RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040560

Ensembl transcript IDs: ENSMUST00000072726.7, ENSMUST00000235428.2, ENSMUST00000235648.2, ENSMUST00000236879.2, ENSMUST00000236956.2

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCGCTCGAGACACTGTGTAGGTTCCCTTGCCTACGCCCTCCGCTaGTGGCAGCTTCCTTCCTACTTCTGCTTTCGCATGCAGCAGTTT +
Preference number: 1 (lower is better)
Translates to: DRSRHCVGSLAYALR*WQLPSYFCFRMQQF
Trigger: AAACTGCTGCATGCGAAAGCAGAAGTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGCAAGGGAACCTACACAGTGTCTCGAGCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 90 bp ACTTTGGCTTCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTaGATGGCTTCCGCCGTGACGCCAGGTGATATGACATGGTCCATA +
Preference number: 1 (lower is better)
Translates to: TLASGPEASGAAAIV*MASAVTPGDMTWSI
Trigger: TATGGACCATGTCATATCACCTGGCGTCACGGCGGAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGAAGCCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 90 bp CGCTCGAGACACTGTGTAGGTTCCCTTGCCTACGCCCTCCGCTGCTaGCAGCTTCCTTCCTACTTCTGCTTTCGCATGCAGCAGTTTTCC +
Preference number: 1 (lower is better)
Translates to: RSRHCVGSLAYALRC*QLPSYFCFRMQQFS
Trigger: GGAAAACTGCTGCATGCGAAAGCAGAAGTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGCAAGGGAACCTACACAGTGTCTCGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp CGGCAGGAACGGCTTCGTCACAAGCGTTCAGTATCTCCACTGCTGTaGTTCCCATTGCACAACGATCCAGCGCACCAGTGTCCATCTGCC +
Preference number: 1 (lower is better)
Translates to: RQERLRHKRSVSPLL*FPLHNDPAHQCPSA
Trigger: GGCAGATGGACACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTGTGACGAAGCCGTTCCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 90 bp TCCCTTGCCTACGCCCTCCGCTGCTGGCAGCTTCCTTCCTACTTCTaGTTTCGCATGCAGCAGTTTTCCAGCAGCCTGATTATAACCGGG +
Preference number: 1 (lower is better)
Translates to: SLAYALRCWQLPSYF*FRMQQFSSSLIITG
Trigger: CCCGGTTATAATCAGGCTGCTGGAAAACTGCTGCATGCGAAAGCAGAAGTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 90 bp AAGGGCGGCGAGACTCCGTCTTGTCATGGCTTGTTTCAGGTTGACTaGTGGATGACTAAGAGAGTCTACAGCGGCAGGAACGGCTTCGTC +
Preference number: 1 (lower is better)
Translates to: KGGETPSCHGLFQVD*WMTKRVYSGRNGFV
Trigger: GACGAAGCCGTTCCTGCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACGGAGTCTCGCCGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 90 bp GGCGGCGAGACTCCGTCTTGTCATGGCTTGTTTCAGGTTGACTGCTaGATGACTAAGAGAGTCTACAGCGGCAGGAACGGCTTCGTCACA +
Preference number: 1 (lower is better)
Translates to: GGETPSCHGLFQVDC*MTKRVYSGRNGFVT
Trigger: TGTGACGAAGCCGTTCCTGCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACGGAGTCTCGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 90 bp GCTCCAGCCTTGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTaGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGTGCCAGGTCT +
Preference number: 1 (lower is better)
Translates to: APALFNLSLHNVTGG*RGIPRLREVWGARS
Trigger: AGACCTGGCACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGGCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp CCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTaGGGAAGGACAGAGCAACATCGGCCTAGACAATACAGAATTGAC +
Preference number: 1 (lower is better)
Translates to: PWMALRGQEASNSPV*GRTEQHRPRQYRID
Trigger: GTCAATTCTGTATTGTCTAGGCCGATGTTGCTCTGTCCTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 90 bp GCGAGACTCCGTCTTGTCATGGCTTGTTTCAGGTTGACTGCTGGATaGCTAAGAGAGTCTACAGCGGCAGGAACGGCTTCGTCACAAGCG +
Preference number: 1 (lower is better)
Translates to: ARLRLVMACFRLTAG*LRESTAAGTASSQA
Trigger: CGCTTGTGACGAAGCCGTTCCTGCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACGGAGTCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 90 bp TACAGCGGCAGGAACGGCTTCGTCACAAGCGTTCAGTATCTCCACTaGTGTGATTCCCATTGCACAACGATCCAGCGCACCAGTGTCCAT +
Preference number: 1 (lower is better)
Translates to: YSGRNGFVTSVQYLH*CDSHCTTIQRTSVH
Trigger: ATGGACACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTGTGACGAAGCCGTTCCTGCCGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp TGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGATCCAAGCTaGGGTGAAGCTGGGGACTATGGATGTCAAACAGCCAGAGCGAGC +
Preference number: 1 (lower is better)
Translates to: WDDNARFTSVLRDPS*GEAGDYGCQTARAS
Trigger: GCTCGCTCTGGCTGTTTGACATCCATAGTCCCCAGCTTCACCTCAGCTTGGATCCCTCAACACTGAGGTGAACCTTGCATTGTCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 90 bp GGCTTCGTCACAAGCGTTCAGTATCTCCACTGCTGTGATTCCCATTaGACAACGATCCAGCGCACCAGTGTCCATCTGCCAGACATACAC +
Preference number: 1 (lower is better)
Translates to: GFVTSVQYLHCCDSH*TTIQRTSVHLPDIH
Trigger: GTGTATGTCTGGCAGATGGACACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTGTGACGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 90 bp ACACTTGACAAGCAACCTGCAGTGATGTCATCATCCACCAGGTCATaGTCTTCTTCCTGGACTTTGGCTTCTGGGCCCGAGGCATCTGGA +
Preference number: 1 (lower is better)
Translates to: TLDKQPAVMSSSTRS*SSSWTLASGPEASG
Trigger: TCCAGATGCCTCGGGCCCAGAAGCCAAAGTCCAGGAAGAAGAGCATGACCTGGTGGATGATGACATCACTGCAGGTTGCTTGTCAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp TCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTaGGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGG +
Preference number: 1 (lower is better)
Translates to: SGREKLPSDRMVASC*VVCVCLSIDRLPMW
Trigger: CCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 90 bp TCAGCGACATATGACCTCCTCTCGATAGGAGACCAAAGGACACCGTaGAGTGCGGTTTCAGCATTCCGAGGCGATCGAGACAAACTTCAT +
Preference number: 1 (lower is better)
Translates to: SATYDLLSIGDQRTP*SAVSAFRGDRDKLH
Trigger: ATGAAGTTTGTCTCGATCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTCTCCTATCGAGAGGAGGTCATATGTCGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 90 bp GAGGCCTCAGAAGCCAAAAGGTTCGTTGCAAGGGTTTGCAGCTTATaGTGGGCCATATTTTTAAGGGCGGCGAGACTCCGTCTTGTCATG +
Preference number: 1 (lower is better)
Translates to: EASEAKRFVARVCSL*WAIFLRAARLRLVM
Trigger: CATGACAAGACGGAGTCTCGCCGCCCTTAAAAATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTCTGAGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp TCTGGGGTGCCAGGTCTAGGCGGCCTGGTGGGGCCCTTCTTCATGTaGTCGCCAATGAAAGTTGCATTGGTCATACTCATTAAAGTATTC +
Preference number: 1 (lower is better)
Translates to: SGVPGLGGLVGPFFM*SPMKVALVILIKVF
Trigger: GAATACTTTAATGAGTATGACCAATGCAACTTTCATTGGCGATCACATGAAGAAGGGCCCCACCAGGCCGCCTAGACCTGGCACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp CTTCTGAATATACACACAGGGCACGGAAGGACTGGCCTGGACCTGTaGCCAGAGTTTGTGACCTCATTGCTTTGTGCCCATCTCTATGAT +
Preference number: 1 (lower is better)
Translates to: LLNIHTGHGRTGLDL*PEFVTSLLCAHLYD
Trigger: ATCATAGAGATGGGCACAAAGCAATGAGGTCACAAACTCTGGTCACAGGTCCAGGCCAGTCCTTCCGTGCCCTGTGTGTATATTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 90 bp CACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTaGGGGATCCAAGCTGAGGTGAAGCTGGGGACTATGGATGTCAAA +
Preference number: 1 (lower is better)
Translates to: HYKGTGMTMQGSPQC*GIQAEVKLGTMDVK
Trigger: TTTGACATCCATAGTCCCCAGCTTCACCTCAGCTTGGATCCCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 90 bp CCAGTTAGGAAAGAGCCCCCTTTGTCTGAACTGCCAGATGCTTTCTaGAGATTCTCTGGGGAAATAAGTGCAGTATTCGGCCTAGAGGCT +
Preference number: 1 (lower is better)
Translates to: PVRKEPPLSELPDAF*RFSGEISAVFGLEA
Trigger: AGCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAGAATCTGCAGAAAGCATCTGGCAGTTCAGACAAAGGGGGCTCTTTCCTAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp TTAGTGACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTaGATATACACACAGGGCACGGAAGGACTGGCCTGGACCTGTGAC +
Preference number: 1 (lower is better)
Translates to: LVTLPAWSFIVLVLF*IYTQGTEGLAWTCD
Trigger: GTCACAGGTCCAGGCCAGTCCTTCCGTGCCCTGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 90 bp ACTGGTTTAACTTCTCGCTCTGAAGTTCATACAGTAAACCTGCGCTaGGCAGACGCAGACTCTAGAGGCTGCTGGACATTTCTCCATCTA +
Preference number: 1 (lower is better)
Translates to: TGLTSRSEVHTVNLR*ADADSRGCWTFLHL
Trigger: TAGATGGAGAAATGTCCAGCAGCCTCTAGAGTCTGCGTCTGCTCAGCGCAGGTTTACTGTATGAACTTCAGAGCGAGAAGTTAAACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CCA 90 bp AGAAGGTGTTCCTTTATGTTCTCTTTGATAGTTTCTTTCACTTGCTaGAAAAGAACCGCTGCTCGCTTCCCAGTTAGGAAAGAGCCCCCT +
Preference number: 1 (lower is better)
Translates to: RRCSFMFSLIVSFTC*KRTAARFPVRKEPP
Trigger: AGGGGGCTCTTTCCTAACTGGGAAGCGAGCAGCGGTTCTTTTCCAGCAAGTGAAAGAAACTATCAAAGAGAACATAAAGGAACACCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp CACACAAGTGTCGCATCATGTCACCTTTTGCTTGTAAGTTACCAGTaGAGCCACATATGTCTTTATATTTACAGGGACGGGTCCAAGTGC +
Preference number: 1 (lower is better)
Translates to: HTSVASCHLLLVSYQ*SHICLYIYRDGSKC
Trigger: GCACTTGGACCCGTCCCTGTAAATATAAAGACATATGTGGCTTCACTGGTAACTTACAAGCAAAAGGTGACATGATGCGACACTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 90 bp GAAATAAGTGCAGTATTCGGCCTAGAGGCTTCTTCAGTCAGGAGTTaGATAATCAAAGCTTCCACATCAAAGAAAAGCACATGGATATCC +
Preference number: 1 (lower is better)
Translates to: EISAVFGLEASSVRS*IIKASTSKKSTWIS
Trigger: GGATATCCATGTGCTTTTCTTTGATGTGGAAGCTTTGATTATTCAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGCACTTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 90 bp AAAAGCACATGGATATCCGGGTCTGTTAGGTTTGTCTTTATTGCTTaGACCATCAGGGAGTTATGGGAATATTTAGGTAAATTACCCTTG +
Preference number: 1 (lower is better)
Translates to: KSTWISGSVRFVFIA*TIRELWEYLGKLPL
Trigger: CAAGGGTAATTTACCTAAATATTCCCATAACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAACAGACCCGGATATCCATGTGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR GCA 90 bp CGGTCCTGCCATCTTCGAGCTAGCATCTCCAGGAGAGGAGGCCTGAATCTCTCCGCCTACGCCCTCCGCTaGTGGCAGCTTCCTTCCTAC +
Preference number: 2 (lower is better)
Translates to: RSCHLRASISRRGGLNLSAYALR*WQLPSY
Trigger: GTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGC...GGAGAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCTCGAAGATGGCAGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR TCA 90 bp GGAGGGTGGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGTGCCAGGTCTAGGAGGTTGACTGCTGGATaGCTAAGAGAGTCTACAGCG +
Preference number: 2 (lower is better)
Translates to: GGWRGIPRLREVWGARSRRLTAG*LRESTA
Trigger: CGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCT...CCTAGACCTGGCACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CCA 90 bp CCTGCCTGCTCAATCCTTCTCAGCTCAGCTAGAAGCAGGGCCTGTGCAGCCTCTGTAGGGTCAGTGGCTTaGACTTGCTGGCCCGGTACT +
Preference number: 2 (lower is better)
Translates to: PACSILLSSARSRACAASVGSVA*TCWPGT
Trigger: AGTACCGGGCCAGCAAGTCCAAGCCACTGACCCTAC...AGAGGCTGCACAGGCCCTGCTTCTAGCTGAGCTGAGAAGGATTGAGCAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR GCA 90 bp GGAGGGTGGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGTGCCAGGTCTAGGCTGCCAGATGCTTTCTaGAGATTCTCTGGGGAAATA +
Preference number: 2 (lower is better)
Translates to: GGWRGIPRLREVWGARSRLPDAF*RFSGEI
Trigger: TATTTCCCCAGAGAATCTGCAGAAAGCATCTGGCAG...CCTAGACCTGGCACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CCA 90 bp GGAGGGTGGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGTGCCAGGTCTAGGTTTCAGGTTGACTGCTaGATGACTAAGAGAGTCTAC +
Preference number: 2 (lower is better)
Translates to: GGWRGIPRLREVWGARSRFQVDC*MTKRVY
Trigger: GTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAA...CCTAGACCTGGCACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR TCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGAGCAACAGCCCAGTCTaGGGAAGGACAGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRESNSPV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCAGACTGGGCTGTTGCT...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR GCA 90 bp CCATATACTGAGGTAAGTAAGGAGCCCAGGTGTCGATCGTCTCCTTCCGTCCTGACACAGAGCCGTCTGTaGATCCCACCACCAGGTAGT +
Preference number: 2 (lower is better)
Translates to: PYTEVSKEPRCRSSPSVLTQSRL*IPPPGS
Trigger: ACTACCTGGTGGTGGGATGCACAGACGGCTCTGTGT...CAGGACGGAAGGAGACGATCGACACCTGGGCTCCTTACTTACCTCAGTATATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR TCA 90 bp CATCGGTCCTGCCATCTTCGAGCTAGCATCTCCAGGAGAGGAGGCCTGAATCTCTATTCGCCAGGGATATaGTGGACAACAGATGCTGAG +
Preference number: 2 (lower is better)
Translates to: HRSCHLRASISRRGGLNLYSPGI*WTTDAE
Trigger: CTCAGCATCTGTTGTCCATCATATCCCTGGCGAATA...GAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCTCGAAGATGGCAGGACCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR GCA 90 bp CATCGGTCCTGCCATCTTCGAGCTAGCATCTCCAGGAGAGGAGGCCTGAATCTCTTCGTTGCAAGGGTTTaGAGCTTATGGTGGGCCATA +
Preference number: 2 (lower is better)
Translates to: HRSCHLRASISRRGGLNLFVARV*SLWWAI
Trigger: TATGGCCCACCATAAGCTGCAAACCCTTGCAACGAA...GAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCTCGAAGATGGCAGGACCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CAA 90 bp GTGGGCCATATTTTTAAGGGCGGCGAGACTCCGTCTTGTCATGGCTaGTTTCAGGTTGACTGCTGGATGACTAAGAGAGTCTACAGCGGC +
Preference number: 2 (lower is better)
Translates to: VGHIFKGGETPSCHG*FQVDCWMTKRVYSG
Trigger: GCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACGGAGTCTCGCCGCCCTTAAAAATATGGCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR TCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGATGGTCGCATCCTGTTaGGTGGTATGTGTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRMVASC*VVCVCL
Trigger: AAGGCACACACATACCACTCAACAGGATGCGACCAT...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp GACTTTGGCTTCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTGCATGGCTCTTCAGTCAGGAGTTaGATAATCAAAGCTTCCACA +
Preference number: 2 (lower is better)
Translates to: DFGFWARGIWSSCHSLHGSSVRS*IIKAST
Trigger: TGTGGAAGCTTTGATTATTCAACTCCTGACTGAAGA...GCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGAAGCCAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR GCA 90 bp CCTCAGAAGCCAAAAGGTTCGTTGCAAGGGTTTGCAGCTTATGGTGGGCCATATTGCTGTGATTCCCATTaGACAACGATCCAGCGCACC +
Preference number: 2 (lower is better)
Translates to: PQKPKGSLQGFAAYGGPYCCDSH*TTIQRT
Trigger: GGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCA...ATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR GCA 90 bp CTCGATAGGAGACCAAAGGACACCGTGCAGTGCGGTTTCAGCATTCCGAGGCGATTGTTTCAGGTTGACTaGTGGATGACTAAGAGAGTC +
Preference number: 2 (lower is better)
Translates to: LDRRPKDTVQCGFSIPRRLFQVD*WMTKRV
Trigger: GACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAA...TCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTCTCCTATCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGACTGGCCTGGACCTGTaGCCAGAGTTTGTGACCTCA +
Preference number: 2 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRTGLDL*PEFVTS
Trigger: TGAGGTCACAAACTCTGGTCACAGGTCCAGGCCAGT...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp CCTGATTATAACCGGGAAGCATCAGCGACATATGACCTCCTCTCGATAGGAGACCTCCACTTGATCACCTaGATAGGAAAGAGGTGGCGA +
Preference number: 2 (lower is better)
Translates to: PDYNREASATYDLLSIGDLHLIT*IGKRWR
Trigger: TCGCCACCTCTTTCCTATTCAGGTGATCAAGTGGAG...GTCTCCTATCGAGAGGAGGTCATATGTCGCTGATGCTTCCCGGTTATAATCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR TCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTGGAGGAGGCCTTTTCTaGGCAGGAGAACCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSGGGLF*AGEPSD
Trigger: GTCACTAGGTTCTCCTGCTCAGAAAAGGCCTCCTCC...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp GGCCATATTTTTAAGGGCGGCGAGACTCCGTCTTGTCATGGCTTGTTTCAGGTTGTATCTCCACTGCTGTaGTTCCCATTGCACAACGAT +
Preference number: 2 (lower is better)
Translates to: GHIFKGGETPSCHGLFQVVSPLL*FPLHND
Trigger: ATCGTTGTGCAATGGGAATCACAGCAGTGGAGATAC...AACCTGAAACAAGCCATGACAAGACGGAGTCTCGCCGCCCTTAAAAATATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGTGCCCCCATGAAGCATaGGCAAATGACATAGACCGG +
Preference number: 2 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRCPHEA*ANDIDR
Trigger: CCGGTCTATGTCATTTGCGCATGCTTCATGGGGGCA...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR GCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTGCCCATGTGGAATCTaGCCCCATGAAGCATGCGCA +
Preference number: 2 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDCPCGI*PHEACA
Trigger: TGCGCATGCTTCATGGGGGCAGATTCCACATGGGCA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGCAACAGCCCAGTCTaGGGAAGGACAGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSSNSPV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCAGACTGGGCTGTTGCT...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGTGTGACCAGAGTTTGTaGCCTCATTGCTTTGTGCCC +
Preference number: 2 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRCDQSL*PHCFVP
Trigger: GGGCACAAAGCAATGAGGTCACAAACTCTGGTCACA...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR GCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTTGCCCCCATGAAGCATaGGCAAATGACATAGACCGG +
Preference number: 2 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSCPHEA*ANDIDR
Trigger: CCGGTCTATGTCATTTGCGCATGCTTCATGGGGGCA...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTATGGTCGCATCCTGTTaGGTGGTATGTGTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSMVASC*VVCVCL
Trigger: AAGGCACACACATACCACTCAACAGGATGCGACCAT...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CCA 90 bp CCTGATTATAACCGGGAAGCATCAGCGACATATGACCTCCTCTCGATAGGAGACTCAAAGAAAAGCACATaGATATCCGGGTCTGTTAGG +
Preference number: 2 (lower is better)
Translates to: PDYNREASATYDLLSIGDSKKST*ISGSVR
Trigger: CCTAACAGACCCGGATATCCATGTGCTTTTCTTTGA...GTCTCCTATCGAGAGGAGGTCATATGTCGCTGATGCTTCCCGGTTATAATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR TCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACGAGAACTGTCGGTTGTaGAGAGCCCAAGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHENCRL*RAQGEE
Trigger: CTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTC...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTCCACCAATGTAACTTaGCACAAGAGGAGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDSTNVT*HKRRVE
Trigger: CTCCACTCTCCTCTTGTGTCAAGTTACATTGGTGGA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAACAGTAAACCTGCGCTaGGCAGACGCAGACTCTAGA +
Preference number: 2 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTTVNLR*ADADSR
Trigger: TCTAGAGTCTGCGTCTGCTCAGCGCAGGTTTACTGT...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGTTGTGCCCATCTCTATaGTGTGATACCATCTGTCAT +
Preference number: 2 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRLCPSL*CDTICH
Trigger: ATGACAGATGGTATCACATCATAGAGATGGGCACAA...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACACGGAAGGACTGGCCTaGACCTGTGACCAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHTEGLA*TCDQSL
Trigger: CAAACTCTGGTCACAGGTCCAGGCCAGTCCTTCCGT...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CAA 90 bp CACCAATGTAACTTGACACAAGAGGAGAGTGGAGTTAAGTTTGGGTaGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTG +
Preference number: 2 (lower is better)
Translates to: HQCNLTQEESGVKFG*KCGHFHSSVHSNRL
Trigger: CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGTCAAGTTACATTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACATCCACCAATGTAACTTaGCACAAGAGGAGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTSTNVT*HKRRVE
Trigger: CTCCACTCTCCTCTTGTGTCAAGTTACATTGGTGGA...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACAGTAAACCTGCGCTaGGCAGACGCAGACTCTAGA +
Preference number: 2 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKTVNLR*ADADSR
Trigger: TCTAGAGTCTGCGTCTGCTCAGCGCAGGTTTACTGT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGTCACTGGTCATAATCTaGAAGGCCAGGTTGAAATGC +
Preference number: 2 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLSLVII*KARLKC
Trigger: GCATTTCAACCTGGCCTTCCAGATTATGACCAGTGA...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACAGACTTCTAGGATGCTaGCTTAAATGCTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDRLLGC*LKCFPS
Trigger: ACTAGGAAAGCATTTAAGTCAGCATCCTAGAAGTCT...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACACAAGGGTACTGGGATaGCAATGCAAGGTTCACCTC +
Preference number: 2 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHTRVLG*QCKVHL
Trigger: GAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGT...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGAGTGCAGTCACACTaGTTAATGAGTCCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGVQSH*LMSPRL
Trigger: AAGCCTGGGACTCATTAACCAGTGTGACTGCACTCC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAAAACAACAGCGTGTCTaGGAAATCCAAAGGGAAGTC +
Preference number: 2 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTKQQRV*EIQREV
Trigger: GACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTT...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CAA 90 bp GGAAATAAGTGCAGTATTCGGCCTAGAGGCTTCTTCAGTCAGGAGTaGAATAATCAAAGCTTCCACATCAAAGAAAAGCACATGGATATC +
Preference number: 2 (lower is better)
Translates to: GNKCSIRPRGFFSQE*NNQSFHIKEKHMDI
Trigger: GATATCCATGTGCTTTTCTTTGATGTGGAAGCTTTGATTATTCAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGCACTTATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGAGTTTAAGACTAAATaGTCTCACCATTTTAGTTCC +
Preference number: 2 (lower is better)
Translates to: KTLQGYWDDNARFTSVLREFKTK*SHHFSS
Trigger: GGAACTAAAATGGTGAGAGCATTTAGTCTTAAACTC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR GCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGCAGACTCTAGAGGCTaGTGGACATTTCTCCATCTA +
Preference number: 2 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKADSRG*WTFLHL
Trigger: TAGATGGAGAAATGTCCAGCAGCCTCTAGAGTCTGC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR TCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAATTTTCTGTACACTCTaGACAATGTGTCTACACAGT +
Preference number: 2 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTIFCTL*TMCLHS
Trigger: ACTGTGTAGACACATTGTTCAGAGTGTACAGAAAAT...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR GCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGTCCACTATACAAATATaGTTGCTCCTAAACTTGGTT +
Preference number: 2 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLSTIQI*LLLNLV
Trigger: AACCAAGTTTAGGAGCAAGCATATTTGTATAGTGGA...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTGTACAGTTCTTaGTTTCTTTCTTGGAAGCTA +
Preference number: 2 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKTLYSS*FLSWKL
Trigger: TAGCTTCCAAGAAAGAAACCAAGAACTGTACAGTGT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 72 bp GGAGCCCAGGTGTCGATCGTCTCCTTCCGTCCTGCCTaGTCAATCCTTCTCAGCTCAGCTAGAAGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: GAQVSIVSFRPA*SILLSSARSRA
Trigger: GGCCCTGCTTCTAGCTGAGCTGAGAAGGATTGAGCAGGCAGGACGGAAGGAGACGATCGACACCTGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp TCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTaGATGGCTTCCGCCGTGACGCCAGGTGATATGACA +
Preference number: 3 (lower is better)
Translates to: SGPEASGAAAIV*MASAVTPGDMT
Trigger: TGTCATATCACCTGGCGTCACGGCGGAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp CAGTGTCCATCTGCCAGACATACACAGAGCCGTCTGTaGATCCCACCACCAGGTAGTCGTCGGAAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: QCPSARHTQSRL*IPPPGSRRKAS
Trigger: GGAGGCCTTCCGACGACTACCTGGTGGTGGGATGCACAGACGGCTCTGTGTATGTCTGGCAGATGGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 72 bp TTCTTCCTGGACTTTGGCTTCTGGGCCCGAGGCATCTaGAGCAGCTGCCATAGTCTGCATGGCTTCCGCCGT +
Preference number: 3 (lower is better)
Translates to: FFLDFGFWARGI*SSCHSLHGFRR
Trigger: ACGGCGGAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGAAGCCAAAGTCCAGGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 72 bp GAAGCATGCGCAAATGACATAGACCGGCCATGGCCCTaGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGC +
Preference number: 3 (lower is better)
Translates to: EACANDIDRPWP*MALRGQEASNS
Trigger: GCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGCCATGGCCGGTCTATGTCATTTGCGCATGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CAA 90 bp CGGTCCTGCCATCTTCGAGCTAGCATCTCCAGGAGAGGAGGCCTGAATCTCTCCGTTCGTTGCAAGGGTTaGCAGCTTATGGTGGGCCAT +
Preference number: 3 (lower is better)
Translates to: RSCHLRASISRRGGLNLSVRCKG*QLMVGH
Trigger: ATGGCCCACCATAAGCTGCAAACCCTTGCAACGAAC...GGAGAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCTCGAAGATGGCAGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp AGACACTGTGTAGGTTCCCTTGCCTACGCCCTCCGCTaGTGGCAGCTTCCTTCCTACTTCTGCTTTCGCATG +
Preference number: 3 (lower is better)
Translates to: RHCVGSLAYALR*WQLPSYFCFRM
Trigger: CATGCGAAAGCAGAAGTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGCAAGGGAACCTACACAGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 72 bp GCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTaGGGAAGGACAGAGCAACATCGGCCTAGACAATAC +
Preference number: 3 (lower is better)
Translates to: ALRGQEASNSPV*GRTEQHRPRQY
Trigger: GTATTGTCTAGGCCGATGTTGCTCTGTCCTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp TCGGTTGTGAAGAGCCCAAGGGGAGGAGGCCTTTTCTaGGCAGGAGAACCTAGTGACACATGGGTGATGCTC +
Preference number: 3 (lower is better)
Translates to: SVVKSPRGGGLF*AGEPSDTWVML
Trigger: GAGCATCACCCATGTGTCACTAGGTTCTCCTGCTCAGAAAAGGCCTCCTCCCCTTGGGCTCTTCACAACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 72 bp CCTCCTCTCGATAGGAGACCAAAGGACACCGTGCAGTaGGGTTTCAGCATTCCGAGGCGATCGAGACAAACT +
Preference number: 3 (lower is better)
Translates to: PPLDRRPKDTVQ*GFSIPRRSRQT
Trigger: AGTTTGTCTCGATCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTCTCCTATCGAGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp TATGACCTCCTCTCGATAGGAGACCAAAGGACACCGTaGAGTGCGGTTTCAGCATTCCGAGGCGATCGAGAC +
Preference number: 3 (lower is better)
Translates to: YDLLSIGDQRTP*SAVSAFRGDRD
Trigger: GTCTCGATCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTCTCCTATCGAGAGGAGGTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp TACGCCCTCCGCTGCTGGCAGCTTCCTTCCTACTTCTaGTTTCGCATGCAGCAGTTTTCCAGCAGCCTGATT +
Preference number: 3 (lower is better)
Translates to: YALRCWQLPSYF*FRMQQFSSSLI
Trigger: AATCAGGCTGCTGGAAAACTGCTGCATGCGAAAGCAGAAGTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp CTCTCCAGCCCCAGCAGGTCAGGCAACATAACACAGTaGATGGCGGCTAACTGGCTCCAGCCTTGTTTAATC +
Preference number: 3 (lower is better)
Translates to: LSSPSRSGNITQ*MAANWLQPCLI
Trigger: GATTAAACAAGGCTGGAGCCAGTTAGCCGCCATGCACTGTGTTATGTTGCCTGACCTGCTGGGGCTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 72 bp GGTTGTATTCTAGTAGGGTCAGTGGCTTGGACTTGCTaGCCCGGTACTCAGGGTCACTATCCTCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: GCILVGSVAWTC*PGTQGHYPPCS
Trigger: AGAGCAGGGAGGATAGTGACCCTGAGTACCGGGCCAGCAAGTCCAAGCCACTGACCCTACTAGAATACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 72 bp ATACACACAGGGCACGGAAGGACTGGCCTGGACCTGTaGCCAGAGTTTGTGACCTCATTGCTTTGTGCCCAT +
Preference number: 3 (lower is better)
Translates to: IHTGHGRTGLDL*PEFVTSLLCAH
Trigger: ATGGGCACAAAGCAATGAGGTCACAAACTCTGGTCACAGGTCCAGGCCAGTCCTTCCGTGCCCTGTGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp CGGCTTCGTCACAAGCGTTCAGTATCTCCACTGCTGTaGTTCCCATTGCACAACGATCCAGCGCACCAGTGT +
Preference number: 3 (lower is better)
Translates to: RLRHKRSVSPLL*FPLHNDPAHQC
Trigger: ACACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTGTGACGAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp TGTGCCTTTCAATCGACAGGCTGCCCATGTGGAATCTaGCCCCATGAAGCATGCGCAAATGACATAGACCGG +
Preference number: 3 (lower is better)
Translates to: CAFQSTGCPCGI*PHEACANDIDR
Trigger: CCGGTCTATGTCATTTGCGCATGCTTCATGGGGGCAGATTCCACATGGGCAGCCTGTCGATTGAAAGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 72 bp GTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTaGCCATGTGGAATCTGCCCCCATGAAGCATGCGCA +
Preference number: 3 (lower is better)
Translates to: VEWYVCAFQSTG*PCGICPHEACA
Trigger: TGCGCATGCTTCATGGGGGCAGATTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 72 bp AGGAACGGCTTCGTCACAAGCGTTCAGTATCTCCACTaGTGTGATTCCCATTGCACAACGATCCAGCGCACC +
Preference number: 3 (lower is better)
Translates to: RNGFVTSVQYLH*CDSHCTTIQRT
Trigger: GGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTGTGACGAAGCCGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 72 bp GGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTaGGGGATCCAAGCTGAGGTGAAGCTGGGGACTATG +
Preference number: 3 (lower is better)
Translates to: GTGMTMQGSPQC*GIQAEVKLGTM
Trigger: CATAGTCCCCAGCTTCACCTCAGCTTGGATCCCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp CGTCTTGTCATGGCTTGTTTCAGGTTGACTGCTGGATaGCTAAGAGAGTCTACAGCGGCAGGAACGGCTTCG +
Preference number: 3 (lower is better)
Translates to: RLVMACFRLTAG*LRESTAAGTAS
Trigger: CGAAGCCGTTCCTGCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 72 bp CCAGGTCTAGGCGGCCTGGTGGGGCCCTTCTTCATGTaGTCGCCAATGAAAGTTGCATTGGTCATACTCATT +
Preference number: 3 (lower is better)
Translates to: PGLGGLVGPFFM*SPMKVALVILI
Trigger: AATGAGTATGACCAATGCAACTTTCATTGGCGATCACATGAAGAAGGGCCCCACCAGGCCGCCTAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp ACAAGCGTTCAGTATCTCCACTGCTGTGATTCCCATTaGACAACGATCCAGCGCACCAGTGTCCATCTGCCA +
Preference number: 3 (lower is better)
Translates to: TSVQYLHCCDSH*TTIQRTSVHLP
Trigger: TGGCAGATGGACACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 72 bp ACTCCGTCTTGTCATGGCTTGTTTCAGGTTGACTGCTaGATGACTAAGAGAGTCTACAGCGGCAGGAACGGC +
Preference number: 3 (lower is better)
Translates to: TPSCHGLFQVDC*MTKRVYSGRNG
Trigger: GCCGTTCCTGCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CAA 90 bp GACTTTGGCTTCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTGCATGGCTTAGGTTTGTCTTTATaGCTTGAACCATCAGGGAGT +
Preference number: 3 (lower is better)
Translates to: DFGFWARGIWSSCHSLHGLGLSL*LEPSGS
Trigger: ACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAA...GCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGAAGCCAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 72 bp AATGCAAGGTTCACCTCAGTGTTGAGGGATCCAAGCTaGGGTGAAGCTGGGGACTATGGATGTCAAACAGCC +
Preference number: 3 (lower is better)
Translates to: NARFTSVLRDPS*GEAGDYGCQTA
Trigger: GGCTGTTTGACATCCATAGTCCCCAGCTTCACCTCAGCTTGGATCCCTCAACACTGAGGTGAACCTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 72 bp GAGACTCCGTCTTGTCATGGCTTGTTTCAGGTTGACTaGTGGATGACTAAGAGAGTCTACAGCGGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: ETPSCHGLFQVD*WMTKRVYSGRN
Trigger: GTTCCTGCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACGGAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 72 bp TCCCCTCAGGCAGGGAGAAACTACCTAGTGACAGAATaGTCGCATCCTGTTGAGTGGTATGTGTGTGCCTTT +
Preference number: 3 (lower is better)
Translates to: SPQAGRNYLVTE*SHPVEWYVCAF
Trigger: AAAGGCACACACATACCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CCA 72 bp GAAGCCAAAAGGTTCGTTGCAAGGGTTTGCAGCTTATaGTGGGCCATATTTTTAAGGGCGGCGAGACTCCGT +
Preference number: 3 (lower is better)
Translates to: EAKRFVARVCSL*WAIFLRAARLR
Trigger: ACGGAGTCTCGCCGCCCTTAAAAATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CCA 72 bp TTGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTaGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: LFNLSLHNVTGG*RGIPRLREVWG
Trigger: ACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CAA 90 bp CATCGGTCCTGCCATCTTCGAGCTAGCATCTCCAGGAGAGGAGGCCTGAATCTCTTCTTCAGTCAGGAGTaGAATAATCAAAGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: HRSCHLRASISRRGGLNLFFSQE*NNQSFH
Trigger: GTGGAAGCTTTGATTATTCAACTCCTGACTGAAGAA...GAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCTCGAAGATGGCAGGACCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 72 bp ACTTCTCGCTCTGAAGTTCATACAGTAAACCTGCGCTaGGCAGACGCAGACTCTAGAGGCTGCTGGACATTT +
Preference number: 3 (lower is better)
Translates to: TSRSEVHTVNLR*ADADSRGCWTF
Trigger: AAATGTCCAGCAGCCTCTAGAGTCTGCGTCTGCTCAGCGCAGGTTTACTGTATGAACTTCAGAGCGAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp CTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTaGATATACACACAGGGCACGGAAGGACTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: LPAWSFIVLVLF*IYTQGTEGLAW
Trigger: CCAGGCCAGTCCTTCCGTGCCCTGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 72 bp GCCAGATGCTTTCTGCAGATTCTCTGGGGAAATAAGTaGAGTATTCGGCCTAGAGGCTTCTTCAGTCAGGAG +
Preference number: 3 (lower is better)
Translates to: ARCFLQILWGNK*SIRPRGFFSQE
Trigger: CTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAGAATCTGCAGAAAGCATCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR TCA 72 bp GAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTaGGTGGTATGTGTGTGCCTTTCAATCGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: EKLPSDRMVASC*VVCVCLSIDRL
Trigger: CAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp GCGGCCTGGTGGGGCCCTTCTTCATGTGATCGCCAATaGAAGTTGCATTGGTCATACTCATTAAAGTATTCG +
Preference number: 3 (lower is better)
Translates to: AAWWGPSSCDRQ*KLHWSYSLKYS
Trigger: CGAATACTTTAATGAGTATGACCAATGCAACTTTCATTGGCGATCACATGAAGAAGGGCCCCACCAGGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR GCA 72 bp AAAGAGCCCCCTTTGTCTGAACTGCCAGATGCTTTCTaGAGATTCTCTGGGGAAATAAGTGCAGTATTCGGC +
Preference number: 3 (lower is better)
Translates to: KEPPLSELPDAF*RFSGEISAVFG
Trigger: GCCGAATACTGCACTTATTTCCCCAGAGAATCTGCAGAAAGCATCTGGCAGTTCAGACAAAGGGGGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CAA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTGGCCCTGGATGGCATaGAGGGGGCAGGAAGCAAGC +
Preference number: 3 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHWPWMA*RGQEAS
Trigger: GCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGCCA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp TTTGCTCACCATTTGAACTGGTTTAACTTCTCGCTCTaGAGTTCATACAGTAAACCTGCGCTGAGCAGACGC +
Preference number: 3 (lower is better)
Translates to: FAHHLNWFNFSL*SSYSKPALSRR
Trigger: GCGTCTGCTCAGCGCAGGTTTACTGTATGAACTTCAGAGCGAGAAGTTAAACCAGTTCAAATGGTGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CAA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTCTAGACAATACAGAATaGACTGACAGTCAGGACAGC +
Preference number: 3 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSLDNTE*TDSQDS
Trigger: GCTGTCCTGACTGTCAGTCAATTCTGTATTGTCTAG...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CAA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACGGAGTTAAGTTTGGGTaGAAGTGTGGACACTTTCAC +
Preference number: 3 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDGVKFG*KCGHFH
Trigger: GTGAAAGTGTCCACACTTCAACCCAAACTTAACTCC...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CAA 90 bp GATGCTTTCTGCAGATTCTCTGGGGAAATAAGTGCAGTATTCGGCCTAGAGGCTGTTTGTCTTTATTGCTaGAACCATCAGGGAGTTATG +
Preference number: 3 (lower is better)
Translates to: DAFCRFSGEISAVFGLEAVCLYC*NHQGVM
Trigger: CATAACTCCCTGATGGTTCAAGCAATAAAGACAAAC...AGCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAGAATCTGCAGAAAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CAA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTACTAGACAATACAGAATaGACTGACAGTCAGGACAGC +
Preference number: 3 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVLDNTE*TDSQDS
Trigger: GCTGTCCTGACTGTCAGTCAATTCTGTATTGTCTAG...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp GCAGTATTCGGCCTAGAGGCTTCTTCAGTCAGGAGTTaGATAATCAAAGCTTCCACATCAAAGAAAAGCACA +
Preference number: 3 (lower is better)
Translates to: AVFGLEASSVRS*IIKASTSKKST
Trigger: TGTGCTTTTCTTTGATGTGGAAGCTTTGATTATTCAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CAA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTACACTGTACAGTTCTaGGTTTCTTTCTTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDYTVQF*VSFLEA
Trigger: AGCTTCCAAGAAAGAAACCAAGAACTGTACAGTGTA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR GCA 72 bp GTCATGGCTAAATCCTCAGAAATGGAACTGAGTAACTaGCTATCAATTGCTAGCAGGAAGAGAAAGCAATGT +
Preference number: 3 (lower is better)
Translates to: VMAKSSEMELSN*LSIASRKRKQC
Trigger: ACATTGCTTTCTCTTCCTGCTAGCAATTGATAGGCAGTTACTCAGTTCCATTTCTGAGGATTTAGCCATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR-3UTR CAA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACACCTAAACTTGGTTCTTaGTTGAAAGTCCCCTTAGAA +
Preference number: 3 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTPKLGS*LKVPLE
Trigger: TTCTAAGGGGACTTTCAACAAAGAACCAAGTTTAGG...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp CAATGTGTCTACACAGTTAGGAGACTTCTAGGATGCTaGCTTAAATGCTTTCCTAGTTGTTCTTTCACTGGT +
Preference number: 3 (lower is better)
Translates to: QCVYTVRRLLGC*LKCFPSCSFTG
Trigger: ACCAGTGAAAGAACAACTAGGAAAGCATTTAAGTCAGCATCCTAGAAGTCTCCTAACTGTGTAGACACATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR TCA 72 bp TGGATATCCGGGTCTGTTAGGTTTGTCTTTATTGCTTaGACCATCAGGGAGTTATGGGAATATTTAGGTAAA +
Preference number: 3 (lower is better)
Translates to: WISGSVRFVFIA*TIRELWEYLGK
Trigger: TTTACCTAAATATTCCCATAACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAACAGACCCGGATATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAACCTAAACTTGGTTCTTaGTTGAAAGTCCCCTTAGAA +
Preference number: 3 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKPKLGS*LKVPLE
Trigger: TTCTAAGGGGACTTTCAACAAAGAACCAAGTTTAGG...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGCGGGCAGAGTCAGCTaGAGGGCTCAGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWAGRVS*RAQRQP
Trigger: GGGCTGCCTCTGAGCCCTGCAGCTGACTCTGCCCGC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGGCCTACGCCCTCCGCTaGTGGCAGCTTCCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKAYALR*WQLPSY
Trigger: GTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGC...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGGGACCTGGTAGGTCTTaGTGCAGCGCAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKGPGRS*CSAAEE
Trigger: CTCCTCAGCTGCGCTGCATCAAGACCTACCAGGTCC...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGGCAGCTGCCATAGTCTaGATGGCTTCCGCCGTGACG +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKAAAIV*MASAVT
Trigger: CGTCACGGCGGAAGCCATGCAGACTATGGCAGCTGC...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGATACTCTGCTGGGACTaGGTGTTCGCTGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKILCWD*VFAARA
Trigger: GGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTAT...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGTTGTTTCTCAGCGTCTaGACAGAGCTCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKLFLSV*TELQQP
Trigger: GGGCTGCTGGAGCTCTGTGCAGACGCTGAGAAACAA...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGGTGGGAGCCAGGGGATaGTGGCTGCACTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWVGARG*WLHWRD
Trigger: GTCCCTCCAGTGCAGCCAGCATCCCCTGGCTCCCAC...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp CCTGCCTGCTCAATCCTTCTCAGCTCAGCTAGAAGCAGGGCCTGTGCAGCCTCTCACGTCGCTGCGGAATaGATCACTAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PACSILLSSARSRACAASHVAAE*ITSWKA
Trigger: TGCCTTCCAGCTAGTGATTCATTCCGCAGCGACGTG...AGAGGCTGCACAGGCCCTGCTTCTAGCTGAGCTGAGAAGGATTGAGCAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCCAGGAGAGGAGGCCTaGATCTCTCCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRPGEEA*ISPAPA
Trigger: TGCTGGGGCTGGAGAGATTCAGGCCTCCTCTCCTGG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGACACAGAGCCGTCTGTaGATCCCACCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWTQSRL*IPPPGS
Trigger: ACTACCTGGTGGTGGGATGCACAGACGGCTCTGTGT...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGCACCAGTGTCCATCTaGCAGACATACACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWAPVSI*QTYTEP
Trigger: CGGCTCTGTGTATGTCTGGCAGATGGACACTGGTGC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGAAGGACACCGTGCAGTaGGGTTTCAGCATTCCGAGG +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWKDTVQ*GFSIPR
Trigger: CCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTT...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGGCATCTGGAGCAGCTaGCATAGTCTGCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWGIWSS*HSLHGF
Trigger: GAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGTGGCAGTTCTCCGGATaGTGCTATGAGGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWWQFSG*CYEEGA
Trigger: AGCTCCCTCCTCATAGCACCATCCGGAGAACTGCCA...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGGGTGATGAAGGCGGGTaGTCTGGCTGTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREGDEGG*SGCGDE
Trigger: CTCATCGCCACAGCCAGACCACCCGCCTTCATCACC...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GCACAACGATCCAGCGCACCAGTGTCCATCTGCCAGACATACACAGAGCCGTCTTCCTCTTGTGTCCGCTaGGAGCGGATGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: AQRSSAPVSICQTYTEPSSSCVR*ERMMLM
Trigger: CATGAGCATCATCCGCTCTCAGCGGACACAAGAGGA...AGACGGCTCTGTGTATGTCTGGCAGATGGACACTGGTGCGCTGGATCGTTGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGACCAAAGGACACCGTaGAGTGCGGTTTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWDQRTP*SAVSAF
Trigger: GAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGGGACTGGGTGTTCGCTaGAAGGGCCGTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWGLGVR*KGRVSV
Trigger: CACAGACACACGGCCCTTGCAGCGAACACCCAGTCC...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGACAACACCTCAAGGCTaGTGGCATCCACAACGAGGA +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWTTPQG*WHPQRG
Trigger: TCCTCGTTGTGGATGCCACCAGCCTTGAGGTGTTGT...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGTGGGCCCGAGGCATCTaGAGCAGCTGCCATAGTCTG +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWWARGI*SSCHSL
Trigger: CAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCA...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGTGTGTATACTCTGCTaGGACTGGGTGTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWVCILC*DWVFAA
Trigger: TGCAGCGAACACCCAGTCCCAGCAGAGTATACACAC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGCACGTCGCTGCGGAATaGATCACTAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREHVAAE*ITSWKA
Trigger: TGCCTTCCAGCTAGTGATTCATTCCGCAGCGACGTG...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGGTATCTCCACTGCTGTaGTTCCCATTGCACAACGAT +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKVSPLL*FPLHND
Trigger: ATCGTTGTGCAATGGGAATCACAGCAGTGGAGATAC...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGGGCCCTTCTTCATGTaGTCGCCAATGAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWGPFFM*SPMKVA
Trigger: TGCAACTTTCATTGGCGATCACATGAAGAAGGGCCC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCTCCGGATGGTGCTATaGGGAGGGAGCTTGGGACTT +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRLRMVL*GGSLGL
Trigger: AAGTCCCAAGCTCCCTCCTCATAGCACCATCCGGAG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGCGGGCAGAGTCAGCTaGAGGGCTCAGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRAGRVS*RAQRQP
Trigger: GGGCTGCCTCTGAGCCCTGCAGCTGACTCTGCCCGC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGAGCCTGCCCTCTTGCTaGTTCCCAACAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRESLPSC*FPTENW
Trigger: CCAGTTCTCTGTTGGGAACCAGCAAGAGGGCAGGCT...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CGGTCCTGCCATCTTCGAGCTAGCATCTCCAGGAGAGGAGGCCTGAATCTCTCCACACCTCAAGGCTGGTaGCATCCACAACGAGGATTT +
Preference number: 4 (lower is better)
Translates to: RSCHLRASISRRGGLNLSTPQGW*HPQRGF
Trigger: AAATCCTCGTTGTGGATGCCACCAGCCTTGAGGTGT...GGAGAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCTCGAAGATGGCAGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGGTAGGGTCAGTGGCTTaGACTTGCTGGCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWVGSVA*TCWPGT
Trigger: AGTACCGGGCCAGCAAGTCCAAGCCACTGACCCTAC...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCCTTGCACGTGTGTCTaGCCAGGGAGTAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRPCTCV*PGSSWS
Trigger: GCTCCAACTACTCCCTGGCCAGACACACGTGCAAGG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGGAACCTGCAGATAGCTaGAAAACACTCCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKEPADS*KTLLKT
Trigger: GGTCTTCAGGAGTGTTTTCCAGCTATCTGCAGGTTC...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGCTTTTGACAAACAAGTaGTGGATGCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKLLTNK*WMLCGQ
Trigger: TTGGCCACACAGCATCCATCACTTGTTTGTCAAAAG...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GACTTTGGCTTCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTGCATGGCCTTTTGACAAACAAGTaGTGGATGCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DFGFWARGIWSSCHSLHGLLTNK*WMLCGQ
Trigger: TTGGCCACACAGCATCCATCACTTGTTTGTCAAAAG...GCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGAAGCCAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGTCCTCTTGTGTCCGCTaGGAGCGGATGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWSSCVR*ERMMLM
Trigger: CATGAGCATCATCCGCTCTCAGCGGACACAAGAGGA...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGCACGTCGCTGCGGAATaGATCACTAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWHVAAE*ITSWKA
Trigger: TGCCTTCCAGCTAGTGATTCATTCCGCAGCGACGTG...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AGAACCGCTGCTCGCTTCCCAGTTAGGAAAGAGCCCCCTTTGTCTGAACTGCCATCTCCTTGCAATAGCTaGACTATGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RTAARFPVRKEPPLSELPSPCNS*TMAVWV
Trigger: CACCCAGACGGCCATAGTTCAGCTATTGCAAGGAGA...TGGCAGTTCAGACAAAGGGGGCTCTTTCCTAACTGGGAAGCGAGCAGCGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGTATCTCCACTGCTGTaGTTCCCATTGCACAACGAT +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWVSPLL*FPLHND
Trigger: ATCGTTGTGCAATGGGAATCACAGCAGTGGAGATAC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGAAGCCTTCAGGGATTTaGCTGGAGCTTCGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRKPSGI*LELRGL
Trigger: CAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTT...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CATCGGTCCTGCCATCTTCGAGCTAGCATCTCCAGGAGAGGAGGCCTGAATCTCAATGTGTGGGTGCTTTaGGGCCCCAAAGAACAATGG +
Preference number: 4 (lower is better)
Translates to: HRSCHLRASISRRGGLNLNVWVL*GPKEQW
Trigger: CCATTGTTCTTTGGGGCCGCAAAGCACCCACACATT...GAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCTCGAAGATGGCAGGACCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp TCCAGCGCACCAGTGTCCATCTGCCAGACATACACAGAGCCGTCTGTGCATCCCGATGATGACTTTGTCTaGAGACACAAAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSAPVSICQTYTEPSVHPDDDFV*RHKVPS
Trigger: GGAGGGGACTTTGTGTCTGCAGACAAAGTCATCATC...GGGATGCACAGACGGCTCTGTGTATGTCTGGCAGATGGACACTGGTGCGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGCTTCCTTCCTACTTCTaGTTTCGCATGCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKLPSYF*FRMQQF
Trigger: AAACTGCTGCATGCGAAAGCAGAAGTAGGAAGGAAG...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCGTCTCCTTCCGTCCTaGCTGCTCAATCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRRLLPS*LLNPSQ
Trigger: CTGAGAAGGATTGAGCAGGCAGGACGGAAGGAGACG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGGGCATCTGGAGCAGCTaGCATAGTCTGCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRGIWSS*HSLHGF
Trigger: GAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCC...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGTCATCCACCAGGTCATaGTCTTCTTCCTGGACTTTG +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWSSTRS*SSSWTL
Trigger: CAAAGTCCAGGAAGAAGAGCATGACCTGGTGGATGA...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGAGGAGGCCTACAGAGTaGTCACTGGCTACGGAACAG +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRRRPTE*SLATEQ
Trigger: CTGTTCCGTAGCCAGTGACCACTCTGTAGGCCTCCT...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGAATGTTACTGGAGGGTaGAGGGGAATCCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRENVTGG*RGIPRL
Trigger: AAGGCGAGGGATTCCCCTCCACCCTCCAGTAACATT...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGGTGTGTATACTCTGCTaGGACTGGGTGTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREVCILC*DWVFAA
Trigger: TGCAGCGAACACCCAGTCCCAGCAGAGTATACACAC...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGAACCTGCAGATAGCTaGAAAACACTCCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWEPADS*KTLLKT
Trigger: GGTCTTCAGGAGTGTTTTCCAGCTATCTGCAGGTTC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CAA 72 bp GTAAGGTTGTATTCTAGTAGGGTCAGTGGCTTGGACTaGCTGGCCCGGTACTCAGGGTCACTATCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VRLYSSRVSGLD*LARYSGSLSSL
Trigger: CAGGGAGGATAGTGACCCTGAGTACCGGGCCAGCAAGTCCAAGCCACTGACCCTACTAGAATACAACCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp GCACAACGATCCAGCGCACCAGTGTCCATCTGCCAGACATACACAGAGCCGTCTGGAATCACACTTAGCTaGTCGATAATTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AQRSSAPVSICQTYTEPSGITLS*SIIPAG
Trigger: CCCTGCTGGAATTATCGATCAGCTAAGTGTGATTCC...AGACGGCTCTGTGTATGTCTGGCAGATGGACACTGGTGCGCTGGATCGTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGCTCCACTTGATCACCTaGATAGGAAAGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRELHLIT*IGKRWR
Trigger: TCGCCACCTCTTTCCTATTCAGGTGATCAAGTGGAG...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GATGCTTTCTGCAGATTCTCTGGGGAAATAAGTGCAGTATTCGGCCTAGAGGCTTGCCGAGCTGAGACCTaGTGGGGATACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: DAFCRFSGEISAVFGLEACRAET*WGYSRH
Trigger: GTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGCA...AGCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAGAATCTGCAGAAAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGATTGGCTCAGTATCCTaGATTCCACTCATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKIGSVS*IPLISE
Trigger: CTCTGAAATGAGTGGAATGCAGGATACTGAGCCAAT...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GGAGGGTGGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGTGCCAGGTCTAGGTTGTCAAATGCCTCTTaGAAGCTAATACAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GGWRGIPRLREVWGARSRLSNAS*KLIQVV
Trigger: GACAACTTGTATTAGCTTGCAAGAGGCATTTGACAA...CCTAGACCTGGCACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGCTGCCAGATGCTTTCTaGAGATTCTCTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWLPDAF*RFSGEI
Trigger: TATTTCCCCAGAGAATCTGCAGAAAGCATCTGGCAG...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGGACCAAAGGACACCGTaGAGTGCGGTTTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWDQRTP*SAVSAF
Trigger: GAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTC...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTTCAGTATCTCCACTGCTGTGATTCCCATTGCACAACGATCCAGCGCACCAGTAGCCTGCCCTCTTGCTaGTTCCCAACAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: VQYLHCCDSHCTTIQRTSSLPSC*FPTENW
Trigger: CCAGTTCTCTGTTGGGAACCAGCAAGAGGGCAGGCT...ACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGAGGTTCGTTGCTGTTaGGAATCACACTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWEVRCC*ESHLAD
Trigger: ATCAGCTAAGTGTGATTCCCAACAGCAACGAACCTC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGATATCAGGTATCTTTaGTCATACCGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWDIRYL*SYRAET
Trigger: GGTCTCAGCTCGGTATGACCAAAGATACCTGATATC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAGTAGGGTCAGTGGCTTaGACTTGCTGGCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVEVGSVA*TCWPGT
Trigger: AGTACCGGGCCAGCAAGTCCAAGCCACTGACCCTAC...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGAATGTTACTGGAGGGTaGAGGGGAATCCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWNVTGG*RGIPRL
Trigger: AAGGCGAGGGATTCCCCTCCACCCTCCAGTAACATT...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCTTGCACAATGTTACTaGAGGGTGGAGGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRLAQCY*RVEGNP
Trigger: GGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGCTTCAGGGATTTGACTaGAGCTTCGAGGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWLQGFD*SFEAWS
Trigger: TGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAG...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CAA 72 bp ACCGCTGCTCGCTTCCCAGTTAGGAAAGAGCCCCCTTaGTCTGAACTGCCAGATGCTTTCTGCAGATTCTCT +
Preference number: 4 (lower is better)
Translates to: TAARFPVRKEPP*SELPDAFCRFS
Trigger: AGAGAATCTGCAGAAAGCATCTGGCAGTTCAGACAAAGGGGGCTCTTTCCTAACTGGGAAGCGAGCAGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCATCTGTGGGACACTTaGCAAGCAACCTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRHLWDT*QATCSD
Trigger: ATCACTGCAGGTTGCTTGTCAAGTGTCCCACAGATG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGTGCGCTCATAATAGCTaGCCATGTAGAACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRECAHNS*PCRTCR
Trigger: TCTGCAGGTTCTACATGGTCAGCTATTATGAGCGCA...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGAATGTGTGGGTGCTTTaGGGCCCCAAAGAACAATGG +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRNVWVL*GPKEQW
Trigger: CCATTGTTCTTTGGGGCCGCAAAGCACCCACACATT...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGAATGCAATGTGTGGGTaGTTTGCGGCCCCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWNAMCG*FAAPKN
Trigger: GTTCTTTGGGGCCGCAAAGCACCCACACATTGCATT...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGATCCAGTTACAATTGTaGCCCCATCATCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWIQLQL*PHHLST
Trigger: TGTTGACAGATGATGGGGGCACAATTGTAACTGGAT...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGACTGGTAGAACTGTATaGCAGTGTGTGTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRETGRTV*QCVCRL
Trigger: TAGCCTGCACACACACTGGCATACAGTTCTACCAGT...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CTCGATAGGAGACCAAAGGACACCGTGCAGTGCGGTTTCAGCATTCCGAGGCGATCCAAGAGGCTATGCTaGACAGGAGGGATCAAATTT +
Preference number: 4 (lower is better)
Translates to: LDRRPKDTVQCGFSIPRRSKRLC*TGGIKF
Trigger: AAATTTGATCCCTCCTGTGCAGCATAGCCTCTTGGA...TCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTCTCCTATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGGTCACTATCCTCCCTaGTCTGCCTCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRGHYPP*SASSPP
Trigger: AGGAGGCGAGGAGGCAGAGCAGGGAGGATAGTGACC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACGCCTACGCCCTCCGCTaGTGGCAGCTTCCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDAYALR*WQLPSY
Trigger: GTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGC...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGGGCCCCAAAGAACAATaGGCAGAACTAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRGPKEQ*AELGCF
Trigger: GAAACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCC...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AGGACACCGTGCAGTGCGGTTTCAGCATTCCGAGGCGATCGAGACAAACTTCATGTGATGGATGCTGTGTaGCCAAATAACAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RTPCSAVSAFRGDRDKLHVMDAV*PNNSAR
Trigger: CCGAGCACTGTTATTTGGCCACACAGCATCCATCAC...ATGAAGTTTGTCTCGATCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAAGGAGGCCTACAGAGTaGTCACTGGCTACGGAACAG +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVERRPTE*SLATEQ
Trigger: CTGTTCCGTAGCCAGTGACCACTCTGTAGGCCTCCT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGGTGATGAAGGCGGGTaGTCTGGCTGTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRGDEGG*SGCGDE
Trigger: CTCATCGCCACAGCCAGACCACCCGCCTTCATCACC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAAGGGCTACTGAGCCATaGCGTGCTCCAACTGCGATT +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVERATEP*RAPTAI
Trigger: AATCGCAGTTGGAGCACGCCATGGCTCAGTAGCCCT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGAGAAGCGCAGGCTTTTaGCAAACAAGTGATGGATGC +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWRSAGF*QTSDGC
Trigger: GCATCCATCACTTGTTTGTCAAAAGCCTGCGCTTCT...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAATTGGTCATACCGAGCTaGGACCTGATGGGGATACAG +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVELVIPS*DLMGIQ
Trigger: CTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAA...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGTCTTCAGTCAGGAGTTaGATAATCAAAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWSSVRS*IIKAST
Trigger: TGTGGAAGCTTTGATTATTCAACTCCTGACTGAAGA...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGAGTCAGAGCCAGAGTaGTCAGCGTCAGACCGAGCA +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRESEPE*SASDRA
Trigger: TGCTCGGTCTGACGCTGATCACTCTGGCTCTGACTC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072726.7
CDS-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGCTCCGGATGGTGCTATaGGGAGGGAGCTTGGGACTT +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRLRMVL*GGSLGL
Trigger: AAGTCCCAAGCTCCCTCCTCATAGCACCATCCGGAG...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGTGCGCTCATAATAGCTaGCCATGTAGAACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWCAHNS*PCRTCR
Trigger: TCTGCAGGTTCTACATGGTCAGCTATTATGAGCGCA...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CCATATACTGAGGTAAGTAAGGAGCCCAGGTGTCGATCGTCTCCTTCCGTCCTGACTGGTAGAACTGTATaGCAGTGTGTGTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PYTEVSKEPRCRSSPSVLTGRTV*QCVCRL
Trigger: TAGCCTGCACACACACTGGCATACAGTTCTACCAGT...CAGGACGGAAGGAGACGATCGACACCTGGGCTCCTTACTTACCTCAGTATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGCTGCCAGATGCTTTCTaGAGATTCTCTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRELPDAF*RFSGEI
Trigger: TATTTCCCCAGAGAATCTGCAGAAAGCATCTGGCAG...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGCTTCCTTCCTACTTCTaGTTTCGCATGCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRELPSYF*FRMQQF
Trigger: AAACTGCTGCATGCGAAAGCAGAAGTAGGAAGGAAG...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAGGCAACATAACACAGTaGATGGCGGCTAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVEGNITQ*MAANWL
Trigger: GAGCCAGTTAGCCGCCATGCACTGTGTTATGTTGCC...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACGGACTGGGTGTTCGCTaGAAGGGCCGTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDGLGVR*KGRVSV
Trigger: CACAGACACACGGCCCTTGCAGCGAACACCCAGTCC...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGAGTTCAGCATTCCAATaGTTCCCAGGAGTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRSSAFQ*FPGVRC
Trigger: ACACCTCACTCCTGGGAAGCATTGGAATGCTGAACT...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CCTCAGAAGCCAAAAGGTTCGTTGCAAGGGTTTGCAGCTTATGGTGGGCCATATACAACACCTCAAGGCTaGTGGCATCCACAACGAGGA +
Preference number: 4 (lower is better)
Translates to: PQKPKGSLQGFAAYGGPYTTPQG*WHPQRG
Trigger: TCCTCGTTGTGGATGCCACCAGCCTTGAGGTGTTGT...ATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CAA 72 bp AGAGGCCTCAGAAGCCAAAAGGTTCGTTGCAAGGGTTaGCAGCTTATGGTGGGCCATATTTTTAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGLRSQKVRCKG*QLMVGHIFKGG
Trigger: GCCGCCCTTAAAAATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTCTGAGGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CAA 72 bp TCCATAGTAAGGTTGTATTCTAGTAGGGTCAGTGGCTaGGACTTGCTGGCCCGGTACTCAGGGTCACTATCC +
Preference number: 4 (lower is better)
Translates to: SIVRLYSSRVSG*DLLARYSGSLS
Trigger: GGATAGTGACCCTGAGTACCGGGCCAGCAAGTCCAAGCCACTGACCCTACTAGAATACAACCTTACTATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGTCCTCTTGTGTCCGCTaGGAGCGGATGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRSSCVR*ERMMLM
Trigger: CATGAGCATCATCCGCTCTCAGCGGACACAAGAGGA...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AAAGAACCGCTGCTCGCTTCCCAGTTAGGAAAGAGCCCCCTTTGTCTGAACTGCATTTTCACTAGGACCTaGGCACAACAGAGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: KEPLLASQLGKSPLCLNCIFTRT*AQQRVV
Trigger: GACTACTCTCTGTTGTGCTCAGGTCCTAGTGAAAAT...GCAGTTCAGACAAAGGGGGCTCTTTCCTAACTGGGAAGCGAGCAGCGGTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGGTGATCTCACCACCATaGACACAGAAGATATGTTTC +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREVISPP*TQKICF
Trigger: GAAACATATCTTCTGTGTTCATGGTGGTGAGATCAC...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGGAACAGATGCAGTGTTaGACTCTTGCACTACAGTTT +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREEQMQC*TLALQF
Trigger: AAACTGTAGTGCAAGAGTTCAACACTGCATCTGTTC...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCGTGGAGACAGGACATaGATAATTTTGCGGTATCCA +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRRGDRT*IILRYP
Trigger: TGGATACCGCAAAATTATTCATGTCCTGTCTCCACG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAGGGCCCTTCTTCATGTaGTCGCCAATGAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVEGPFFM*SPMKVA
Trigger: TGCAACTTTCATTGGCGATCACATGAAGAAGGGCCC...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAAATGTGTGGGTGCTTTaGGGCCCCAAAGAACAATGG +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVENVWVL*GPKEQW
Trigger: CCATTGTTCTTTGGGGCCGCAAAGCACCCACACATT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAACTCTGGGGAAATAAGTaGAGTATTCGGCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVELWGNK*SIRPRG
Trigger: GCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAG...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TTGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTGGAGGGGAATCCCTCGCGGCCCCAAAGAACAATaGGCAGAACTAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LFNLSLHNVTGGWRGIPRGPKEQ*AELGCF
Trigger: GAAACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCC...GCGAGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAGTGATGGATGCTGTGTaGCCAAATAACAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVEVMDAV*PNNSAR
Trigger: CCGAGCACTGTTATTTGGCCACACAGCATCCATCAC...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAACACCTCAAGGCTGGTaGCATCCACAACGAGGATTT +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVETPQGW*HPQRGF
Trigger: AAATCCTCGTTGTGGATGCCACCAGCCTTGAGGTGT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CAAGCGTTCAGTATCTCCACTGCTGTGATTCCCATTGCACAACGATCCAGCGCAGGAGCTGATCCAGTCTaGAGAGATCTTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: QAFSISTAVIPIAQRSSAGADPV*RDLRYQ
Trigger: TTGGTATCGAAGATCTCTCCAGACTGGATCAGCTCC...TGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGTTTCAGGTTGACTGCTaGATGACTAAGAGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREFQVDC*MTKRVY
Trigger: GTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAA...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGTGGGCCCGAGGCATCTaGAGCAGCTGCCATAGTCTG +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLWARGI*SSCHSL
Trigger: CAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCA...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGCTGGACTTTGGCTTCTaGGCCCGAGGCATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLLDFGF*ARGIWS
Trigger: GCTCCAGATGCCTCGGGCCCAGAAGCCAAAGTCCAG...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTATACTCTGCTGGGACTaGGTGTTCGCTGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSILCWD*VFAARA
Trigger: GGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTAT...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACAACTTAAGGGCGTTGTaGGAGCCAGGGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDNLRAL*EPGDAG
Trigger: GCCAGCATCCCCTGGCTCCCACAACGCCCTTAAGTT...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTATACCGAGCTGAGACCTaGTGGGGATACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVYRAET*WGYSRH
Trigger: GTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTA...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGTTTGTCTTTATTGCTTaGACCATCAGGGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREFVFIA*TIRELW
Trigger: CCATAACTCCCTGATGGTTCAAGCAATAAAGACAAA...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACGCGCAGCTGAGGAGCTaGGTTCAGCATTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDAQLRS*VQHSNA
Trigger: AGCATTGGAATGCTGAACTCAGCTCCTCAGCTGCGC...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAGGACCTGGTAGGTCTTaGTGCAGCGCAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTGPGRS*CSAAEE
Trigger: CTCCTCAGCTGCGCTGCATCAAGACCTACCAGGTCC...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGACAGTATTGACGAAATaGAATGTGTGGGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRTVLTK*NVWVLC
Trigger: GCAAAGCACCCACACATTGCATTTCGTCAATACTGT...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CCATATACTGAGGTAAGTAAGGAGCCCAGGTGTCGATCGTCTCCTTCCGTCCTGATCCAGTTACAATTGTaGCCCCATCATCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: PYTEVSKEPRCRSSPSVLIQLQL*PHHLST
Trigger: TGTTGACAGATGATGGGGGCACAATTGTAACTGGAT...CAGGACGGAAGGAGACGATCGACACCTGGGCTCCTTACTTACCTCAGTATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTACACAGAGCCGTCTGTaGATCCCACCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSTQSRL*IPPPGS
Trigger: ACTACCTGGTGGTGGGATGCACAGACGGCTCTGTGT...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGATAGTTTCTTTCACTTaGTGGAAAAGAACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREIVSFT*WKRTAA
Trigger: AGCAGCGGTTCTTTTCCAGCAAGTGAAAGAAACTAT...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACAAGGACACCGTGCAGTaGGGTTTCAGCATTCCGAGG +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDKDTVQ*GFSIPR
Trigger: CCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTT...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGGCAACATAACACAGTaGATGGCGGCTAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRGNITQ*MAANWL
Trigger: GAGCCAGTTAGCCGCCATGCACTGTGTTATGTTGCC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGTGGTGTGTATACTCTaGTGGGACTGGGTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRVVCIL*WDWVFA
Trigger: AGCGAACACCCAGTCCCAGCAGAGTATACACACCAC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAAGTGAGGTGTTCATCTaGCAGAAGGAAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVESEVFI*QKEMWL
Trigger: CAGCCACATTTCCTTCTGGCAGATGAACACCTCACT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAAGTTCAGCATTCCAATaGTTCCCAGGAGTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVESSAFQ*FPGVRC
Trigger: ACACCTCACTCCTGGGAAGCATTGGAATGCTGAACT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGCATATTTGTCCATCGTaGCATCCAGTTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREHICPS*HPVTIV
Trigger: CACAATTGTAACTGGATGCCACGATGGACAAATATG...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CAAGCGTTCAGTATCTCCACTGCTGTGATTCCCATTGCACAACGATCCAGCGCAGAGGTTCGTTGCTGTTaGGAATCACACTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QAFSISTAVIPIAQRSSAEVRCC*ESHLAD
Trigger: ATCAGCTAAGTGTGATTCCCAACAGCAACGAACCTC...TGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGCTTGCACAATGTTACTaGAGGGTGGAGGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRLAQCY*RVEGNP
Trigger: GGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAG...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGCCTTGCACGTGTGTCTaGCCAGGGAGTAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLPCTCV*PGSSWS
Trigger: GCTCCAACTACTCCCTGGCCAGACACACGTGCAAGG...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTAAACTTAAGGGCGTTGTaGGAGCCAGGGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVNLRAL*EPGDAG
Trigger: GCCAGCATCCCCTGGCTCCCACAACGCCCTTAAGTT...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CAA 72 bp ATTTTTAAGGGCGGCGAGACTCCGTCTTGTCATGGCTaGTTTCAGGTTGACTGCTGGATGACTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: IFKGGETPSCHG*FQVDCWMTKRV
Trigger: GACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAAGCCATGACAAGACGGAGTCTCGCCGCCCTTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGTCCTCTTGTGTCCGCTaGGAGCGGATGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLRESSCVR*ERMMLM
Trigger: CATGAGCATCATCCGCTCTCAGCGGACACAAGAGGA...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGCACGTCGCTGCGGAATaGATCACTAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREHVAAE*ITSWKA
Trigger: TGCCTTCCAGCTAGTGATTCATTCCGCAGCGACGTG...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTCTCCTTGCAATAGCTaGACTATGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDSPCNS*TMAVWV
Trigger: CACCCAGACGGCCATAGTTCAGCTATTGCAAGGAGA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTTCTCCTTGCAATAGCTaGACTATGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSSPCNS*TMAVWV
Trigger: CACCCAGACGGCCATAGTTCAGCTATTGCAAGGAGA...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTTGGTCATACCGAGCTaGGACCTGATGGGGATACAG +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDLVIPS*DLMGIQ
Trigger: CTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAACCAGGAGAGGAGGCCTaGATCTCTCCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKPGEEA*ISPAPA
Trigger: TGCTGGGGCTGGAGAGATTCAGGCCTCCTCTCCTGG...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGAATGCTTCCCAGGAGTaGGGTGTTCATCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRNASQE*GVHLPE
Trigger: TTCTGGCAGATGAACACCTCACTCCTGGGAAGCATT...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CAAGCGTTCAGTATCTCCACTGCTGTGATTCCCATTGCACAACGATCCAGCGCAACAGTATTGACGAAATaGAATGTGTGGGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QAFSISTAVIPIAQRSSATVLTK*NVWVLC
Trigger: GCAAAGCACCCACACATTGCATTTCGTCAATACTGT...TGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAACGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp TGCAGTGCGGTTTCAGCATTCCGAGGCGATCGAGACAAACTTCATCCAGAACTTGGCTTCCTGTTTCTCTaGTATGTCTGCTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: CSAVSAFRGDRDKLHPELGFLFL*YVCYVP
Trigger: TGGAACATAGCAGACATAGCAGAGAAACAGGAAGCC...AAGTTCTGGATGAAGTTTGTCTCGATCGCCTCGGAATGCTGAAACCGCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGTTGTCAAATGCCTCTTaGAAGCTAATACAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRELSNAS*KLIQVV
Trigger: GACAACTTGTATTAGCTTGCAAGAGGCATTTGACAA...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTGCTGTGATTCCCATTaGACAACGATCCAGCGCACC +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDCCDSH*TTIQRT
Trigger: GGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGCGTCTCCTTCCGTCCTaGCTGCTCAATCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLRLLPS*LLNPSQ
Trigger: CTGAGAAGGATTGAGCAGGCAGGACGGAAGGAGACG...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGACGAAATGCAATGTGTaGGTGCTTTGCGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRTKCNV*VLCGPK
Trigger: TTTGGGGCCGCAAAGCACCCACACATTGCATTTCGT...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGCATATTTGTCCATCGTaGCATCCAGTTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRHICPS*HPVTIV
Trigger: CACAATTGTAACTGGATGCCACGATGGACAAATATG...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGAGCCTGCCCTCTTGCTaGTTCCCAACAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLRESLPSC*FPTENW
Trigger: CCAGTTCTCTGTTGGGAACCAGCAAGAGGGCAGGCT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGAGCCTGCCCTCTTGCTaGTTCCCAACAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLSLPSC*FPTENW
Trigger: CCAGTTCTCTGTTGGGAACCAGCAAGAGGGCAGGCT...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAACGCCTTAGAGAGGTCTaGGGTGCCAGGTCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKRLREV*GARSRR
Trigger: CCGCCTAGACCTGGCACCCCAGACCTCTCTAAGGCG...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACCTTCAGGGATTTGACTaGAGCTTCGAGGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDLQGFD*SFEAWS
Trigger: TGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAG...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAATGTTCCTTCCCATCATaGGCCATGAGGATAACATTC +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVECSFPS*AMRITF
Trigger: GAATGTTATCCTCATGGCCCATGATGGGAAGGAACA...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAAAAGTGACCTCTGTGTaGATGCACAAAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVEKVTSV*MHKKRC
Trigger: GCATCTCTTTTTGTGCATTCACACAGAGGTCACTTT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TTGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTGGAGGGGAATCCCTCGCAAAGTGACCTCTGTGTaGATGCACAAAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: LFNLSLHNVTGGWRGIPRKVTSV*MHKKRC
Trigger: GCATCTCTTTTTGTGCATTCACACAGAGGTCACTTT...GCGAGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp CCTCAGAAGCCAAAAGGTTCGTTGCAAGGGTTTGCAGCTTATGGTGGGCCATATAACTCTTTATCTTTCTaGTCCAAGAGGCTATGCTGC +
Preference number: 4 (lower is better)
Translates to: PQKPKGSLQGFAAYGGPYNSLSF*SKRLCC
Trigger: GCAGCATAGCCTCTTGGATCAGAAAGATAAAGAGTT...ATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGGGAATCACACTTAGCTaGTCGATAATTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRGITLS*SIIPAG
Trigger: CCCTGCTGGAATTATCGATCAGCTAAGTGTGATTCC...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGTACCGAGCTGAGACCTaGTGGGGATACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLYRAET*WGYSRH
Trigger: GTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTA...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGTTGGTCATACCGAGCTaGGACCTGATGGGGATACAG +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLRELVIPS*DLMGIQ
Trigger: CTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAA...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTCTCCACTTGATCACCTaGATAGGAAAGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSLHLIT*IGKRWR
Trigger: TCGCCACCTCTTTCCTATTCAGGTGATCAAGTGGAG...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGTATTCGCCAGGGATATaGTGGACAACAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRYSPGI*WTTDAE
Trigger: CTCAGCATCTGTTGTCCATCATATCCCTGGCGAATA...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGACTGGTAGAACTGTATaGCAGTGTGTGTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRTGRTV*QCVCRL
Trigger: TAGCCTGCACACACACTGGCATACAGTTCTACCAGT...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAAATTGGCTCAGTATCCTaGATTCCACTCATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVEIGSVS*IPLISE
Trigger: CTCTGAAATGAGTGGAATGCAGGATACTGAGCCAAT...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CCTGATTATAACCGGGAAGCATCAGCGACATATGACCTCCTCTCGATAGGAGACATTGGCTCAGTATCCTaGATTCCACTCATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PDYNREASATYDLLSIGDIGSVS*IPLISE
Trigger: CTCTGAAATGAGTGGAATGCAGGATACTGAGCCAAT...GTCTCCTATCGAGAGGAGGTCATATGTCGCTGATGCTTCCCGGTTATAATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR GCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTGCAGTGTTGAACTCTTaGACTACAGTTTTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSAVLNS*TTVFRG
Trigger: CCCCCGGAAAACTGTAGTGCAAGAGTTCAACACTGC...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAGCACCAGTGTCCATCTaGCAGACATACACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTAPVSI*QTYTEP
Trigger: CGGCTCTGTGTATGTCTGGCAGATGGACACTGGTGC...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAATTGTTTCAGGTTGACTaGTGGATGACTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVELFQVD*WMTKRV
Trigger: GACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAA...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGTCACTATCCTCCCTaGTCTGCCTCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGHYPP*SASSPP
Trigger: AGGAGGCGAGGAGGCAGAGCAGGGAGGATAGTGACC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGTCCAAGCATCGGTCCTaGCATCTTCGAGCTAGCATC +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLSKHRS*HLRASI
Trigger: GATGCTAGCTCGAAGATGGCAGGACCGATGCTTGGA...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTATTCAGCTCCAAACTCTaGCCCTATCACTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVFSSKL*PYHSQE
Trigger: CTCCTGGGAGTGATAGGGGCAGAGTTTGGAGCTGAA...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGAGTGAGGTGTTCATCTaGCAGAAGGAAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRSEVFI*QKEMWL
Trigger: CAGCCACATTTCCTTCTGGCAGATGAACACCTCACT...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGACAACACCTCAAGGCTaGTGGCATCCACAACGAGGA +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLTTPQG*WHPQRG
Trigger: TCCTCGTTGTGGATGCCACCAGCCTTGAGGTGTTGT...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGCTTTTGACAAACAAGTaGTGGATGCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRLLTNK*WMLCGQ
Trigger: TTGGCCACACAGCATCCATCACTTGTTTGTCAAAAG...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTACCGAGCTGAGACCTaGTGGGGATACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHYRAET*WGYSRH
Trigger: GTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGAGGTTGACTGCTGGATaGCTAAGAGAGTCTACAGCG +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLRLTAG*LRESTA
Trigger: CGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCT...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAATTTGTCTTTATTGCTTaGACCATCAGGGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVEFVFIA*TIRELW
Trigger: CCATAACTCCCTGATGGTTCAAGCAATAAAGACAAA...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ATCCTGTTGAGTGGTATGTGTGTGCCTTTCAATCGACAGGCTGCCCATGTGGAATCTTCAGTCAGGAGTTaGATAATCAAAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: ILLSGMCVPFNRQAAHVESSVRS*IIKAST
Trigger: TGTGGAAGCTTTGATTATTCAACTCCTGACTGAAGA...TTCCACATGGGCAGCCTGTCGATTGAAAGGCACACACATACCACTCAACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACATCCAAGCATCGGTCCTaGCATCTTCGAGCTAGCATC +
Preference number: 4 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTSKHRS*HLRASI
Trigger: GATGCTAGCTCGAAGATGGCAGGACCGATGCTTGGA...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTCATCCACCAGGTCATaGTCTTCTTCCTGGACTTTG +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDSSTRS*SSSWTL
Trigger: CAAAGTCCAGGAAGAAGAGCATGACCTGGTGGATGA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGGGCCCCAAAGAACAATaGGCAGAACTAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREGPKEQ*AELGCF
Trigger: GAAACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCC...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp TTGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTGGAGGGGAATCCCTCGCCATATTTGTCCATCGTaGCATCCAGTTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: LFNLSLHNVTGGWRGIPRHICPS*HPVTIV
Trigger: CACAATTGTAACTGGATGCCACGATGGACAAATATG...GCGAGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGACACCTCAAGGCTGGTaGCATCCACAACGAGGATTT +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLRETPQGW*HPQRGF
Trigger: AAATCCTCGTTGTGGATGCCACCAGCCTTGAGGTGT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGACACCTCAAGGCTGGTaGCATCCACAACGAGGATTT +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLTPQGW*HPQRGF
Trigger: AAATCCTCGTTGTGGATGCCACCAGCCTTGAGGTGT...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTGGAGCTGATCCAGTCTaGAGAGATCTTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSGADPV*RDLRYQ
Trigger: TTGGTATCGAAGATCTCTCCAGACTGGATCAGCTCC...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACGGAGCTGATCCAGTCTaGAGAGATCTTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDGADPV*RDLRYQ
Trigger: TTGGTATCGAAGATCTCTCCAGACTGGATCAGCTCC...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGTCTCCTTGCAATAGCTaGACTATGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLSPCNS*TMAVWV
Trigger: CACCCAGACGGCCATAGTTCAGCTATTGCAAGGAGA...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACAAGCCTTCAGGGATTTaGCTGGAGCTTCGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHKPSGI*LELRGL
Trigger: CAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTT...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGCGCAGCTGAGGAGCTaGGTTCAGCATTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKAQLRS*VQHSNA
Trigger: AGCATTGGAATGCTGAACTCAGCTCCTCAGCTGCGC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGACAGTATTGACGAAATaGAATGTGTGGGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRTVLTK*NVWVLC
Trigger: GCAAAGCACCCACACATTGCATTTCGTCAATACTGT...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGGATGATGACTTTGTCTaGAGACACAAAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLDDDFV*RHKVPS
Trigger: GGAGGGGACTTTGTGTCTGCAGACAAAGTCATCATC...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTTCCAAGAGGCTATGCTaGACAGGAGGGATCAAATTT +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSSKRLC*TGGIKF
Trigger: AAATTTGATCCCTCCTGTGCAGCATAGCCTCTTGGA...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTTGTTTCTCAGCGTCTaGACAGAGCTCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHLFLSV*TELQQP
Trigger: GGGCTGCTGGAGCTCTGTGCAGACGCTGAGAAACAA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAGTGATGGATGCTGTGTaGCCAAATAACAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTVMDAV*PNNSAR
Trigger: CCGAGCACTGTTATTTGGCCACACAGCATCCATCAC...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGACAACACCTCAAGGCTaGTGGCATCCACAACGAGGA +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLTTPQG*WHPQRG
Trigger: TCCTCGTTGTGGATGCCACCAGCCTTGAGGTGTTGT...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACGATATCAGGTATCTTTaGTCATACCGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDDIRYL*SYRAET
Trigger: GGTCTCAGCTCGGTATGACCAAAGATACCTGATATC...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACCTTCTTCCTGGACTTTaGCTTCTGGGCCCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHLLPGL*LLGPRH
Trigger: ATGCCTCGGGCCCAGAAGCCAAAGTCCAGGAAGAAG...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTGGCAGTTCTCCGGATaGTGCTATGAGGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHWQFSG*CYEEGA
Trigger: AGCTCCCTCCTCATAGCACCATCCGGAGAACTGCCA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAAGGGCTACTGAGCCATaGCGTGCTCCAACTGCGATT +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKRATEP*RAPTAI
Trigger: AATCGCAGTTGGAGCACGCCATGGCTCAGTAGCCCT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGATTTTCACTAGGACCTaGGCACAACAGAGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLIFTRT*AQQRVV
Trigger: GACTACTCTCTGTTGTGCTCAGGTCCTAGTGAAAAT...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGATTTTCACTAGGACCTaGGCACAACAGAGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREIFTRT*AQQRVV
Trigger: GACTACTCTCTGTTGTGCTCAGGTCCTAGTGAAAAT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGGACCAGAAGTTGTGTaGTCTCACCACCATGAACAC +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLGPEVV*SHHHEH
Trigger: GTGTTCATGGTGGTGAGATCACACAACTTCTGGTCC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTTCATGTGATCGCCAATaGAAGTTGCATTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSSCDRQ*KLHWSY
Trigger: GTATGACCAATGCAACTTTCATTGGCGATCACATGA...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTAGCTGGAAAACACTCCTaGAGACCCTTCTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVAGKHS*RPFFFT
Trigger: AGTGAAAAAGAAGGGTCTTCAGGAGTGTTTTCCAGC...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAATGTGTGGGTGCTTTaGGGCCCCAAAGAACAATGG +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLNVWVL*GPKEQW
Trigger: CCATTGTTCTTTGGGGCCGCAAAGCACCCACACATT...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGTCCAAGAGGCTATGCTaGACAGGAGGGATCAAATTT +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLRESKRLC*TGGIKF
Trigger: AAATTTGATCCCTCCTGTGCAGCATAGCCTCTTGGA...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGGGCTTCCTGTTTCTCTaGTATGTCTGCTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREGFLFL*YVCYVP
Trigger: TGGAACATAGCAGACATAGCAGAGAAACAGGAAGCC...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTGCTGTGATTCCCATTaGACAACGATCCAGCGCACC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHCCDSH*TTIQRT
Trigger: GGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACATTCGTTGCAAGGGTTTaGAGCTTATGGTGGGCCATA +
Preference number: 4 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTFVARV*SLWWAI
Trigger: TATGGCCCACCATAAGCTGCAAACCCTTGCAACGAA...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAATTCAGCTCCAAACTCTaGCCCTATCACTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKFSSKL*PYHSQE
Trigger: CTCCTGGGAGTGATAGGGGCAGAGTTTGGAGCTGAA...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACGTGGTGTGTATACTCTaGTGGGACTGGGTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHVVCIL*WDWVFA
Trigger: AGCGAACACCCAGTCCCAGCAGAGTATACACACCAC...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGTGATGGATGCTGTGTaGCCAAATAACAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLVMDAV*PNNSAR
Trigger: CCGAGCACTGTTATTTGGCCACACAGCATCCATCAC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACTCAAAGAAAAGCACATaGATATCCGGGTCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDSKKST*ISGSVR
Trigger: CCTAACAGACCCGGATATCCATGTGCTTTTCTTTGA...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
3UTR CAA 72 bp CAAAGAAAAGCACATGGATATCCGGGTCTGTTAGGTTaGTCTTTATTGCTTGAACCATCAGGGAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: QRKAHGYPGLLG*SLLLEPSGSYG
Trigger: CCCATAACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAACAGACCCGGATATCCATGTGCTTTTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
3UTR CAA 72 bp TGCAGTATTCGGCCTAGAGGCTTCTTCAGTCAGGAGTaGAATAATCAAAGCTTCCACATCAAAGAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: CSIRPRGFFSQE*NNQSFHIKEKH
Trigger: GTGCTTTTCTTTGATGTGGAAGCTTTGATTATTCAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR TCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGAACTCTTTATCTTTCTaGTCCAAGAGGCTATGCTGC +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLRENSLSF*SKRLCC
Trigger: GCAGCATAGCCTCTTGGATCAGAAAGATAAAGAGTT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGGAATCACACTTAGCTaGTCGATAATTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLGITLS*SIIPAG
Trigger: CCCTGCTGGAATTATCGATCAGCTAAGTGTGATTCC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACATATGTCCCAAATTATaGCGGAAAAATCCACACCTC +
Preference number: 4 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDICPKL*RKNPHL
Trigger: GAGGTGTGGATTTTTCCGTCATAATTTGGGACATAT...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGGTGATCTCACCACCATaGACACAGAAGATATGTTTC +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREVISPP*TQKICF
Trigger: GAAACATATCTTCTGTGTTCATGGTGGTGAGATCAC...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGACCAGAAGTTGTGTaGTCTCACCACCATGAACAC +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGPEVV*SHHHEH
Trigger: GTGTTCATGGTGGTGAGATCACACAACTTCTGGTCC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAAGGTTGACTGCTGGATaGCTAAGAGAGTCTACAGCG +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKRLTAG*LRESTA
Trigger: CGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAAATGCTTCCCAGGAGTaGGGTGTTCATCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKNASQE*GVHLPE
Trigger: TTCTGGCAGATGAACACCTCACTCCTGGGAAGCATT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGATCCAGTTACAATTGTaGCCCCATCATCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREIQLQL*PHHLST
Trigger: TGTTGACAGATGATGGGGGCACAATTGTAACTGGAT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGACTGGTAGAACTGTATaGCAGTGTGTGTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLTGRTV*QCVCRL
Trigger: TAGCCTGCACACACACTGGCATACAGTTCTACCAGT...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGATGATGACTTTGTCTaGAGACACAAAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLDDDFV*RHKVPS
Trigger: GGAGGGGACTTTGTGTCTGCAGACAAAGTCATCATC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGTTGTTTCAGGTTGACTaGTGGATGACTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLLFQVD*WMTKRV
Trigger: GACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAA...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAACTCTGGGGAAATAAGTaGAGTATTCGGCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKLWGNK*SIRPRG
Trigger: GCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAG...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGCCCCAAAGAACAATaGGCAGAACTAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGPKEQ*AELGCF
Trigger: GAAACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGGAGCTGATCCAGTCTaGAGAGATCTTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLGADPV*RDLRYQ
Trigger: TTGGTATCGAAGATCTCTCCAGACTGGATCAGCTCC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACCTACAGAGTGGTCACTaGCTACGGAACAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHLQSGH*LRNRCS
Trigger: ACTGCATCTGTTCCGTAGCCAGTGACCACTCTGTAG...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAACTACAGAGTGGTCACTaGCTACGGAACAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKLQSGH*LRNRCS
Trigger: ACTGCATCTGTTCCGTAGCCAGTGACCACTCTGTAG...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGCTTTTGACAAACAAGTaGTGGATGCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLLLTNK*WMLCGQ
Trigger: TTGGCCACACAGCATCCATCACTTGTTTGTCAAAAG...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGAATCACACTTAGCTaGTCGATAATTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGITLS*SIIPAG
Trigger: CCCTGCTGGAATTATCGATCAGCTAAGTGTGATTCC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGATATGTCCCAAATTATaGCGGAAAAATCCACACCTC +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREICPKL*RKNPHL
Trigger: GAGGTGTGGATTTTTCCGTCATAATTTGGGACATAT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTAATATGTCCCAAATTATaGCGGAAAAATCCACACCTC +
Preference number: 4 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVICPKL*RKNPHL
Trigger: GAGGTGTGGATTTTTCCGTCATAATTTGGGACATAT...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAATATTCGCCAGGGATATaGTGGACAACAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKYSPGI*WTTDAE
Trigger: CTCAGCATCTGTTGTCCATCATATCCCTGGCGAATA...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACGATGATGACTTTGTCTaGAGACACAAAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHDDDFV*RHKVPS
Trigger: GGAGGGGACTTTGTGTCTGCAGACAAAGTCATCATC...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGCATATTTGTCCATCGTaGCATCCAGTTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: TSYSLSYRGSCLSICLREHICPS*HPVTIV
Trigger: CACAATTGTAACTGGATGCCACGATGGACAAATATG...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGAGGTTCGTTGCTGTTaGGAATCACACTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLEVRCC*ESHLAD
Trigger: ATCAGCTAAGTGTGATTCCCAACAGCAACGAACCTC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGATATCAGGTATCTTTaGTCATACCGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLDIRYL*SYRAET
Trigger: GGTCTCAGCTCGGTATGACCAAAGATACCTGATATC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAAAGTGACCTCTGTGTaGATGCACAAAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLKVTSV*MHKKRC
Trigger: GCATCTCTTTTTGTGCATTCACACAGAGGTCACTTT...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAATTTTCACTAGGACCTaGGCACAACAGAGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKIFTRT*AQQRVV
Trigger: GACTACTCTCTGTTGTGCTCAGGTCCTAGTGAAAAT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGACAGTATTGACGAAATaGAATGTGTGGGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLTVLTK*NVWVLC
Trigger: GCAAAGCACCCACACATTGCATTTCGTCAATACTGT...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGATTGGCTCAGTATCCTaGATTCCACTCATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLIGSVS*IPLISE
Trigger: CTCTGAAATGAGTGGAATGCAGGATACTGAGCCAAT...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAATCCAAGAGGCTATGCTaGACAGGAGGGATCAAATTT +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKSKRLC*TGGIKF
Trigger: AAATTTGATCCCTCCTGTGCAGCATAGCCTCTTGGA...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGCTTCCTGTTTCTCTaGTATGTCTGCTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGFLFL*YVCYVP
Trigger: TGGAACATAGCAGACATAGCAGAGAAACAGGAAGCC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACGAGGTTCGTTGCTGTTaGGAATCACACTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHEVRCC*ESHLAD
Trigger: ATCAGCTAAGTGTGATTCCCAACAGCAACGAACCTC...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTGTTCCTTCCCATCATaGGCCATGAGGATAACATTC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHCSFPS*AMRITF
Trigger: GAATGTTATCCTCATGGCCCATGATGGGAAGGAACA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACAAAGTGACCTCTGTGTaGATGCACAAAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHKVTSV*MHKKRC
Trigger: GCATCTCTTTTTGTGCATTCACACAGAGGTCACTTT...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAAACTCTTTATCTTTCTaGTCCAAGAGGCTATGCTGC +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKNSLSF*SKRLCC
Trigger: GCAGCATAGCCTCTTGGATCAGAAAGATAAAGAGTT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACAACTCTTTATCTTTCTaGTCCAAGAGGCTATGCTGC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHNSLSF*SKRLCC
Trigger: GCAGCATAGCCTCTTGGATCAGAAAGATAAAGAGTT...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACGTGATCTCACCACCATaGACACAGAAGATATGTTTC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHVISPP*TQKICF
Trigger: GAAACATATCTTCTGTGTTCATGGTGGTGAGATCAC...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR TCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGAACAGATGCAGTGTTaGACTCTTGCACTACAGTTT +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKEQMQC*TLALQF
Trigger: AAACTGTAGTGCAAGAGTTCAACACTGCATCTGTTC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAATTTCAGGTTGACTGCTaGATGACTAAGAGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKFQVDC*MTKRVY
Trigger: GTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAA...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTCAAAGAAAAGCACATaGATATCCGGGTCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHSKKST*ISGSVR
Trigger: CCTAACAGACCCGGATATCCATGTGCTTTTCTTTGA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGTTGTCAAATGCCTCTTaGAAGCTAATACAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: QITSYSLSYRGSCLSICLLSNAS*KLIQVV
Trigger: GACAACTTGTATTAGCTTGCAAGAGGCATTTGACAA...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR GCA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAATAGTTTCTTTCACTTaGTGGAAAAGAACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKIVSFT*WKRTAA
Trigger: AGCAGCGGTTCTTTTCCAGCAAGTGAAAGAAACTAT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR GCA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACTTGTCAAATGCCTCTTaGAAGCTAATACAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHLSNAS*KLIQVV
Trigger: GACAACTTGTATTAGCTTGCAAGAGGCATTTGACAA...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp GAAGGCGGGTGGTCTGGCTGTGGCGATGAGAGACAGGGCGTGCCTTaGGGAGCGGGCAGAGTCAGCTGCAGGGCTCAGAGGCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: EGGWSGCGDERQGVP*GAGRVSCRAQRQPH
Trigger: ATGGGGCTGCCTCTGAGCCCTGCAGCTGACTCTGCCCGCTCCGCAAGGCACGCCCTGTCTCTCATCGCCACAGCCAGACCACCCGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp GTGATGAAGGCGGGTGGTCTGGCTGTGGCGATGAGAGACAGGGCGTaGCTTGCGGAGCGGGCAGAGTCAGCTGCAGGGCTCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: VMKAGGLAVAMRDRA*LAERAESAAGLRGS
Trigger: GCTGCCTCTGAGCCCTGCAGCTGACTCTGCCCGCTCCGCAAGGCACGCCCTGTCTCTCATCGCCACAGCCAGACCACCCGCCTTCATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp CCAGATGAGCCGGGCCAACTTAAGGGCGTTGTGGGAGCCAGGGGATaGTGGCTGCACTGGAGGGACCTGGTAGGTCTTGATGCAGCGCAG +
Preference number: 5 (lower is better)
Translates to: PDEPGQLKGVVGARG*WLHWRDLVGLDAAQ
Trigger: CTGCGCTGCATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCCCTGGCTCCCACAACGCCCTTAAGTTGGCCCGGCTCATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp GATGAGCCGGGCCAACTTAAGGGCGTTGTGGGAGCCAGGGGATGCTaGCTGCACTGGAGGGACCTGGTAGGTCTTGATGCAGCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: DEPGQLKGVVGARGC*LHWRDLVGLDAAQL
Trigger: CAGCTGCGCTGCATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCCCTGGCTCCCACAACGCCCTTAAGTTGGCCCGGCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp CGTGTGTCTGTGGACCTCCTTAGCTATGGTGGTGATGAAGGCGGGTaGTCTGGCTGTGGCGATGAGAGACAGGGCGTGCCTTGCGGAGCG +
Preference number: 5 (lower is better)
Translates to: RVSVDLLSYGGDEGG*SGCGDERQGVPCGA
Trigger: CGCTCCGCAAGGCACGCCCTGTCTCTCATCGCCACAGCCAGACCACCCGCCTTCATCACCACCATAGCTAAGGAGGTCCACAGACACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp GGCGATGAGAGACAGGGCGTGCCTTGCGGAGCGGGCAGAGTCAGCTaGAGGGCTCAGAGGCAGCCCCATTGTGATGTTGGCAAGTTGTTT +
Preference number: 5 (lower is better)
Translates to: GDERQGVPCGAGRVS*RAQRQPHCDVGKLF
Trigger: AAACAACTTGCCAACATCACAATGGGGCTGCCTCTGAGCCCTGCAGCTGACTCTGCCCGCTCCGCAAGGCACGCCCTGTCTCTCATCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp GCCCCATCAGGACAGCGGACACATCCATGTAGGGCTCCCATACAGTaGACCCTCGCCCAATCAGGTCAGTGGCAGTTCTCCGGATGGTGC +
Preference number: 5 (lower is better)
Translates to: APSGQRTHPCRAPIQ*TLAQSGQWQFSGWC
Trigger: GCACCATCCGGAGAACTGCCACTGACCTGATTGGGCGAGGGTTCACTGTATGGGAGCCCTACATGGATGTGTCCGCTGTCCTGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp GGGAGCCAGGGGATGCTGGCTGCACTGGAGGGACCTGGTAGGTCTTaGTGCAGCGCAGCTGAGGAGCTGAGTTCAGCATTCCAATGCTTC +
Preference number: 5 (lower is better)
Translates to: GSQGMLAALEGPGRS*CSAAEELSSAFQCF
Trigger: GAAGCATTGGAATGCTGAACTCAGCTCCTCAGCTGCGCTGCATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCCCTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp GTGCCTTGCACGTGTGTCTGGCCAGGGAGTAGTTGGAGCCTCCGCTaGTCAAGCCAAAGCCTTCAGGGATTTGACTGGAGCTTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: VPCTCVWPGSSWSLR*SSQSLQGFDWSFEA
Trigger: GGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCCAACTACTCCCTGGCCAGACACACGTGCAAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp CCTTTAGCCCTCGCCAGGGTGGTGGTGTGTATACTCTGCTGGGACTaGGTGTTCGCTGCAAGGGCCGTGTGTCTGTGGACCTCCTTAGCT +
Preference number: 5 (lower is better)
Translates to: PLALARVVVCILCWD*VFAARAVCLWTSLA
Trigger: AGCTAAGGAGGTCCACAGACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTATACACACCACCACCCTGGCGAGGGCTAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGCACCACAGTGTCCTCTaGTGTCCGCTGAGAGCGGAT +
Preference number: 5 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKHHSVL*CPLRAD
Trigger: ATCCGCTCTCAGCGGACACAAGAGGACACTGTGGTG...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp CGCCAGGGTGGTGGTGTGTATACTCTGCTGGGACTGGGTGTTCGCTaGAAGGGCCGTGTGTCTGTGGACCTCCTTAGCTATGGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: RQGGGVYTLLGLGVR*KGRVSVDLLSYGGD
Trigger: ATCACCACCATAGCTAAGGAGGTCCACAGACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTATACACACCACCACCCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp ATACTCTGCTGGGACTGGGTGTTCGCTGCAAGGGCCGTGTGTCTGTaGACCTCCTTAGCTATGGTGGTGATGAAGGCGGGTGGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ILCWDWVFAARAVCL*TSLAMVVMKAGGLA
Trigger: AGCCAGACCACCCGCCTTCATCACCACCATAGCTAAGGAGGTCCACAGACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGAGGAGCCTGCCCTCTaGCTGGTTCCCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWEEPAL*LVPNRE
Trigger: TTCTCTGTTGGGAACCAGCAAGAGGGCAGGCTCCTC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp TTTGGTCATACCGAGCTGAGACCTGATGGGGATACAGCAGGCACGTaGCTTTGTTCCGATGGCCACGGAGGGTTCTGTGAGGGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FGHTELRPDGDTAGT*LCSDGHGGFCEGAN
Trigger: GTTGGCCCCCTCACAGAACCCTCCGTGGCCATCGGAACAAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
CDS GCA 90 bp ACTTTGGCTTCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTaGATGGCTTCCGCCGTGACGCCAGCTTGTTTAATCTGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: TLASGPEASGAAAIV*MASAVTPACLICPC
Trigger: GCAAGGACAGATTAAACAAGCTGGCGTCACGGCGGAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGAAGCCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235428.2
CDS-3UTR CAA 90 bp CTCGATAGGAGACCAAAGGACACCGTGCAGTGCGGTTTCAGCATTCCGAGGCGAGAGGAGCCTGCCCTCTaGCTGGTTCCCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: LDRRPKDTVQCGFSIPRREEPAL*LVPNRE
Trigger: TTCTCTGTTGGGAACCAGCAAGAGGGCAGGCTCCTC...TCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTCTCCTATCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGAGGAAAGAGCCCCCTTaGTCTGAACTGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKRKEPP*SELPDA
Trigger: AGCATCTGGCAGTTCAGACAAAGGGGGCTCTTTCCT...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp AATACATCTGCCATCGTTCACATCCCAGAGGCACATCTCTCCGTTTaGAGACGCGCTCACAGTGTACCGCTTGTCCCCAGAAGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: NTSAIVHIPEAHLSV*RRAHSVPLVPRSAG
Trigger: GCCTGCGCTTCTGGGGACAAGCGGTACACTGTGAGCGCGTCTGCAAACGGAGAGATGTGCCTCTGGGATGTGAACGATGGCAGATGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 90 bp AGGCCTGGTCAGCAGCTTCGGCGGTTCAATTTCAGCTCCAAACTCTaGCCCTATCACTCCCAGGAGAACAATAGCCGTGGCCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: RPGQQLRRFNFSSKL*PYHSQENNSRGLLP
Trigger: AGGAAGCAGGCCACGGCTATTGTTCTCCTGGGAGTGATAGGGGCAGAGTTTGGAGCTGAAATTGAACCGCCGAAGCTGCTGACCAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp CAGAGGCAGCCCCATTGTGATGTTGGCAAGTTGTTTCTCAGCGTCTaGACAGAGCTCCAGCAGCCCCATCAGGACAGCGGACACATCCAT +
Preference number: 5 (lower is better)
Translates to: QRQPHCDVGKLFLSV*TELQQPHQDSGHIH
Trigger: ATGGATGTGTCCGCTGTCCTGATGGGGCTGCTGGAGCTCTGTGCAGACGCTGAGAAACAACTTGCCAACATCACAATGGGGCTGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp CGCAGCGGCTTGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTaGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGTGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RSGLFNLSLHNVTGG*RGIPRLREVWGARS
Trigger: AGACCTGGCACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGCCGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072726.7
CDS CCA 90 bp AGTTGGAGCCTCCGCTGGTCAAGCCAAAGCCTTCAGGGATTTGACTaGAGCTTCGAGGCCTGGTCAGCAGCTTCGGCGGTTCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: SWSLRWSSQSLQGFD*SFEAWSAASAVQFQ
Trigger: CTGAAATTGAACCGCCGAAGCTGCTGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TCCAGCGCACCAGTGTCCATCTGCCAGACATACACAGAGCCGTCTGTGCATCCCGGGCAAGGCTTCAGCTaGTCAAATGCCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: SSAPVSICQTYTEPSVHPGQGFS*SNASCK
Trigger: CTTGCAAGAGGCATTTGACAAGCTGAAGCCTTGCCC...GGGATGCACAGACGGCTCTGTGTATGTCTGGCAGATGGACACTGGTGCGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGAAAGCCTTCAGGGATTaGACTGGAGCTTCGAGGCCT +
Preference number: 5 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWKAFRD*TGASRP
Trigger: AGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTT...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp ATACCTGTCACAGAGAGCGCCACCACAGTGTCCTCTTGTGTCCGCTaGGAGCGGATGATGCTCATGGAGCTGATCCAGTCTGGAGAGATC +
Preference number: 5 (lower is better)
Translates to: IPVTESATTVSSCVR*ERMMLMELIQSGEI
Trigger: GATCTCTCCAGACTGGATCAGCTCCATGAGCATCATCCGCTCTCAGCGGACACAAGAGGACACTGTGGTGGCGCTCTCTGTGACAGGTAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 90 bp AACCCTCGCCCAATCAGGTCAGTGGCAGTTCTCCGGATGGTGCTATaGGGAGGGAGCTTGGGACTTGGTGGCTGTAGCAGAAGATATGTC +
Preference number: 5 (lower is better)
Translates to: NPRPIRSVAVLRMVL*GGSLGLGGCSRRYV
Trigger: GACATATCTTCTGCTACAGCCACCAAGTCCCAAGCTCCCTCCTCATAGCACCATCCGGAGAACTGCCACTGACCTGATTGGGCGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp TGGTCAAGCCAAAGCCTTCAGGGATTTGACTGGAGCTTCGAGGCCTaGTCAGCAGCTTCGGCGGTTCAATTTCAGCTCCAAACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: WSSQSLQGFDWSFEA*SAASAVQFQLQTLP
Trigger: GGGCAGAGTTTGGAGCTGAAATTGAACCGCCGAAGCTGCTGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTTGGCTTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp GAAGATATGTCAGTGCCTTGCACGTGTGTCTGGCCAGGGAGTAGTTaGAGCCTCCGCTGGTCAAGCCAAAGCCTTCAGGGATTTGACTGG +
Preference number: 5 (lower is better)
Translates to: EDMSVPCTCVWPGSS*SLRWSSQSLQGFDW
Trigger: CCAGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCCAACTACTCCCTGGCCAGACACACGTGCAAGGCACTGACATATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp TCAGGTCAGTGGCAGTTCTCCGGATGGTGCTATGAGGAGGGAGCTTaGGACTTGGTGGCTGTAGCAGAAGATATGTCAGTGCCTTGCACG +
Preference number: 5 (lower is better)
Translates to: SGQWQFSGWCYEEGA*DLVAVAEDMSVPCT
Trigger: CGTGCAAGGCACTGACATATCTTCTGCTACAGCCACCAAGTCCCAAGCTCCCTCCTCATAGCACCATCCGGAGAACTGCCACTGACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp GGTGGCAAGGTAACGGCCATCAGGAGCAAAGGACACCGCCGTGATTaGTCCCTTGTGCCCATGGATTGTCTGACATTTTCCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: GGKVTAIRSKGHRRD*SLVPMDCLTFSSPD
Trigger: ATCCGGACTGGAAAATGTCAGACAATCCATGGGCACAAGGGACCAATCACGGCGGTGTCCTTTGCTCCTGATGGCCGTTACCTTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp GACGCCAGCTTGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTaGAGGGGAATCCCTCGCCTTAGAGAGGTCTGGGGTGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: DASLFNLSLHNVTGG*RGIPRLREVWGARS
Trigger: AGACCTGGCACCCCAGACCTCTCTAAGGCGAGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGCTGGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235428.2
CDS-3UTR CAA 90 bp GACTTTGGCTTCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTGCATGGCATCCCAGAGACATATTaGTCCATCGTGGCATCCAGT +
Preference number: 5 (lower is better)
Translates to: DFGFWARGIWSSCHSLHGIPETY*SIVASS
Trigger: ACTGGATGCCACGATGGACAAATATGTCTCTGGGAT...GCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGAAGCCAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp AGGACACCGTGCAGTGCGGTTTCAGCATTCCGAGGCGATCGAGACAAACTTCATCACCACAGTGTCCTCTaGTGTCCGCTGAGAGCGGAT +
Preference number: 5 (lower is better)
Translates to: RTPCSAVSAFRGDRDKLHHHSVL*CPLRAD
Trigger: ATCCGCTCTCAGCGGACACAAGAGGACACTGTGGTG...ATGAAGTTTGTCTCGATCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGCAATGTGTGGGTGCTTaGCGGCCCCAAAGAACAATG +
Preference number: 5 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREQCVGA*RPQRTM
Trigger: CATTGTTCTTTGGGGCCGCAAAGCACCCACACATTG...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGGGAACAGATGCAGTGTaGAACTCTTGCACTACAGTT +
Preference number: 5 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKGTDAV*NSCTTV
Trigger: AACTGTAGTGCAAGAGTTCAACACTGCATCTGTTCC...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GCCCTGGATGGCATTGAGGGGGCAGGAAGCAAGCAACAGCCCAGTCTGAGGAAGCCGGGTCTGTTAGGTTaGTCTTTATTGCTTGAACCA +
Preference number: 5 (lower is better)
Translates to: ALDGIEGAGSKQQPSLRKPGLLG*SLLLEP
Trigger: TGGTTCAAGCAATAAAGACAAACCTAACAGACCCGG...CTTCCTCAGACTGGGCTGTTGCTTGCTTCCTGCCCCCTCAATGCCATCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGGAGGGAGCTTGGGACTaGGTGGCTGTAGCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRREGAWD*VAVAED
Trigger: ATCTTCTGCTACAGCCACCAAGTCCCAAGCTCCCTC...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp ACACCTCCAGATATCAGGTATCTTTGGTCATACCGAGCTGAGACCTaGTGGGGATACAGCAGGCACGTGACTTTGTTCCGATGGCCACGG +
Preference number: 5 (lower is better)
Translates to: TPPDIRYLWSYRAET*WGYSRHVTLFRWPR
Trigger: CCGTGGCCATCGGAACAAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAAAGATACCTGATATCTGGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGCAATGTGTGGGTGCTTaGCGGCCCCAAAGAACAATG +
Preference number: 5 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWQCVGA*RPQRTM
Trigger: CATTGTTCTTTGGGGCCGCAAAGCACCCACACATTG...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGGTTCGTTGCAAGGGTTaGCAGCTTATGGTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRVRCKG*QLMVGH
Trigger: ATGGCCCACCATAAGCTGCAAACCCTTGCAACGAAC...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGAAGCCAAAAGGTTCGTaGCAAGGGTTTGCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWKPKGS*QGFAAY
Trigger: ATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTT...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGAGCCCCATTGTGATGTaGGCAAGTTGTTTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRESPIVM*ASCFSA
Trigger: CGCTGAGAAACAACTTGCCAACATCACAATGGGGCT...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 90 bp CATCCACAACGAGGATTTCAGGGTAATGTCCATGGCAGAGGAGCCTaGCCTCTTGCTGGTTCCCAACAGAGAACTGGTAGAACTGTATGC +
Preference number: 5 (lower is better)
Translates to: HPQRGFQGNVHGRGA*PLAGSQQRTGRTVC
Trigger: GCATACAGTTCTACCAGTTCTCTGTTGGGAACCAGCAAGAGGGCAGGCTCCTCTGCCATGGACATTACCCTGAAATCCTCGTTGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGAGCCCCATTGTGATGTaGGCAAGTTGTTTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWSPIVM*ASCFSA
Trigger: CGCTGAGAAACAACTTGCCAACATCACAATGGGGCT...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp ATGGATTGTCTGACATTTTCCAGTCCGGATGTCATACAGGGCTACTaGGCCATGGCGTGCTCCAACTGCGATTCTGTGACTGCGCTCATA +
Preference number: 5 (lower is better)
Translates to: MDCLTFSSPDVIQGY*AMACSNCDSVTALI
Trigger: TATGAGCGCAGTCACAGAATCGCAGTTGGAGCACGCCATGGCTCAGTAGCCCTGTATGACATCCGGACTGGAAAATGTCAGACAATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp TTGTGTCCGCTGAGAGCGGATGATGCTCATGGAGCTGATCCAGTCTaGAGAGATCTTCGATACCAAGGAATACAACACCTCAAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: LCPLRADDAHGADPV*RDLRYQGIQHLKAG
Trigger: ACCAGCCTTGAGGTGTTGTATTCCTTGGTATCGAAGATCTCTCCAGACTGGATCAGCTCCATGAGCATCATCCGCTCTCAGCGGACACAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp CCTCAGAAGCCAAAAGGTTCGTTGCAAGGGTTTGCAGCTTATGGTGGGCCATATCAATGTGTGGGTGCTTaGCGGCCCCAAAGAACAATG +
Preference number: 5 (lower is better)
Translates to: PQKPKGSLQGFAAYGGPYQCVGA*RPQRTM
Trigger: CATTGTTCTTTGGGGCCGCAAAGCACCCACACATTG...ATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGATCCCAGAGACATATTaGTCCATCGTGGCATCCAGT +
Preference number: 5 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWIPETY*SIVASS
Trigger: ACTGGATGCCACGATGGACAAATATGTCTCTGGGAT...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGCACCACAGTGTCCTCTaGTGTCCGCTGAGAGCGGAT +
Preference number: 5 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRHHSVL*CPLRAD
Trigger: ATCCGCTCTCAGCGGACACAAGAGGACACTGTGGTG...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGCTTGTCAAATGCCTCTaGCAAGCTAATACAAGTTGT +
Preference number: 5 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWLVKCL*QANTSC
Trigger: ACAACTTGTATTAGCTTGCAAGAGGCATTTGACAAG...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGGGAACAGATGCAGTGTaGAACTCTTGCACTACAGTT +
Preference number: 5 (lower is better)
Translates to: IRQQEHLQEPLAVPSGREGTDAV*NSCTTV
Trigger: AACTGTAGTGCAAGAGTTCAACACTGCATCTGTTCC...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGGTTTGTCTTTATTGCTaGAACCATCAGGGAGTTATG +
Preference number: 5 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWVCLYC*NHQGVM
Trigger: CATAACTCCCTGATGGTTCAAGCAATAAAGACAAAC...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GTCACTTCAGTAACGAGGACTCTGCATGGCGCTAGCATCCAGGTCCAGGCCTGGTTCTTCAGTCAGGAGTaGAATAATCAAAGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: VTSVTRTLHGASIQVQAWFFSQE*NNQSFH
Trigger: GTGGAAGCTTTGATTATTCAACTCCTGACTGAAGAA...CCAGGCCTGGACCTGGATGCTAGCGCCATGCAGAGTCCTCGTTACTGAAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp AGGAGGGATCAAATTTTCCACTGCTTTCCCCACGTCGCTGCGGAATaGATCACTAGCTGGAAGGCAACTGGCAGGGAGTTTGTAGATGTA +
Preference number: 5 (lower is better)
Translates to: RRDQIFHCFPHVAAE*ITSWKATGREFVDV
Trigger: TACATCTACAAACTCCCTGCCAGTTGCCTTCCAGCTAGTGATTCATTCCGCAGCGACGTGGGGAAAGCAGTGGAAAATTTGATCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 90 bp TTGTGCCCCCATCATCTGTCAACAGTATTGACGAAATGCAATGTGTaGGTGCTTTGCGGCCCCAAAGAACAATGGGCAGAACTAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LCPHHLSTVLTKCNV*VLCGPKEQWAELGC
Trigger: ACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATGGGGGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 90 bp CTGGAGAGATCTTCGATACCAAGGAATACAACACCTCAAGGCTGGTaGCATCCACAACGAGGATTTCAGGGTAATGTCCATGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LERSSIPRNTTPQGW*HPQRGFQGNVHGRG
Trigger: TCCTCTGCCATGGACATTACCCTGAAATCCTCGTTGTGGATGCCACCAGCCTTGAGGTGTTGTATTCCTTGGTATCGAAGATCTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACGAGGAGCCTGCCCTCTaGCTGGTTCCCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDEEPAL*LVPNRE
Trigger: TTCTCTGTTGGGAACCAGCAAGAGGGCAGGCTCCTC...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp CCTCAGGCAGGGAGAAACTACCTAGTGACAGAATGGTCGCATCCTGTTGAGTGGGATAGTTTCTTTCACTaGCTGGAAAAGAACCGCTGC +
Preference number: 5 (lower is better)
Translates to: PQAGRNYLVTEWSHPVEWDSFFH*LEKNRC
Trigger: GCAGCGGTTCTTTTCCAGCAAGTGAAAGAAACTATC...CCACTCAACAGGATGCGACCATTCTGTCACTAGGTAGTTTCTCCCTGCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGTTGTTTAATCTGTCCTaGCACAATGTTACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRELFNLS*HNVTGG
Trigger: CCCTCCAGTAACATTGTGCAAGGACAGATTAAACAA...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp AAAATCCACACCTCCAGATATCAGGTATCTTTGGTCATACCGAGCTaGGACCTGATGGGGATACAGCAGGCACGTGACTTTGTTCCGATG +
Preference number: 5 (lower is better)
Translates to: KIHTSRYQVSLVIPS*DLMGIQQARDFVPM
Trigger: CATCGGAACAAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAAAGATACCTGATATCTGGAGGTGTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
CDS GCA 90 bp CATCATCTGTCAACAGTATTGACGAAATGCAATGTGTGGGTGCTTTaGGGCCCCAAAGAACAATGGGCAGAACTAGGCTGTTTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: HHLSTVLTKCNVWVL*GPKEQWAELGCFLP
Trigger: TGGCAGGAAACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 90 bp AGTCTGGAGAGATCTTCGATACCAAGGAATACAACACCTCAAGGCTaGTGGCATCCACAACGAGGATTTCAGGGTAATGTCCATGGCAGA +
Preference number: 5 (lower is better)
Translates to: SLERSSIPRNTTPQG*WHPQRGFQGNVHGR
Trigger: TCTGCCATGGACATTACCCTGAAATCCTCGTTGTGGATGCCACCAGCCTTGAGGTGTTGTATTCCTTGGTATCGAAGATCTCTCCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 90 bp AATGATGCTTCCATCTTCCCGGCCACAAACAAGTCGCCCGTGTGCTaGTATGTAGACACTCGCAGTTACTTTAAGAGGTTCGTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: NDASIFPATNKSPVC*YVDTRSYFKRFVAV
Trigger: AACAGCAACGAACCTCTTAAAGTAACTGCGAGTGTCTACATACCAGCACACGGGCGACTTGTTTGTGGCCGGGAAGATGGAAGCATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp ATTAGGCAACAAGAACATCTCCAGGAGCCACTAGCTGTCCCCTCAGGCAGGGAGTGTGTGCAGGCTAACTaGGTAAATTCAATACATCTG +
Preference number: 5 (lower is better)
Translates to: IRQQEHLQEPLAVPSGRECVQAN*VNSIHL
Trigger: CAGATGTATTGAATTTACCAAGTTAGCCTGCACACA...CTCCCTGCCTGAGGGGACAGCTAGTGGCTCCTGGAGATGTTCTTGTTGCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGGAGGAGCCTGCCCTCTaGCTGGTTCCCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: TSYSLSYRGSCLSICLREEEPAL*LVPNRE
Trigger: TTCTCTGTTGGGAACCAGCAAGAGGGCAGGCTCCTC...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp CCTCAGAAGCCAAAAGGTTCGTTGCAAGGGTTTGCAGCTTATGGTGGGCCATATGTCCAGATGATGACTTaGTCTGCAGACACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: PQKPKGSLQGFAAYGGPYVQMMT*SADTKS
Trigger: GGACTTTGTGTCTGCAGACAAAGTCATCATCTGGAC...ATATGGCCCACCATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGCCGTCTTGTCATGGCTaGTTTCAGGTTGACTGCTGG +
Preference number: 5 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRPSCHG*FQVDCW
Trigger: CCAGCAGTCAACCTGAAACAAGCCATGACAAGACGG...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp CCTCAAATATTGGCTCAGTATCCTGCATTCCACTCATTTCAGAGGTaGCAATCCACACCTTCAGAATACCTGTCACAGAGAGCGCCACCA +
Preference number: 5 (lower is better)
Translates to: PQILAQYPAFHSFQR*QSTPSEYLSQRAPP
Trigger: TGGTGGCGCTCTCTGTGACAGGTATTCTGAAGGTGTGGATTGTCACCTCTGAAATGAGTGGAATGCAGGATACTGAGCCAATATTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 90 bp CAGTTACAATTGTGCCCCCATCATCTGTCAACAGTATTGACGAAATaGAATGTGTGGGTGCTTTGCGGCCCCAAAGAACAATGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: QLQLCPHHLSTVLTK*NVWVLCGPKEQWAE
Trigger: TTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATGGGGGCACAATTGTAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 90 bp AATAATGATGCTTCCATCTTCCCGGCCACAAACAAGTCGCCCGTGTaGTGGTATGTAGACACTCGCAGTTACTTTAAGAGGTTCGTTGCT +
Preference number: 5 (lower is better)
Translates to: NNDASIFPATNKSPV*WYVDTRSYFKRFVA
Trigger: AGCAACGAACCTCTTAAAGTAACTGCGAGTGTCTACATACCAGCACACGGGCGACTTGTTTGTGGCCGGGAAGATGGAAGCATCATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp GACATTGCTGTACACATGAGAACTGTCGGTTGTGAAGAGCCCAAGGGGAGGAGGTGTGTGCAGGCTAACTaGGTAAATTCAATACATCTG +
Preference number: 5 (lower is better)
Translates to: DIAVHMRTVGCEEPKGRRCVQAN*VNSIHL
Trigger: CAGATGTATTGAATTTACCAAGTTAGCCTGCACACA...CCTCCTCCCCTTGGGCTCTTCACAACCGACAGTTCTCATGTGTACAGCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GTTCAGTATCTCCACTGCTGTGATTCCCATTGCACAACGATCCAGCGCACCAGTATTCCTCCTCAAATATaGGCTCAGTATCCTGCATTC +
Preference number: 5 (lower is better)
Translates to: VQYLHCCDSHCTTIQRTSIPPQI*AQYPAF
Trigger: GAATGCAGGATACTGAGCCAATATTTGAGGAGGAAT...ACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGGATAACATTCCGGTaGGAAGTCCAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSRITFR*EVQMSR
Trigger: CCGGCTCATCTGGACTTCCAACCGGAATGTTATCCT...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp GCAGTTACTTTAAGAGGTTCGTTGCTGTTGGGAATCACACTTAGCTaGTCGATAATTCCAGCAGGGCAAGGCTTCAGCTTGTCAAATGCC +
Preference number: 5 (lower is better)
Translates to: AVTLRGSLLLGITLS*SIIPAGQGFSLSNA
Trigger: GGCATTTGACAAGCTGAAGCCTTGCCCTGCTGGAATTATCGATCAGCTAAGTGTGATTCCCAACAGCAACGAACCTCTTAAAGTAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 90 bp TCGATAATTCCAGCAGGGCAAGGCTTCAGCTTGTCAAATGCCTCTTaGAAGCTAATACAAGTTGTCATCTTTAGCCCTTCATCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SIIPAGQGFSLSNAS*KLIQVVIFSPSSAS
Trigger: GGAAGCCGATGAAGGGCTAAAGATGACAACTTGTATTAGCTTGCAAGAGGCATTTGACAAGCTGAAGCCTTGCCCTGCTGGAATTATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGCAATGTGTGGGTGCTTaGCGGCCCCAAAGAACAATG +
Preference number: 5 (lower is better)
Translates to: TSYSLSYRGSCLSICLREQCVGA*RPQRTM
Trigger: CATTGTTCTTTGGGGCCGCAAAGCACCCACACATTG...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGCACCACAGTGTCCTCTaGTGTCCGCTGAGAGCGGAT +
Preference number: 5 (lower is better)
Translates to: QITSYSLSYRGSCLSICLHHSVL*CPLRAD
Trigger: ATCCGCTCTCAGCGGACACAAGAGGACACTGTGGTG...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp AAAAGAACCGCTGCTCGCTTCCCAGTTAGGAAAGAGCCCCCTTTGTCTGAACTGCTTGTCAAATGCCTCTaGCAAGCTAATACAAGTTGT +
Preference number: 5 (lower is better)
Translates to: KRTAARFPVRKEPPLSELLVKCL*QANTSC
Trigger: ACAACTTGTATTAGCTTGCAAGAGGCATTTGACAAG...CAGTTCAGACAAAGGGGGCTCTTTCCTAACTGGGAAGCGAGCAGCGGTTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGGGGCAAGGCTTCAGCTaGTCAAATGCCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TSYSLSYRGSCLSICLREGQGFS*SNASCK
Trigger: CTTGCAAGAGGCATTTGACAAGCTGAAGCCTTGCCC...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTAGTTCGTTGCAAGGGTTaGCAGCTTATGGTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVVRCKG*QLMVGH
Trigger: ATGGCCCACCATAAGCTGCAAACCCTTGCAACGAAC...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp GCCAGCATCAAACACCCTCCAGTATTTGGAGCATACGACCAAAAGTaGCCTCTGTGTGAATGCACAAAAAGAGATGCTTTGGCAATTCTG +
Preference number: 5 (lower is better)
Translates to: ASIKHPPVFGAYDQK*PLCECTKRDALAIL
Trigger: CAGAATTGCCAAAGCATCTCTTTTTGTGCATTCACACAGAGGTCACTTTTGGTCGTATGCTCCAAATACTGGAGGGTGTTTGATGCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 90 bp CATCCCAGAGACATATTTGTCCATCGTGGCATCCAGTTACAATTGTaGCCCCATCATCTGTCAACAGTATTGACGAAATGCAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: HPRDIFVHRGIQLQL*PHHLSTVLTKCNVW
Trigger: CCACACATTGCATTTCGTCAATACTGTTGACAGATGATGGGGGCACAATTGTAACTGGATGCCACGATGGACAAATATGTCTCTGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp GGCCATATTTTTAAGGGCGGCGAGACTCCGTCTTGTCATGGCTTGTTTCAGGTTTGTGTGCAGGCTAACTaGGTAAATTCAATACATCTG +
Preference number: 5 (lower is better)
Translates to: GHIFKGGETPSCHGLFQVCVQAN*VNSIHL
Trigger: CAGATGTATTGAATTTACCAAGTTAGCCTGCACACA...AACCTGAAACAAGCCATGACAAGACGGAGTCTCGCCGCCCTTAAAAATATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp GATGCTTTCTGCAGATTCTCTGGGGAAATAAGTGCAGTATTCGGCCTAGAGGCTACTTTAAGAGGTTCGTaGCTGTTGGGAATCACACTT +
Preference number: 5 (lower is better)
Translates to: DAFCRFSGEISAVFGLEATLRGS*LLGITL
Trigger: AAGTGTGATTCCCAACAGCAACGAACCTCTTAAAGT...AGCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAGAATCTGCAGAAAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAAGGATAACATTCCGGTaGGAAGTCCAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTRITFR*EVQMSR
Trigger: CCGGCTCATCTGGACTTCCAACCGGAATGTTATCCT...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGATCCCAGAGACATATTaGTCCATCGTGGCATCCAGT +
Preference number: 5 (lower is better)
Translates to: TSYSLSYRGSCLSICLREIPETY*SIVASS
Trigger: ACTGGATGCCACGATGGACAAATATGTCTCTGGGAT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTAGTCCAGATGATGACTTaGTCTGCAGACACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVVQMMT*SADTKS
Trigger: GGACTTTGTGTCTGCAGACAAAGTCATCATCTGGAC...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGACAGGCGCAGCGGCTaGTTTAATCTGTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKDRRSG*FNLSLH
Trigger: GTGCAAGGACAGATTAAACAAGCCGCTGCGCCTGTC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072726.7
CDS-3UTR CAA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACATTCCTCCTCAAATATaGGCTCAGTATCCTGCATTC +
Preference number: 5 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDIPPQI*AQYPAF
Trigger: GAATGCAGGATACTGAGCCAATATTTGAGGAGGAAT...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGGCAAGGCTTCAGCTaGTCAAATGCCTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGQGFS*SNASCK
Trigger: CTTGCAAGAGGCATTTGACAAGCTGAAGCCTTGCCC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp ACACAAGAGGAGAGTGGAGTTAAGTTTGGGTTGAAGTGTGGACACTTTCACTCTACTTTAAGAGGTTCGTaGCTGTTGGGAATCACACTT +
Preference number: 5 (lower is better)
Translates to: TQEESGVKFGLKCGHFHSTLRGS*LLGITL
Trigger: AAGTGTGATTCCCAACAGCAACGAACCTCTTAAAGT...AGAGTGAAAGTGTCCACACTTCAACCCAAACTTAACTCCACTCTCCTCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp GTGACCTCATTGCTTTGTGCCCATCTCTATGATGTGATACCATCTGTCATTGACACTTTAAGAGGTTCGTaGCTGTTGGGAATCACACTT +
Preference number: 5 (lower is better)
Translates to: VTSLLCAHLYDVIPSVIDTLRGS*LLGITL
Trigger: AAGTGTGATTCCCAACAGCAACGAACCTCTTAAAGT...GTCAATGACAGATGGTATCACATCATAGAGATGGGCACAAAGCAATGAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp AAAACACTACAAGGGTACTGGGATGACAATGCAAGGTTCACCTCAGTGTTGAGGTTAGGTTTGTCTTTATaGCTTGAACCATCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: KTLQGYWDDNARFTSVLRLGLSL*LEPSGS
Trigger: ACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAA...CCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAGTACCCTTGTAGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACAGGAAAGAGCCCCCTTaGTCTGAACTGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHRKEPP*SELPDA
Trigger: AGCATCTGGCAGTTCAGACAAAGGGGGCTCTTTCCT...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACAAAGCCTTCAGGGATTaGACTGGAGCTTCGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHKAFRD*TGASRP
Trigger: AGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTT...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAGGCATCCAGTTACAATaGTGCCCCCATCATCTGTCA +
Preference number: 5 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKGIQLQ*CPHHLS
Trigger: TGACAGATGATGGGGGCACAATTGTAACTGGATGCC...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp ACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGAGAGAGATTCCTCCTCAAATATaGGCTCAGTATCCTGCATTC +
Preference number: 5 (lower is better)
Translates to: TSYSLSYRGSCLSICLREIPPQI*AQYPAF
Trigger: GAATGCAGGATACTGAGCCAATATTTGAGGAGGAAT...CTCTCTCAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTAATTCCTCCTCAAATATaGGCTCAGTATCCTGCATTC +
Preference number: 5 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVIPPQI*AQYPAF
Trigger: GAATGCAGGATACTGAGCCAATATTTGAGGAGGAAT...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGGTCCAGATGATGACTTaGTCTGCAGACACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: QITSYSLSYRGSCLSICLVQMMT*SADTKS
Trigger: GGACTTTGTGTCTGCAGACAAAGTCATCATCTGGAC...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp GACTCTTCCAGCATGGAGTTTTATAGTCCTTGTGCTCTTCTGAATATACACACAGATAGTTTCTTTCACTaGCTGGAAAAGAACCGCTGC +
Preference number: 5 (lower is better)
Translates to: DSSSMEFYSPCALLNIHTDSFFH*LEKNRC
Trigger: GCAGCGGTTCTTTTCCAGCAAGTGAAAGAAACTATC...TGTGTGTATATTCAGAAGAGCACAAGGACTATAAAACTCCATGCTGGAAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTATTGTTTAATCTGTCCTaGCACAATGTTACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVLFNLS*HNVTGG
Trigger: CCCTCCAGTAACATTGTGCAAGGACAGATTAAACAA...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp ACACCCTCCAGTATTTGGAGCATACGACCAAAAGTGACCTCTGTGTaGATGCACAAAAAGAGATGCTTTGGCAATTCTGACAATAAATTG +
Preference number: 5 (lower is better)
Translates to: TPSSIWSIRPKVTSV*MHKKRCFGNSDNKL
Trigger: CAATTTATTGTCAGAATTGCCAAAGCATCTCTTTTTGTGCATTCACACAGAGGTCACTTTTGGTCGTATGCTCCAAATACTGGAGGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAATCCCAGAGACATATTaGTCCATCGTGGCATCCAGT +
Preference number: 5 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKIPETY*SIVASS
Trigger: ACTGGATGCCACGATGGACAAATATGTCTCTGGGAT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp AAGTTTGGGTTGAAGTGTGGACACTTTCACTCTAGTGTCCATTCTAACAGACTGTTAGGTTTGTCTTTATaGCTTGAACCATCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: KFGLKCGHFHSSVHSNRLLGLSL*LEPSGS
Trigger: ACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAA...CAGTCTGTTAGAATGGACACTAGAGTGAAAGTGTCCACACTTCAACCCAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp AGGTTTAGTAAACAACAGCGTGTCTGGGAAATCCAAAGGGAAGTCACTTCAGTATTCTTCAGTCAGGAGTaGAATAATCAAAGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: RFSKQQRVWEIQREVTSVFFSQE*NNQSFH
Trigger: GTGGAAGCTTTGATTATTCAACTCCTGACTGAAGAA...TACTGAAGTGACTTCCCTTTGGATTTCCCAGACACGCTGTTGTTTACTAAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp TTGGCAATTCTGACAATAAATTGGTTTGGATTCCTCCTCAAATATTaGCTCAGTATCCTGCATTCCACTCATTTCAGAGGTGACAATCCA +
Preference number: 5 (lower is better)
Translates to: LAILTINWFGFLLKY*LSILHSTHFRGDNP
Trigger: TGGATTGTCACCTCTGAAATGAGTGGAATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAACCAATTTATTGTCAGAATTGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGACTTTAAGAGGTTCGTaGCTGTTGGGAATCACACTT +
Preference number: 5 (lower is better)
Translates to: QITSYSLSYRGSCLSICLTLRGS*LLGITL
Trigger: AAGTGTGATTCCCAACAGCAACGAACCTCTTAAAGT...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAAAGCCAAAAGGTTCGTaGCAAGGGTTTGCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKKPKGS*QGFAAY
Trigger: ATAAGCTGCAAACCCTTGCAACGAACCTTTTGGCTT...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAACCGGGTCTGTTAGGTTaGTCTTTATTGCTTGAACCA +
Preference number: 5 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKPGLLG*SLLLEP
Trigger: TGGTTCAAGCAATAAAGACAAACCTAACAGACCCGG...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 90 bp TGTGAATGCACAAAAAGAGATGCTTTGGCAATTCTGACAATAAATTaGTTTGGATTCCTCCTCAAATATTGGCTCAGTATCCTGCATTCC +
Preference number: 5 (lower is better)
Translates to: CECTKRDALAILTIN*FGFLLKYWLSILHS
Trigger: GGAATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAACCAATTTATTGTCAGAATTGCCAAAGCATCTCTTTTTGTGCATTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS-3UTR CAA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGTGTGTGCAGGCTAACTaGGTAAATTCAATACATCTG +
Preference number: 5 (lower is better)
Translates to: QITSYSLSYRGSCLSICLCVQAN*VNSIHL
Trigger: CAGATGTATTGAATTTACCAAGTTAGCCTGCACACA...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp CAAATAACATCTTACTCTTTAAGTTACCGTGGGTCCTGTCTATCTATATGCCTGCTTGTCAAATGCCTCTaGCAAGCTAATACAAGTTGT +
Preference number: 5 (lower is better)
Translates to: QITSYSLSYRGSCLSICLLVKCL*QANTSC
Trigger: ACAACTTGTATTAGCTTGCAAGAGGCATTTGACAAG...CAGGCATATAGATAGACAGGACCCACGGTAACTTAAAGAGTAAGATGTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235648.2
CDS-3UTR CAA 90 bp TGTCTTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAACTTGTCAAATGCCTCTaGCAAGCTAATACAAGTTGT +
Preference number: 5 (lower is better)
Translates to: CLYIYRDGSKCCVNKINKLVKCL*QANTSC
Trigger: ACAACTTGTATTAGCTTGCAAGAGGCATTTGACAAG...TTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS-3UTR CAA 90 bp TTTATATTTACAGGGACGGGTCCAAGTGCTGTGTCAACAAAATCAATAAAACACGTTTGTCTTTATTGCTaGAACCATCAGGGAGTTATG +
Preference number: 5 (lower is better)
Translates to: FIFTGTGPSAVSTKSIKHVCLYC*NHQGVM
Trigger: CATAACTCCCTGATGGTTCAAGCAATAAAGACAAAC...GTGTTTTATTGATTTTGTTGACACAGCACTTGGACCCGTCCCTGTAAATATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 90 bp CACAGAAGATATGTTTCATTTCTCCAGAAAATATGTCCCAAATTATaGCGGAAAAATCCACACCTCCAGATATCAGGTATCTTTGGTCAT +
Preference number: 5 (lower is better)
Translates to: HRRYVSFLQKICPKL*RKNPHLQISGIFGH
Trigger: ATGACCAAAGATACCTGATATCTGGAGGTGTGGATTTTTCCGTCATAATTTGGGACATATTTTCTGGAGAAATGAAACATATCTTCTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
CDS GCA 72 bp GCGGGTGGTCTGGCTGTGGCGATGAGAGACAGGGCGTaGCTTGCGGAGCGGGCAGAGTCAGCTGCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: AGGLAVAMRDRA*LAERAESAAGL
Trigger: GAGCCCTGCAGCTGACTCTGCCCGCTCCGCAAGGCACGCCCTGTCTCTCATCGCCACAGCCAGACCACCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp TGGTCTGGCTGTGGCGATGAGAGACAGGGCGTGCCTTaGGGAGCGGGCAGAGTCAGCTGCAGGGCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: WSGCGDERQGVP*GAGRVSCRAQR
Trigger: CCTCTGAGCCCTGCAGCTGACTCTGCCCGCTCCGCAAGGCACGCCCTGTCTCTCATCGCCACAGCCAGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp AGACAGGGCGTGCCTTGCGGAGCGGGCAGAGTCAGCTaGAGGGCTCAGAGGCAGCCCCATTGTGATGTTGGC +
Preference number: 6 (lower is better)
Translates to: RQGVPCGAGRVS*RAQRQPHCDVG
Trigger: GCCAACATCACAATGGGGCTGCCTCTGAGCCCTGCAGCTGACTCTGCCCGCTCCGCAAGGCACGCCCTGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp AAGGGCGTTGTGGGAGCCAGGGGATGCTGGCTGCACTaGAGGGACCTGGTAGGTCTTGATGCAGCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: KGVVGARGCWLH*RDLVGLDAAQL
Trigger: CAGCTGCGCTGCATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCCCTGGCTCCCACAACGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp CCGGGCCAACTTAAGGGCGTTGTGGGAGCCAGGGGATaGTGGCTGCACTGGAGGGACCTGGTAGGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: PGQLKGVVGARG*WLHWRDLVGLD
Trigger: ATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCCCTGGCTCCCACAACGCCCTTAAGTTGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp CTCGCCAGGGTGGTGGTGTGTATACTCTGCTGGGACTaGGTGTTCGCTGCAAGGGCCGTGTGTCTGTGGACC +
Preference number: 6 (lower is better)
Translates to: LARVVVCILCWD*VFAARAVCLWT
Trigger: GGTCCACAGACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTATACACACCACCACCCTGGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 72 bp TTGGAAGTCCAGATGAGCCGGGCCAACTTAAGGGCGTaGTGGGAGCCAGGGGATGCTGGCTGCACTGGAGGG +
Preference number: 6 (lower is better)
Translates to: LEVQMSRANLRA*WEPGDAGCTGG
Trigger: CCCTCCAGTGCAGCCAGCATCCCCTGGCTCCCACAACGCCCTTAAGTTGGCCCGGCTCATCTGGACTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp CCTTTAGCCCTCGCCAGGGTGGTGGTGTGTATACTCTaGTGGGACTGGGTGTTCGCTGCAAGGGCCGTGTGT +
Preference number: 6 (lower is better)
Translates to: PLALARVVVCIL*WDWVFAARAVC
Trigger: ACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTATACACACCACCACCCTGGCGAGGGCTAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp GTGGACCTCCTTAGCTATGGTGGTGATGAAGGCGGGTaGTCTGGCTGTGGCGATGAGAGACAGGGCGTGCCT +
Preference number: 6 (lower is better)
Translates to: VDLLSYGGDEGG*SGCGDERQGVP
Trigger: AGGCACGCCCTGTCTCTCATCGCCACAGCCAGACCACCCGCCTTCATCACCACCATAGCTAAGGAGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp TTAGCCCTCGCCAGGGTGGTGGTGTGTATACTCTGCTaGGACTGGGTGTTCGCTGCAAGGGCCGTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: LALARVVVCILC*DWVFAARAVCL
Trigger: CAGACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTATACACACCACCACCCTGGCGAGGGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp GGCCAACTTAAGGGCGTTGTGGGAGCCAGGGGATGCTaGCTGCACTGGAGGGACCTGGTAGGTCTTGATGCA +
Preference number: 6 (lower is better)
Translates to: GQLKGVVGARGC*LHWRDLVGLDA
Trigger: TGCATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCCCTGGCTCCCACAACGCCCTTAAGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 72 bp GGAGCCTCCGCTGGTCAAGCCAAAGCCTTCAGGGATTaGACTGGAGCTTCGAGGCCTGGTCAGCAGCTTCGG +
Preference number: 6 (lower is better)
Translates to: GASAGQAKAFRD*TGASRPGQQLR
Trigger: CCGAAGCTGCTGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 72 bp GGGATGCTGGCTGCACTGGAGGGACCTGGTAGGTCTTaGTGCAGCGCAGCTGAGGAGCTGAGTTCAGCATTC +
Preference number: 6 (lower is better)
Translates to: GMLAALEGPGRS*CSAAEELSSAF
Trigger: GAATGCTGAACTCAGCTCCTCAGCTGCGCTGCATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 72 bp GCCGAGCTGAGACCTGATGGGGATACAGCAGGCACGTaGCTTTGTTCCGATGGCCACGGAGGGTTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: AELRPDGDTAGT*LCSDGHGGFCE
Trigger: CTCACAGAACCCTCCGTGGCCATCGGAACAAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS GCA 72 bp TCTGGGCCCGAGGCATCTGGAGCAGCTGCCATAGTCTaGATGGCTTCCGCCGTGACGCCAGCTTGTTTAATC +
Preference number: 6 (lower is better)
Translates to: SGPEASGAAAIV*MASAVTPACLI
Trigger: GATTAAACAAGCTGGCGTCACGGCGGAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235428.2
CDS CCA 72 bp CTCCGCTGGTCAAGCCAAAGCCTTCAGGGATTTGACTaGAGCTTCGAGGCCTGGTCAGCAGCTTCGGCGGTT +
Preference number: 6 (lower is better)
Translates to: LRWSSQSLQGFD*SFEAWSAASAV
Trigger: AACCGCCGAAGCTGCTGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp TCAGTGCCTTGCACGTGTGTCTGGCCAGGGAGTAGTTaGAGCCTCCGCTGGTCAAGCCAAAGCCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: SVPCTCVWPGSS*SLRWSSQSLQG
Trigger: TCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCCAACTACTCCCTGGCCAGACACACGTGCAAGGCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp ACCCTCGCCCAATCAGGTCAGTGGCAGTTCTCCGGATaGTGCTATGAGGAGGGAGCTTGGGACTTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: TLAQSGQWQFSG*CYEEGAWDLVA
Trigger: AGCCACCAAGTCCCAAGCTCCCTCCTCATAGCACCATCCGGAGAACTGCCACTGACCTGATTGGGCGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp TGGGACTGGGTGTTCGCTGCAAGGGCCGTGTGTCTGTaGACCTCCTTAGCTATGGTGGTGATGAAGGCGGGT +
Preference number: 6 (lower is better)
Translates to: WDWVFAARAVCL*TSLAMVVMKAG
Trigger: ACCCGCCTTCATCACCACCATAGCTAAGGAGGTCCACAGACACACGGCCCTTGCAGCGAACACCCAGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 90 bp GGAGTAGTTGGAGCCTCCGCTGGTCAAGCCAAAGCCTTCAGGGATTaGACTGGAGCTTCGAGGCCTGGTCAGCAGCTTCGGCGGTTCAAT +
Preference number: 6 (lower is better)
Translates to: GVVGASAGQAKAFRD*TGASRPGQQLRRFN
Trigger: ATTGAACCGCCGAAGCTGCTGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCCAACTACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 72 bp ACCGAGCTGAGACCTGATGGGGATACAGCAGGCACGTaGCTTTGTTCCGATGGCCACGGAGGGTTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: TELRPDGDTAGT*LCSDGHGGFCE
Trigger: CTCACAGAACCCTCCGTGGCCATCGGAACAAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
CDS TCA 72 bp GGACAGCGGACACATCCATGTAGGGCTCCCATACAGTaGACCCTCGCCCAATCAGGTCAGTGGCAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: GQRTHPCRAPIQ*TLAQSGQWQFS
Trigger: GGAGAACTGCCACTGACCTGATTGGGCGAGGGTTCACTGTATGGGAGCCCTACATGGATGTGTCCGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp GCCATCGTTCACATCCCAGAGGCACATCTCTCCGTTTaGAGACGCGCTCACAGTGTACCGCTTGTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: AIVHIPEAHLSV*RRAHSVPLVPR
Trigger: TCTGGGGACAAGCGGTACACTGTGAGCGCGTCTGCAAACGGAGAGATGTGCCTCTGGGATGTGAACGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp ACGTGTGTCTGGCCAGGGAGTAGTTGGAGCCTCCGCTaGTCAAGCCAAAGCCTTCAGGGATTTGACTGGAGC +
Preference number: 6 (lower is better)
Translates to: TCVWPGSSWSLR*SSQSLQGFDWS
Trigger: GCTCCAGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCCAACTACTCCCTGGCCAGACACACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 72 bp TGCCATCGTTCACATCCCAGAGGCACATCTCTCCGTTaGCAGACGCGCTCACAGTGTACCGCTTGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: CHRSHPRGTSLR*QTRSQCTACPQ
Trigger: CTGGGGACAAGCGGTACACTGTGAGCGCGTCTGCAAACGGAGAGATGTGCCTCTGGGATGTGAACGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CAA 72 bp AGGGCTCAGAGGCAGCCCCATTGTGATGTTGGCAAGTaGTTTCTCAGCGTCTGCACAGAGCTCCAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: RAQRQPHCDVGK*FLSVCTELQQP
Trigger: GGGCTGCTGGAGCTCTGTGCAGACGCTGAGAAACAACTTGCCAACATCACAATGGGGCTGCCTCTGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 90 bp CAATACATCTGCCATCGTTCACATCCCAGAGGCACATCTCTCCGTTaGCAGACGCGCTCACAGTGTACCGCTTGTCCCCAGAAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: QYICHRSHPRGTSLR*QTRSQCTACPQKRR
Trigger: CCTGCGCTTCTGGGGACAAGCGGTACACTGTGAGCGCGTCTGCAAACGGAGAGATGTGCCTCTGGGATGTGAACGATGGCAGATGTATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp CCAATCAGGTCAGTGGCAGTTCTCCGGATGGTGCTATaGGGAGGGAGCTTGGGACTTGGTGGCTGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: PIRSVAVLRMVL*GGSLGLGGCSR
Trigger: TCTGCTACAGCCACCAAGTCCCAAGCTCCCTCCTCATAGCACCATCCGGAGAACTGCCACTGACCTGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp GGTGGTGTGTATACTCTGCTGGGACTGGGTGTTCGCTaGAAGGGCCGTGTGTCTGTGGACCTCCTTAGCTAT +
Preference number: 6 (lower is better)
Translates to: GGVYTLLGLGVR*KGRVSVDLLSY
Trigger: ATAGCTAAGGAGGTCCACAGACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGTATACACACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp GCCAGAAGGAAATGTGGCTGTCGGTGTTCGAGTAGGTaGCAAGGTAACGGCCATCAGGAGCAAAGGACACCG +
Preference number: 6 (lower is better)
Translates to: ARRKCGCRCSSR*QGNGHQEQRTP
Trigger: CGGTGTCCTTTGCTCCTGATGGCCGTTACCTTGCCACCTACTCGAACACCGACAGCCACATTTCCTTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 90 bp AAGCGGTGTTCCTTCCCATCATGGGCCATGAGGATAACATTCCGGTaGGAAGTCCAGATGAGCCGGGCCAACTTAAGGGCGTTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: KRCSFPSWAMRITFR*EVQMSRANLRALWE
Trigger: CTCCCACAACGCCCTTAAGTTGGCCCGGCTCATCTGGACTTCCAACCGGAATGTTATCCTCATGGCCCATGATGGGAAGGAACACCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 90 bp TGGAGCAGCTGCCATAGTCTGCATGGCTTCCGCCGTGACGCCAGCTaGTTTAATCTGTCCTTGCACAATGTTACTGGAGGGTGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: WSSCHSLHGFRRDAS*FNLSLHNVTGGWRG
Trigger: TCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGCTGGCGTCACGGCGGAAGCCATGCAGACTATGGCAGCTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235428.2
CDS TCA 72 bp GGCCACGGAGGGTTCTGTGAGGGGGCCAACCTCTTCTaGGCATGTGTTCTCCTTGCAATAGCTGAACTATGG +
Preference number: 6 (lower is better)
Translates to: GHGGFCEGANLF*ACVLLAIAELW
Trigger: CCATAGTTCAGCTATTGCAAGGAGAACACATGCTCAGAAGAGGTTGGCCCCCTCACAGAACCCTCCGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 72 bp CTCTCCAGCCCCAGCAGGTCAGGCAACATAACACAGTaGATGGCGGCTAACTGGCTCCAGCCTTCATTTACT +
Preference number: 6 (lower is better)
Translates to: LSSPSRSGNITQ*MAANWLQPSFT
Trigger: AGTAAATGAAGGCTGGAGCCAGTTAGCCGCCATGCACTGTGTTATGTTGCCTGACCTGCTGGGGCTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072726.7
CDS GCA 72 bp CAGCAGCTTCGGCGGTTCAATTTCAGCTCCAAACTCTaGCCCTATCACTCCCAGGAGAACAATAGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: QQLRRFNFSSKL*PYHSQENNSRG
Trigger: GCCACGGCTATTGTTCTCCTGGGAGTGATAGGGGCAGAGTTTGGAGCTGAAATTGAACCGCCGAAGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp TGCAGCGCAGCTGAGGAGCTGAGTTCAGCATTCCAATaGTTCCCAGGAGTGAGGTGTTCATCTGCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: CSAAEELSSAFQ*FPGVRCSSARR
Trigger: CCTTCTGGCAGATGAACACCTCACTCCTGGGAAGCATTGGAATGCTGAACTCAGCTCCTCAGCTGCGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 72 bp AATACCTGTCACAGAGAGCGCCACCACAGTGTCCTCTaGTGTCCGCTGAGAGCGGATGATGCTCATGGAGCT +
Preference number: 6 (lower is better)
Translates to: NTCHRERHHSVL*CPLRADDAHGA
Trigger: AGCTCCATGAGCATCATCCGCTCTCAGCGGACACAAGAGGACACTGTGGTGGCGCTCTCTGTGACAGGTATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CAA 72 bp TCCTTCCCATCATGGGCCATGAGGATAACATTCCGGTaGGAAGTCCAGATGAGCCGGGCCAACTTAAGGGCG +
Preference number: 6 (lower is better)
Translates to: SFPSWAMRITFR*EVQMSRANLRA
Trigger: CGCCCTTAAGTTGGCCCGGCTCATCTGGACTTCCAACCGGAATGTTATCCTCATGGCCCATGATGGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 72 bp GGCTTCCGCCGTGACGCCAGCTTGTTTAATCTGTCCTaGCACAATGTTACTGGAGGGTGGAGGGGAATCCCT +
Preference number: 6 (lower is better)
Translates to: GFRRDASLFNLS*HNVTGGWRGIP
Trigger: AGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGCTGGCGTCACGGCGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235428.2
CDS CAA 90 bp CAGAGGCACATCTCTCCGTTTGCAGACGCGCTCACAGTGTACCGCTaGTCCCCAGAAGCGCAGGCTTTTGACAAACAAGTGATGGATGCT +
Preference number: 6 (lower is better)
Translates to: QRHISPFADALTVYR*SPEAQAFDKQVMDA
Trigger: AGCATCCATCACTTGTTTGTCAAAAGCCTGCGCTTCTGGGGACAAGCGGTACACTGTGAGCGCGTCTGCAAACGGAGAGATGTGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp CAAGGTAACGGCCATCAGGAGCAAAGGACACCGCCGTaGTTGGTCCCTTGTGCCCATGGATTGTCTGACATT +
Preference number: 6 (lower is better)
Translates to: QGNGHQEQRTPP*LVPCAHGLSDI
Trigger: AATGTCAGACAATCCATGGGCACAAGGGACCAATCACGGCGGTGTCCTTTGCTCCTGATGGCCGTTACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS GCA 72 bp CGAGGATTTCAGGGTAATGTCCATGGCAGAGGAGCCTaGCCTCTTGCTGGTTCCCAACAGAGAACTGGTAGA +
Preference number: 6 (lower is better)
Translates to: RGFQGNVHGRGA*PLAGSQQRTGR
Trigger: TCTACCAGTTCTCTGTTGGGAACCAGCAAGAGGGCAGGCTCCTCTGCCATGGACATTACCCTGAAATCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp CAAAGCCTTCAGGGATTTGACTGGAGCTTCGAGGCCTaGTCAGCAGCTTCGGCGGTTCAATTTCAGCTCCAA +
Preference number: 6 (lower is better)
Translates to: QSLQGFDWSFEA*SAASAVQFQLQ
Trigger: TTGGAGCTGAAATTGAACCGCCGAAGCTGCTGACCAGGCCTCGAAGCTCCAGTCAAATCCCTGAAGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CCA 72 bp GTAACGGCCATCAGGAGCAAAGGACACCGCCGTGATTaGTCCCTTGTGCCCATGGATTGTCTGACATTTTCC +
Preference number: 6 (lower is better)
Translates to: VTAIRSKGHRRD*SLVPMDCLTFS
Trigger: GGAAAATGTCAGACAATCCATGGGCACAAGGGACCAATCACGGCGGTGTCCTTTGCTCCTGATGGCCGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 72 bp ATCTCTCCGTTTGCAGACGCGCTCACAGTGTACCGCTaGTCCCCAGAAGCGCAGGCTTTTGACAAACAAGTG +
Preference number: 6 (lower is better)
Translates to: ISPFADALTVYR*SPEAQAFDKQV
Trigger: CACTTGTTTGTCAAAAGCCTGCGCTTCTGGGGACAAGCGGTACACTGTGAGCGCGTCTGCAAACGGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp GCTTGTCCCCAGAAGCGCAGGCTTTTGACAAACAAGTaGTGGATGCTGTGTGGCCAAATAACAGTGCTCGGG +
Preference number: 6 (lower is better)
Translates to: ACPQKRRLLTNK*WMLCGQITVLG
Trigger: CCCGAGCACTGTTATTTGGCCACACAGCATCCATCACTTGTTTGTCAAAAGCCTGCGCTTCTGGGGACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp CTGACATTTTCCAGTCCGGATGTCATACAGGGCTACTaGGCCATGGCGTGCTCCAACTGCGATTCTGTGACT +
Preference number: 6 (lower is better)
Translates to: LTFSSPDVIQGY*AMACSNCDSVT
Trigger: AGTCACAGAATCGCAGTTGGAGCACGCCATGGCTCAGTAGCCCTGTATGACATCCGGACTGGAAAATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS TCA 72 bp ACAGATGCAGTGTTGAACTCTTGCCGAGCTGAGACCTaGTGGGGATACAGCAGGCACGTGACTTTGTTCCGA +
Preference number: 6 (lower is better)
Translates to: TDAVLNSCRAET*WGYSRHVTLFR
Trigger: TCGGAACAAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGCAAGAGTTCAACACTGCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS TCA 72 bp CTACGGAACAGATGCAGTGTTGAACTCTTGCCGAGCTaGGACCTGATGGGGATACAGCAGGCACGTGACTTT +
Preference number: 6 (lower is better)
Translates to: LRNRCSVELLPS*DLMGIQQARDF
Trigger: AAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGCAAGAGTTCAACACTGCATCTGTTCCGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236956.2
CDS GCA 72 bp GCTTCCATCTTCCCGGCCACAAACAAGTCGCCCGTGTaGTGGTATGTAGACACTCGCAGTTACTTTAAGAGG +
Preference number: 6 (lower is better)
Translates to: ASIFPATNKSPV*WYVDTRSYFKR
Trigger: CCTCTTAAAGTAACTGCGAGTGTCTACATACCAGCACACGGGCGACTTGTTTGTGGCCGGGAAGATGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp TCTCTCGCAGACTTAGGAGGCCTACAGAGTGGTCACTaGCTACGGAACAGATGCAGTGTTGAACTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: SLADLGGLQSGH*LRNRCSVELLH
Trigger: GTGCAAGAGTTCAACACTGCATCTGTTCCGTAGCCAGTGACCACTCTGTAGGCCTCCTAAGTCTGCGAGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072726.7
ENSMUST00000236879.2
CDS CAA 72 bp AGAAACGACAGGCGCAGCGGCTTGTTTAATCTGTCCTaGCACAATGTTACTGGAGGGTGGAGGGGAATCCCT +
Preference number: 6 (lower is better)
Translates to: RNDRRSGLFNLS*HNVTGGWRGIP
Trigger: AGGGATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGCCGCTGCGCCTGTCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072726.7
CDS CAA 72 bp TGCCATAGTCTGCATGGCTTCCGCCGTGACGCCAGCTaGTTTAATCTGTCCTTGCACAATGTTACTGGAGGG +
Preference number: 6 (lower is better)
Translates to: CHSLHGFRRDAS*FNLSLHNVTGG
Trigger: CCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGCTGGCGTCACGGCGGAAGCCATGCAGACTATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235428.2
CDS TCA 72 bp CCCTCCAGTCCATGTCTGTCCATTTTCACTAGGACCTaGGCACAACAGAGAGTAGTCGCCAGCATCAAACAC +
Preference number: 6 (lower is better)
Translates to: PSSPCLSIFTRT*AQQRVVASIKH
Trigger: GTGTTTGATGCTGGCGACTACTCTCTGTTGTGCTCAGGTCCTAGTGAAAATGGACAGACATGGACTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp CAAATTTTCCACTGCTTTCCCCACGTCGCTGCGGAATaGATCACTAGCTGGAAGGCAACTGGCAGGGAGTTT +
Preference number: 6 (lower is better)
Translates to: QIFHCFPHVAAE*ITSWKATGREF
Trigger: AAACTCCCTGCCAGTTGCCTTCCAGCTAGTGATTCATTCCGCAGCGACGTGGGGAAAGCAGTGGAAAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp TCCATCTTCCCGGCCACAAACAAGTCGCCCGTGTGCTaGTATGTAGACACTCGCAGTTACTTTAAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: SIFPATNKSPVC*YVDTRSYFKRF
Trigger: GAACCTCTTAAAGTAACTGCGAGTGTCTACATACCAGCACACGGGCGACTTGTTTGTGGCCGGGAAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CAA 90 bp CCATCATCTGTCAACAGTATTGACGAAATGCAATGTGTGGGTGCTTaGCGGCCCCAAAGAACAATGGGCAGAACTAGGCTGTTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: PSSVNSIDEMQCVGA*RPQRTMGRTRLFPA
Trigger: GGCAGGAAACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp CAACCTCTTCTGAGCATGTGTTCTCCTTGCAATAGCTaGACTATGGCCGTCTGGGTGGCAGGCACAATAATG +
Preference number: 6 (lower is better)
Translates to: QPLLSMCSPCNS*TMAVWVAGTIM
Trigger: CATTATTGTGCCTGCCACCCAGACGGCCATAGTTCAGCTATTGCAAGGAGAACACATGCTCAGAAGAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp GATATCAGGTATCTTTGGTCATACCGAGCTGAGACCTaGTGGGGATACAGCAGGCACGTGACTTTGTTCCGA +
Preference number: 6 (lower is better)
Translates to: DIRYLWSYRAET*WGYSRHVTLFR
Trigger: TCGGAACAAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAAAGATACCTGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
CDS TCA 72 bp ACCTCCAGATATCAGGTATCTTTGGTCATACCGAGCTaGGACCTGATGGGGATACAGCAGGCACGTGACTTT +
Preference number: 6 (lower is better)
Translates to: TSRYQVSLVIPS*DLMGIQQARDF
Trigger: AAAGTCACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAAAGATACCTGATATCTGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
CDS CCA 72 bp CTGAGAGCGGATGATGCTCATGGAGCTGATCCAGTCTaGAGAGATCTTCGATACCAAGGAATACAACACCTC +
Preference number: 6 (lower is better)
Translates to: LRADDAHGADPV*RDLRYQGIQHL
Trigger: GAGGTGTTGTATTCCTTGGTATCGAAGATCTCTCCAGACTGGATCAGCTCCATGAGCATCATCCGCTCTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CAA 72 bp GTCAACAGTATTGACGAAATGCAATGTGTGGGTGCTTaGCGGCCCCAAAGAACAATGGGCAGAACTAGGCTG +
Preference number: 6 (lower is better)
Translates to: VNSIDEMQCVGA*RPQRTMGRTRL
Trigger: CAGCCTAGTTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CAA 72 bp CAGTTACAATTGTGCCCCCATCATCTGTCAACAGTATaGACGAAATGCAATGTGTGGGTGCTTTGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: QLQLCPHHLSTV*TKCNVWVLCGP
Trigger: GGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATGGGGGCACAATTGTAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp AGTTACAATTGTGCCCCCATCATCTGTCAACAGTATTaGCGAAATGCAATGTGTGGGTGCTTTGCGGCCCCA +
Preference number: 6 (lower is better)
Translates to: SYNCAPIICQQY*RNAMCGCFAAP
Trigger: TGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATGGGGGCACAATTGTAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 72 bp TCAACAGTATTGACGAAATGCAATGTGTGGGTGCTTTaGGGCCCCAAAGAACAATGGGCAGAACTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: STVLTKCNVWVL*GPKEQWAELGC
Trigger: ACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 72 bp TTGTGCCCCCATCATCTGTCAACAGTATTGACGAAATaGAATGTGTGGGTGCTTTGCGGCCCCAAAGAACAA +
Preference number: 6 (lower is better)
Translates to: LCPHHLSTVLTK*NVWVLCGPKEQ
Trigger: TTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATGGGGGCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp TTAAGAGGTTCGTTGCTGTTGGGAATCACACTTAGCTaGTCGATAATTCCAGCAGGGCAAGGCTTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: LRGSLLLGITLS*SIIPAGQGFSL
Trigger: CAAGCTGAAGCCTTGCCCTGCTGGAATTATCGATCAGCTAAGTGTGATTCCCAACAGCAACGAACCTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp CATCATCTGTCAACAGTATTGACGAAATGCAATGTGTaGGTGCTTTGCGGCCCCAAAGAACAATGGGCAGAA +
Preference number: 6 (lower is better)
Translates to: HHLSTVLTKCNV*VLCGPKEQWAE
Trigger: TTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGTCAATACTGTTGACAGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp TCTACCGAAACATCCCAGAGACATATTTGTCCATCGTaGCATCCAGTTACAATTGTGCCCCCATCATCTGTC +
Preference number: 6 (lower is better)
Translates to: STETSQRHICPS*HPVTIVPPSSV
Trigger: GACAGATGATGGGGGCACAATTGTAACTGGATGCCACGATGGACAAATATGTCTCTGGGATGTTTCGGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp GCGCAGGCTTTTGACAAACAAGTGATGGATGCTGTGTaGCCAAATAACAGTGCTCGGGGATTAACTTCTAGT +
Preference number: 6 (lower is better)
Translates to: AQAFDKQVMDAV*PNNSARGLTSS
Trigger: ACTAGAAGTTAATCCCCGAGCACTGTTATTTGGCCACACAGCATCCATCACTTGTTTGTCAAAAGCCTGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CCA 72 bp AGATCTTCGATACCAAGGAATACAACACCTCAAGGCTaGTGGCATCCACAACGAGGATTTCAGGGTAATGTC +
Preference number: 6 (lower is better)
Translates to: RSSIPRNTTPQG*WHPQRGFQGNV
Trigger: GACATTACCCTGAAATCCTCGTTGTGGATGCCACCAGCCTTGAGGTGTTGTATTCCTTGGTATCGAAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 72 bp GGTTTGGATTCCTCCTCAAATATTGGCTCAGTATCCTaGATTCCACTCATTTCAGAGGTGACAATCCACACC +
Preference number: 6 (lower is better)
Translates to: GLDSSSNIGSVS*IPLISEVTIHT
Trigger: GGTGTGGATTGTCACCTCTGAAATGAGTGGAATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS GCA 72 bp GACATATTTGTCCATCGTGGCATCCAGTTACAATTGTaGCCCCATCATCTGTCAACAGTATTGACGAAATGC +
Preference number: 6 (lower is better)
Translates to: DIFVHRGIQLQL*PHHLSTVLTKC
Trigger: GCATTTCGTCAATACTGTTGACAGATGATGGGGGCACAATTGTAACTGGATGCCACGATGGACAAATATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp AAACACCCTCCAGTATTTGGAGCATACGACCAAAAGTaGCCTCTGTGTGAATGCACAAAAAGAGATGCTTTG +
Preference number: 6 (lower is better)
Translates to: KHPPVFGAYDQK*PLCECTKRDAL
Trigger: CAAAGCATCTCTTTTTGTGCATTCACACAGAGGTCACTTTTGGTCGTATGCTCCAAATACTGGAGGGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS CAA 72 bp TCTGACAATAAATTGGTTTGGATTCCTCCTCAAATATaGGCTCAGTATCCTGCATTCCACTCATTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: SDNKLVWIPPQI*AQYPAFHSFQR
Trigger: CCTCTGAAATGAGTGGAATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAACCAATTTATTGTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp ATGTTCCAGATATTTAACCTTCCAGAAGAATCGCCCTaGATTAGTAGCTTATGCAAATATTCCTTGCATCCG +
Preference number: 6 (lower is better)
Translates to: MFQIFNLPEESP*ISSLCKYSLHP
Trigger: CGGATGCAAGGAATATTTGCATAAGCTACTAATTCAGGGCGATTCTTCTGGAAGGTTAAATATCTGGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2
ENSMUST00000236956.2
CDS TCA 72 bp TATGTTTCATTTCTCCAGAAAATATGTCCCAAATTATaGCGGAAAAATCCACACCTCCAGATATCAGGTATC +
Preference number: 6 (lower is better)
Translates to: YVSFLQKICPKL*RKNPHLQISGI
Trigger: GATACCTGATATCTGGAGGTGTGGATTTTTCCGTCATAATTTGGGACATATTTTCTGGAGAAATGAAACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072726.7
ENSMUST00000235648.2
ENSMUST00000236879.2