Pregenerated sensors for WDR70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039828Ensembl transcript IDs: ENSMUST00000045766.8, ENSMUST00000227371.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGAAGAGGGTGTCCTATCCCCAGACTCTGAAGGTCAAGGGGTTGTaGGATCTGGTGGATGCTGGGAACTCCACCCAGGTGCTCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RKRVSYPQTLKVKGL*DLVDAGNSTQVLWK Trigger: CTTCCAGAGCACCTGGGTGGAGTTCCCAGCATCCACCAGATCTCACAACCCCTTGACCTTCAGAGTCTGGGGATAGGACACCCTCTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR TCA 90 bp | GCAGTGTCCAAGGAGGCCGGAAGAGGGTGTCCTATCCCCAGACTCTaGAGGTCAAGGGGTTGTGAGATCTGGTGGATGCTGGGAACTCCA | + |
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Preference number: 1 (lower is better) Translates to: AVSKEAGRGCPIPRL*RSRGCEIWWMLGTP Trigger: TGGAGTTCCCAGCATCCACCAGATCTCACAACCCCTTGACCTTCAGAGTCTGGGGATAGGACACCCTCTTCCGGCCTCCTTGGACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR GCA 90 bp | CTATCCCCAGACTCTGAAGGTCAAGGGGTTGTGAGATCTGGTGGATaGTGGGAACTCCACCCAGGTGCTCTGGAAGAATATCTAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LSPDSEGQGVVRSGG*WELHPGALEEYLVL Trigger: GAGGACTAGATATTCTTCCAGAGCACCTGGGTGGAGTTCCCAGCATCCACCAGATCTCACAACCCCTTGACCTTCAGAGTCTGGGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR GCA 90 bp | TGTATGAATGCTTTTGCCTGCATGGATGTCTGGGCACCATATGTGTaGAGTGTCCAAGGAGGCCGGAAGAGGGTGTCCTATCCCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: CMNAFACMDVWAPYV*SVQGGRKRVSYPQT Trigger: AGTCTGGGGATAGGACACCCTCTTCCGGCCTCCTTGGACACTGCACACATATGGTGCCCAGACATCCATGCAGGCAAAAGCATTCATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR CCA 90 bp | TCCCCAGACTCTGAAGGTCAAGGGGTTGTGAGATCTGGTGGATGCTaGGAACTCCACCCAGGTGCTCTGGAAGAATATCTAGTCCTCGTA | + |
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Preference number: 1 (lower is better) Translates to: SPDSEGQGVVRSGGC*ELHPGALEEYLVLV Trigger: TACGAGGACTAGATATTCTTCCAGAGCACCTGGGTGGAGTTCCCAGCATCCACCAGATCTCACAACCCCTTGACCTTCAGAGTCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR CCA 90 bp | TTTATTACTGTTACATGTATGAATGCTTTTGCCTGCATGGATGTCTaGGCACCATATGTGTGCAGTGTCCAAGGAGGCCGGAAGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: FITVTCMNAFACMDV*APYVCSVQGGRKRV Trigger: CACCCTCTTCCGGCCTCCTTGGACACTGCACACATATGGTGCCCAGACATCCATGCAGGCAAAAGCATTCATACATGTAACAGTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCACCATATGTGTGCAGTGTCCAAGGAGGCCGGAAGAGGGTGTCCTATCCGGAACTCCACCCAGGTaGTCTGGAAGAATATCTAGT | + |
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Preference number: 2 (lower is better) Translates to: LGTICVQCPRRPEEGVLSGTPPR*SGRISS Trigger: ACTAGATATTCTTCCAGAGCACCTGGGTGGAGTTCC...GGATAGGACACCCTCTTCCGGCCTCCTTGGACACTGCACACATATGGTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCACCATATGTGTGCAGTGTCCAAGGAGGCCGGAAGAGGGTGTCCTATCCAAGTCAAAGCCATCCTaGTCTACACAGAAAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LGTICVQCPRRPEEGVLSKSKPS*STQKVS Trigger: GCTGACTTTCTGTGTAGACCAGGATGGCTTTGACTT...GGATAGGACACCCTCTTCCGGCCTCCTTGGACACTGCACACATATGGTGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR-3UTR GCA 90 bp | TATCTAGTCCTCGTAATCGCTGAGCCACCTTCCAGCCCCACAATTCAGCATTTTCTGAAGGAGATACCCTaGCAGAAGTCAAAGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: YLVLVIAEPPSSPTIQHFLKEIP*QKSKPS Trigger: GGATGGCTTTGACTTCTGGCAGGGTATCTCCTTCAG...AAAATGCTGAATTGTGGGGCTGGAAGGTGGCTCAGCGATTACGAGGACTAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR-3UTR CCA 90 bp | TATCTAGTCCTCGTAATCGCTGAGCCACCTTCCAGCCCCACAATTCAGCATTTTGAACTGCCAACCATCTaGAAAAGCCATCTGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: YLVLVIAEPPSSPTIQHFELPTI*KSHLEV Trigger: TACTTCCAGATGGCTTTTCCAGATGGTTGGCAGTTC...AAAATGCTGAATTGTGGGGCTGGAAGGTGGCTCAGCGATTACGAGGACTAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAGAAAGTCAGCCAGGATTACAGTGTGACCCTGTCTCAACTGCAAACAAAAGTACTATCACAGCACTaGTTTAAATCCAGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: TQKVSQDYSVTLSQLQTKVLSQH*FKSSCS Trigger: GGAACAGCTGGATTTAAATCAGTGCTGTGATAGTAC...TTTTGTTTGCAGTTGAGACAGGGTCACACTGTAATCCTGGCTGACTTTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATCCCATATCTCTTCTTTGTCACTAAAATTGAATTTGGGTCAGATCTAGGTGCCAGGATTACAGTGTaGCCCTGTCTCAACTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: KIPYLFFVTKIEFGSDLGARITV*PCLNCK Trigger: TTTGCAGTTGAGACAGGGTCACACTGTAATCCTGGC...ACCTAGATCTGACCCAAATTCAATTTTAGTGACAAAGAAGAGATATGGGATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR GCA 72 bp | GCTTTTGCCTGCATGGATGTCTGGGCACCATATGTGTaGAGTGTCCAAGGAGGCCGGAAGAGGGTGTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: AFACMDVWAPYV*SVQGGRKRVSY Trigger: ATAGGACACCCTCTTCCGGCCTCCTTGGACACTGCACACATATGGTGCCCAGACATCCATGCAGGCAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR GCA 72 bp | GACTCTGAAGGTCAAGGGGTTGTGAGATCTGGTGGATaGTGGGAACTCCACCCAGGTGCTCTGGAAGAATAT | + |
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Preference number: 3 (lower is better) Translates to: DSEGQGVVRSGG*WELHPGALEEY Trigger: ATATTCTTCCAGAGCACCTGGGTGGAGTTCCCAGCATCCACCAGATCTCACAACCCCTTGACCTTCAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR CCA 72 bp | TCTGAAGGTCAAGGGGTTGTGAGATCTGGTGGATGCTaGGAACTCCACCCAGGTGCTCTGGAAGAATATCTA | + |
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Preference number: 3 (lower is better) Translates to: SEGQGVVRSGGC*ELHPGALEEYL Trigger: TAGATATTCTTCCAGAGCACCTGGGTGGAGTTCCCAGCATCCACCAGATCTCACAACCCCTTGACCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR CCA 72 bp | GTTACATGTATGAATGCTTTTGCCTGCATGGATGTCTaGGCACCATATGTGTGCAGTGTCCAAGGAGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: VTCMNAFACMDV*APYVCSVQGGR Trigger: CCGGCCTCCTTGGACACTGCACACATATGGTGCCCAGACATCCATGCAGGCAAAAGCATTCATACATGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR CCA 72 bp | CTGAAGGAGATACCCTGCCAGAAGTCAAAGCCATCCTaGTCTACACAGAAAGTCAGCCAGGATTACAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LKEIPCQKSKPS*STQKVSQDYSV Trigger: CACACTGTAATCCTGGCTGACTTTCTGTGTAGACCAGGATGGCTTTGACTTCTGGCAGGGTATCTCCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| 3UTR GCA 72 bp | TTATTTATTACTGTTACATGTATGAATGCTTTTGCCTaGATGGATGTCTGGGCACCATATGTGTGCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LFITVTCMNAFA*MDVWAPYVCSV Trigger: GACACTGCACACATATGGTGCCCAGACATCCATGCAGGCAAAAGCATTCATACATGTAACAGTAATAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| CDS-3UTR GCA 90 bp | GAAGAATATCTAGTCCTCGTAATCGCTGAGCCACCTTCCAGCCCCACAATTCAGGCTGTCCTTCGAGTTTaGTCGAACATGGCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: EEYLVLVIAEPPSSPTIQAVLRV*SNMASK Trigger: CTTGGAGGCCATGTTCGAGCAAACTCGAAGGACAGC...CTGAATTGTGGGGCTGGAAGGTGGCTCAGCGATTACGAGGACTAGATATTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTCGGCCACCACGACCTaGGCCTGCTACAGGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFSATTT*ACYRRL Trigger: GAGCCTCCTGTAGCAGGCCCAGGTCGTGGTGGCCGA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGACAGGGTGCCCCCGTaGGTTCCAACTCGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFDRVPP*VPTRPP Trigger: TGGTGGCCGAGTTGGAACCCACGGGGGCACCCTGTC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTGTAGGAGGACAGGGTaGCCCCGTGGGTTCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFCRRTG*PRGFQL Trigger: GAGTTGGAACCCACGGGGGCACCCTGTCCTCCTACA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTGGCTTCCCGGGGATTaGTGTCGTCGGTCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFWLPGD*CRRSCP Trigger: TGGACAAGACCGACGACAGCAATCCCCGGGAAGCCA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTTCCTCGTACTTCGCTaGCGGGGCTCACGGAACATG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFFLVLR*RGSRNM Trigger: CATGTTCCGTGAGCCCCGCCAGCGAAGTACGAGGAA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGGAGGCTCTGGTTTGTaGGACTTCAGGGGGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFGGSGL*DFRGSS Trigger: ACTGGACCCCCTGAAGTCCCACAAACCAGAGCCTCC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTGGTTCAGCTTTGGATaGCACAGGCAGCGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFWFSFG*HRQRTT Trigger: TGTGGTCCGCTGCCTGTGGCATCCAAAGCTGAACCA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGCTGTCCTTCGAGTTTaGTCGAACATGGCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFAVLRV*SNMASK Trigger: CTTGGAGGCCATGTTCGAGCAAACTCGAAGGACAGC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCACTCTCACTGTCACTaGTGCTTGTGTCCCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFHSHCH*CLCPCM Trigger: CATGCAGGGACACAAGCAGCAGTGACAGTGAGAGTG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCAGACAAGTTTGCCACTaGCACACCCCCTTTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFRQVCH*HTPFGQ Trigger: CTGTCCAAAGGGGGTGTGGCAGTGGCAAACTTGTCT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTTGCTGTGTGGCCCTTaGTGTTGGCCATGTCTACGA | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFLLCGP*CWPCLR Trigger: TCGTAGACATGGCCAACACCAAGGGCCACACAGCAA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCCACACTCGCATCTGTaGTGTGGATTTCATAGACCC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFPHSHL*CGFHRP Trigger: GGGTCTATGAAATCCACATCACAGATGCGAGTGTGG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTCTCACTGTCACTGCTaGTTGTGTCCCTGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFSHCHC*LCPCMM Trigger: CATCATGCAGGGACACAAGCAGCAGTGACAGTGAGA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCCAAGAAGACAAGTTTaGCACTGCCACACCCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFPRRQV*HCHTPF Trigger: AAAGGGGGTGTGGCAGTGGCAAACTTGTCTTCTTGG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTGGCATTCACAAGGTTaGAGGGATCGAAATGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFWHSQG*RDRNAL Trigger: CAAGGCATTTCGATCCCTTCAACCTTGTGAATGCCA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCTCAGTGTTATCTCATaGGAGTCAGGAATCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFLSVIS*ESGILW Trigger: CCAGAGGATTCCTGACTCGCATGAGATAACACTGAG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCAATAACCTTGGCCTGTaGGCTTCCAGAAACAACAAG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFNNLGL*ASRNNK Trigger: CTTGTTGTTTCTGGAAGCTCACAGGCCAAGGTTATT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTATTTTGGGATGCCATaGGCCAGTATGAAGCATTGC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFYFGMP*ASMKHC Trigger: GCAATGCTTCATACTGGCTCATGGCATCCCAAAATA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGTCGTAGTACACTTTTaGCAGTCCATTTCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFVVVHF*QSISSS Trigger: GGAACTGGAAATGGACTGGCAAAAGTGTACTACGAC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCATATGGGTTATCTTCTaGTGCTTTGGCATGGCGCAA | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFIWVIF*CFGMAQ Trigger: TTGCGCCATGCCAAAGCAGCAGAAGATAACCCATAT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCCACTTGGGCAAACATaGTTTTTGGCTGAGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFPLGQT*FLAEFW Trigger: CCAAAACTCAGCCAAAAACCATGTTTGCCCAAGTGG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTCATCAGACTCCACTTaGGCAAACATGGTTTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFSSDST*ANMVFG Trigger: GCCAAAAACCATGTTTGCCCAAGTGGAGTCTGATGA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCAACATGGTTTTTGGCTaGGTTTTGGAATATGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFNMVFG*VLEYAG Trigger: GCCAGCATATTCCAAAACTCAGCCAAAAACCATGTT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCACTGTTTTAGTGCCATaGCTCAGTGTTATCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFTVLVP*LSVISC Trigger: GCATGAGATAACACTGAGGCATGGCACTAAAACAGT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCACAGTAGCATCATTTaGGCAAGTCATAAATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFHSSII*ASHKFS Trigger: GGAGAATTTATGACTTGCTCAAATGATGCTACTGTG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTGTTTTGCCTTCCTCTaGGTTTTAACCACACATAGT | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFCFAFL*VLTTHS Trigger: ACTATGTGTGGTTAAAACCCAGAGGAAGGCAAAACA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGGCAAACATGGTTTTTaGCTGAGTTTTGGAATATGC | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFGKHGF*LSFGIC Trigger: GCATATTCCAAAACTCAGCCAAAAACCATGTTTGCC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCATTCTCCTTTTATTTTaGGATGCCATGAGCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: KTLYPILLLHANSSSTRFILLLF*DAMSQY Trigger: ATACTGGCTCATGGCATCCCAAAATAAAAGGAGAAT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS GCA 90 bp | CATCGTCAGATGAATCAGAACTGTCGTCACTCTCACTGTCACTGCTaGTTGTGTCCCTGCATGATGACTGTGAGCGCTCTCTGGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: HRQMNQNCRHSHCHC*LCPCMMTVSALWLH Trigger: GTGCAGCCAGAGAGCGCTCACAGTCATCATGCAGGGACACAAGCAGCAGTGACAGTGAGAGTGACGACAGTTCTGATTCATCTGACGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS GCA 90 bp | GCTCATCGTCAGATGAATCAGAACTGTCGTCACTCTCACTGTCACTaGTGCTTGTGTCCCTGCATGATGACTGTGAGCGCTCTCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: AHRQMNQNCRHSHCH*CLCPCMMTVSALWL Trigger: CAGCCAGAGAGCGCTCACAGTCATCATGCAGGGACACAAGCAGCAGTGACAGTGAGAGTGACGACAGTTCTGATTCATCTGACGATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS GCA 90 bp | CCCAGAGCAGAAACTGTTTTAGTGCCATGCCTCAGTGTTATCTCATaGGAGTCAGGAATCCTCTGGACAGGGTTATCCTCTTCTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PRAETVLVPCLSVIS*ESGILWTGLSSSPS Trigger: TGAAGGAGAAGAGGATAACCCTGTCCAGAGGATTCCTGACTCGCATGAGATAACACTGAGGCATGGCACTAAAACAGTTTCTGCTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | ACTGTTACATGTATGAATGCTTTTGCCTGCATGGATGTCTGGGCACCATATGTGCGCTGTCCTTCGAGTTaGCTCGAACATGGCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: TVTCMNAFACMDVWAPYVRCPSS*LEHGLQ Trigger: TTGGAGGCCATGTTCGAGCAAACTCGAAGGACAGCG...CACATATGGTGCCCAGACATCCATGCAGGCAAAAGCATTCATACATGTAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCACAGGAGGCTCTGGTTaGTGGGACTTCAGGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFTGGSG*WDFRGS Trigger: GGACCCCCTGAAGTCCCACAAACCAGAGCCTCCTGT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCATGGCTTCCCGGGGATaGCTGTCGTCGGTCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFMASRG*LSSVLS Trigger: GGACAAGACCGACGACAGCAATCCCCGGGAAGCCAT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CCA 90 bp | TTAGTGCCATGCCTCAGTGTTATCTCATGCGAGTCAGGAATCCTCTaGACAGGGTTATCCTCTTCTCCTTCATCGTCTAACTCGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: LVPCLSVISCESGIL*TGLSSSPSSSNSSS Trigger: TGATGACGAGTTAGACGATGAAGGAGAAGAGGATAACCCTGTCCAGAGGATTCCTGACTCGCATGAGATAACACTGAGGCATGGCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCACTGCCACACCCCCTTaGGACAGAGGTACCGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFTATPP*DRGTGN Trigger: GTTACCGGTACCTCTGTCCAAAGGGGGTGTGGCAGT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CCA 90 bp | AGCATTGCTGTGTGGCCCTTGGTGTTGGCCATGTCTACGATATACTaGTCTCCCTTTATACACTCCATGACTTCAAAACCATCTCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SIAVWPLVLAMSTIY*SPFIHSMTSKPSLS Trigger: TGACAGAGATGGTTTTGAAGTCATGGAGTGTATAAAGGGAGACCAGTATATCGTAGACATGGCCAACACCAAGGGCCACACAGCAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCGCTGTCCTTCGAGTTaGCTCGAACATGGCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFRCPSS*LEHGLQ Trigger: TTGGAGGCCATGTTCGAGCAAACTCGAAGGACAGCG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCATTGCTGTGTGGCCCTaGGTGTTGGCCATGTCTACG | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFIAVWP*VLAMST Trigger: CGTAGACATGGCCAACACCAAGGGCCACACAGCAAT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCCACTGTCACTGCTGCTaGTGTCCCTGCATGATGACT | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFHCHCC*CPCMMT Trigger: AGTCATCATGCAGGGACACAAGCAGCAGTGACAGTG...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCAGCCAGTATGAAGCATaGCTGTGTGGCCCTTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFSQYEA*LCGPWC Trigger: ACACCAAGGGCCACACAGCAATGCTTCATACTGGCT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTCCAAGAAGACAAGTTaGCCACTGCCACACCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFSKKTS*PLPHPL Trigger: AAGGGGGTGTGGCAGTGGCAAACTTGTCTTCTTGGA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS TCA 90 bp | CAAGTCATAAATTCTCCTTTTATTTTGGGATGCCATGAGCCAGTATaGAGCATTGCTGTGTGGCCCTTGGTGTTGGCCATGTCTACGATA | + |
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Preference number: 5 (lower is better) Translates to: QVINSPFILGCHEPV*SIAVWPLVLAMSTI Trigger: TATCGTAGACATGGCCAACACCAAGGGCCACACAGCAATGCTTCATACTGGCTCATGGCATCCCAAAATAAAAGGAGAATTTATGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCTCTCTGTCAATAACCTaGGCCTGTGAGCTTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFSLSIT*ACELPE Trigger: TTCTGGAAGCTCACAGGCCAAGGTTATTGACAGAGA...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGATTTCATAGACCCTTaGGAAAGTCCTGCGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFDFIDP*ESPALQ Trigger: TTGGAGCGCAGGACTTTCCAAAGGGTCTATGAAATC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGGTCGTAGTACACTTTaGCCAGTCCATTTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFGRSTL*PVHFQF Trigger: GAACTGGAAATGGACTGGCAAAAGTGTACTACGACC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS TCA 90 bp | ACACTCCATGACTTCAAAACCATCTCTGTCAATAACCTTGGCCTGTaGGCTTCCAGAAACAACAAGAATCATGTCTCCTGTGTTACTGTA | + |
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Preference number: 5 (lower is better) Translates to: TLHDFKTISVNNLGL*ASRNNKNHVSCVTV Trigger: TACAGTAACACAGGAGACATGATTCTTGTTGTTTCTGGAAGCTCACAGGCCAAGGTTATTGACAGAGATGGTTTTGAAGTCATGGAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCATGGCATTCACAAGGTaGAAGGGATCGAAATGCCTT | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFMAFTR*KGSKCL Trigger: AAGGCATTTCGATCCCTTCAACCTTGTGAATGCCAT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCATCATCAGACTCCACTaGGGCAAACATGGTTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFIIRLH*GKHGFW Trigger: CCAAAAACCATGTTTGCCCAAGTGGAGTCTGATGAT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCGGGCAAACATGGTTTTaGGCTGAGTTTTGGAATATG | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFGQTWF*AEFWNM Trigger: CATATTCCAAAACTCAGCCAAAAACCATGTTTGCCC...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTATCCTATCCTGTTGCTCCATGCAAATAGCTCTTCAACGAGATTCAATTCTCCTTTTATTTaGGGATGCCATGAGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: KTLYPILLLHANSSSTRFNSPFI*GCHEPV Trigger: TACTGGCTCATGGCATCCCAAAATAAAAGGAGAATT...GAATCTCGTTGAAGAGCTATTTGCATGGAGCAACAGGATAGGATACAGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CCA 72 bp | CTGTCTGGGTCAACAAGCAATGGTGACAGCCACCTCTaGCCCAGCCTTCCAAATACTGGTTCCGCCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LSGSTSNGDSHL*PSLPNTGSASV Trigger: AACACTGGCGGAACCAGTATTTGGAAGGCTGGGCCAGAGGTGGCTGTCACCATTGCTTGTTGACCCAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227371.2 |
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| CDS CAA 90 bp | CCACTGCCACACCCCCTTTGGACAGAGGTACCGGTAACTATGAGTTaGTCGTCAGGGCTGAAGCAGCAGTCGGTCATTGGGAACAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: PLPHPLWTEVPVTMS*SSGLKQQSVIGNKV Trigger: TACCTTGTTCCCAATGACCGACTGCTGCTTCAGCCCTGACGACAAACTCATAGTTACCGGTACCTCTGTCCAAAGGGGGTGTGGCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS GCA 72 bp | ATGAATCAGAACTGTCGTCACTCTCACTGTCACTGCTaGTTGTGTCCCTGCATGATGACTGTGAGCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: MNQNCRHSHCHC*LCPCMMTVSAL Trigger: GAGAGCGCTCACAGTCATCATGCAGGGACACAAGCAGCAGTGACAGTGAGAGTGACGACAGTTCTGATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS GCA 72 bp | CAGATGAATCAGAACTGTCGTCACTCTCACTGTCACTaGTGCTTGTGTCCCTGCATGATGACTGTGAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: QMNQNCRHSHCH*CLCPCMMTVSA Trigger: AGCGCTCACAGTCATCATGCAGGGACACAAGCAGCAGTGACAGTGAGAGTGACGACAGTTCTGATTCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS GCA 72 bp | GGGTCCAGACCCAGAGCAGAAACTGTTTTAGTGCCATaGCTCAGTGTTATCTCATGCGAGTCAGGAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: GSRPRAETVLVP*LSVISCESGIL Trigger: GAGGATTCCTGACTCGCATGAGATAACACTGAGGCATGGCACTAAAACAGTTTCTGCTCTGGGTCTGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CAA 72 bp | CTTTTATTTTGGGATGCCATGAGCCAGTATGAAGCATaGCTGTGTGGCCCTTGGTGTTGGCCATGTCTACGA | + |
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Preference number: 6 (lower is better) Translates to: LLFWDAMSQYEA*LCGPWCWPCLR Trigger: TCGTAGACATGGCCAACACCAAGGGCCACACAGCAATGCTTCATACTGGCTCATGGCATCCCAAAATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CAA 90 bp | TGTCCCTGCATGATGACTGTGAGCGCTCTCTGGCTGCACTCGAGCTaGACGGTGCTGGCTCCATATCTTCAATTTGTTTTCTTAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: CPCMMTVSALWLHSS*TVLAPYLQFVFLIL Trigger: AAGAATTAAGAAAACAAATTGAAGATATGGAGCCAGCACCGTCAAGCTCGAGTGCAGCCAGAGAGCGCTCACAGTCATCATGCAGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS GCA 72 bp | GAAACTGTTTTAGTGCCATGCCTCAGTGTTATCTCATaGGAGTCAGGAATCCTCTGGACAGGGTTATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ETVLVPCLSVIS*ESGILWTGLSS Trigger: AGAGGATAACCCTGTCCAGAGGATTCCTGACTCGCATGAGATAACACTGAGGCATGGCACTAAAACAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CCA 72 bp | GTGTGGCCCTTGGTGTTGGCCATGTCTACGATATACTaGTCTCCCTTTATACACTCCATGACTTCAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: VWPLVLAMSTIY*SPFIHSMTSKP Trigger: TGGTTTTGAAGTCATGGAGTGTATAAAGGGAGACCAGTATATCGTAGACATGGCCAACACCAAGGGCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CAA 90 bp | CCCTTTATACACTCCATGACTTCAAAACCATCTCTGTCAATAACCTaGGCCTGTGAGCTTCCAGAAACAACAAGAATCATGTCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PFIHSMTSKPSLSIT*ACELPETTRIMSPV Trigger: CACAGGAGACATGATTCTTGTTGTTTCTGGAAGCTCACAGGCCAAGGTTATTGACAGAGATGGTTTTGAAGTCATGGAGTGTATAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS TCA 72 bp | GAATCATGTCTCCTGTGTTACTGTACTGTAACGACTTaGTCTGATGGCATTCACAAGGTTGAAGGGATCGAA | + |
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Preference number: 6 (lower is better) Translates to: ESCLLCYCTVTT*SDGIHKVEGIE Trigger: TTCGATCCCTTCAACCTTGTGAATGCCATCAGATCAAGTCGTTACAGTACAGTAACACAGGAGACATGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS TCA 72 bp | GACTTCAAAACCATCTCTGTCAATAACCTTGGCCTGTaGGCTTCCAGAAACAACAAGAATCATGTCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: DFKTISVNNLGL*ASRNNKNHVSC Trigger: ACAGGAGACATGATTCTTGTTGTTTCTGGAAGCTCACAGGCCAAGGTTATTGACAGAGATGGTTTTGAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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| CDS CAA 72 bp | CACTCCATGACTTCAAAACCATCTCTGTCAATAACCTaGGCCTGTGAGCTTCCAGAAACAACAAGAATCATG | + |
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Preference number: 6 (lower is better) Translates to: HSMTSKPSLSIT*ACELPETTRIM Trigger: CATGATTCTTGTTGTTTCTGGAAGCTCACAGGCCAAGGTTATTGACAGAGATGGTTTTGAAGTCATGGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045766.8 |
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