Pregenerated sensors for WDR73 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025722Ensembl transcript IDs: ENSMUST00000026816.15, ENSMUST00000146402.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACTTCTTGGTGCCTATACTCATGAGTGTGCACACCCAAGCACGTaGACCCTCGTGCAAGTAATGAACACGAACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: ALLGAYTHECAHPST*TLVQVMNTNTHTHT Trigger: TGTGTGTGTGTGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACACTCATGAGTATAGGCACCAAGAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR GCA 90 bp | TTCATTTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTaGCTGAAGCCAACGGCTGTGGTAGAGCTGTGTTCACTCACAGTC | + |
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Preference number: 1 (lower is better) Translates to: FILQVRKRDKKGRLA*LKPTAVVELCSLTV Trigger: GACTGTGAGTGAACACAGCTCTACCACAGCCGTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAAATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR CAA 90 bp | CTTCATTTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTaGCCTGAAGCCAACGGCTGTGGTAGAGCTGTGTTCACTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: LHFTGKKKGQEGQAS*PEANGCGRAVFTHS Trigger: ACTGTGAGTGAACACAGCTCTACCACAGCCGTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAAATGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR TCA 72 bp | CTCCACCTTCCCAGCACTTCTTGGTGCCTATACTCATaGGTGTGCACACCCAAGCACGTGCACCCTCGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LHLPSTSWCLYS*VCTPKHVHPRA Trigger: TGCACGAGGGTGCACGTGCTTGGGTGTGCACACTCATGAGTATAGGCACCAAGAAGTGCTGGGAAGGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR TCA 72 bp | CAAGGTGCATCCTTTAGCAAAGCAGAGGCCTCGGGATaGCTCCACCTTCCCAGCACTTCTTGGTGCCTATAC | + |
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Preference number: 3 (lower is better) Translates to: QGASFSKAEASG*LHLPSTSWCLY Trigger: GTATAGGCACCAAGAAGTGCTGGGAAGGTGGAGTCATCCCGAGGCCTCTGCTTTGCTAAAGGATGCACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR TCA 72 bp | CACACTCCAGCTCTCCTGATTCTCACCATGATGCTGTaGAGACAGGAACACAGCCTGCTGCTATACACCTGG | + |
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Preference number: 3 (lower is better) Translates to: HTPALLILTMML*RQEHSLLLYTW Trigger: CCAGGTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATCAGGAGAGCTGGAGTGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR GCA 72 bp | CAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTaGCTGAAGCCAACGGCTGTGGTAGAGCTGTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: QVRKRDKKGRLA*LKPTAVVELCS Trigger: TGAACACAGCTCTACCACAGCCGTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR GCA 72 bp | GGTGCCTATACTCATGAGTGTGCACACCCAAGCACGTaGACCCTCGTGCAAGTAATGAACACGAACACACAC | + |
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Preference number: 3 (lower is better) Translates to: GAYTHECAHPST*TLVQVMNTNTH Trigger: GTGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACACTCATGAGTATAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR TCA 72 bp | CTTCTTACTTGTATTCTTTTTGATGTTTATTGGCCCTaGGACATCGATTCCTTCTGTGAGAAAGTTCACACC | + |
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Preference number: 3 (lower is better) Translates to: LLTCILFDVYWP*DIDSFCEKVHT Trigger: GGTGTGAACTTTCTCACAGAAGGAATCGATGTCTCAGGGCCAATAAACATCAAAAAGAATACAAGTAAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | GTGTGCACACCCAAGCACGTGCACCCTCGTGCAAGTAATGAACACGAACACACACAGGGCCCAGGGCCTTaGCCCTTGTTCCTGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VCTPKHVHPRASNEHEHTQGPGP*PLFLTS Trigger: AGAAGTCAGGAACAAGGGCCAAGGCCCTGGGCCCTG...TGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR CAA 72 bp | AGAGGCCTCGGGATGACTCCACCTTCCCAGCACTTCTaGGTGCCTATACTCATGAGTGTGCACACCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGLGMTPPSQHF*VPILMSVHTQA Trigger: TGCTTGGGTGTGCACACTCATGAGTATAGGCACCAAGAAGTGCTGGGAAGGTGGAGTCATCCCGAGGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | CACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCATGAGGGCGACTCGAGTGGCTCCTaGGAGGTCAAATGCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: HSPCQPLKQLLFSEAHEGDSSGS*EVKCME Trigger: TTCCATGCATTTGACCTCTCAGGAGCCACTCGAGTC...GCCCTCATGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | GTTCACTCACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCAGCCAGGTATGGGTGGTaGCCAGAGGAGCAGAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: VHSQSMSASQTTPLLRGPARYGW*PEEQSL Trigger: TAGACTCTGCTCCTCTGGTCACCACCCATACCTGGC...TGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTGAGTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | GTGTGCACACCCAAGCACGTGCACCCTCGTGCAAGTAATGAACACGAACACACATCAAGGAGACAGAGCTaGCCATCTGAGCCAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCTPKHVHPRASNEHEHTSRRQS*PSEPRL Trigger: CAGCCTTGGCTCAGATGGGCAGCTCTGTCTCCTTGA...TGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACAACGCTGCCCACTTCTaGCGGGTGTCCACAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANNAAHF*RVSTSP Trigger: GGGGCTTGTGGACACCCGCCAGAAGTGGGCAGCGTT...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACCATCTGAGCCAAGGCTaGCAATGCAGGGCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANHLSQG*QCRAQG Trigger: GCCCTGGGCCCTGCATTGCCAGCCTTGGCTCAGATG...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | GATTCTCACCATGATGCTGTGAAGACAGGAACACAGCCTGCTGCTATACACCTGCACCCGCAGCAGCTCTaGGTCAGGGCTGGGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: DSHHDAVKTGTQPAAIHLHPQQL*VRAGFE Trigger: TTCAAACCCAGCCCTGACCCAGAGCTGCTGCGGGTG...CAGGTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | GTGTGCACACCCAAGCACGTGCACCCTCGTGCAAGTAATGAACACGAACACACACTCCATGGCGTACTTTaGAGTCCCTCTCTGGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: VCTPKHVHPRASNEHEHTLHGVL*SPSLGV Trigger: TACACCCAGAGAGGGACTTCAAAGTACGCCATGGAG...TGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | CCTGATTCTCACCATGATGCTGTGAAGACAGGAACACAGCCTGCTGCTATACACTGTGGCCTTTGTGAGTaGAGAGAGGCTCCGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PDSHHDAVKTGTQPAAIHCGLCE*REAPLG Trigger: CCCAAGCGGAGCCTCTCTTCACTCACAAAGGCCACA...GTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| 3UTR CAA 72 bp | ACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTaGCCTGAAGCCAACGGCTGTGGTAGAGCTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TGKKKGQEGQAS*PEANGCGRAVF Trigger: GAACACAGCTCTACCACAGCCGTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | GTTCACTCACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCATTTGCGTCTAGGACCTaGAGGCAGCTCAAGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: VHSQSMSASQTTPLLRGPFASRT*RQLKDS Trigger: TGAGTCCTTGAGCTGCCTTCAGGTCCTAGACGCAAA...TGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTGAGTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | GTGTGCACACCCAAGCACGTGCACCCTCGTGCAAGTAATGAACACGAACACACACCAGCCGACCTGAGTTaGCACAGAAAGCAAAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: VCTPKHVHPRASNEHEHTPADLS*HRKQRY Trigger: ATACCTTTGCTTTCTGTGGCAACTCAGGTCGGCTGG...TGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | CACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCATGAGGGCACCCAGTCCCACACATaGAGAGAAGAATCACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: HSPCQPLKQLLFSEAHEGTQSHT*REESLA Trigger: AGCAAGTGATTCTTCTCTGCATGTGTGGGACTGGGT...GCCCTCATGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACGCTGAGCTCACAGGATaGCAGAGATTCCGGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANAELTG*QRFRES Trigger: TGACTCCCGGAATCTCTGTCATCCTGTGAGCTCAGC...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | GATTCTCACCATGATGCTGTGAAGACAGGAACACAGCCTGCTGCTATACACCTGAAGATGTGGCCTTTGTaGGTGAAGAGAGGCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: DSHHDAVKTGTQPAAIHLKMWPL*VKRGSA Trigger: AGCGGAGCCTCTCTTCACTCACAAAGGCCACATCTT...CAGGTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | CCTTCCCAGCACTTCTTGGTGCCTATACTCATGAGTGTGCACACCCAAGCACGTAAGAGAGGCTCCGCTTaGGTTTTCTTTCCATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PSQHFLVPILMSVHTQARKRGSA*VFFPSH Trigger: ATGGGATGGAAAGAAAACCCAAGCGGAGCCTCTCTT...ACGTGCTTGGGTGTGCACACTCATGAGTATAGGCACCAAGAAGTGCTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | CAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACGGCTCCTGTACAGAGAGCCTaGGAGGTAGTATCAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: QVRKRDKKGRLACLKPTAPVQRA*EVVSNE Trigger: TTCATTTGATACTACCTCTCAGGCTCTCTGTACAGG...AGCCGTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | CAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACGGCTAAAGACAGATCTGTCTaGAAATCCTCCATGGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: QVRKRDKKGRLACLKPTAKDRSV*KSSMAY Trigger: GTACGCCATGGAGGATTTTCAGACAGATCTGTCTTT...AGCCGTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACCTTGGCCCTTGTTCCTaGCTTCTGCACACCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANLGPCS*LLHTIS Trigger: AGAGATGGTGTGCAGAAGTCAGGAACAAGGGCCAAG...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | GTTCACTCACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCACTTGTTCCTGACTTCTaGACACCATCTCTCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: VHSQSMSASQTTPLLRGPLVPDF*TPSLST Trigger: AGTGGAGAGAGATGGTGTGCAGAAGTCAGGAACAAG...TGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTGAGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | CCTGATTCTCACCATGATGCTGTGAAGACAGGAACACAGCCTGCTGCTATACACCTGATAACAAAGTTCTaGGTTTGCGAGGGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PDSHHDAVKTGTQPAAIHLITKF*VCEGAR Trigger: CCTGGCACCCTCGCAAACCCAGAACTTTGTTATCAG...GTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | GATTCTCACCATGATGCTGTGAAGACAGGAACACAGCCTGCTGCTATACACCTGTGGTCACCAGCAACCTaGTATCTGGCACATGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: DSHHDAVKTGTQPAAIHLWSPAT*YLAHAL Trigger: TAAAGCATGTGCCAGATACCAGGTTGCTGGTGACCA...CAGGTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACTGTCCCATCAAAGCCTaGAATAGCCAAGCAGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANCPIKA*NSQAVV Trigger: GACAACTGCTTGGCTATTTCAGGCTTTGATGGGACA...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACCTCTCCTCTTTGTCCTaGACATCGATGGTACTGACT | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANLSSLS*TSMVLT Trigger: AGTCAGTACCATCGATGTGCAGGACAAAGAGGAGAG...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | GCTCCCCACAGCACTAGGTGGTACCTACTACACCTTCATTTTACAGGTAAGAAAGTGGAGGATTCCTGGTaGCTTAGAGCAGAAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: APHSTRWYLLHLHFTGKKVEDSW*LRAEDR Trigger: TCTGTCTTCTGCTCTAAGGCACCAGGAATCCTCCAC...TTTCTTACCTGTAAAATGAAGGTGTAGTAGGTACCACCTAGTGCTGTGGGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACACACAAAATAGGAAGAAGTACAAAGTTCTGGGTTTaGGAGGGTGCCAGGTATGGG | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHKIGRSTKFWV*EGARYG Trigger: CCCATACCTGGCACCCTCGCAAACCCAGAACTTTGT...ACTTCTTCCTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR GCA 90 bp | GATTCTCACCATGATGCTGTGAAGACAGGAACACAGCCTGCTGCTATACACCTGATCGATGGTACTGACTaGTTCAATGACATCGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: DSHHDAVKTGTQPAAIHLIDGTD*FNDIVV Trigger: GACAACGATGTCATTGAAGCAGTCAGTACCATCGAT...CAGGTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACAAAATAGGAAGAAGTACTCAAGGACTCGAGTaGCTCCTGAGAGGTCAAATG | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHKIGRSTQGLE*LLRGQM Trigger: CATTTGACCTCTCAGGAGCCACTCGAGTCCTTGAGT...ACTTCTTCCTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | GCTCCCCACAGCACTAGGTGGTACCTACTACACCTTCATTTTACAGGTAAGAAATCTGGGTGTAAACCCTaGTTTTCCTGTACAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: APHSTRWYLLHLHFTGKKSGCKP*FSCTES Trigger: GCTCTCTGTACAGGAAAACCAGGGTTTACACCCAGA...TTTCTTACCTGTAAAATGAAGGTGTAGTAGGTACCACCTAGTGCTGTGGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACTCTGAAAATCCTCCATaGCGTACTTTGAAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANSENPP*RTLKSL Trigger: GAGGGACTTCAAAGTACGCCATGGAGGATTTTCAGA...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | CCTGATTCTCACCATGATGCTGTGAAGACAGGAACACAGCCTGCTGCTATACACTACCTGAGCTATATGTaGTCTTCTGGGATTCTACAT | + |
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Preference number: 4 (lower is better) Translates to: PDSHHDAVKTGTQPAAIHYLSYM*SSGILH Trigger: ATGTAGAATCCCAGAAGATCACATATAGCTCAGGTA...GTGTATAGCAGCAGGCTGTGTTCCTGTCTTCACAGCATCATGGTGAGAATCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACAATGCATGGAAGTCTTaGTACAATCGCAAAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANNAWKS*YNRKDS Trigger: GGAGTCTTTGCGATTGTACCAAGACTTCCATGCATT...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACAAAATAGGAAGAAGTGAGAGGTCAAATGCATaGAAGTCTTGGTACAATCGC | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHKIGRSERSNA*KSWYNR Trigger: GCGATTGTACCAAGACTTCCATGCATTTGACCTCTC...ACTTCTTCCTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR TCA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACTTTCTTTCCATCCCATaGTGTGACATCATAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: FTGKKKGQEGQASLPEANFLSIP*CDIIDL Trigger: CAAATCTATGATGTCACATCATGGGATGGAAAGAAA...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 90 bp | CACAGTCCTCAGGCCGCTGAGCCGCGCCCCGTGGAGGATTCCTGGTaGCTTAGAGCAGAAGACAGACACCCGAGGCCAGAGACTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HSPQAAEPRPVEDSW*LRAEDRHPRPETLL Trigger: GAGGAGAGTCTCTGGCCTCGGGTGTCTGTCTTCTGCTCTAAGGCACCAGGAATCCTCCACGGGGCGCGGCTCAGCGGCCTGAGGACTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 90 bp | AGCCAAGGCTGGCAATGCAGGGCCCAGGGCCTTGGCCCTTGTTCCTaGCTTCTGCACACCATCTCTCTCCACTACAGCCAGAGCCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SQGWQCRAQGLGPCS*LLHTISLHYSQSRG Trigger: GCCCCGGCTCTGGCTGTAGTGGAGAGAGATGGTGTGCAGAAGTCAGGAACAAGGGCCAAGGCCCTGGGCCCTGCATTGCCAGCCTTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 90 bp | ATCCACAGTCCTCAGGCCGCTGAGCCGCGCCCCGTGGAGGATTCCTaGTGCCTTAGAGCAGAAGACAGACACCCGAGGCCAGAGACTCTC | + |
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Preference number: 5 (lower is better) Translates to: IHSPQAAEPRPVEDS*CLRAEDRHPRPETL Trigger: GAGAGTCTCTGGCCTCGGGTGTCTGTCTTCTGCTCTAAGGCACCAGGAATCCTCCACGGGGCGCGGCTCAGCGGCCTGAGGACTGTGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 90 bp | CTACAGCCAGAGCCGGGGCTGACAGTCTCCAACGCTGCCCACTTCTaGCGGGTGTCCACAAGCCCCAGCCGACCTGAGTTGCCACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQPEPGLTVSNAAHF*RVSTSPSRPELPQK Trigger: TTTCTGTGGCAACTCAGGTCGGCTGGGGCTTGTGGACACCCGCCAGAAGTGGGCAGCGTTGGAGACTGTCAGCCCCGGCTCTGGCTGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 90 bp | GCTGGCAATGCAGGGCCCAGGGCCTTGGCCCTTGTTCCTGACTTCTaGACACCATCTCTCTCCACTACAGCCAGAGCCGGGGCTGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGNAGPRALALVPDF*TPSLSTTARAGADS Trigger: ACTGTCAGCCCCGGCTCTGGCTGTAGTGGAGAGAGATGGTGTGCAGAAGTCAGGAACAAGGGCCAAGGCCCTGGGCCCTGCATTGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 90 bp | CGGGTGTCCACAAGCCCCAGCCGACCTGAGCTATATGTGATCTTCTaGGATTCTACATCCACAGTCCTCAGGCCGCTGAGCCGCGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RVSTSPSRPELYVIF*DSTSTVLRPLSRAP Trigger: CGGGGCGCGGCTCAGCGGCCTGAGGACTGTGGATGTAGAATCCCAGAAGATCACATATAGCTCAGGTCGGCTGGGGCTTGTGGACACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146402.2 |
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| CDS CCA 90 bp | CTACAGCCAGAGCCGGGGCTGACAGTCTCCAACGCTGCCCACTTCTaGCGGGTGTCCACAAGCCCCAGCCGACCTGAGCTATATGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LQPEPGLTVSNAAHF*RVSTSPSRPELYVI Trigger: GATCACATATAGCTCAGGTCGGCTGGGGCTTGTGGACACCCGCCAGAAGTGGGCAGCGTTGGAGACTGTCAGCCCCGGCTCTGGCTGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146402.2 |
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| CDS TCA 90 bp | AGGATGACAGAGATTCCGGGAGTCAAGGAGACAGAGCTGCCCATCTaGGCCAAGGCTGGCAATGCAGGGCCCAGGGCCTTGGCCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RMTEIPGVKETELPI*AKAGNAGPRALALV Trigger: AACAAGGGCCAAGGCCCTGGGCCCTGCATTGCCAGCCTTGGCTCAGATGGGCAGCTCTGTCTCCTTGACTCCCGGAATCTCTGTCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 90 bp | AGCTGCCCATCTGAGCCAAGGCTGGCAATGCAGGGCCCAGGGCCTTaGCCCTTGTTCCTGACTTCTGCACACCATCTCTCTCCACTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SCPSEPRLAMQGPGP*PLFLTSAHHLSPLQ Trigger: CTGTAGTGGAGAGAGATGGTGTGCAGAAGTCAGGAACAAGGGCCAAGGCCCTGGGCCCTGCATTGCCAGCCTTGGCTCAGATGGGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 90 bp | CAGCAGCTCTGGGTCAGGGCTGGGTTTGAACACCGGACACTGGGCTaGGCTCACAGGATGACAGAGATTCCGGGAGTCAAGGAGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QQLWVRAGFEHRTLG*AHRMTEIPGVKETE Trigger: CTCTGTCTCCTTGACTCCCGGAATCTCTGTCATCCTGTGAGCTCAGCCCAGTGTCCGGTGTTCAAACCCAGCCCTGACCCAGAGCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 90 bp | CTGCCCACTTCTGGCGGGTGTCCACAAGCCCCAGCCGACCTGAGTTaGCACAGAAAGCAAAGGTATTTGCGTCTAGGACCTGAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPTSGGCPQAPADLS*HRKQRYLRLGPEGS Trigger: GCTGCCTTCAGGTCCTAGACGCAAATACCTTTGCTTTCTGTGGCAACTCAGGTCGGCTGGGGCTTGTGGACACCCGCCAGAAGTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 90 bp | CAACGCTGCCCACTTCTGGCGGGTGTCCACAAGCCCCAGCCGACCTaGGCTATATGTGATCTTCTGGGATTCTACATCCACAGTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRCPLLAGVHKPQPT*AICDLLGFYIHSPQ Trigger: CTGAGGACTGTGGATGTAGAATCCCAGAAGATCACATATAGCTCAGGTCGGCTGGGGCTTGTGGACACCCGCCAGAAGTGGGCAGCGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146402.2 |
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| CDS-3UTR CAA 90 bp | CACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCATGAGGGCCCCAGCCGACCTGAGTaGCCACAGAAAGCAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSPCQPLKQLLFSEAHEGPSRPE*PQKAKV Trigger: TACCTTTGCTTTCTGTGGCAACTCAGGTCGGCTGGG...GCCCTCATGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CAA 90 bp | GTTCACTCACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCACCAGGGCCTTGGCCCTaGTTCCTGACTTCTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VHSQSMSASQTTPLLRGPPGPWP*FLTSAH Trigger: GTGTGCAGAAGTCAGGAACAAGGGCCAAGGCCCTGG...TGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTGAGTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CCA 90 bp | TCAAGGACTCGAGTGGCTCCTGAGAGGTCAAATGCATGGAAGTCTTaGTACAATCGCAAAGACTCCACGAGCCAGTCCTCAGCGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRTRVAPERSNAWKS*YNRKDSTSQSSASS Trigger: GGAGCTCGCTGAGGACTGGCTCGTGGAGTCTTTGCGATTGTACCAAGACTTCCATGCATTTGACCTCTCAGGAGCCACTCGAGTCCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CAA 90 bp | GCTCCCCACAGCACTAGGTGGTACCTACTACACCTTCATTTTACAGGTAAGAAAGCAGGGCCCAGGGCCTaGGCCCTTGTTCCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: APHSTRWYLLHLHFTGKKAGPRA*ALVPDF Trigger: GAAGTCAGGAACAAGGGCCAAGGCCCTGGGCCCTGC...TTTCTTACCTGTAAAATGAAGGTGTAGTAGGTACCACCTAGTGCTGTGGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CCA 90 bp | CTTGCTGCTGATAACAAAGTTCTGGGTTTGCGAGGGTGCCAGGTATaGGTGGTGACCAGAGGAGCAGAGTCTACGTCATTTCCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAADNKVLGLRGCQV*VVTRGAESTSFPSR Trigger: CCTGGATGGAAATGACGTAGACTCTGCTCCTCTGGTCACCACCCATACCTGGCACCCTCGCAAACCCAGAACTTTGTTATCAGCAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CAA 90 bp | GTGTGCACACCCAAGCACGTGCACCCTCGTGCAAGTAATGAACACGAACACACAAACAAAGTTCTGGGTTaGCGAGGGTGCCAGGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: VCTPKHVHPRASNEHEHTNKVLG*RGCQVW Trigger: CCATACCTGGCACCCTCGCAAACCCAGAACTTTGTT...TGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 90 bp | GAGCAGAAGACAGACACCCGAGGCCAGAGACTCTCCTCTTTGTCCTaGACATCGATGGTACTGACTGCTTCAATGACATCGTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EQKTDTRGQRLSSLS*TSMVLTASMTSLSS Trigger: AGAGGACAACGATGTCATTGAAGCAGTCAGTACCATCGATGTGCAGGACAAAGAGGAGAGTCTCTGGCCTCGGGTGTCTGTCTTCTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS-3UTR CAA 90 bp | TTTACAGGTAAGAAAAAGGGACAAGAAGGGCAGGCTAGCTTGCCTGAAGCCAACCCTCCATGGCGTACTTaGAAGTCCCTCTCTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FTGKKKGQEGQASLPEANPPWRT*KSLSGC Trigger: ACACCCAGAGAGGGACTTCAAAGTACGCCATGGAGG...GTTGGCTTCAGGCAAGCTAGCCTGCCCTTCTTGTCCCTTTTTCTTACCTGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 90 bp | CGACCTGAGTTGCCACAGAAAGCAAAGGTATTTGCGTCTAGGACCTaGAGGCAGCTCAAGGACTCACTGTCAGCTGTACCTGAGCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: RPELPQKAKVFASRT*RQLKDSLSAVPELY Trigger: ATATAGCTCAGGTACAGCTGACAGTGAGTCCTTGAGCTGCCTTCAGGTCCTAGACGCAAATACCTTTGCTTTCTGTGGCAACTCAGGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 90 bp | GAAGAATCACTTGCTGCTGATAACAAAGTTCTGGGTTTGCGAGGGTaGCAGGTATGGGTGGTGACCAGAGGAGCAGAGTCTACGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: EESLAADNKVLGLRG*QVWVVTRGAESTSF Trigger: AAATGACGTAGACTCTGCTCCTCTGGTCACCACCCATACCTGGCACCCTCGCAAACCCAGAACTTTGTTATCAGCAGCAAGTGATTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CCA 90 bp | GACATCGTTGTCCTCTCTGACTTGCCACATTTGTATGTAACACCCTaGAAGTCCACTGGTCACCAGCAACCTGGTATCTGGCACATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DIVVLSDLPHLYVTP*KSTGHQQPGIWHML Trigger: AAGCATGTGCCAGATACCAGGTTGCTGGTGACCAGTGGACTTCCAGGGTGTTACATACAAATGTGGCAAGTCAGAGAGGACAACGATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS-3UTR CAA 90 bp | GTTCACTCACAGTCCATGTCAGCCTCTCAAACAACTCCTCTTCTCAGAGGCCCATCTGACTTGCCACATTaGTATGTAACACCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VHSQSMSASQTTPLLRGPSDLPH*YVTPWK Trigger: CTTCCAGGGTGTTACATACAAATGTGGCAAGTCAGA...TGGGCCTCTGAGAAGAGGAGTTGTTTGAGAGGCTGACATGGACTGTGAGTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CAA 90 bp | GTGTGCACACCCAAGCACGTGCACCCTCGTGCAAGTAATGAACACGAACACACAGCAGAGAAGAATCACTaGCTGCTGATAACAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCTPKHVHPRASNEHEHTAEKNH*LLITKF Trigger: GAACTTTGTTATCAGCAGCAAGTGATTCTTCTCTGC...TGTGTGTTCGTGTTCATTACTTGCACGAGGGTGCACGTGCTTGGGTGTGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 90 bp | AGGCCAGAGACTCTCCTCTTTGTCCTGCACATCGATGGTACTGACTaGTTCAATGACATCGTTGTCCTCTCTGACTTGCCACATTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RPETLLFVLHIDGTD*FNDIVVLSDLPHLY Trigger: ATACAAATGTGGCAAGTCAGAGAGGACAACGATGTCATTGAAGCAGTCAGTACCATCGATGTGCAGGACAAAGAGGAGAGTCTCTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 90 bp | GGCACATGCTTTAGGTCAAAGACAGATCTGTCTGAAAATCCTCCATaGCGTACTTTGAAGTCCCTCTCTGGGTGTAAACCCTGGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTCFRSKTDLSENPP*RTLKSLSGCKPWFS Trigger: GGAAAACCAGGGTTTACACCCAGAGAGGGACTTCAAAGTACGCCATGGAGGATTTTCAGACAGATCTGTCTTTGACCTAAAGCATGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 90 bp | AAAGACTCCTTTTTCACCAATCCACTCAAGGACTCGAGTGGCTCCTaGGAGGTCAAATGCATGGAAGTCTTGGTACAATCGCAAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: KDSFFTNPLKDSSGS*EVKCMEVLVQSQRL Trigger: GAGTCTTTGCGATTGTACCAAGACTTCCATGCATTTGACCTCTCAGGAGCCACTCGAGTCCTTGAGTGGATTGGTGAAAAAGGAGTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACAAAATAGGAAGAAGTCAGAGACTCTCCTCTTaGTCCTGCACATCGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHKIGRSQRLSS*SCTSMV Trigger: TACCATCGATGTGCAGGACAAAGAGGAGAGTCTCTG...ACTTCTTCCTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 90 bp | TTAGGTCAAAGACAGATCTGTCTGAAAATCCTCCATGGCGTACTTTaGAGTCCCTCTCTGGGTGTAAACCCTGGTTTTCCTGTACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGQRQICLKILHGVL*SPSLGVNPGFPVQR Trigger: TCTCTGTACAGGAAAACCAGGGTTTACACCCAGAGAGGGACTTCAAAGTACGCCATGGAGGATTTTCAGACAGATCTGTCTTTGACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACAAAATAGGAAGAAGTAGAAAGCAAAGGTATTaGCGTCTAGGACCTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHKIGRSRKQRY*RLGPEG Trigger: GCCTTCAGGTCCTAGACGCAAATACCTTTGCTTTCT...ACTTCTTCCTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CAA 90 bp | GCTCCCCACAGCACTAGGTGGTACCTACTACACCTTCATTTTACAGGTAAGAAAAAATGCATGGAAGTCTaGGTACAATCGCAAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: APHSTRWYLLHLHFTGKKKCMEV*VQSQRL Trigger: GAGTCTTTGCGATTGTACCAAGACTTCCATGCATTT...TTTCTTACCTGTAAAATGAAGGTGTAGTAGGTACCACCTAGTGCTGTGGGGAGC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACAAAATAGGAAGAAGTGTTGTCCTCTCTGACTaGCCACATTTGTATGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHKIGRSVVLSD*PHLYVT Trigger: TGTTACATACAAATGTGGCAAGTCAGAGAGGACAAC...ACTTCTTCCTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 72 bp | CAGGCCGCTGAGCCGCGCCCCGTGGAGGATTCCTGGTaGCTTAGAGCAGAAGACAGACACCCGAGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QAAEPRPVEDSW*LRAEDRHPRPE Trigger: CTCTGGCCTCGGGTGTCTGTCTTCTGCTCTAAGGCACCAGGAATCCTCCACGGGGCGCGGCTCAGCGGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS GCA 72 bp | ACTACAGCCAGAGCCGGGGCTGACAGTCTCCAACGCTaGCCACTTCTGGCGGGTGTCCACAAGCCCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TTARAGADSLQR*PLLAGVHKPQP Trigger: CGGCTGGGGCTTGTGGACACCCGCCAGAAGTGGGCAGCGTTGGAGACTGTCAGCCCCGGCTCTGGCTGTAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 72 bp | CCTCAGGCCGCTGAGCCGCGCCCCGTGGAGGATTCCTaGTGCCTTAGAGCAGAAGACAGACACCCGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PQAAEPRPVEDS*CLRAEDRHPRP Trigger: TGGCCTCGGGTGTCTGTCTTCTGCTCTAAGGCACCAGGAATCCTCCACGGGGCGCGGCTCAGCGGCCTGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 72 bp | GAGCCGGGGCTGACAGTCTCCAACGCTGCCCACTTCTaGCGGGTGTCCACAAGCCCCAGCCGACCTGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: EPGLTVSNAAHF*RVSTSPSRPEL Trigger: CAACTCAGGTCGGCTGGGGCTTGTGGACACCCGCCAGAAGTGGGCAGCGTTGGAGACTGTCAGCCCCGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CCA 72 bp | GAGCCGGGGCTGACAGTCTCCAACGCTGCCCACTTCTaGCGGGTGTCCACAAGCCCCAGCCGACCTGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: EPGLTVSNAAHF*RVSTSPSRPEL Trigger: TAGCTCAGGTCGGCTGGGGCTTGTGGACACCCGCCAGAAGTGGGCAGCGTTGGAGACTGTCAGCCCCGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146402.2 |
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| CDS TCA 72 bp | CACACCATCTCTCTCCACTACAGCCAGAGCCGGGGCTaGCAGTCTCCAACGCTGCCCACTTCTGGCGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HTISLHYSQSRG*QSPTLPTSGGC Trigger: ACACCCGCCAGAAGTGGGCAGCGTTGGAGACTGTCAGCCCCGGCTCTGGCTGTAGTGGAGAGAGATGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 72 bp | GAGATTCCGGGAGTCAAGGAGACAGAGCTGCCCATCTaGGCCAAGGCTGGCAATGCAGGGCCCAGGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EIPGVKETELPI*AKAGNAGPRAL Trigger: CAAGGCCCTGGGCCCTGCATTGCCAGCCTTGGCTCAGATGGGCAGCTCTGTCTCCTTGACTCCCGGAATCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 72 bp | AAGTCACCCGCAGCAGCTCTGGGTCAGGGCTGGGTTTaGACACCGGACACTGGGCTGAGCTCACAGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: KSPAAALGQGWV*TPDTGLSSQDD Trigger: GTCATCCTGTGAGCTCAGCCCAGTGTCCGGTGTTCAAACCCAGCCCTGACCCAGAGCTGCTGCGGGTGACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CAA 90 bp | CCATCTGAGCCAAGGCTGGCAATGCAGGGCCCAGGGCCTTGGCCCTaGTTCCTGACTTCTGCACACCATCTCTCTCCACTACAGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSEPRLAMQGPGPWP*FLTSAHHLSPLQPE Trigger: CTCTGGCTGTAGTGGAGAGAGATGGTGTGCAGAAGTCAGGAACAAGGGCCAAGGCCCTGGGCCCTGCATTGCCAGCCTTGGCTCAGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 72 bp | TCTGAGCCAAGGCTGGCAATGCAGGGCCCAGGGCCTTaGCCCTTGTTCCTGACTTCTGCACACCATCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SEPRLAMQGPGP*PLFLTSAHHLS Trigger: AGAGAGATGGTGTGCAGAAGTCAGGAACAAGGGCCAAGGCCCTGGGCCCTGCATTGCCAGCCTTGGCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CAA 72 bp | TGTACTGTCCCATCAAAGCCTGAAATAGCCAAGCAGTaGTCCAGGCCCGGAGCCCAAGTCACCCGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTVPSKPEIAKQ*SRPGAQVTRSS Trigger: GCTGCTGCGGGTGACTTGGGCTCCGGGCCTGGACAACTGCTTGGCTATTTCAGGCTTTGATGGGACAGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CAA 72 bp | TTCTGGCGGGTGTCCACAAGCCCCAGCCGACCTGAGTaGCCACAGAAAGCAAAGGTATTTGCGTCTAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: FWRVSTSPSRPE*PQKAKVFASRT Trigger: GGTCCTAGACGCAAATACCTTTGCTTTCTGTGGCAACTCAGGTCGGCTGGGGCTTGTGGACACCCGCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CAA 90 bp | CCACAAGCCCCAGCCGACCTGAGTTGCCACAGAAAGCAAAGGTATTaGCGTCTAGGACCTGAAGGCAGCTCAAGGACTCACTGTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQAPADLSCHRKQRY*RLGPEGSSRTHCQL Trigger: CAGCTGACAGTGAGTCCTTGAGCTGCCTTCAGGTCCTAGACGCAAATACCTTTGCTTTCTGTGGCAACTCAGGTCGGCTGGGGCTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 72 bp | GGGTGTCCACAAGCCCCAGCCGACCTGAGCTATATGTaGTCTTCTGGGATTCTACATCCACAGTCCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCPQAPADLSYM*SSGILHPQSSG Trigger: GCCTGAGGACTGTGGATGTAGAATCCCAGAAGATCACATATAGCTCAGGTCGGCTGGGGCTTGTGGACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146402.2 |
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| CDS TCA 72 bp | AAGTTCTGGGTTTGCGAGGGTGCCAGGTATGGGTGGTaGCCAGAGGAGCAGAGTCTACGTCATTTCCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: KFWVCEGARYGW*PEEQSLRHFHP Trigger: TGGATGGAAATGACGTAGACTCTGCTCCTCTGGTCACCACCCATACCTGGCACCCTCGCAAACCCAGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
||
| CDS GCA 72 bp | CTTGCTGCTGATAACAAAGTTCTGGGTTTGCGAGGGTaGCAGGTATGGGTGGTGACCAGAGGAGCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAADNKVLGLRG*QVWVVTRGAES Trigger: AGACTCTGCTCCTCTGGTCACCACCCATACCTGGCACCCTCGCAAACCCAGAACTTTGTTATCAGCAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CAA 72 bp | CCAGCCGACCTGAGTTGCCACAGAAAGCAAAGGTATTaGCGTCTAGGACCTGAAGGCAGCTCAAGGACTCAC | + |
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Preference number: 6 (lower is better) Translates to: PADLSCHRKQRY*RLGPEGSSRTH Trigger: GTGAGTCCTTGAGCTGCCTTCAGGTCCTAGACGCAAATACCTTTGCTTTCTGTGGCAACTCAGGTCGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CAA 90 bp | AGGCCTGGAGGTCCACCCAGTCCCACACATGCAGAGAAGAATCACTaGCTGCTGATAACAAAGTTCTGGGTTTGCGAGGGTGCCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: RPGGPPSPTHAEKNH*LLITKFWVCEGARY Trigger: ATACCTGGCACCCTCGCAAACCCAGAACTTTGTTATCAGCAGCAAGTGATTCTTCTCTGCATGTGTGGGACTGGGTGGACCTCCAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 72 bp | ACAGACACCCGAGGCCAGAGACTCTCCTCTTTGTCCTaGACATCGATGGTACTGACTGCTTCAATGACATCG | + |
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Preference number: 6 (lower is better) Translates to: TDTRGQRLSSLS*TSMVLTASMTS Trigger: CGATGTCATTGAAGCAGTCAGTACCATCGATGTGCAGGACAAAGAGGAGAGTCTCTGGCCTCGGGTGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 72 bp | CGAGTGGCTCCTGAGAGGTCAAATGCATGGAAGTCTTaGTACAATCGCAAAGACTCCACGAGCCAGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RVAPERSNAWKS*YNRKDSTSQSS Trigger: TGAGGACTGGCTCGTGGAGTCTTTGCGATTGTACCAAGACTTCCATGCATTTGACCTCTCAGGAGCCACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CAA 72 bp | CAGAAGACAGACACCCGAGGCCAGAGACTCTCCTCTTaGTCCTGCACATCGATGGTACTGACTGCTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: QKTDTRGQRLSS*SCTSMVLTASM Trigger: CATTGAAGCAGTCAGTACCATCGATGTGCAGGACAAAGAGGAGAGTCTCTGGCCTCGGGTGTCTGTCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CAA 90 bp | GCCTTAGAGCAGAAGACAGACACCCGAGGCCAGAGACTCTCCTCTTaGTCCTGCACATCGATGGTACTGACTGCTTCAATGACATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: ALEQKTDTRGQRLSS*SCTSMVLTASMTSL Trigger: CAACGATGTCATTGAAGCAGTCAGTACCATCGATGTGCAGGACAAAGAGGAGAGTCTCTGGCCTCGGGTGTCTGTCTTCTGCTCTAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CAA 90 bp | ACATGCAGAGAAGAATCACTTGCTGCTGATAACAAAGTTCTGGGTTaGCGAGGGTGCCAGGTATGGGTGGTGACCAGAGGAGCAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: TCREESLAADNKVLG*RGCQVWVVTRGAES Trigger: AGACTCTGCTCCTCTGGTCACCACCCATACCTGGCACCCTCGCAAACCCAGAACTTTGTTATCAGCAGCAAGTGATTCTTCTCTGCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 72 bp | TTGCCACAGAAAGCAAAGGTATTTGCGTCTAGGACCTaGAGGCAGCTCAAGGACTCACTGTCAGCTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: LPQKAKVFASRT*RQLKDSLSAVP Trigger: AGGTACAGCTGACAGTGAGTCCTTGAGCTGCCTTCAGGTCCTAGACGCAAATACCTTTGCTTTCTGTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 72 bp | TCAAGGACTCACTGTCAGCTGTACCTGAGCTATATGTaGTCTTCTGGGATTCTACATCCACAGTCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SRTHCQLYLSYM*SSGILHPQSSG Trigger: GCCTGAGGACTGTGGATGTAGAATCCCAGAAGATCACATATAGCTCAGGTACAGCTGACAGTGAGTCCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 72 bp | CTGAAGGCAGCTCAAGGACTCACTGTCAGCTGTACCTaGGCTATATGTGATCTTCTGGGATTCTACATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LKAAQGLTVSCT*AICDLLGFYIH Trigger: GTGGATGTAGAATCCCAGAAGATCACATATAGCTCAGGTACAGCTGACAGTGAGTCCTTGAGCTGCCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS TCA 72 bp | TCTACGTCATTTCCATCCAGGAAGATGTGGCCTTTGTaGGTGAAGAGAGGCTCCGCTTGGGTTTTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: STSFPSRKMWPL*VKRGSAWVFFP Trigger: TGGAAAGAAAACCCAAGCGGAGCCTCTCTTCACTCACAAAGGCCACATCTTCCTGGATGGAAATGACGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS GCA 72 bp | ACTCTCCTCTTTGTCCTGCACATCGATGGTACTGACTaGTTCAATGACATCGTTGTCCTCTCTGACTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLLFVLHIDGTD*FNDIVVLSDLP Trigger: TGGCAAGTCAGAGAGGACAACGATGTCATTGAAGCAGTCAGTACCATCGATGTGCAGGACAAAGAGGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CCA 72 bp | CTTGCCACATTTGTATGTAACACCCTGGAAGTCCACTaGTCACCAGCAACCTGGTATCTGGCACATGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LATFVCNTLEVH*SPATWYLAHAL Trigger: TAAAGCATGTGCCAGATACCAGGTTGCTGGTGACCAGTGGACTTCCAGGGTGTTACATACAAATGTGGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 72 bp | TTTTTCACCAATCCACTCAAGGACTCGAGTGGCTCCTaGGAGGTCAAATGCATGGAAGTCTTGGTACAATCG | + |
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Preference number: 6 (lower is better) Translates to: FFTNPLKDSSGS*EVKCMEVLVQS Trigger: CGATTGTACCAAGACTTCCATGCATTTGACCTCTCAGGAGCCACTCGAGTCCTTGAGTGGATTGGTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 72 bp | AGACAGATCTGTCTGAAAATCCTCCATGGCGTACTTTaGAGTCCCTCTCTGGGTGTAAACCCTGGTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RQICLKILHGVL*SPSLGVNPGFP Trigger: AGGAAAACCAGGGTTTACACCCAGAGAGGGACTTCAAAGTACGCCATGGAGGATTTTCAGACAGATCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 72 bp | GAGGCTCCGCTTGGGTTTTCTTTCCATCCCATGATGTaGCATCATAGATTTGTACTGTCCCATCAAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: EAPLGFSFHPMM*HHRFVLSHQSL Trigger: CAGGCTTTGATGGGACAGTACAAATCTATGATGTCACATCATGGGATGGAAAGAAAACCCAAGCGGAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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| CDS CAA 72 bp | AAGACAGATCTGTCTGAAAATCCTCCATGGCGTACTTaGAAGTCCCTCTCTGGGTGTAAACCCTGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: KTDLSENPPWRT*KSLSGCKPWFS Trigger: GGAAAACCAGGGTTTACACCCAGAGAGGGACTTCAAAGTACGCCATGGAGGATTTTCAGACAGATCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS CAA 90 bp | TTTAGGTCAAAGACAGATCTGTCTGAAAATCCTCCATGGCGTACTTaGAAGTCCCTCTCTGGGTGTAAACCCTGGTTTTCCTGTACAGAG | + |
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Preference number: 6 (lower is better) Translates to: FRSKTDLSENPPWRT*KSLSGCKPWFSCTE Trigger: CTCTGTACAGGAAAACCAGGGTTTACACCCAGAGAGGGACTTCAAAGTACGCCATGGAGGATTTTCAGACAGATCTGTCTTTGACCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026816.15 ENSMUST00000146402.2 |
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| CDS TCA 72 bp | GAAGAGAGGCTCCGCTTGGGTTTTCTTTCCATCCCATaGTGTGACATCATAGATTTGTACTGTCCCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: EERLRLGFLSIP*CDIIDLYCPIK Trigger: TTTGATGGGACAGTACAAATCTATGATGTCACATCATGGGATGGAAAGAAAACCCAAGCGGAGCCTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026816.15 |
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