTTTGGAGAGCACCTTGTGTCTGGTCCAAATCTaGGAGCTTCCGCTTGGCAGCTGCCTCCAAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PSLESTLCLVQI*ELPLGSCLQRG Trigger: GCCTCTTTGGAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACACAAGGTGCTCTCCAAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 90 bp | GGTGGATCCAGGCCGCTTCTTTTTCTTCCTTCTTTGGAGAGCACCTaGTGTCTGGTCCAAATCTGGGAGCTTCCGCTTGGCAGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GGSRPLLFLPSLEST*CLVQIWELPLGSCL Trigger: GAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACACAAGGTGCTCTCCAAAGAAGGAAGAAAAAGAAGCGGCCTGGATCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 72 bp | GCACCTTGTGTCTGGTCCAAATCTGGGAGCTTCCGCTaGGCAGCTGCCTCCAAAGAGGCCCAAAGTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: APCVWSKSGSFR*AAASKEAQSSS Trigger: AGATGAACTTTGGGCCTCTTTGGAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACACAAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 90 bp | GTATCCTCAAGACTCTGTCCAAGCCACATGAGGCTAATAGGGGCTTaGAAGGGTGACACTGCAGCCCACGAACACTACCTGCAAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: VSSRLCPSHMRLIGA*KGDTAAHEHYLQAP Trigger: AGGGGCTTGCAGGTAGTGTTCGTGGGCTGCAGTGTCACCCTTCAAAGCCCCTATTAGCCTCATGTGGCTTGGACAGAGTCTTGAGGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 90 bp | CTTTGGAGAGCACCTTGTGTCTGGTCCAAATCTGGGAGCTTCCGCTaGGCAGCTGCCTCCAAAGAGGCCCAAAGTTCATCTGTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LWRAPCVWSKSGSFR*AAASKEAQSSSVSV Trigger: CACAGAGACAGATGAACTTTGGGCCTCTTTGGAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACACAAGGTGCTCTCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 72 bp | CGCCCTTGCCGAAAATCAATTTCTGCCAGCTGCCCATaGGTGTTCCCTACGATGACGGAATTGCCCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RPCRKSISASCP*VFPTMTELPSG Trigger: TCCTGAGGGCAATTCCGTCATCGTAGGGAACACTCATGGGCAGCTGGCAGAAATTGATTTTCGGCAAGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS GCA 72 bp | TGTCTGGTCCAAATCTGGGAGCTTCCGCTTGGCAGCTaGCTCCAAAGAGGCCCAAAGTTCATCTGTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: CLVQIWELPLGS*LQRGPKFICLC Trigger: ACAGAGACAGATGAACTTTGGGCCTCTTTGGAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 72 bp | AGACTCTGTCCAAGCCACATGAGGCTAATAGGGGCTTaGAAGGGTGACACTGCAGCCCACGAACACTACCTG | + |
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Preference number: 6 (lower is better) Translates to: RLCPSHMRLIGA*KGDTAAHEHYL Trigger: CAGGTAGTGTTCGTGGGCTGCAGTGTCACCCTTCAAAGCCCCTATTAGCCTCATGTGGCTTGGACAGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 72 bp | AGGTTCTTGGGGCTCATCCTCCCAGTTATCCCGGCCTaGCAGGAGAAGGCAGTTCAGTTGAGACTTGAGATA | + |
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Preference number: 6 (lower is better) Translates to: RFLGLILPVIPA*QEKAVQLRLEI Trigger: TATCTCAAGTCTCAACTGAACTGCCTTCTCCTGTCAGGCCGGGATAACTGGGAGGATGAGCCCCAAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 72 bp | TTTCTTTCCCACATGTGGCAACCACATGTGTATGTGTaGGATCTTGGCGCATCCTACACACCCCAGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: FLSHMWQPHVYV*DLGASYTPQDP Trigger: TGGGTCCTGGGGTGTGTAGGATGCGCCAAGATCCCACACATACACATGTGGTTGCCACATGTGGGAAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS CCA 72 bp | GTTCATCTGTCTCTGTGTCTTCTGAGGGTACTTGGTTaGGCTCTTGAGGTTCTTGGGGCTCATCCTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VHLSLCLLRVLG*ALEVLGAHPPS Trigger: ACTGGGAGGATGAGCCCCAAGAACCTCAAGAGCCCAACCAAGTACCCTCAGAAGACACAGAGACAGATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 72 bp | GGAACTCGGAGATCAAGCCAATCATTCCGCACATTTTaGGCCCTGAATACAGGCTCCTCAGACCCCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: GTRRSSQSFRTF*ALNTGSSDPCR Trigger: CCTACAGGGGTCTGAGGAGCCTGTATTCAGGGCCAAAAATGTGCGGAATGATTGGCTTGATCTCCGAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS CAA 90 bp | CCAGGACCCACCTTCAGTTCCAAGAGTGGGTCAGAGGACGCCTCTTaGTCATTTTCACACCAGACTCTGAGGATCCCAGAATCCACACAT | + |
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Preference number: 6 (lower is better) Translates to: PGPTFSSKSGSEDAS*SFSHQTLRIPESTH Trigger: ATGTGTGGATTCTGGGATCCTCAGAGTCTGGTGTGAAAATGACAAAGAGGCGTCCTCTGACCCACTCTTGGAACTGAAGGTGGGTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS TCA 72 bp | GGAGATCAAGCCAATCATTCCGCACATTTTTGGCCCTaGATACAGGCTCCTCAGACCCCTGTAGGTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: GDQANHSAHFWP*IQAPQTPVGPI Trigger: TATGGGACCTACAGGGGTCTGAGGAGCCTGTATTCAGGGCCAAAAATGTGCGGAATGATTGGCTTGATCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS TCA 72 bp | GACCTGGTGGTACCCTGTGCATGTGACAAGTTTCTGTaGCCCAGGGAGGAACTGTGTATCTTGGTCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: DLVVPCACDKFL*PREELCILVPN Trigger: ATTTGGGACCAAGATACACAGTTCCTCCCTGGGTCACAGAAACTTGTCACATGCACAGGGTACCACCAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS TCA 72 bp | GATCATAGACACGGACCTGGTGGTACCCTGTGCATGTaGCAAGTTTCTGTGACCCAGGGAGGAACTGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: DHRHGPGGTLCM*QVSVTQGGTVY Trigger: ATACACAGTTCCTCCCTGGGTCACAGAAACTTGTCACATGCACAGGGTACCACCAGGTCCGTGTCTATGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CAA 90 bp | TCCCAAATAGGAACTCGGAGATCAAGCCAATCATTCCGCACATTTTaGGCCCTGAATACAGGCTCCTCAGACCCCTGTAGGTCCCATACT | + |
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Preference number: 6 (lower is better) Translates to: SQIGTRRSSQSFRTF*ALNTGSSDPCRSHT Trigger: AGTATGGGACCTACAGGGGTCTGAGGAGCCTGTATTCAGGGCCAAAAATGTGCGGAATGATTGGCTTGATCTCCGAGTTCCTATTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049424.11 |
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| CDS CAA 90 bp | TCATTCCGCACCTTCAGTTCCAAGAGTGGGTCAGAGGACGCCTCTTaGTCATTTTCACACCAGACTCTGAGGATCCCAGAATCCACACAT | + |
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Preference number: 6 (lower is better) Translates to: SFRTFSSKSGSEDAS*SFSHQTLRIPESTH Trigger: ATGTGTGGATTCTGGGATCCTCAGAGTCTGGTGTGAAAATGACAAAGAGGCGTCCTCTGACCCACTCTTGGAACTGAAGGTGCGGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210512.2 |
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| CDS CAA 72 bp | ACCTTCAGTTCCAAGAGTGGGTCAGAGGACGCCTCTTaGTCATTTTCACACCAGACTCTGAGGATCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: TFSSKSGSEDAS*SFSHQTLRIPE Trigger: TTCTGGGATCCTCAGAGTCTGGTGTGAAAATGACAAAGAGGCGTCCTCTGACCCACTCTTGGAACTGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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| CDS CCA 72 bp | ACAAGTTTCTGTGACCCAGGGAGGAACTGTGTATCTTaGTCCCAAATAGGAACTCGGAGATCAAGCCAATCA | + |
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Preference number: 6 (lower is better) Translates to: TSFCDPGRNCVS*SQIGTRRSSQS Trigger: TGATTGGCTTGATCTCCGAGTTCCTATTTGGGACCAAGATACACAGTTCCTCCCTGGGTCACAGAAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049424.11 ENSMUST00000210512.2 |
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